BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952322 Length=242 Score E Sequences producing significant alignments: (Bits) Value AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN ... 368 1e-101 AT5G56010.1 | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 |... 326 7e-89 AT5G56030.2 | Symbols: HSP81-2 | heat shock protein 81-2 | chr5... 307 3e-83 > AT5G56000.1 | Symbols: Hsp81.4, AtHsp90.4 | HEAT SHOCK PROTEIN 81.4 | chr5:22677451-22680152 REVERSE LENGTH=2336 Length=2336 Score = 368 bits (199), Expect = 1e-101 Identities = 228/242 (94%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 1 GTTACAGGTCAAGCAAGAAGACTATGGAGATAAACCCAGAGAACTCCATCATGGACGAGC 60 |||||| ||||||||||||||| ||||| || |||||||||||||| |||||||| |||| Sbjct 1875 GTTACATGTCAAGCAAGAAGACAATGGAAATTAACCCAGAGAACTCGATCATGGATGAGC 1934 Query 61 TGAGAAAGAGAGCCGACGCGGACAAGAACGATAAGTCTGTGAAGGATCTTGTGCTTCTTC 120 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1935 TGAGAAAGAGAGCTGAAGCGGACAAGAACGATAAGTCTGTGAAGGATCTTGTGCTTCTTC 1994 Query 121 TCTTTGAGACCGCTCTTCTCACTTCTGGTTTCAGCCTCGATGAGCCCAACACTTTTGGAA 180 |||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct 1995 TCTTTGAGACCGCTCTTCTCACCTCTGGTTTCAGCCTTGATGAGCCCAACACTTTTGGAA 2054 Query 181 GCAGAATCCATAGGATGTTGAAGCTTGGATTGAGCATTTGACGATGATGATGCCGTTGAA 240 |||||||||| ||||||||||||||||||||||||||| || || ||||||||||||||| Sbjct 2055 GCAGAATCCACAGGATGTTGAAGCTTGGATTGAGCATT-GAAGAGGATGATGCCGTTGAA 2113 Query 241 GC 242 || Sbjct 2114 GC 2115 > AT5G56010.1 | Symbols: HSP81-3, Hsp81.3, AtHsp90-3, AtHsp90.3 | heat shock protein 81-3 | chr5:22681305-22684129 FORWARD LENGTH=2423 Length=2423 Score = 326 bits (176), Expect = 7e-89 Identities = 219/240 (91%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 3 TACAGGTCAAGCAAGAAGACTATGGAGATAAACCCAGAGAACTCCATCATGGACGAGCTG 62 |||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| |||||| Sbjct 1897 TACATGTCGAGCAAGAAGACAATGGAGATTAACCCAGAGAACTCCATCATGGATGAGCTG 1956 Query 63 AGAAAGAGAGCCGACGCGGACAAGAACGATAAGTCTGTGAAGGATCTTGTGCTTCTTCTC 122 ||||||||||| || || ||||||||||| |||||||||||||| ||||| ||||||||| Sbjct 1957 AGAAAGAGAGCTGATGCAGACAAGAACGACAAGTCTGTGAAGGACCTTGTACTTCTTCTC 2016 Query 123 TTTGAGACCGCTCTTCTCACTTCTGGTTTCAGCCTCGATGAGCCCAACACTTTTGGAAGC 182 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct 2017 TTTGAGACCGCTCTTCTCACTTCTGGTTTCAGCCTCGATGAGCCCAACACTTTCGGGAGC 2076 Query 183 AGAATCCATAGGATGTTGAAGCTTGGATTGAGCATTTGACGATGATGATGCCGTTGAAGC 242 || || || ||||||||||||||||||||||||||| || || ||||||| |||||||| Sbjct 2077 AGGATTCACAGGATGTTGAAGCTTGGATTGAGCATT-GATGACGATGATGTTGTTGAAGC 2135 > AT5G56030.2 | Symbols: HSP81-2 | heat shock protein 81-2 | chr5:22686832-22689471 FORWARD LENGTH=2316 Length=2316 Score = 307 bits (166), Expect = 3e-83 Identities = 217/242 (90%), Gaps = 1/242 (0%) Strand=Plus/Plus Query 1 GTTACAGGTCAAGCAAGAAGACTATGGAGATAAACCCAGAGAACTCCATCATGGACGAGC 60 |||||| ||| || |||||||| |||||||| || |||||||||||||||||||| ||| Sbjct 1968 GTTACATGTCGAGTAAGAAGACAATGGAGATTAATCCAGAGAACTCCATCATGGATGAGT 2027 Query 61 TGAGAAAGAGAGCCGACGCGGACAAGAACGATAAGTCTGTGAAGGATCTTGTGCTTCTTC 120 |||||||| |||| ||||| ||||||||||| |||||||||||||| ||||||||||| | Sbjct 2028 TGAGAAAGCGAGCTGACGCAGACAAGAACGACAAGTCTGTGAAGGACCTTGTGCTTCTCC 2087 Query 121 TCTTTGAGACCGCTCTTCTCACTTCTGGTTTCAGCCTCGATGAGCCCAACACTTTTGGAA 180 ||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| Sbjct 2088 TCTTTGAGACCGCTCTTCTCACTTCTGGTTTCAGCCTTGATGAGCCAAACACTTTCGGAA 2147 Query 181 GCAGAATCCATAGGATGTTGAAGCTTGGATTGAGCATTTGACGATGATGATGCCGTTGAA 240 |||| ||||| |||||| ||||||||||| |||||||| || || |||||||| |||||| Sbjct 2148 GCAGGATCCACAGGATGCTGAAGCTTGGACTGAGCATT-GATGACGATGATGCTGTTGAA 2206 Query 241 GC 242 || Sbjct 2207 GC 2208 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 10958369282 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5