BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952040 Length=1834 Score E Sequences producing significant alignments: (Bits) Value AT1G49340.2 | Symbols: ATPI4K ALPHA | Phosphatidylinositol 3- a... 1989 0.0 AT1G51040.1 | Symbols: | Protein kinase superfamily protein | ... 821 0.0 > AT1G49340.2 | Symbols: ATPI4K ALPHA | Phosphatidylinositol 3- and 4-kinase family protein | chr1:18252355-18264462 FORWARD LENGTH=6582 Length=6582 Score = 1989 bits (1077), Expect = 0.0 Identities = 1581/1826 (87%), Gaps = 27/1826 (1%) Strand=Plus/Plus Query 1 ATCATCCTGTCTGGGGTAAAATGGACAGCTATGCAGTGGGAAAGGAGAAGAGGAAGCAAC 60 ||||||| ||||||||| | ||||||| ||| | ||||||| || || |||||||| Sbjct 4277 ATCATCCCGTCTGGGGTGAGATGGACAACTACACTCTGGGAAAAGAAAAAAGGAAGCAGT 4336 Query 61 TGCTTCTGATTCTTTGCCAACATGAATCTGATAGGCTTGATGTTTGGGCACAACCTATTA 120 ||||| | || || ||||| |||||| |||| |||||||| ||||||||||||||||||| Sbjct 4337 TGCTTTTAATGCTCTGCCAGCATGAAGCTGACAGGCTTGACGTTTGGGCACAACCTATTA 4396 Query 121 GTTCAAAGAACAGTCCTCCATATTCACGGCTAAAAATAAGCTCTGGGAAATGGACTGAAC 180 |||||||| |||| ||| ||||| ||||| ||||||||||||| ||||||||| ||| Sbjct 4397 GTTCAAAGGACAG---TCCGTATTCGCGGCTGAAAATAAGCTCTGAGAAATGGACCGAAT 4453 Query 181 ATGCTAAAACTGCCTTTTCAGTGGATCCAAGGATTGCTCTATCA-TTAGCTTCAAGATTT 239 |||||||||| ||||||||||||||||| | |||||| ||||| || || ||||||||| Sbjct 4454 ATGCTAAAACGGCCTTTTCAGTGGATCCTCGCATTGCTTTATCAGTT-GCCTCAAGATTT 4512 Query 240 CCAGCAAAT-ATTGCTGTGAAATCCCAAGTCACTCAGCTAGTTCAGGCTCATATAGTAGA 298 || |||||| || |||||||||| ||||||||||||| |||||| | |||||||||| Sbjct 4513 CCGGCAAATGCTT-CTGTGAAATCTGAAGTCACTCAGCTGGTTCAGACAAATATAGTAGA 4571 Query 299 TCTTCGTACAATTCCTGAGGCGTTGCCATATTTTGTCACACCTAAAAGCGTTGAAGAGAA 358 ||||||||||||||||||||| ||||| |||||||| ||||| |||| ||||||||||| Sbjct 4572 TCTTCGTACAATTCCTGAGGCATTGCCGTATTTTGTTACACCGAAAAATGTTGAAGAGAA 4631 Query 359 CTCAGTGCTGTTGCGA-CAGCTGCCTCATTGGGCTGCTTGTTCAATTACACAGGCTCTTG 417 |||||||||||||| | ||||| || || ||||||||||||||||||||||||||||||| Sbjct 4632 CTCAGTGCTGTTGC-AGCAGCTACCGCACTGGGCTGCTTGTTCAATTACACAGGCTCTTG 4690 Query 418 AGTTCCTCACTCCTACTTATAAGGGACATCCTCGTGTCATGGCATATGTCCTGCGAGTTT 477 |||||||||| ||| |||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 4691 AGTTCCTCACGCCTGCTTATAAGGGACATCCACGTGTCATGGCATATGTCCTACGAGTTT 4750 Query 478 TAGAGTCCTACCCCCCTGAGCGAGTCACTTTCTTCATGCCACAGTTAGTGCAGTCTCTGC 537 ||||||||||||| ||||| ||||| ||||| |||||||| ||||| ||||||||| ||| Sbjct 4751 