BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952449 Length=757 Score E Sequences producing significant alignments: (Bits) Value AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 ... 1040 0.0 > AT5G65670.1 | Symbols: IAA9 | indole-3-acetic acid inducible 9 | chr5:26253658-26256468 FORWARD LENGTH=1624 Length=1624 Score = 1040 bits (563), Expect = 0.0 Identities = 605/626 (97%), Gaps = 0/626 (0%) Strand=Plus/Plus Query 2 AAGAAACCTTAAGTATCCAATGTCTACGGAAGAGGAGCTACAGAGCAATGTCTCTGTGGC 61 |||||||||| ||||||||||||| ||||||||||||||||||||||||| || ||||| Sbjct 255 AAGAAACCTTGAGTATCCAATGTCCCCGGAAGAGGAGCTACAGAGCAATGTATCGGTGGC 314 Query 62 AAGTTCTTCACCTACTAGCAATTGTATCTCCAGGAACACTCTAGGTGGACTTAAAGAGCA 121 ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 315 TAGTTCTTCACCTACTAGCAATTGCATCTCCAGGAACACTCTAGGAGGACTTAAAGAGCA 374 Query 122 TAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCCACTCTCTCGCTCCTTGC 181 |||||||||||||||||||||||||||||||||||||||||| |||||||| | |||||| Sbjct 375 TAACTACTTGGGTCTCTCTGATTGTTCTTCTGTTGGAAGCTCTACTCTCTCTCCCCTTGC 434 Query 182 TGAAGATGACAAAGCTACTATCAGCCTCAAGGCTACGGAGCTGACACTTGGTCTTCCTGG 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 435 TGAAGATGACAAAGCTACTATCAGCCTCAAGGCTACGGAGCTGACACTTGGTCTTCCTGG 494 Query 242 ATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTCGATGA 301 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 495 ATCACAATCTCCTGCGAGAGACACAGAGCTTAACCTTTTGAGCCCAGCAAAGCTAGATGA 554 Query 302 GAAGCCATTCTTTCCTTTGCTTCCTTCTAAAGATGAGATATGCTCGTCCTCGCAAAAGAA 361 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 555 GAAGCCATTCTTTCCTTTGCTTCCTTCTAAAGATGAGATATGCTCCTCCTCGCAAAAGAA 614 Query 362 CAATGCATCCGGAAACAAAAGAGGCTTTTCTGATACAATGGATCAGTTTGCTGAAGCTAA 421 ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 615 CAATGCATCGGGAAACAAAAGAGGCTTTTCTGACACAATGGATCAGTTTGCTGAAGCTAA 674 Query 422 AAGTTCAGTCTATACTGAGAAAAACTGGATGTTCCCTGAAGCTGCAGCCACCCAGTCTGT 481 ||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 675 AAGTTCAGTGTATACTGAGAAAAACTGGATGTTCCCTGAAGCAGCAGCCACCCAGTCTGT 734 Query 482 AACAAAGAAGGATGTGCCACAAAACATACCGAAAGGACAGTCGAGCACTACAAACAATAG 541 ||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct 735 AACAAAGAAAGATGTGCCACAAAACATACCCAAAGGACAGTCTAGCACTACAAACAATAG 794 Query 542 CTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCGGTTGGCCTCCTGTGAGATCCTACAG 601 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 795 CTCTAGTCCACCTGCAGCCAAGGCACAAATTGTCGGTTGGCCTCCAGTGAGATCCTACAG 854 Query 602 GAAGAACACATTGGCCACTACTTGTA 627 |||||||||||||||||||||||||| Sbjct 855 GAAGAACACATTGGCCACTACTTGTA 880 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 36771395604 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5