BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952594

Length=479
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G39030.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) sup...   686    0.0  


> AT2G39030.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) superfamily 
protein | chr2:16298227-16299202 FORWARD LENGTH=976
Length=976

 Score =  686 bits (371),  Expect = 0.0
 Identities = 417/439 (95%), Gaps = 3/439 (1%)
 Strand=Plus/Plus

Query  1    TCTTCAAAGACAAGTAACaaaaaaaTGGCGCCTCCAACCGCAGCACCAGAGCCAAACACC  60
            |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| 
Sbjct  10   TCTTCAAAAACAAGTAACAGAAAAATGGCGCCTCCAACCGCAGCACCAGAGCCAAACACT  69

Query  61   GTGCCAGAGACTTCACCGACTGGCCACCCTATGTTTTCCCGGATCCGCCTGGCGACGCCG  120
            |||||||||||||||||||| ||||||| ||||||||||||||||||||| || ||||||
Sbjct  70   GTGCCAGAGACTTCACCGACCGGCCACCGTATGTTTTCCCGGATCCGCCTCGCTACGCCG  129

Query  121  ACTGATGTCCCTTTCATTCACAAGCTAATCCACCAGATGGCGGTTTTTGAGCGCCTCACG  180
            || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  130  ACCGATGTCCCTTTCATTCACAAGCTAATCCACCAGATGGCGGTTTTTGAGCGCCTCACG  189

Query  181  CATCTATTTGTCGCCACCGAGTCTGGTCTTGCCTCCACTCTCTTCAACTCCCGTCCATTC  240
            ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct  190  CATCTCTTTGTCGCCACCGAGTCTGGTCTTGCCTCCACGCTCTTCAACTCCCGTCCGTTC  249

Query  241  CAAGCCGTCACCGTCTTTCTCTTGGAGATCTCCCCTTCTCCATTTTCCACCA---ATGAC  297
            ||||||||||||||||| |||||||| ||||||||||| |||||| ||||||   |||||
Sbjct  250  CAAGCCGTCACCGTCTTCCTCTTGGAAATCTCCCCTTCCCCATTTCCCACCACTCATGAC  309

Query  298  GTTTCGTCCCCTGAATTCACCCCCTTTCTTGAGACGCATAAGGTTGATCTCCCTATCGAG  357
            | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  310  GCTTCGTCCCCTGATTTCACCCCCTTTCTTGAGACGCATAAGGTTGATCTCCCTATCGAG  369

Query  358  GATCCGGACAAAGACAAGTTCTTGCCGGATAAGCTCAACGACGTGGTGGTGGCTGGATTC  417
            |||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct  370  GATCCGGACAGAGAAAAGTTCTTGCCGGATAAGCTCAACGACGTGGTGGTGGCTGGATTC  429

Query  418  GTTCTGTTCTTCCCGAACT  436
            |||||||||||||||||||
Sbjct  430  GTTCTGTTCTTCCCGAACT  448



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 22806302738


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5