BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951842

Length=225
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G61610.1 | Symbols:  | Galactose mutarotase-like superfamily...   211    2e-54


> AT3G61610.1 | Symbols:  | Galactose mutarotase-like superfamily 
protein | chr3:22799027-22801205 FORWARD LENGTH=1583
Length=1583

 Score =  211 bits (114),  Expect = 2e-54
 Identities = 118/120 (98%), Gaps = 0/120 (0%)
 Strand=Plus/Plus

Query  23   aaATTGAAAATGGGTCATTACGCAACAGTGTGGGATCAAAAAGAAGCAAGTGAGATAATC  82
            ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct  445  AAATTGAAAATGGGTCAATATGCAACAGTGTGGGATCAAAAAGAAGCAAGTGAGATAATC  504

Query  83   AAAGATTGGAATGGCGTTGACCAAGTCCTTCTCAGAAACCCACATGGTGCTTCTGCCAAG  142
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  505  AAAGATTGGAATGGCGTTGACCAAGTCCTTCTCAGAAACCCACATGGTGCTTCTGCCAAG  564


 Score = 95.3 bits (51),  Expect = 2e-19
 Identities = 57/60 (95%), Gaps = 0/60 (0%)
 Strand=Plus/Plus

Query  140  AAGGCTATATTCAAACCTCCTAAATCAATGCGTGGAGGGATTCAGATTTGTTATCCTCAG  199
            ||||||||||||||||| || ||||||||||||||||||||||||||||||||||| |||
Sbjct  637  AAGGCTATATTCAAACCCCCAAAATCAATGCGTGGAGGGATTCAGATTTGTTATCCGCAG  696



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 10103817549


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5