BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg951999

Length=375
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G03350.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfam...   518    2e-146


> AT3G03350.2 | Symbols:  | NAD(P)-binding Rossmann-fold superfamily 
protein | chr3:791183-794812 FORWARD LENGTH=1429
Length=1429

 Score =  518 bits (280),  Expect = 2e-146
 Identities = 329/352 (93%), Gaps = 5/352 (1%)
 Strand=Plus/Plus

Query  1    TTTCCCATTAATCAT-A-AATCATGATCATGATGAAACTTAAACCTCTGGTTATAGTGTT  58
            ||||||||||||||| | ||||||||||||||||||||||||||||||| || |||| ||
Sbjct  24   TTTCCCATTAATCATAATAATCATGATCATGATGAAACTTAAACCTCTGATTCTAGTCTT  83

Query  59   TTTCTCCATGTTCCTCGTGTTACACTATCTCACTAATCAAGCCAATTCCGATTCTT-CC-  116
            |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || 
Sbjct  84   TTTCTCAATGTTCCTCGTGTTACACTATCTCACTAATCAAACCAATTCCGATTCTTACCT  143

Query  117  C-TAGAACATACCGGAATTACAACTCCGTTGCCGCCACCGCCACCAAGAAAGACTTACTG  175
            |  || |||||||||||||||||||||||||| |||||| |||||||||||||| |||||
Sbjct  144  CGGAGGACATACCGGAATTACAACTCCGTTGCGGCCACCACCACCAAGAAAGACATACTG  203

Query  176  CAGTAGGTCATCTTCATCTCCACCTCCGCCTAAATACATGTATGTGACCGGTGTGCCTGG  235
            ||| | |||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct  204  CAGCAAGTCATCTTCATCTCCACCTCCGCCGAAATACATGTATGTAACCGGTGTGCCTGG  263

Query  236  GGAACTCTACCGGACCGAGCCAGACGACCAATGGGGATATTATTCTAGTGTAAACCGGAA  295
            |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||| ||
Sbjct  264  GGAACTCTACCGGACCGAGCCAGATGACCAATGGGGATATAATTCTAGTGTAAACCGAAA  323

Query  296  TCTGGTTAAGTGTCTCATGGTTATTGTAATTGTGGGGTTTGGAGTTATAAAT  347
            |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  324  TCTGGTTAAGTGTCTCTTGGTTATTGTAATTGTGGGGTTTGGAGTTATAAAT  375



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 17643979899


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5