BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg952533
Length=567
Score E
Sequences producing significant alignments: (Bits) Value
AT3G14690.1 | Symbols: CYP72A15 | cytochrome P450, family 72, s... 390 6e-108
AT3G14650.1 | Symbols: CYP72A11 | cytochrome P450, family 72, s... 368 3e-101
AT3G14660.1 | Symbols: CYP72A13 | cytochrome P450, family 72, s... 363 1e-99
AT3G14640.1 | Symbols: CYP72A10 | cytochrome P450, family 72, s... 357 6e-98
> AT3G14690.1 | Symbols: CYP72A15 | cytochrome P450, family 72,
subfamily A, polypeptide 15 | chr3:4937317-4939465 FORWARD
LENGTH=1787
Length=1787
Score = 390 bits (211), Expect = 6e-108
Identities = 239/252 (95%), Gaps = 4/252 (2%)
Strand=Plus/Plus
Query 18 AGAATATGGTACCTGCGTTCCACCAGAGCTGCAGCG-AGATTGTTGGCGAATGGGA-CAA 75
||||||||||||||||||||||||||||||| || | || |||||||||||||||| | |
Sbjct 587 AGAATATGGTACCTGCGTTCCACCAGAGCTGTAGGGAAG-TTGTTGGCGAATGGGATC-A 644
Query 76 GTTAGTGTCGGATAAGGGGTCGTCCTGTGAGGTGGACGTTTGGCCTGGGCTTGTGAGTAT 135
|||||| |||||||| |||||||| |||||||| ||||||||||||||||||||||||||
Sbjct 645 GTTAGTATCGGATAAAGGGTCGTCATGTGAGGTAGACGTTTGGCCTGGGCTTGTGAGTAT 704
Query 136 GACTGCAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGAAGGGCAGAGGAT 195
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 705 GACTGCAGATGTGATCTCTCGTACTGCATTTGGCAGCAGCTACAAAGAAGGGCAGAGGAT 764
Query 196 CTTTGAGCTCCAAGCAGAACTAGCACAGCTCATCATTCAAGCTTTTAGGAAAGCTTTCAT 255
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 765 ATTTGAGCTCCAAGCAGAACTAGCACAGCTCATCATTCAAGCTTTTAGGAAAGCTTTCAT 824
Query 256 CCCTGGATTTAG 267
|||||||| |||
Sbjct 825 CCCTGGATATAG 836
Score = 331 bits (179), Expect = 4e-90
Identities = 232/258 (90%), Gaps = 2/258 (1%)
Strand=Plus/Plus
Query 289 AGCAGAGTTCAATCCTGAGAGATTCAAAGACGGTCTTTCAAAGGCAACAAAGAGCCAAGT 348
|||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||
Sbjct 1377 AGCAGAGTTCAATCCTGACAGATTTAAAGATGGTCTTTCAAAGGCAACAAAGAGCCAAGT 1436
Query 349 CTCCTTATTTCCTTTTGCGTGGGGACCGAGGATATGCATCGGCCAGAACTTTGCCCTGTT 408
|||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1437 CTCCTTCTTTCCCTTTGCGTGGGGACCGAGGATATGCATAGGCCAGAACTTTGCCCTGTT 1496
Query 409 GGAGGCAAAAATGGCAATGGCATTGATTCTACAGAGATTCTCCCTTGAGCTTTCTCCTTC 468
||||||||||||||||||||||||||||| | ||| ||||| ||||| ||||||||||
Sbjct 1497 AGAGGCAAAAATGGCAATGGCATTGATTCTGCGGAGGTTCTCGTTTGAGATTTCTCCTTC 1556
Query 469 CTACGTTCATGCGCC-TCAAACAGTCGTCACCATTCACCCACAGTTTGGTGCTCCTCTAA 527
||| ||||| || || | | |||||| ||||||||||||||||||| ||||||| || |
Sbjct 1557 CTATGTTCACGCACCAT-ACACAGTCATCACCATTCACCCACAGTTCGGTGCTCAGCTTA 1615
Query 528 TCTTGCACAAGCTATAAT 545
|| |||||||||| ||||
Sbjct 1616 TCATGCACAAGCTCTAAT 1633
> AT3G14650.1 | Symbols: CYP72A11 | cytochrome P450, family 72,
subfamily A, polypeptide 11 | chr3:4922131-4924694 FORWARD
LENGTH=2143
Length=2143
