BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952452 Length=541 Score E Sequences producing significant alignments: (Bits) Value AT4G33710.1 | Symbols: | CAP (Cysteine-rich secretory proteins... 789 0.0 AT5G26130.1 | Symbols: | CAP (Cysteine-rich secretory proteins... 571 2e-162 > AT4G33710.1 | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:16181012-16181776 FORWARD LENGTH=765 Length=765 Score = 789 bits (427), Expect = 0.0 Identities = 505/543 (93%), Gaps = 3/543 (1%) Strand=Plus/Plus Query 1 CAACTAAGATaaaaaa-aaaaaTGAAGATGTTTAACTCTCTTCAAACCCTAGTACTATTG 59 ||||||||| |||||| ||||||||||||||||| ||||| ||||||||||||||||||| Sbjct 33 CAACTAAGAAAAAAAATAAAAATGAAGATGTTTATCTCTCCTCAAACCCTAGTACTATTG 92 Query 60 GCGTTAGCTCTTTTCCTAGCTTTTGTAGTTCCACTGAAAGCCCAAGACCAGCCAAAAGAC 119 || ||||||||| |||||||||||| ||||||||||||||||||||||| || | ||||| Sbjct 93 GCATTAGCTCTTGTCCTAGCTTTTGCAGTTCCACTGAAAGCCCAAGACCGGCGACAAGAC 152 Query 120 TACCTCGCTGTACACAACCGTGCTCGAGACCACGTTGGTGTGCCTCATATAAAATGGCAT 179 ||||| | ||||||||||| |||||||||| ||||| ||||||||||||||||||||||| Sbjct 153 TACCTTGATGTACACAACCATGCTCGAGACGACGTTAGTGTGCCTCATATAAAATGGCAT 212 Query 180 GCGGGGGCGGCGCGATACGCCTGGAACTATGCTCAAATAAGAAAGCGGGACTGTCGTCTC 239 ||||| || || ||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 213 GCGGGAGCAGCCCGATACGCCTGGAACTATGCTCAAAGAAGAAAGCGGGACTGTCGTCTC 272 Query 240 AAACACTCAAACTCACGCGGGCGGTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATG 299 | ||||||||||||||||| || |||||||||||||||||||||||||||||||||||| Sbjct 273 ATTCACTCAAACTCACGCGGACGTTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATG 332 Query 300 TCCGGAGCTGCCGCAGTGAGATTGTGGGTCAAAGAGAAGTCTGACTACTTCCACAAATCG 359 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 333 TCCGGAGCTGCCGCAGTGAGATTGTGGGTCAGGGAGAAGTCTGACTACTTCCACAAATCG 392 Query 360 AACACATGTCGTGCTGGAAAACAATGTGGTCATTATACTCAGGTTGTGTGGAAAAACTC- 418 |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 393 AACACATGCCGTGCTGGAAAACAATGTGGTCATTATACTCAAGTTGTGTGGAAAAACTCA 452 Query 419 GAAGTGGGTTGGGTGTGCCAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAA 478 || ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 453 GA-GTGGGTTGGATGTGCCAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAA 511 Query 479 CTATTTTCCTCCTGGTAATATTAGGGGCCGTTGGCCTTACTAAGTGTATGTGTACGCTGA 538 ||||| || |||||||||| ||||||| ||| ||||||||||| | ||||||||||| || Sbjct 512 CTATTCTCATCCTGGTAATGTTAGGGGACGTAGGCCTTACTAACTATATGTGTACGCAGA 571 Query 539 CGA 541 ||| Sbjct 572 CGA 574 > AT5G26130.1 | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr5:9128110-9128610 REVERSE LENGTH=501 Length=501 Score = 571 bits (309), Expect = 2e-162 Identities = 444/508 (87%), Gaps = 14/508 (3%) Strand=Plus/Plus Query 21 ATGAAGATGTTTAACTCTCTTCAAACCCTAGTACTATT-GGCGT-TAGCTCTTTTCCTAG 78 |||||||||||||| |||| |||||| ||| |||| || || | ||| ||||||||||| Sbjct 1 ATGAAGATGTTTAAATCTCCTCAAACACTAATACT-TTCGG-TTATAGTTCTTTTCCTAG 58 Query 79 CTTTTGTAGTTCCACTGAAAGCCCAAGACCAGCCAAAAGACTACCTCGCTGTACACAACC 138 |||||| |||||| ||||||||||||||||||||| |||||||||||| || |||||||| Sbjct 59 CTTTTGCAGTTCCTCTGAAAGCCCAAGACCAGCCACAAGACTACCTCGATGAACACAACC 118 Query 139 GTGCTCGAGA-CCACGTTGGTGTGCCTCATATAAAATGGCATGCGGGGGCGGCGCGATAC 197 |||||||| | ||| ||||||||||||| ||| ||||||||||||||||||| || |||| Sbjct 119 GTGCTCGA-ACCCAAGTTGGTGTGCCTCCTATGAAATGGCATGCGGGGGCGGAGCAATAC 177 Query 198 GCCTGGAACTATGCTCAA-ATAAGAAAGCGG-GACTGTCGTCTCAAACACTCAAACTCAC 255 |||||||||||||||||| | ||||||| || |||||| |||||| ||||| |||||| Sbjct 178 GCCTGGAACTATGCTCAACA-AAGAAAG-GGAGACTGTAGTCTCACTCACTCCAACTCAA 235 Query 256 GCGGGCGGTACGGTGAAAACTTGGCATGGAGCAGTGGTGATATGTCCGGAGCTGCCGCAG 315 |||| |||||||||||||||||||||||| | |||| | |||| ||||||| |||| Sbjct 236 ATGGGCTTTACGGTGAAAACTTGGCATGGAGCGGAGGTGCTTTGTCTGGAGCTGAGGCAG 295 Query 316 TGAGATTGTGGGTCAAAGAGAAGTCTGACTACT-TCCACAAATCGAACACATGTCGTGCT 374 ||| |||||||||||| |||||||||||||| | || || |||||||| ||| ||| | Sbjct 296 TGAAATTGTGGGTCAACGAGAAGTCTGACTA-TATCTACGCTTCGAACACTTGTAGTGAT 354 Query 375 GGAAAACAATGTGGTCATTATACTCAGGTTGTGTGGAAAAACTCGAAGTGGGTTGGGTGT 434 |||||||||||||||||||| ||||| ||||||||| || |||| |||||||||||||| Sbjct 355 GGAAAACAATGTGGTCATTACACTCAAGTTGTGTGGCGAACCTCGGAGTGGGTTGGGTGT 414 Query 435 GCCAAAGTCAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTTTCCTCCTGGT 494 |||||||| |||||||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 415 GCCAAAGTAAAGTGTGACAATGGTGGAACCTTTGTGACTTGCAACTATTATCCACCTGGT 474 Query 495 AAT-ATTAGGGGCCGTTGGCCTTACTAA 521 ||| || ||||||||||||||||||||| Sbjct 475 AATTAT-AGGGGCCGTTGGCCTTACTAA 501 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 25920819852 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5