BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G01340.2 Length=2397 Score E Sequences producing significant alignments: (Bits) Value Ahg470141 jgi|Araly1|470141|fgenesh2_kg.1__95__AT1G01340.1 3465 0.0 Ahg327678 jgi|Araly1|327678|fgenesh1_pm.C_scaffold_6002898 1611 0.0 Ahg914276 jgi|Araly1|914276|Al_scaffold_0001_4530 115 1e-24 > Ahg470141 jgi|Araly1|470141|fgenesh2_kg.1__95__AT1G01340.1 Length=2342 Score = 3465 bits (1876), Expect = 0.0 Identities = 2061/2151 (96%), Gaps = 10/2151 (0%) Strand=Plus/Plus Query 205 AGGTTCAAAGATGAAGGCAAACCATTATCCTCTGAATATGGTTATGGAAGAAAAGCTAGA 264 |||||||||||||||| || | ||||||||||||| |||||||||||||||||||||||| Sbjct 195 AGGTTCAAAGATGAAGACAGATCATTATCCTCTGAGTATGGTTATGGAAGAAAAGCTAGA 254 Query 265 CCTTCTTTAGATAGAGTTTTCAAGAATGTAAAATGGGGATTCAAGAAGCCATTGAGTTTC 324 ||||||||||| |||||||||||||||||||| |||||||||||||||||||| | |||| Sbjct 255 CCTTCTTTAGACAGAGTTTTCAAGAATGTAAAGTGGGGATTCAAGAAGCCATTAAATTTC 314 Query 325 CCTTCACATAAGGATCCTGACCACAAGGAAACATCTAGTGTTACTCGGAAGAACATCATA 384 | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 315 CGTTCACATAAGGATCCTGACCACAAGGAAACATCTAGTATTACTCGGAAGAACATCATA 374 Query 385 AACCCGCAGGATTCGTTTCTCCAGAACTGGAACAAAATATTTTTATTTGCTTGTGTGGTT 444 |||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||||| Sbjct 375 AACCCGCAGGATTCGTTTCTCCAGAATTGGAACAAAATATTTCTCTTTGCTTGTGTGGTT 434 Query 445 GCTTTGGCGATTGATCCATTGTTTTTCTACATTCCCATTGTCGATAGCGCAAGGCACTGT 504 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 435 GCTTTGGCGATTGATCCATTGTTTTTCTACATTCCCATTGTCGATGGCGCAAGGCACTGT 494 Query 505 CTTACTTTGGACTCAAAGTTGGAGATAGCTGCGAGTTTGCTTCGTACGCTCATCGATGCC 564 |||||||||||| |||||||||||||||||| ||||| ||||| || |||||||||||| Sbjct 495 CTTACTTTGGACAAAAAGTTGGAGATAGCTGCAAGTTTTCTTCGGACACTCATCGATGCC 554 Query 565 TTTTACATTATTCACATTGTGTTTCAGTTCAGGACAGCTTACATCGCTCCTTCTTCGCGG 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 555 TTTTACATTATTCACATTGTGTTTCAGTTCAGGACAGCTTACATCGCTCCTTCTTCGCGG 614 Query 625 GTTTTTGGAAGAGGTGAACTGGTAGATGATGCTAAGGCAATAGCCT-TAAAGTATCTCTC 683 |||||||||||||||||| ||||||||||||||||||| |||| || ||||||||||||| Sbjct 615 GTTTTTGGAAGAGGTGAATTGGTAGATGATGCTAAGGCTATAG-CTATAAAGTATCTCTC 673 Query 684 TTCTTACTTCATCATTGATCTACTCTCTATCCTTCCTCTCCCACAGATAGTAGTTTTAGC 743 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 674 ATCTTACTTCATCATTGATGTACTCTCTATCCTTCCTCTCCCACAGATAGTAGTTTTAGC 733 Query 744 CGTTATTCCAAGCGTCAACCAGCCAGTCTCTTTGCTAACAAAAGACTACCTTAAAT-TTT 802 |||||||| ||||||||||||||||||||||||| | ||||||||||||||||||| | | Sbjct 734 CGTTATTCAAAGCGTCAACCAGCCAGTCTCTTTGTTCACAAAAGACTACCTTAAATATGT 793 Query 803 CCATAATTGCTCAATATGTTCCTCGGATTCTCCGTATGTATCCGCTTTACACTGAAGTGA 862 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 794 -CATAATTGCTCAATATGTTCCTCGGATTCTCCGTATGTATCCGCTTTACACCGAAGTGA 852 Query 863 CAAGAACATCTGGCATTGTTACTGAAACAGCATGGGCTGGAGCTGCTTGGAACCTCTCTC 922 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 853 CCAGAACATCTGGCATTGTTACTGAAACAGCAAGGGCTGGAGCTGCTTGGAACCTCTCTC 912 Query 923 TCTATATGTTAGCCAGTCATGTGTTTGGAGCTTTATGGTACTTAATCTCAGTAGAACGAG 982 |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 913 TCTATATGTTAGCCAGTCATGTATTTGGAGCTTTATGGTACTTAATCTCAGTAGAACGAG 972 Query 983 AAGACAGATGCTGGCAAGAGGCATGCGAGAAGACAAAAGGTTGTAATATGAAATTCCTCT 1042 |||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |||| Sbjct 973 AAGACAGATGCTGGCAAGAGGCATGCGAGAAGACAAAAGGTTGTGATAAGAAATTTCTCT 1032 Query 1043 ACTGTGAAAACGATCGTAAC-GTTAGCAACAATTTCCTGACCACTTCTTGCCCATTTCTC 1101 |||||||||||||||| || |||||||||||||||||||||||||||||||||||| || Sbjct 1033 ACTGTGAAAACGATCG-CACTGTTAGCAACAATTTCCTGACCACTTCTTGCCCATTTATC 1091 Query 1102 GACCCTGGTGATATAACAAACTCAACCATCTTCAACTTTGGCATCTTCACTGATGCTCTT 1161 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1092 GACCCTGGTGATATAACAAACTCAACCATCTTCAACTTTGGCATCTTCACTGATGCTCTT 1151 Query 1162 AAGAGTGGCGTTGTTGAATCACATGATTTCTGGAAGAAATTCTTCTACTGCTTCTGGTGG 1221 |||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1152 AAGAGTGGGGTCGTTGAATCACATGATTTCTGGAAGAAATTCTTCTACTGCTTCTGGTGG 1211 Query 1222 GGTCTTCGAAATCTGAGTGCATTGGGACAGAATCTCCAAACTAGCAAATTCGTTGGTGAA 1281 ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1212 GGTCTGCGAAATCTGAGTGCATTGGGACAGAATCTCCAAACAAGCAAATTCGTTGGTGAA 1271 Query 1282 ATCATATTTGCTATATCAATCTGCATATCTGGACTAGTCTTATTTGCTCTACTTATCGGC 1341 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1272 ATCATATTTGCTATATCAATCTGCATATCTGGACTAGTCTTATTTGCGCTACTTATCGGC 1331 Query 1342 AATATGCAGAAATATTTGGAGTCAACAACAGTTCGAGAAGAGGAAATGAGGGTGAGAAAG 1401 |||||||||||||| ||||| ||||||||||||||||| ||||||||||| ||||||||| Sbjct 1332 AATATGCAGAAATACTTGGAATCAACAACAGTTCGAGAGGAGGAAATGAGAGTGAGAAAG 1391 Query 1402 AGAGATGCAGAGCAGTGGATGTCTCATAGAATGTTACCTGAAGACCTGAGGAAACGTATC 1461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1392 AGAGATGCAGAGCAGTGGATGTCTCATAGAATGTTACCTGAAGACCTGAGGAAACGTATC 1451 Query 1462 AGAAGATATGAACAATATAGATGGCAAGAGACAAGAGGAGTTGAAGAAGAAACCCTTCTT 1521 ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1452 