TAGAGTCCTACCCTCCTGAACGAGTTACTTTTTTCATGCCGCAGTTGGTGCAGTCTTTGC 4810 Query 538 GCTATGATGAAGGGAGGCTGGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACA 597 |||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 4811 GCTATGATGATGGGAGGCTAGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACA 4870 Query 598 TATTTGCTCATATCCTCACGTGGCATTTGCAGGGTGAGTCTGTTCAGGAAACTGTGAAAG 657 ||||||| || || |||| ||||||||||| |||||| ||| ||||||||| ||| | Sbjct 4871 TATTTGCCCACATTCTCATTTGGCATTTGCAAGGTGAGGATGTGCAGGAAACTCCGAAGG 4930 Query 658 ATGGTGCTTTCGATAAGAATACATCATTCCAAGCAATCTTGTCAGAGGTTCGACAGCATA 717 ||||| || ||||||||||| | ||||||||| ||| ||| || ||||||| ||||||| Sbjct 4931 ATGGTTCTATCGATAAGAATGCGGCATTCCAAGAAATTTTGCCACAGGTTCGGCAGCATA 4990 Query 718 TCATTGATGGTTTTAGTCCAAAGGCCTTGGACATGTTCAAAAGAGAGTTTGACTTCTTTG 777 ||||||||||||| || || || |||||||||||||||| ||||||||||||||||||| Sbjct 4991 TCATTGATGGTTTCAGCCCCAACGCCTTGGACATGTTCACTAGAGAGTTTGACTTCTTTG 5050 Query 778 AAAAGGTTACATCTATTTCTGGGGCATTGTTTCCTCTTCCAAAGGAAGAACGAAGAGCTG 837 | |||||||| ||||| ||||||| || || |||||||||||||||||||| ||||| | Sbjct 5051 ACAAGGTTACTTCTATATCTGGGGTGTTATTCCCTCTTCCAAAGGAAGAACGCAGAGCCG 5110 Query 838 GTATCAGGAGGGAGTTGGAGAAAATCAAAATGCAAGGAGAAGACCTTTATTTGCCTACGG 897 |||| |||||||||||||||||||| ||||||| ||||| |||||||||||||| || | Sbjct 5111 GTATTAGGAGGGAGTTGGAGAAAATTGAAATGCAGGGAGATGACCTTTATTTGCCAACTG 5170 Query 898 CTCCTAACAAGCTTGTTAAGGGTATCCA-GATAGACAGTGGCATAACCCTT-CAATCAGC 955 |||||||||||||||||| |||||||| | |||||||||| ||| ||||| |||||||| Sbjct 5171 CTCCTAACAAGCTTGTTAGGGGTATCCGTG-TAGACAGTGGAATA-CCCTTACAATCAGC 5228 Query 956 TGCCAAAGTCCCTATCATGATAACCTTTAACGTTGTTGATCGTGATGGTAACCAGAATGA 1015 |||||||||||||||||||||||| ||||||||| |||||||||||||| |||| | ||| Sbjct 5229 TGCCAAAGTCCCTATCATGATAACTTTTAACGTTATTGATCGTGATGGTGACCACAGTGA 5288 Query 1016 TGCGAAACCACAGGCTTGTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGC 1075 || |||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 5289 TGTAAAACCACAGGCTTGCATTTTCAAGGTTGGAGATGATTGCCGGCAAGATGTTCTTGC 5348 Query 1076 CCTTCAAGTGATATCGCTTCTTAGAGACATATTTCAAGCGGTTGGTCTTAATCTTTATCT 1135 ||||||||||||||| ||||||||||||||||||||||| | ||||||||| |||||||| Sbjct 5349 CCTTCAAGTGATATCTCTTCTTAGAGACATATTTCAAGCAGCTGGTCTTAACCTTTATCT 5408 Query 1136 TTTTCCTTATGGAGTACTTCCAACTGGGGCAGGGAGGGGG-ATAATCGAGGTAGTGCCAA 1194 |||||| ||||||||||| |||||||| || || | |||| ||||| ||||| ||||| | Sbjct 5409 