BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952485

Length=221
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G44110.2 | Symbols: MLO15, ATMLO15 | Seven transmembrane MLO...   215    1e-55


> AT2G44110.2 | Symbols: MLO15, ATMLO15 | Seven transmembrane MLO 
family protein | chr2:18245357-18248329 REVERSE LENGTH=1639
Length=1639

 Score =  215 bits (116),  Expect = 1e-55
 Identities = 160/181 (88%), Gaps = 3/181 (2%)
 Strand=Plus/Plus

Query  18   AAAAATGGCGGGAGGAGGAACGACCTTAGAGTATACGCCAACATGGGTGGTGGCTCTCGT  77
            ||||||||||||||||||||||||||||||||| || ||||| |||||||| ||||||||
Sbjct  10   AAAAATGGCGGGAGGAGGAACGACCTTAGAGTACACACCAACTTGGGTGGTTGCTCTCGT  69

Query  78   CTGCTCTGTTATCGTCTCCATCTCTTTCGGCGTTGAGCGTCTCCTCCATCGTGCCGGAAA  137
            |||||| || || ||||| |||||||| | ||| ||||||||| | || |||||||||||
Sbjct  70   CTGCTCCGTCATTGTCTCTATCTCTTTTGCCGTCGAGCGTCTCATTCACCGTGCCGGAAA  129

Query  138  GCACTTTC-GAAAGAACGATCAGAAGCAACTTTTCAGGGGCATTACAAAAGATCAAAGAA  196
            |||||||  |||  |||||||||||||| |||||  ||||||||||||||||||||||||
Sbjct  130  GCACTTTAAGAAC-AACGATCAGAAGCAGCTTTTT-GGGGCATTACAAAAGATCAAAGAA  187

Query  197  G  197
            |
Sbjct  188  G  188



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 9902746553


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5