BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952206 Length=206 Score E Sequences producing significant alignments: (Bits) Value AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 ... 215 1e-55 AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid induci... 143 7e-34 > AT3G23030.1 | Symbols: IAA2 | indole-3-acetic acid inducible 2 | chr3:8180768-8181800 REVERSE LENGTH=941 Length=941 Score = 215 bits (116), Expect = 1e-55 Identities = 157/176 (89%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 33 GAT-TGGATTTGTACCAACGTACGAGGATAAAGATGGAGATTGGATGTTGGTTGGTGATG 91 ||| ||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||| Sbjct 495 GATCTGGATTTGTACCAACATACGAAGATAAAGATGGTGACTGGATGTTGGTTGGTGATG 554 Query 92 TTCCATGGGACATGTTCTCTTCTTCCTGTAAAAGACTCGGAATCATGAAAGGAT-----G 146 ||||||||||||||||||||||||| ||||| |||||| |||||||||| |||| | Sbjct 555 TTCCATGGGACATGTTCTCTTCTTCTTGTAAGAGACTCAGAATCATGAAGGGATCCGACG 614 Query 147 CTCCTGCTCTAGACTCTTCCTTATGATCTACAGAAGATGAGAAGCTTTTGTTTAAA 202 |||||||||||||||||||||||||||| | ||||| |||||| ||||||| |||| Sbjct 615 CTCCTGCTCTAGACTCTTCCTTATGATCCAGAGAAGCTGAGAATCTTTTGTCTAAA 670 > AT4G14560.1 | Symbols: IAA1, AXR5 | indole-3-acetic acid inducible | chr4:8361058-8361986 FORWARD LENGTH=837 Length=837 Score = 143 bits (77), Expect = 7e-34 Identities = 103/115 (90%), Gaps = 3/115 (3%) Strand=Plus/Plus Query 33 GAT-TGGATTTGTACCAACGTACGAGGATAAAGATGGAGATTGGATGTTGGTTGGTGATG 91 ||| |||||||||||| || || || || ||||||||||||||||||||||| ||||||| Sbjct 495 GATCTGGATTTGTACCTACTTATGAAGACAAAGATGGAGATTGGATGTTGGTCGGTGATG 554 Query 92 TTCCATGGGACATGTTCTCTTCTTCCTGT-AAAAGACTCGGAATCATGAAAGGAT 145 |||||||||||||||||||||| || ||| |||| |||| ||||||||||||||| Sbjct 555 TTCCATGGGACATGTTCTCTTCATCTTGTCAAAA-ACTCAGAATCATGAAAGGAT 608 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 9205147233 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5