BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg952623 Length=309 Score E Sequences producing significant alignments: (Bits) Value AT2G38370.1 | Symbols: | Plant protein of unknown function (DU... 398 2e-110 > AT2G38370.1 | Symbols: | Plant protein of unknown function (DUF827) | chr2:16072070-16074258 REVERSE LENGTH=1773 Length=1773 Score = 398 bits (215), Expect = 2e-110 Identities = 275/302 (91%), Gaps = 12/302 (4%) Strand=Plus/Plus Query 2 GTCCCTGTCTTGAAGCCAACAATGTCAATAGGGCAAATACTCAGCAAGAAGCTACTTCTT 61 ||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 1360 GTCCCAGTCTTGAAACCAACAATGTCAATAGGACAAATACTGAGCAAGAAGCTACTTCTT 1419 Query 62 GCAGAGGATTCAGATATGAATGTTGCTAGCGAGAGAAGGAAAATGTCGTTGGGTCAGATG 121 |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 1420 GCAGAGGATTCAGATATGAATGTTGCTAATGAGAGAAGAAAAATGTCGTTGGGTCAGATG 1479 Query 122 CTGGCAAAGAATAGCAATAGTGATAAACCTGTAAGCAAGAGGAGTGAAGGGAAA-AGG-T 179 || ||||||||||||| |||||||||| ||||||||||||| |||||||||||| || | Sbjct 1480 CTTGCAAAGAATAGCAGTAGTGATAAAACTGTAAGCAAGAGAAGTGAAGGGAAAGAGAAT 1539 Query 180 C-GA------C-AA--CTCGAAAGAGAAAGAGTTTCGGATTTGCTAAGATCTCTGTCTTG 229 || | || |||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1540 GAGAAAAGGACGAAGACTCGAAAGAGAAAGAGTTTCGGATTTGCTAAGATCTCTGTGTTG 1599 Query 230 TTGAACaaagagagcaagaataagaagaagaagaaaaagaTAGCTTTGAACTTAAGGTGA 289 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1600 TTGAACAAAGAGAGCAAGAACAAGAAGAAGAAGAAAAAGATAGCTTTGAACTTAAGGTGA 1659 Query 290 TA 291 || Sbjct 1660 TA 1661 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 14326308465 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5