BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952058 Length=207 Score E Sequences producing significant alignments: (Bits) Value AT4G36130.1 | Symbols: | Ribosomal protein L2 family | chr4:17... 233 4e-61 > AT4G36130.1 | Symbols: | Ribosomal protein L2 family | chr4:17097565-17098879 FORWARD LENGTH=1048 Length=1048 Score = 233 bits (126), Expect = 4e-61 Identities = 138/144 (96%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19 AGGATGAAGTTGTCATCGGGTTCGAAGAAGATTGTGCCAAGTGGATGCATGGCCATGATT 78 ||||| |||||| |||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 487 AGGATTAAGTTGCCATCGGGTTCGAAGAAGATTGTGCCAAGTGGATGCAGGGCCATGATT 546 Query 79 GGTCAAGTTGCAGGTGGTGGAAGAACTGAGAAGCCGATGCTAAAGGCTGGTAACACATAC 138 |||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||| Sbjct 547 GGTCAAGTTGCAGGTGGTGGAAGAACAGAGAAGCCGATGCTCAAGGCTGGTAACGCATAC 606 Query 139 CACAAGTACCGTGTGAAGAGAAAC 162 |||||||||||||||||||||||| Sbjct 607 CACAAGTACCGTGTGAAGAGAAAC 630 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9255448584 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5