BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952394 Length=478 Score E Sequences producing significant alignments: (Bits) Value AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglu... 599 8e-171 AT5G57540.1 | Symbols: XTH13, AtXTH13 | xyloglucan endotransglu... 512 1e-144 > AT5G57530.1 | Symbols: XTH12, AtXTH12 | xyloglucan endotransglucosylase/hydrolase 12 | chr5:23300321-23301605 REVERSE LENGTH=1062 Length=1062 Score = 599 bits (324), Expect = 8e-171 Identities = 384/413 (93%), Gaps = 4/413 (1%) Strand=Plus/Plus Query 68 CTTTCTTGTGGACGGGATCCCAATCCGGGTGTTCAAGAACAACGAGGCTAACGGCGTTGC 127 |||||| || || || |||||||||||||||||||||||||| |||||||||||||| || Sbjct 524 CTTTCTGGTTGATGGTATCCCAATCCGGGTGTTCAAGAACAATGAGGCTAACGGCGTGGC 583 Query 128 TTACCCGAAAAACCAACCAATGAAGATCTACTCGAGTCTTTGGGAAGCTGATGATTGGGC 187 ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||| Sbjct 584 TTACCCGAAAAGCCAACCAATGAAGATCTACTCAAGTCTATGGGAAGCTGATGATTGGGC 643 Query 188 CACACAAGGCGGGAGAGTCAAGATCGATTGGACTAACGCTCCATTCAGCGCTTCCTACAA 247 |||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 644 CACACAAGGCGGGAAAGTCAAGACCGATTGGACCAACGCTCCATTCAGCGCTTCCTACAG 703 Query 248 AAG-TTTCAACGATGTGGACTGCTGCAGCCGGACCTCGATATGGGACTGGGTTACCTGTA 306 ||| ||| ||||||||||| |||||||||||||||||||||||| |||||||||| |||| Sbjct 704 AAGCTTT-AACGATGTGGATTGCTGCAGCCGGACCTCGATATGGAACTGGGTTACGTGTA 762 Query 307 ATGCGAATAGCAACTCGTGGATGTGGACTACGCTTAACGCAAATCAGCTTGGACAGCTGA 366 ||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| Sbjct 763 ATGCGAATAGCAACTCGTGGATGTGGACTACACTTAATTCAAATCAGCTTGGACAGCTGA 822 Query 367 AGTGGGTGCAAGATGATTATATGATCTATAACTATTGTACAGATTTCAAGAGGTTCCCTC 426 ||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 823 AGTGGGTGCAAAAAGATTATATGATCTATAACTATTGTACGGATTTCAAGAGGTTCCCTC 882 Query 427 AAGGTTTACCCACGGAATGCAACCACAATTGATCGTATTACCA-AGAAAATTC 478 ||||||||||||| |||||||||| ||| |||||||||||| | ||||||||| Sbjct 883 AAGGTTTACCCACTGAATGCAACCTCAACTGATCGTATTAC-AGAGAAAATTC 934 > AT5G57540.1 | Symbols: XTH13, AtXTH13 | xyloglucan endotransglucosylase/hydrolase 13 | chr5:23302996-23304049 REVERSE LENGTH=855 Length=855 Score = 512 bits (277), Expect = 1e-144 Identities = 355/393 (90%), Gaps = 4/393 (1%) Strand=Plus/Plus Query 68 CTTTCTTGTGGACGGGATCCCAATCCGGGTGTTCAAGAACAACGAGGCTAACGGCGTTGC 127 |||||| ||||| || ||||||||||| ||||||||||||||||||||||| ||||| || Sbjct 465 CTTTCTCGTGGATGGAATCCCAATCCGAGTGTTCAAGAACAACGAGGCTAATGGCGTGGC 524 Query 128 TTACCCGAAAAACCAACCAATGAAGATCTACTCGAGTCTTTGGGAAGCTGATGATTGGGC 187 |||||||| | ||| ||||||||||| || || |||||||||||||||||||||||||| Sbjct 525 CTACCCGAAGAGCCAGCCAATGAAGATTTATTCAAGTCTTTGGGAAGCTGATGATTGGGC 584 Query 188 CACACAAGGCGGGAGAGTCAAGATC-GATTGGACTAACGCTCCATTCAGCGCTTCCTACA 246 ||||||||||||| |||||||| | |||||||| || |||||||||||||||||||||| Sbjct 585 TACACAAGGCGGGAAAGTCAAGA-CAGATTGGACCAATGCTCCATTCAGCGCTTCCTACA 643 Query 247 AAAGTTTCAACGATGTGGACTGCTGCAGCCGGACCTCGATATGGGACTGGGTTACCTGTA 306 |||||||||||||||||||||||||||||||||||||| | | | | ||||| || |||| Sbjct 644 AAAGTTTCAACGATGTGGACTGCTGCAGCCGGACCTCGTTGTTGAATTGGGTAACATGTA 703 Query 307 ATGCGAATAGCAACTCGTGGATGTGGACTACGCTTAACGCAAATCAGCT-TGGACAGCTG 365 ||||||||||||||||||||||||||||||| |||||| |||||||| | ||||||| || Sbjct 704 ATGCGAATAGCAACTCGTGGATGTGGACTACCCTTAACTCAAATCAG-TATGGACAGATG 762 Query 366 AAGTGGGTGCAAGATGATTATATGATCTATAACTATTGTACAGATTTCAAGAGGTTCCCT 425 ||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||| Sbjct 763 AAGTGGGTGCAAGATGATTATATGATCTATAACTATTGTACGGATTTTAAGAGGTTCCCT 822 Query 426 CAAGGTTTACCCACGGAATGCAACCACAATTGA 458 |||||||| || ||||||||||| | ||| ||| Sbjct 823 CAAGGTTTGCCTACGGAATGCAATCTCAACTGA 855 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 22756068591 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5