BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg952629

Length=337
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT2G36010.2 | Symbols: E2F3, ATE2FA | E2F transcription factor ...   481    2e-135


> AT2G36010.2 | Symbols: E2F3, ATE2FA | E2F transcription factor 
3 | chr2:15119589-15123184 FORWARD LENGTH=1935
Length=1935

 Score =  481 bits (260),  Expect = 2e-135
 Identities = 284/296 (96%), Gaps = 0/296 (0%)
 Strand=Plus/Plus

Query  1    CTCTCCCTTCACTACGATCCATGTCCGGTCTCGTACGATCTTCTCCCGGTTCTTCTCATC  60
            ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct  80   CTCTCGCTTCACTACGATCCATGTCCGGTGTCGTACGATCTTCTCCCGGTTCTTCTCAGC  139

Query  61   CGCCACCGCCGCCGCCGCACCATCCGCCGTCATCTCCGGTTCCGGTTACATCTACGCCGG  120
            ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct  140  CGCCACCGCCGCCGCCGCACCATCCACCGTCATCTCCGGTTCCGGTTACATCTACGCCGG  199

Query  121  TTGTACCACCTATACGTCGTCACTTAGCTTTCGCCTCAACAAAACCGCCGTTTCATCCTT  180
            || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct  200  TTATACCACCTATACGTCGTCACTTAGCTTTCGCCTCAACAAAACCTCCGTTTCATCCTT  259

Query  181  CGGATGATTACCATCGTTTTAACCCTTCTTCGCTCACTAATAATAACGATAGGAGCTTCG  240
            | |||||||||||||| ||||||||||||||||||| |||||||||||| ||||||||||
Sbjct  260  CCGATGATTACCATCGATTTAACCCTTCTTCGCTCAGTAATAATAACGACAGGAGCTTCG  319

Query  241  TTAATGCTTGTGGTGTTGTAGATCGGGAGGAAGATGCTGTCGTTGTTAGATCTCCT  296
            || ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  320  TTCATGGTTGTGGTGTTGTAGATCGGGAGGAAGATGCTGTCGTTGTTAGATCTCCT  375



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 15733805437


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5