BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951834

Length=226
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G63730.1 | Symbols: ATARI14, ARI14 | IBR domain-containing p...   261    2e-69


> AT5G63730.1 | Symbols: ATARI14, ARI14 | IBR domain-containing 
protein | chr5:25508100-25509706 REVERSE LENGTH=1521
Length=1521

 Score =  261 bits (141),  Expect = 2e-69
 Identities = 157/165 (95%), Gaps = 0/165 (0%)
 Strand=Plus/Plus

Query  21   ATGGAGCACGATCGAGGGAAACCCTACTCTGTTCTAACGAGAAATGAAATTAGCGTAAAG  80
            |||||| ||||| || ||| |||||||||||||||||||||||||||||||| |||||||
Sbjct  1    ATGGAGTACGATGGACGGAGACCCTACTCTGTTCTAACGAGAAATGAAATTACCGTAAAG  60

Query  81   ATGAAGAAACAGATCAATGAAATCTCTGACATCTTCTGCATATCAAAATCCGATGCGACC  140
            ||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct  61   ATGAAGAAACAGATCAATGAAATCTCTGACATCTTCTTCATATCAAACTCCGATGCGACC  120

Query  141  GTACTTCTTATGTATCTCCGATGGGATTCGCTTCGTGTTTCAGAG  185
            |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct  121  GTACTTCTTATGTATCTCCGATGGGACTCGCTTCGTGTTTCAGAG  165



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10154085298


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5