TTTTCCATATGGAGTACTCCCAACTGGTGC-GGAAAGGGGCATAATTGAGGTGGTGCCTA 5467 Query 1195 ATACACGAAGCAGAAGTCAAATGGGTGA-ATCAACCGATGGTGGCTTGTATGAGATCTTT 1253 ||||| |||||||||||||||||||||| | | || || || || ||||||||||| ||| Sbjct 5468 ATACAAGAAGCAGAAGTCAAATGGGTGAGA-CTACTGACGGGGGTTTGTATGAGATTTTT 5526 Query 1254 CAAGAGGAGTTTGGACCCGTTGGCTCACCCTCCTTTGAAACGGCAAGGG-GTAACTTCCT 1312 ||| | || | ||||||||| |||||| || |||||||||| ||| ||| | |||||||| Sbjct 5527 CAACAAGACTATGGACCCGTCGGCTCAACCACCTTTGAAACAGCACGGGAG-AACTTCCT 5585 Query 1313 CACCAGCAGTGCTGGTTACGCGGTGGCGAGTCTTTTACTCCAGTCCAAAGACAGACACAA 1372 || ||| ||||| ||||| || ||||| ||||||||||||||| |||||||||||||||| Sbjct 5586 CATCAGTAGTGCCGGTTATGCAGTGGCTAGTCTTTTACTCCAGCCCAAAGACAGACACAA 5645 Query 1373 CGGCAATCTCCTCTACGACAACATGGGAAGGCTTGTTCACATTGATTTTGGTTTCATTTT 1432 || |||||||||| ||| || ||||||| ||||| ||||| || |||||||||||||| Sbjct 5646 TGGAAATCTCCTCTTCGATGACGTGGGAAGACTTGTCCACATCGACTTTGGTTTCATTTT 5705 Query 1433 TGAAACCTCCCCTGGTGGAAACATGCGTTTTGAGAGCGCACATTTCAAACTGAGCCACGA 1492 ||||| || |||||||| |||||||| || ||||| || |||||||||||||||||||| Sbjct 5706 GGAAACTTCGCCTGGTGGGAACATGCGATTCGAGAGTGCTCATTTCAAACTGAGCCACGA 5765 Query 1493 AATGACACAGTTGCTTGATCCATCAGGGAAT-ATGAAGAGCGAATCTTGGCATCAGTTTG 1551 |||||| |||||||| ||||| || ||| | ||||| ||| || | ||||||||||||| Sbjct 5766 AATGACTCAGTTGCTAGATCCCTC-GGGTGTTATGAAAAGCAAAACATGGCATCAGTTTG 5824 Query 1552 TGAGCTTGTGCGTGAAGGGTTACTTGGCTGCTCGCCGGTACATGGAGGGGATCATCAGTA 1611 ||||||||||||| ||||| ||||| |||||||| ||| | ||||| || |||||||| | Sbjct 5825 TGAGCTTGTGCGTCAAGGGGTACTTAGCTGCTCGGCGGCAGATGGATGGAATCATCAGCA 5884 Query 1612 CAGTGGAAATGATGGTGGAAAGTGGATTGCCTTGCTTCAGCAGAGGAGATCCAATTGAGA 1671 | ||| |||||||| | |||||||| ||||||||||| ||||||||||||||||||| | Sbjct 5885 CGGTGCAAATGATGCTAGAAAGTGGGTTGCCTTGCTTTAGCAGAGGAGATCCAATTG-GT 5943 Query 1672 AA-CTTCGCAAGAGATTTCATCCC-GAGATGAGTGAGCGTGAAGCCGCACACTTCATGAT 1729 || ||| | || |||||||| ||| || ||||| || |||||||| |||||||||||||| Sbjct 5944 AATCTTAGGAAAAGATTTCA-CCCAGAAATGAGCGAACGTGAAGCTGCACACTTCATGAT 6002 Query 1730 CCATGTCTGTACCGATGCCTACAACAAATGGACCAC-GTATGGGTACGACTTGATACAGT 1788 ||||| ||||| || || || ||||| ||||| || | ||| ||||||||||| |||| Sbjct 6003 TCATGTATGTACGGACGCATATAACAAGTGGACTACTGC-TGGATACGACTTGATTCAGT 6061 Query 1789 ATCTGCAACAAGGCATCGAGAAATAA 1814 || ||||||||||||||||||| ||| Sbjct 6062 ATTTGCAACAAGGCATCGAGAAGTAA 6087 > AT1G51040.1 | Symbols: | Protein kinase superfamily protein | chr1:18920658-18923314 FORWARD