BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952605 Length=553 Score E Sequences producing significant alignments: (Bits) Value AT3G19120.1 | Symbols: | PIF / Ping-Pong family of plant trans... 926 0.0 > AT3G19120.1 | Symbols: | PIF / Ping-Pong family of plant transposases | chr3:6609412-6611059 REVERSE LENGTH=1648 Length=1648 Score = 926 bits (501), Expect = 0.0 Identities = 537/554 (97%), Gaps = 3/554 (1%) Strand=Plus/Plus Query 1 ACGTTTGTGTGAAAGCTCCAGGTGGAGAAGACGACTCTTCTCATTTCAGAGATAGTCTTC 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 850 ACGTTTGTGTGAAAGCTCCAGGTGGAGAAGACGACTCTTCTCATTTCAGAGATAGTCTTC 909 Query 61 TCTATAAGAGGCTTACTTCAGGAGACATTGTTTGGGAGAAAGTTATCAATATTAGAGGTC 120 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 910 TATATAAGAGGCTTACTTCAGGAGACATTGTTTGGGAGAAAGTTATCAATATTAGAGGTC 969 Query 121 ATCATGTGAGACCATACATTGTTGGAGATTGGTGTTACCCTCTTCTCTCATTCCTGATGA 180 | ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 970 ACCATGTGAGACCATACATTGTTGGAGATTGGTGTTATCCTCTTCTCTCATTCCTGATGA 1029 Query 181 CTCCCTTTTCACCAAATGGCTCTGGTTCGCCGCCGGAGAATCTATTCGACGGAATGTTGA 240 |||| ||||||||||||||||||||| |||| ||||||||||||||||| |||||||||| Sbjct 1030 CTCCATTTTCACCAAATGGCTCTGGTACGCCACCGGAGAATCTATTCGATGGAATGTTGA 1089 Query 241 TGAAAGGAAGGTCAGTTGTGGTGGAAGCTATTGGATTGCTCAAGGCTAGATGGAAGATTC 300 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1090 TGAAAGGAAGGTCAGTGGTGGTGGAAGCTATTGGATTGCTCAAGGCTAGATGGAAGATTC 1149 Query 301 TTCAAAGTTTGAATGTTGGAGTGAACCATGCTCCTCAGACTATTGTGGCTTGTTGTGTGT 360 |||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1150 TTCAGAGTTTGAATGTTGGTGTGAACCATGCTCCTCAGACTATTGTGGCTTGTTGTGTGT 1209 Query 361 TGCATAATCTTTGTCAGATTGCTAGAGAACCCGAACCGGAGATTTGGAAGGATCCGGATG 420 ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| Sbjct 1210 TGCATAATCTTTGTCAGATTGCTAGAGAACCTGAACCGGAGATTTGGAAGGATCCAGATG 1269 Query 421 AAGCTGGAACGCCTGCAAGAGTATTGGAGAGTGAGAGGCAGTTTTACTATTACGGGGAGA 480 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1270 AAGCTGGAACGCCTGCAAGAGTTTTGGAGAGTGAGAGGCAGTTTTACTATTACGGGGAGA 1329 Query 481 GTTTGAGGCAAGCATTGGCAGAAGATTTGCACCAGAGACTCTCCTCGAGGTAAA-GACAT 539 |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||| Sbjct 1330 GTTTGAGGCAAGCATTGGCAGAAGATTTACACCAGAGACTCTCCTCGAGGTAAAAGACAT 1389 Query 540 GAGAACAGATCTTG 553 || | ||||||||| Sbjct 1390 GA-A-CAGATCTTG 1401 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 26523629616 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5