BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951976

Length=191
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT5G58810.1 | Symbols:  | subtilisin-like serine protease, pseu...  93.5    6e-19


> AT5G58810.1 | Symbols:  | subtilisin-like serine protease, pseudogene, 
contains similarity to prepro-cucumisin GI:807698 
from (Cucumis melo); non-consensus acceptor site AA at exon 
6; blastp match of 43% identity and 2.1e-113 P-value to GP|13325079|gb|AAD02075.3||AF036960 
subtilisin-like protease C1 
{Glycine max} | chr5:23747962-23750853 FORWARD LENGTH=2892
Length=2892

 Score = 93.5 bits (50),  Expect = 6e-19
 Identities = 50/50 (100%), Gaps = 0/50 (0%)
 Strand=Plus/Plus

Query  112  GTGTATGTTGTCTACATGGGTTCACTTCCGTCTCAACCGGACTACAAACC  161
            ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  203  GTGTATGTTGTCTACATGGGTTCACTTCCGTCTCAACCGGACTACAAACC  252



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 8450626968


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5