BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952122 Length=736 Score E Sequences producing significant alignments: (Bits) Value AT3G06570.1 | Symbols: | Galactose oxidase/kelch repeat superf... 549 1e-155 AT3G07170.1 | Symbols: | Sterile alpha motif (SAM) domain-cont... 130 2e-29 AT3G06030.1 | Symbols: ANP3, MAPKKK12, NP3 | NPK1-related prote... 108 9e-23 AT4G11745.1 | Symbols: | Galactose oxidase/kelch repeat superf... 58.4 1e-07 > AT3G06570.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr3:2047305-2048553 REVERSE LENGTH=1249 Length=1249 Score = 549 bits (297), Expect = 1e-155 Identities = 461/537 (86%), Gaps = 24/537 (4%) Strand=Plus/Plus Query 194 GCCCTTCAATTGCAGCGAGACACAAGACAAGTTTTTCTCCTGCAGAACCGCATTTATTGA 253 |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct 663 GCCCTTCAATTGCAGCGAGACAAAAGACAAGTTTTTAAACTGCAGAACCGCATTTATTGA 722 Query 254 CGAAAAGTTCCTCGTGATGCCTTTTG-CCCGTAGAGGGGTGATTGCTTACAATTCCAAGG 312 || |||||||||||||| || || | | |||||||||| |||||||||||||||||| Sbjct 723 CGGAAAGTTCCTCGTGAAACC-TTGGATTCATAGAGGGGTGGTTGCTTACAATTCCAAGG 781 Query 313 AAAGTAGATGGGACCCAGTTCAAACGAAGATGGCT-TGTATAATGTTGAAAGATTCGCAT 371 ||||||||||||| || |||||||||||||||||| ||| | |||| || ||||| || Sbjct 782 AAAGTAGATGGGAACCGGTTCAAACGAAGATGGCTATGTCCA-TGTTTAATGATTCTTAT 840 Query 372 TGCCAGATAGGGAATGTTATGTA-TT-GTTCTGTTGACGGAAGGATCAGATGGTATGAC- 428 ||||||||| |||||||| || || | | | |||||||||||||||||||||||||| Sbjct 841 TGCCAGATACACAATGTTATCTACTTAGCT-T-TTGACGGAAGGATCAGATGGTATGACG 898 Query 429 ACT-CAGGTAAGCAGTTGGAGATTGGTCAAGGGTTTGCTAGAACTAGGTAGCTTCCCTTG 487 | | | | ||| | ||||| || ||| |||||||||||||||| |||| | ||||| Sbjct 899 A-TGC-GCTAAACTGTTGGGGAGACGTCCAGGGTTTGCTAGAACTGGGTAACATCCCTCA 956 Query 488 TGGTCCTTTTTGTGTTAAATTGGCTGATTGTCGTGGAAAC-TTAGCCGTTTTCTGGGTCA 546 |||||||| |||||||| ||||||||||| |||||||||| || || ||||||||| ||| Sbjct 957 TGGTCCTTCTTGTGTTAGATTGGCTGATTATCGTGGAAACATT-GCGGTTTTCTGGTTCA 1015 Query 547 AGAGT-TTT-CCTGATGAAGGTGATGAC--CAAA-GGAAGATGATTTTGTGTGCTGAGAT 601 || | ||| |||||| || ||||||| |||| |||||||||||| |||||| ||||| Sbjct 1016 -GA-TATTTACCTGAT-AA--TGATGACTACAAATGGAAGATGATTTGGTGTGCCGAGAT 1070 Query 602 TGCGCTTGAAAGACGCACTAGTTTTGAGATTTGGGGGAAAGTTTTGTGGTTTGATCATGT 661 ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| Sbjct 1071 TGCGCTTGAAAGACGCACTAGTTGGGAGATTTGGGGGAAAGTTTTGTGGTTTGATCCTGT 1130 Query 662 TCTTACTGTCCCTGCAGATTATCAGTTAATCAAGGCTCTTGCTGCTACTGTTTGATC 718 |||||||||||||||||||||| |||| |||| ||||||||||||||||||||||| Sbjct 1131 TCTTACTGTCCCTGCAGATTATGAGTTTGTCAAAGCTCTTGCTGCTACTGTTTGATC 1187 > AT3G07170.1 | Symbols: | Sterile alpha motif (SAM) domain-containing protein | chr3:2280194-2282339 FORWARD LENGTH=1088 Length=1088 Score = 130 bits (70), Expect = 2e-29 Identities = 72/73 (99%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 122 AGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGATCTCAAGGCTAT 181 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 729 AGTGGAAGAAGTTGATATGGATGCTCTCATGCATATGACAGATGATGACCTCAAGGCTAT 788 Query 182 GCTCATACCGATG 194 ||||||||||||| Sbjct 789 GCTCATACCGATG 801 > AT3G06030.1 | Symbols: ANP3, MAPKKK12, NP3 | NPK1-related protein kinase 3 | chr3:1818740-1822840 REVERSE LENGTH=2246 Length=2246 Score = 108 bits (58), Expect = 9e-23 Identities = 64/67 (96%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 57 AAGGATGTCTGTGAACTGGTAAGCTTGAGGAGTTTCAATATATACCCACAGAAGTCAAAT 116 ||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||| Sbjct 1261 AAGGATGTCTGTGAACTGGGAAGCTTGAGGAGTTCCATTATATACCCACAGAAGTCAAAT 1320 Query 117 AACTCAG 123 ||||||| Sbjct 1321 AACTCAG 1327 > AT4G11745.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr4:7075826-7076680 REVERSE LENGTH=855 Length=855 Score = 58.4 bits (31), Expect = 1e-07 Identities = 33/34 (97%), Gaps = 0/34 (0%) Strand=Plus/Plus Query 585 ATTTTGTGTGCTGAGATTGCGCTTGAAAGACGCA 618 |||| ||||||||||||||||||||||||||||| Sbjct 718 ATTTGGTGTGCTGAGATTGCGCTTGAAAGACGCA 751 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 35716478517 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5