BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952264

Length=316
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G30090.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) sup...   326    1e-88


> AT2G30090.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) superfamily 
protein | chr2:12843583-12845597 REVERSE LENGTH=1161
Length=1161

 Score =  326 bits (176),  Expect = 1e-88
 Identities = 190/197 (96%), Gaps = 0/197 (0%)
 Strand=Plus/Plus

Query  21   ATGGTGGGGCAATGGGAGGAAGAAGTTGATGAAGAGGTGGTGATCAGATGCTACGATGAT  80
            ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  1    ATGGTGGGGCAATGGGAAGAAGAAGTTGATGAAGAGGTGGTGATCAGATGCTACGATGAT  60

Query  81   AGTAGGGACAGAATTCAAATGGGTCGTGTGGAGAAGAGTTGTGAGATTGGTCACGACCAA  140
             |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| 
Sbjct  61   CGTAGGGACAGAATTCAAATGGGTCGTATGGAGAAGAGTTGTGAGATTGGTCACGACCAC  120

Query  141  CAAACTCTTCTCTTCACAGACACTTTAGGCGATCCCATCTGCAGAATCCGAAATAGTCCG  200
            ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| 
Sbjct  121  CAAACTCTTCTCTTCACTGACACTTTAGGTGATCCCATCTGCAGAATCCGAAATAGTCCT  180

Query  201  TTCTTCATTATGCTGGT  217
            |||||||||||||||||
Sbjct  181  TTCTTCATTATGCTGGT  197



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 14678182708


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5