BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952099 Length=1228 Score E Sequences producing significant alignments: (Bits) Value AT4G14670.1 | Symbols: CLPB2 | casein lytic proteinase B2 | chr... 355 5e-97 > AT4G14670.1 | Symbols: CLPB2 | casein lytic proteinase B2 | chr4:8410054-8412557 FORWARD LENGTH=1872 Length=1872 Score = 355 bits (192), Expect = 5e-97 Identities = 243/267 (91%), Gaps = 6/267 (2%) Strand=Plus/Plus Query 248 TTGTTGTACAAGACGAAGCCGTGAAAGCTGTAGCTGCGGCAATTCTAAGGTCAAGGGTTG 307 |||||| |||||||||||| ||||||||||| ||||| ||||| |||||||| ||||||| Sbjct 1607 TTGTTGGACAAGACGAAGCTGTGAAAGCTGTGGCTGCTGCAATACTAAGGTCGAGGGTTG 1666 Query 308 GACTAGGAAGGCCACAACAACCATCTGGTTCCTTTCTTTTCCTCGGTCCAACTGGTGTTG 367 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1667 GACTAGGAAGGCCACAACAACCGTCTGGTTCCTTTCTCTTCCTCGGTCCAACTGGTGTTG 1726 Query 368 GTAAAACTGAGCTGGCTAAGGCTCTTGCTGAGCAACTCTTTTACGA-TGAAAACCTACTC 426 ||||||| ||||||||||||||||| ||||||||||||||| || | ||||||||||||| Sbjct 1727 GTAAAACCGAGCTGGCTAAGGCTCTGGCTGAGCAACTCTTTGAC-AGTGAAAACCTACTC 1785 Query 427 GTTAGGCTTGATATGTCGGAGTATATTGATAGATACACTGTTAGTAAACTTATAGGGGCA 486 ||||||||||||||||||||||||| ||| | || | |||||| |||||||||||||||| Sbjct 1786 GTTAGGCTTGATATGTCGGAGTATAATGACAAATTCTCTGTTAATAAACTTATAGGGGCA 1845 Query 487 CCAGCTGG----GTACATTGGTCATGA 509 ||| |||| ||||||||||||||| Sbjct 1846 CCACCTGGATACGTACATTGGTCATGA 1872 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 60341055090 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5