BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952122

Length=736
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT3G06570.1 | Symbols:  | Galactose oxidase/kelch repeat superf...   549    1e-155
  AT3G07170.1 | Symbols:  | Sterile alpha motif (SAM) domain-cont...   130    2e-29 
  AT3G06030.1 | Symbols: ANP3, MAPKKK12, NP3 | NPK1-related prote...   108    9e-23 
  AT4G11745.1 | Symbols:  | Galactose oxidase/kelch repeat superf...  58.4    1e-07 


> AT3G06570.1 | Symbols:  | Galactose oxidase/kelch repeat superfamily 
protein | chr3:2047305-2048553 REVERSE LENGTH=1249
Length=1249

 Score =  549 bits (297),  Expect = 1e-155
 Identities = 461/537 (86%), Gaps = 24/537 (4%)
 Strand=Plus/Plus

Query  194   GCCCTTCAATTGCAGCGAGACACAAGACAAGTTTTTCTCCTGCAGAACCGCATTTATTGA  253
             |||||||||||||||||||||| |||||||||||||   |||||||||||||||||||||
Sbjct  663   GCCCTTCAATTGCAGCGAGACAAAAGACAAGTTTTTAAACTGCAGAACCGCATTTATTGA  722

Query  254   CGAAAAGTTCCTCGTGATGCCTTTTG-CCCGTAGAGGGGTGATTGCTTACAATTCCAAGG  312
             || ||||||||||||||  || || |   | |||||||||| ||||||||||||||||||
Sbjct  723   CGGAAAGTTCCTCGTGAAACC-TTGGATTCATAGAGGGGTGGTTGCTTACAATTCCAAGG  781

Query  313   AAAGTAGATGGGACCCAGTTCAAACGAAGATGGCT-TGTATAATGTTGAAAGATTCGCAT  371
             ||||||||||||| || |||||||||||||||||| |||  | |||| || |||||  ||
Sbjct  782   AAAGTAGATGGGAACCGGTTCAAACGAAGATGGCTATGTCCA-TGTTTAATGATTCTTAT  840

Query  372   TGCCAGATAGGGAATGTTATGTA-TT-GTTCTGTTGACGGAAGGATCAGATGGTATGAC-  428
             |||||||||   |||||||| || || | | | |||||||||||||||||||||||||| 
Sbjct  841   TGCCAGATACACAATGTTATCTACTTAGCT-T-TTGACGGAAGGATCAGATGGTATGACG  898

Query  429   ACT-CAGGTAAGCAGTTGGAGATTGGTCAAGGGTTTGCTAGAACTAGGTAGCTTCCCTTG  487
             | | | | ||| | ||||| ||   ||| |||||||||||||||| |||| | |||||  
Sbjct  899   A-TGC-GCTAAACTGTTGGGGAGACGTCCAGGGTTTGCTAGAACTGGGTAACATCCCTCA  956

Query  488   TGGTCCTTTTTGTGTTAAATTGGCTGATTGTCGTGGAAAC-TTAGCCGTTTTCTGGGTCA  546
             |||||||| |||||||| ||||||||||| |||||||||| || || ||||||||| |||
Sbjct  957   TGGTCCTTCTTGTGTTAGATTGGCTGATTATCGTGGAAACATT-GCGGTTTTCTGGTTCA  1015

Query  547   AGAGT-TTT-CCTGATGAAGGTGATGAC--CAAA-GGAAGATGATTTTGTGTGCTGAGAT  601
              || | ||| |||||| ||  |||||||  |||| |||||||||||| |||||| |||||
Sbjct  1016  -GA-TATTTACCTGAT-AA--TGATGACTACAAATGGAAGATGATTTGGTGTGCCGAGAT  1070

Query  602   TGCGCTTGAAAGACGCACTAGTTTTGAGATTTGGGGGAAAGTTTTGTGGTTTGATCATGT  661
             |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||
Sbjct  1071  TGCGCTTGAAAGACGCACTAGTTGGGAGATTTGGGGGAAAGTTTTGTGGTTTGATCCTGT  1130

Query  662   TCTTACTGTCCCTGCAGATTATCAGTTAATCAAGGCTCTTGCTGCTACTGTTTGATC  718
             |||||||||||||||||||||| ||||  |||| |||||||||||||||||||||||
Sbjct  1131  TCTTACTGTCCCTGCAGATTATGAGTTTGTCAAAGCTCTTGCTGCTACTGTTTGATC  1187


> AT3G07170.1 | Symbols:  | Sterile alpha motif (SAM) domain-containing 
protein | chr3:2280194-2282339 FORWARD LENGTH=1088
Length=1088

 Score =  130 bits (70),  Expect = 2e-29
 Identities = 72/73 (99%), Gaps = 0/73 (0%)
 Strand=Plus/Plus

Query  122  AGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGATCTCAAGGCTAT  181
            |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct  729  AGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTAT  788

Query  182  GCTCATACCGATG  194
            |||||||||||||
Sbjct  789  GCTCATACCGATG  801


> AT3G06030.1 | Symbols: ANP3, MAPKKK12, NP3 | NPK1-related protein 
kinase 3 | chr3:1818740-1822840 REVERSE LENGTH=2246
Length=2246

 Score =  108 bits (58),  Expect = 9e-23
 Identities = 64/67 (96%), Gaps = 0/67 (0%)
 Strand=Plus/Plus

Query  57    AAGGATGTCTGTGAACTGGTAAGCTTGAGGAGTTTCAATATATACCCACAGAAGTCAAAT  116
             ||||||||||||||||||| |||||||||||||| || ||||||||||||||||||||||
Sbjct  1261  AAGGATGTCTGTGAACTGGGAAGCTTGAGGAGTTCCATTATATACCCACAGAAGTCAAAT  1320

Query  117   AACTCAG  123
             |||||||
Sbjct  1321  AACTCAG  1327


> AT4G11745.1 | Symbols:  | Galactose oxidase/kelch repeat superfamily 
protein | chr4:7075826-7076680 REVERSE LENGTH=855
Length=855

 Score = 58.4 bits (31),  Expect = 1e-07
 Identities = 33/34 (97%), Gaps = 0/34 (0%)
 Strand=Plus/Plus

Query  585  ATTTTGTGTGCTGAGATTGCGCTTGAAAGACGCA  618
            |||| |||||||||||||||||||||||||||||
Sbjct  718  ATTTGGTGTGCTGAGATTGCGCTTGAAAGACGCA  751



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 35716478517


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5