LENGTH=1578 Length=1578 Score = 821 bits (444), Expect = 0.0 Identities = 555/609 (91%), Gaps = 6/609 (1%) Strand=Plus/Plus Query 556 TGGTTGAAGGGTATCTTCTTAGAGCTACCCAAAGAAGTGACATATTTGCTCATATCCTCA 615 |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct 344 TGGTTGAAGGGTATCTTCTTAGAGCTGCCCAAAGAAGTGACATATTTGCTCATACCCTCA 403 Query 616 CGTGGCATTTGCAGGGTGAGTCTGTTCAGGAAACT-GTGAAAGATGGTGCTTTCGATAAG 674 |||||||| ||||||||||||||| |||||| | |||||||||||||||||||||||| Sbjct 404 TTTGGCATTTACAGGGTGAGTCTGTTGAGGAAA-TAGTGAAAGATGGTGCTTTCGATAAG 462 Query 675 AATACATCATTCCAAGCAATCTTGTCAGAGGTTCGACAGCATATCATTGATGGTTTTAGT 734 ||| |||||||||||| |||||||||||| ||||| ||||||||| |||||||||| | | Sbjct 463 AATGCATCATTCCAAGAAATCTTGTCAGACGTTCGGCAGCATATCGTTGATGGTTTCACT 522 Query 735 CCAAAGGCCTTGGACATGTTCAAAAGAGAGTTTGACTTCTTTGAAAAGGTTACATCTATT 794 || ||||||||| | | |||| |||||||||||||||||||||||||| ||||||||| Sbjct 523 CCCAAGGCCTTGAATTTTTTCAGTAGAGAGTTTGACTTCTTTGAAAAGGTCACATCTATT 582 Query 795 TCTGGGGCATTGTTTCCTCTTCCAAAGGAAGAACGAAG-AGCTGGTATCAGGAGGGAGTT 853 ||||||||||| |||||||||||||||||||||| || ||||||||| |||||||| || Sbjct 583 TCTGGGGCATTACTTCCTCTTCCAAAGGAAGAACG-AGTAGCTGGTATTAGGAGGGAATT 641 Query 854 GGAGAAAATCAAAATGCAAGGAGAAGACCTTTATTTGCCTACGGCTCCTAACAAGCTTGT 913 ||||||||||||||||||||||||||| |||||| |||| || |||||||||||||| | Sbjct 642 GGAGAAAATCAAAATGCAAGGAGAAGATCTTTATCTGCCGACTGCTCCTAACAAGCTCG- 700 Query 914 TAAGGG-TATCCAGATAGACAGTGGCATAACCCTTCAATCAGCTGCCAAAGTCCCTATCA 972 | |||| ||| ||| |||||||||| ||| |||| ||||||||||||||||||||||||| Sbjct 701 TCAGGGTTATTCAGGTAGACAGTGGAATACCCCTACAATCAGCTGCCAAAGTCCCTATCA 760 Query 973 TGATAACCTTTAACGTTGTTGATCGTGATGGTAACCAGAATGATGCGAAACCACAGGCTT 1032 |||||||||||||||||||||||| ||||||| |||| ||||||| |||||| || |||| Sbjct 761 TGATAACCTTTAACGTTGTTGATCTTGATGGTGACCACAATGATGTGAAACCTCAAGCTT 820 Query 1033 GTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGCCCTTCAAGTGATATCGC 1092 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 821 GTATTTTCAAGGTTGGAGATGATTGCCGTCAAGATGTTCTTGCCCTGCAAGTGATATCTC 880 Query 1093 TTCTTAGAGACATATTTCAAGCGGTTGGTCTTAATCTTTATCTTTTTCCTTATGGAGTAC 1152 ||||| |||||||||||||||| |||||||||||||| ||||||||||| |||||||||| Sbjct 881 TTCTTGGAGACATATTTCAAGCTGTTGGTCTTAATCTCTATCTTTTTCCATATGGAGTAC 940 Query 1153 TTCCAACTG 1161 ||||||||| Sbjct 941 TTCCAACTG 949 Score = 593 bits (321), Expect = 2e-168 Identities = 530/632 (84%), Gaps = 10/632 (2%) Strand=Plus/Plus