Score = 368 bits (199), Expect = 3e-101
Identities = 233/250 (93%), Gaps = 0/250 (0%)
Strand=Plus/Plus
Query 18 AGAATATGGTACCTGCGTTCCACCAGAGCTGCAGCGAGATTGTTGGCGAATGGGACAAGT 77
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct 569 AGAATATGGTACCTGCGTTCCACCAGAGCTGCAGCGAGATTGTTTGCAAATGGGACAAGT 628
Query 78 TAGTGTCGGATAAGGGGTCGTCCTGTGAGGTGGACGTTTGGCCTGGGCTTGTGAGTATGA 137
||||||||||||| | ||| || |||||||| || |||||||||||||||||||||||||
Sbjct 629 TAGTGTCGGATAAAGAGTCATCATGTGAGGTAGATGTTTGGCCTGGGCTTGTGAGTATGA 688
Query 138 CTGCAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGAAGGGCAGAGGATCT 197
|||||||||||||||| |||||||||||||||||||||| | ||||||||||||||| |
Sbjct 689 CTGCAGATGTGATCTCCCGTACTGCTTTTGGCAGCAGCTGCGTAGAAGGGCAGAGGATAT 748
Query 198 TTGAGCTCCAAGCAGAACTAGCACAGCTCATCATTCAAGCTTTTAGGAAAGCTTTCATCC 257
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct 749 TTGAGCTCCAAGCAGAACTAGCACAGCTCATCATTCAAACGGTTAGGAAAGCTTTCATCC 808
Query 258 CTGGATTTAG 267
|||||| |||
Sbjct 809 CTGGATATAG 818
Score = 357 bits (193), Expect = 6e-98
Identities = 245/270 (91%), Gaps = 4/270 (1%)
Strand=Plus/Plus
Query 296 TTCAATCCTGAGAGATTCAAAGACGGTCTTTCAAAGGCAACAAAGAGCCAAGTCTCCTTA 355
||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1729 TTCAAGCCTGAGAGATTCAAAGACGGTCTTTCAAAGGCAACAAAGAGCCACGTCTCCTTC 1788
Query 356 TTTCCTTTTGCGTGGGGACCGAGGATATGCATCGGCCAGAACTTTGCCCTGTTGGAGGCA 415
||||| ||||| |||||||||| |||||||||||||||||| |||||| |||||||||||
Sbjct 1789 TTTCCATTTGCATGGGGACCGAAGATATGCATCGGCCAGAATTTTGCCATGTTGGAGGCA 1848
Query 416 AAAATGGCAATGGCATTGATTCTACAGAGATTCTCCCTT-GAGCTTTCTCCTTCCTACGT 474
|| ||||||||||| ||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct 1849 AAGATGGCAATGGCGTTGATTCTACAGAGATTCTCC-TTCGAGCTTTCTCCTTCCTATGT 1907
Query 475 TCATGCGCCTCAAACAGTCGTCACCATTCACCCACAGTTTGGTGCTCCTCTAATCTTGCA 534
|||||||||||||| |||||||||||||||||||||||| ||||| | ||| ||| |||
Sbjct 1908 TCATGCGCCTCAAATAGTCGTCACCATTCACCCACAGTTCGGTGCACATCTTATCCTGCG 1967
Query 535 CAAGCTATAATTCTATAA-CACCATATGCT 563
|||||| |||||||| || | |||| ||||
Sbjct 1968 CAAGCTGTAATTCTAGAATC-CCATGTGCT 1996
> AT3G14660.1 | Symbols: CYP72A13 | cytochrome P450, family 72,
subfamily A, polypeptide 13 | chr3:4924777-4927434 FORWARD
LENGTH=2245
Length=2245
Score = 363 bits (196), Expect = 1e-99
Identities = 229/245 (93%), Gaps = 2/245 (1%)
Strand=Plus/Plus
Query 20 AATATGGTACCTGCGTTCCACCAGAGCTGCAGCGAGATTGTTGGCGAATGGGACAAGTTA 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 679 AATATGGTACCTGCGTTCCACCAGAGCTGCAGCGAGATTGTTGGCGAATGGGACAAGTTA 738
Query 80 GTGTCGGATAAGGGGTCGTCCTGTGAGGTGGACGTTTGGCCTGGGCTTGTGAGTATGACT 139
||| ||||||| ||| |||||||||||||| |||||||| |||||||||||||||||
Sbjct 739 GTGACGGATAAACAGTCATCCTGTGAGGTGGATATTTGGCCTTGGCTTGTGAGTATGACT 798
Query 140 GCAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGAAGGGCAGAGGATCTTT 199
|||||||||||||| |||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 799 GCAGATGTGATCTCCCGTACTGCATTTGGCAGCAGCTACAAAGAAGGGCAGAGGATATTT 858
Query 200 GAGCTCCAAGCAGAACTAGCACAGCTCATCATTCAAGCTTTTAGGAAAGCT-TTCATCCC 258
||||||||||| ||| |||||||||||||||||||||||||| |||||||| || |||||
Sbjct 859 GAGCTCCAAGCGGAATTAGCACAGCTCATCATTCAAGCTTTTCGGAAAGCTATT-ATCCC 917
Query 259 TGGAT 263
|||||
Sbjct 918 TGGAT 922
> AT3G14640.1 | Symbols: CYP72A10 | cytochrome P450, family 72,
subfamily A, polypeptide 10 | chr3:4919856-4921787 FORWARD
LENGTH=1545
Length=1545
Score = 357 bits (193), Expect = 6e-98
Identities = 235/253 (93%), Gaps = 11/253 (4%)
Strand=Plus/Plus
Query 18 AGAATATGGTACCTGCGTTCCACCAGAGCTGCAGCGA-GATTGTTGGCGAATGGGA-CAA 75
||||||||||||||||||||||||||||||||||||| | |||||||||||| ||| |||
Sbjct 494 AGAATATGGTACCTGCGTTCCACCAGAGCTGCAGCGATG-TTGTTGGCGAAT-GGAGCAA 551
Query 76 GTTAGTGTCGGAT-AAGGG--GTCGTCCTGTGAGGTGGACGTTTGGCCTGGGCTTGTGAG 132
||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||
Sbjct 552 GTTAGTGTCGGATAAAGGGTCGTCGTCCTGTGAGGTAGACGTTTGGCCTTGGCTTGTGAG 611
Query 133 TATGACTGCAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGAAGGGCAGAG 192
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 612 TATGACTGGAGATGTGATCTCTCGTACTGCTTTTGGCAGCAGCTACAAAGAAGGGCAGAG 671
Query 193 GATCTTTGAGCTCCAAGCAGAACTAGCACAGCTCATCATT-CAAGCTTTTAGGAAAGCTT 251
|||||||||||| ||||||||||||| ||| |||||| || ||||||||| |||||| ||
Sbjct 672 GATCTTTGAGCTACAAGCAGAACTAGTACATCTCATC-TTACAAGCTTTTTGGAAAG-TT 729
Query 252 T-CATCCCTGGAT 263
| |||||||||||
Sbjct 730 TACATCCCTGGAT 742
Score = 335 bits (181), Expect = 3e-91
Identities = 233/258 (90%), Gaps = 4/258 (2%)
Strand=Plus/Plus
Query 289 AGCAGAGTTCAATCCTGAGAGATTCAAAGACGGTCTTTCAAAGGCAACAAAGAGCCAAGT 348
|||||| || || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1290 AGCAGAATTTAAGCCTGAGAGATTCAAAGACGGTCTTTCAAAGGCAACAAAGAGCCAAGT 1349
Query 349 CTCCTTATTTCCTTTTGCGTGGGGACCGAGGATATGCATCGGCCAGAACTTTGCCCTGTT 408
|||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||| ||||
Sbjct 1350 CTCCTTCTTTCCATTTGCATGGGGACCGAGGATATGCATCGGCCAGAATTTTGCCATGTT 1409
Query 409 GGAGGCAAAAATGGCAATGGCATTGATTCTACAGAGATTCTCCCTT-GAGCTTTCTCCTT 467
|||||||| ||||||||||| ||||||||||||| |||| || || |||||||||||||
Sbjct 1410 AGAGGCAAAGATGGCAATGGCGTTGATTCTACAGACATTCACC-TTCGAGCTTTCTCCTT 1468
Query 468 CCTACGTTCATGCGCCTCAAACAGTCGTCACCATTCACCCACAGTTTGGTGCTCCTCTAA 527
|||| ||||||||||||||||||||||| ||||||||||| ||||| ||||| | ||| |
Sbjct 1469 CCTATGTTCATGCGCCTCAAACAGTCGTTACCATTCACCCGCAGTTCGGTGCACATCTTA 1528
Query 528 T-CTTGCACAAGCTATAA 544
| || || ||||||||||
Sbjct 1529 TTCT-GCGCAAGCTATAA 1545
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 27226907674
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5