BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952288 Length=631 Score E Sequences producing significant alignments: (Bits) Value AT5G64110.1 | Symbols: | Peroxidase superfamily protein | chr5... 928 0.0 > AT5G64110.1 | Symbols: | Peroxidase superfamily protein | chr5:25654074-25656030 REVERSE LENGTH=1397 Length=1397 Score = 928 bits (502), Expect = 0.0 Identities = 568/600 (95%), Gaps = 4/600 (1%) Strand=Plus/Plus Query 1 AAAAACTAAGAAGAAACCAAAATGGGAAGTTCTACTAAAATT-AATCCTTGCTACGTTCT 59 |||||||||||||||||||||||| |||||| |||| || || ||||||||||||||||| Sbjct 64 AAAAACTAAGAAGAAACCAAAATGAGAAGTTTTACT-AATTTAAATCCTTGCTACGTTCT 122 Query 60 CTTACCGTTTTTCCTTGTCCTAGCCGCGAATGCAACACATAAAAACGTTTTCCTCCCAAG 119 ||||||||| ||||||||||||||| ||||||||||||||| |||| |||||||||||| Sbjct 123 CTTACCGTTCTTCCTTGTCCTAGCCACGAATGCAACACATACAAACAATTTCCTCCCAAG 182 Query 120 GCCACGGATC-GGGTATTACGGTAGTGCATGCTGGAATGTAGAATCGATAGTGCGGTCCG 178 |||||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 183 GCCACGGA-CTGGGTATTACGGTAGTGCATGCTGGAATGTAGAATCGATAGTTCGGTCCG 241 Query 179 TGGTCGAGTCTAACTATCTTGCTAATCCAGCTAATGCTCCGGGCATTTTGCGTATGCACT 238 |||| |||||||||||||||||||||||||| |||||||| ||||||||||||||||||| Sbjct 242 TGGTTGAGTCTAACTATCTTGCTAATCCAGCCAATGCTCCAGGCATTTTGCGTATGCACT 301 Query 239 TTCACGATTGTTTCGTCCAAGGCTGTGACGCCTCCGTTCTCCTAGCCGGACCTAACTCCG 298 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| | Sbjct 302 TTCACGATTGTTTCGTTCAAGGCTGTGACGCCTCCGTTCTCCTAGCCGGACCTAACTCTG 361 Query 299 AGAGAACGGCGATTCCGAATCTATCGTTGAGAGGGTTTAATGTCATCGAAGAAGCTAAGA 358 || ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct 362 AGCGAACGGCGATTCCAAATCTATCGTTGAGAGGGTTTAATGTCATTGAAGAAGCTAAGA 421 Query 359 CGCAGCTTGAGATCGCTTGTCCTCGAACTGTCTCTTGTGCTGATATTCTCGCACTCGCTG 418 | |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||| Sbjct 422 CTCAGCTTGAGATCGCTTGTCCTCGAACAGTCTCTTGTGCTGATATCCTCGCACTCGCTG 481 Query 419 CACGCGACTTCGTCAATTTGGCCGGTGGACCATGGTGGCCAGTTCCATTGGGGCGACTCG 478 |||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 482 CACGTGACTTCGTCCATTTGGCCGGTGGACCATGGTGGCCAGTTCCATTGGGGAGACTCG 541 Query 479 ATGGCCGGGTTTCGCTAGCCTCGAATGTCATTTTGCCGGGACCTACCGACTCCGTTGCCG 538 ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 542 ATGGCCGAATTTCTCTAGCCTCGAATGTCATTTTGCCGGGACCTACCGACTCCGTTGCCG 601 Query 539 TACAGAAGCTGAGGTTCGCCGaaaaaaaTCTTAATACCCAAGATCTCGTTGTCCTTGCTG 598 | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 602 TGCAGAAGCTGAGGTTTGCCGAAAAAAATCTTAATACCCAAGATCTCGTTGTCCTTGCTG 661 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 30441893082 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5