Query 1188 GTGCCAAATACACGAAGCAGAAGTCAAATGGGTGAATCAACCGATGGTGGCTTGTATGAG 1247 |||||||||||||||||||||||||||||||||||| ||||||| || || ||||||||| Sbjct 952 GTGCCAAATACACGAAGCAGAAGTCAAATGGGTGAAACAACCGACGGGGGTTTGTATGAG 1011 Query 1248 ATCTTTCAAGAGGAGTTTGGACCCGTTGGCTCACCCTCCTTTGAAACGGCAAGGG-GTAA 1306 || |||||| | | | ||||| |||||||||| || |||||||||| ||| | | | || Sbjct 1012 ATTTTTCAACAAAACTATGGACTCGTTGGCTCAACCACCTTTGAAACAGCACGAGCG-AA 1070 Query 1307 CTTCCTCACCAGCAGTGCTGGTTACGCGGTGGCGAGTCTTTTACTCCAGTCCAAAGACAG 1366 |||||||| |||||||| || || || ||||| ||||||||||||||| ||||||| || Sbjct 1071 CTTCCTCATAAGCAGTGCCGGGTATGCTGTGGCTAGTCTTTTACTCCAGCCCAAAGATAG 1130 Query 1367 ACACAACGGCAATCTCCTCTACGACAACATGGGAAGGCTTGTTCACATTGATTTTGGTTT 1426 ||||||||| |||||||| | ||| || ||||||| ||||| ||||| || |||||||| Sbjct 1131 ACACAACGGAAATCTCCTTTTCGATGACGTGGGAAGACTTGTCCACATCGACTTTGGTTT 1190 Query 1427 CATTTTTGAAACCTCCCCTGGTGGAAACATGCGTTTTGAGAGCGCACATTTCAAACTGAG 1486 |||||| ||||| || ||||||||||||||| | || || | || |||||||||||||| Sbjct 1191 CATTTTGGAAACTTCACCTGGTGGAAACATGAGGTTCGAAAATGCTCATTTCAAACTGAG 1250 Query 1487 CCACGAAATGACACAGTTGCTTGATCCATCAGG-GAATATGAAGAGCGAATCTTGGCATC 1545 |||||||||||| |||||||| ||||| ||||| | |||||| ||| || | ||||||| Sbjct 1251 CCACGAAATGACCCAGTTGCTAGATCCTTCAGGTGT-TATGAAAAGCAAAACATGGCATC 1309 Query 1546 AGTTTGTGAGCTTGTGCGTGAAGGGTTACTTGGCTGCTCGCCGGTACATGGAGGGGATCA 1605 ||||||||||||||||||| ||||| ||||| |||||||||||||||||||| | |||| Sbjct 1310 AGTTTGTGAGCTTGTGCGTCAAGGGATACTTAGCTGCTCGCCGGTACATGGACGAAATCA 1369 Query 1606 TCAGTACAGTGGAAATGATGGTGGAAAGTGGATTGCCTTGCTTCAGCAGAGGAGATCCAA 1665 | || || ||| |||||||| | |||||||||||||||||||| |||||||||||||||| Sbjct 1370 TTAGCACGGTGCAAATGATGCTAGAAAGTGGATTGCCTTGCTTTAGCAGAGGAGATCCAA 1429 Query 1666 TTGAGAAA-CTTCGCAAGAGATTTCATCCC-GAGATGAGTGAGCGTGAAGCCGCACACTT 1723 | | | || ||| | || ||||| || ||| || ||||| || |||||||| |||| ||| Sbjct 1430 TAG-GTAATCTTAGGAAAAGATTCCA-CCCAGAAATGAGCGAACGTGAAGCTGCACTCTT 1487 Query 1724 CATGATCCATGTCTGTACCGATGCCTACAACAAATGGACCAC-GTATGGGTACGACTTGA 1782 ||||| |||| ||||||||||| || ||||||||||| || | ||| || ||||||| Sbjct 1488 TATGATTAATGTATGTACCGATGCTTATAACAAATGGACTACTGC-TGGATATGACTTGA 1546 Query 1783 TACAGTATCTGCAACAAGGCATCGAGAAATAA 1814 | |||||| ||||||||||| | ||||| ||| Sbjct 1547 TTCAGTATTTGCAACAAGGCGTTGAGAAGTAA 1578 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90762585360 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5