BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951908

Length=331
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fam...   130    9e-30


> AT3G04650.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family 
protein | chr3:1261984-1264622 FORWARD LENGTH=1773
Length=1773

 Score =  130 bits (70),  Expect = 9e-30
 Identities = 81/86 (94%), Gaps = 2/86 (2%)
 Strand=Plus/Plus

Query  215   AGTTAGAGCTGGGATGCTTCAAGGTGTGGAAATCGCATTGGGGTTGCCTGAAGGCTCGA-  273
             ||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||| | 
Sbjct  1104  AGTTAAAGCCGGGATGCTTCAAGGTGTGGAAATCGCATTGGGGTTGCCTGAAGGCTC-AC  1162

Query  274   TTCCTAAACCCGTTTATACACGTCTC  299
             |||||||||| |||||||||||||||
Sbjct  1163  TTCCTAAACCGGTTTATACACGTCTC  1188



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 15432198943


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5