AGAAGATATGAACAATATAGATGGCAAGAGACAAGAGGAGTCGAAGAAGAAACCCTTCTT 1511 Query 1522 CGTAACCTCCCTAAAGACCTCAGAAGAGATATTAAACGCCATCTTTGCCTCGATCTCCTC 1581 |||||||||||||||||||| |||||||| |||||||||||||| ||||| ||||||||| Sbjct 1512 CGTAACCTCCCTAAAGACCTTAGAAGAGACATTAAACGCCATCTCTGCCTTGATCTCCTC 1571 Query 1582 AAGAAAGTACCTTTGTTTGAGATAATGGATGAGCAGTTACTTGACGCGGTTTGCGATAGG 1641 ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||| Sbjct 1572 AAGAAAGTACCTTTGTTTGAGATAATGGACGAACAGTTACTTGACGCGGTTTGCGATAGG 1631 Query 1642 CTAAGACCTGTGCTCTACACCGAGAACAGTTACGTGATCCGTGAAGGAGATCCTGTTGGG 1701 |||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1632 CTAAAACCTGTGCTCTACACAGAGAACAGTTACGTGATCCGTGAAGGAGATCCTGTTGGA 1691 Query 1702 GAAATGTTGTTTGTTATGAGAGGAAGACTGGTAAGTGCCACCACTAATGGAGGAAGAAGT 1761 |||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct 1692 GAAATGCTGTTTGTGATGAGAGGAAGACTCGTAAGTGCCACCACTAATGGAGGAAGAAGT 1751 Query 1762 GGGTTCTTCAATGCCGTGAACCTAAAGGCAAGTGATTTCTGCGGAGAAGATCTTCTCCCG 1821 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1752 GGGTTCTTCAATGCCGTGAACCTAAAGGCAAGTGATTTCTGCGGAGAAGATCTTCTCCCG 1811 Query 1822 TGGGCATTAGATCCTCAATCTTCTTCTCACTTTCCCATCTCGACAAGAACAGTTCAAGCT 1881 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1812 TGGGCATTAGATCCTCAATCTTCTTCTCACTTTCCTATCTCGACAAGAACAGTTCAAGCT 1871 Query 1882 CTCACTGAAGTCGAAGCCTTTGCTCTCACAGCTGAGGATCTCAAGTCTGTCGCTTCACAA 1941 ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1872 CTCACCGAAGTCGAAGCCTTTGCTCTTACAGCTGAGGATCTCAAGTCTGTCGCTTCACAA 1931 Query 1942 TTCAGACGCCTCCATAGCAAGCAACTCCAACATACTTTTC-GGTTTTACTCAGTGCAATG 2000 ||||||||||||||||||||||| |||||||||||||| | ||||||| ||||||||||| Sbjct 1932 TTCAGACGCCTCCATAGCAAGCAGCTCCAACATACTTT-CAGGTTTTATTCAGTGCAATG 1990 Query 2001 GAGAACATGGAGCGTGTCTTTTATACAAGCAGCGTGGAGGAGATACTGTCGGAGGAAGTT 2060 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1991 GAGAACATGGAGCGTATCTTTTATACAAGCAGCGTGGCGGAGATACTGTCGGAGGAAGTT 2050 Query 2061 AGCCAAGTCACTACGCGATGAAGAAGATCGTCTCCGAGAAGCGCTCGCTAGTCAAGATAA 2120 ||| |||||| |||||||||||||||| ||||||||||||||||| |||| ||||||||| Sbjct 2051 AGCAAAGTCATTACGCGATGAAGAAGAGCGTCTCCGAGAAGCGCTGGCTAATCAAGATAA 2110 Query 2121 AGAACACAATGCTGCAACCGTGTCGTCGTCCTTGAGCCTTGGAGGCGCTCTTTACGCGTC 2180 ||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||| Sbjct 2111 AGAACGCAATGCTGCAACCGTGTCTTCGTCCTTGAGCCTTGGAGGTGCTCTTTACGCGTC 2170 Query 2181 GCGTTTCGCATCAAACGCGCTTCACAATCTGAGGCACAATATCTCCAACCTTCCTCCTCG 2240 ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 2171 GCGTTTCGCTTCAAACGCGCTTCACAATCTGAGGCACAATATATCCAACCTTCCTCCCCG 2230 Query 2241 CTACACTCTTCCTTTGCTACCTCAAAAACCCACCGAGCCTGACTTCACCGCCAATCATAC 2300 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 2231 CTACACTCTTCCTTTGCTACCTCAAAAACCCACCGAGCCTGACTTCACCGCCAATCACAC 2290 Query 2301 AACTGACCCTTAGATCTCTCTTGCATGTGTATAGTGTGTGGAATAAAGTGT 2351 ||||||||||||||||||| | |||||||||||||||||||||| ||||| Sbjct 2291 AACTGACCCTTAGATCTCT-TA-CATGTGTATAGTGTGTGGAATACAGTGT 2339 Score = 137 bits (74), Expect = 3e-31 Identities = 83/87 (95%), Gaps = 1/87 (1%) Strand=Plus/Plus Query 123 AGGACTCGTCACCCTGTAAGCGAAAGATCAGTTGAAATATACAAGGGTTTGGCTGATGGC 182 |||| ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 53 AGGATTCGTCACACTGTAAGCGAAAGATCAGTTGAAATATACAA-GGTTTGGCTGATGGC 111 Query 183 ATTTAGCCATGATAATCGTGTAAGGTT 209 ||||||||||||||||||| ||||||| Sbjct 112 ATTTAGCCATGATAATCGTCTAAGGTT 138 > Ahg327678 jgi|Araly1|327678|fgenesh1_pm.C_scaffold_6002898 Length=2094 Score = 1611 bits (872), Expect = 0.0 Identities = 1475/1762 (84%), Gaps = 57/1762 (3%) Strand=Plus/Plus Query 372 GAAGAACATCATAAACCCGC-AGGATTCGTTTCTCCAGAACTGGAACAAAATATTT-TTA 429 |||||| || |||||||| | ||| || ||| | ||||||||||||||||| ||| || Sbjct 198 GAAGAATATTATAAACCCACAAGG-CTCTTTTTTGCAGAACTGGAACAAAATCTTTCTT- 255 Query 430 TTTGCTTGTGTGGTTGCTTTGGCGATTGATCCATTGTTTTTCTACATTCCCATTGTCGAT 489 ||||||| |||| |||||||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct 256 TTTGCTTCTGTGATTGCTTTGGCCATTGATCCATTGTTTTTCTATATTCCTATTGTTGAT 315 Query 490 AGCGCAAGGCACTGTCTTACTTTGGACTCA-AAGTTGGAGATAGCTGCGAGTTTGCTTCG 548 | | ||| |||| |||| |||| | ||| || |||||| |||| || ||| ||||||| Sbjct 316 GGAGAAAGAAACTGCCTTAATTTGCA-TCATAACTTGGAGGTAGCAGCTAGTGTGCTTCG 374 Query 549 TACGCTCATCGATGCCTTTTACATTATTCACATTGTGTTTCAGTTCAGGACAGCTTACAT 608 |||| | || |||||||| ||||| |||||||||||||||||||| || || ||||| || Sbjct 375 TACGTTTATAGATGCCTTCTACATCATTCACATTGTGTTTCAGTTTAGAACTGCTTATAT 434 Query 609 CGCTCCTTCTTCGCGGGTTTTTGGAAGAGGTGAACTGGTAGATGATGCTAAGGCAATAGC 668 |||||||||| |||||||| |||||||| || |||| |||||| |||| || ||||| Sbjct 435 TTCTCCTTCTTCTCGGGTTTTCGGAAGAGGCGAGTTGGTTGATGATCCTAAAGCTATAGC 494 Query 669 C-TTAAAGTATCTCTCTTCTTACTTCATCATTGATCTACTCTCTATCCTTCCTCTCCCAC 727 | || ||||||||||| || ||||||||||| ||| | |||||||||||||| ||||||| Sbjct 495 CATT-AAGTATCTCTCCTCCTACTTCATCATCGATGTTCTCTCTATCCTTCCACTCCCAC 553 Query 728 AGATAGTAGTTTTAGCCGTTAT-TCCAAGCGTCAACCAGCCAGTCTCTTTGCTAACAAAA 786 || | ||||| ||||| ||||| |||| |||||| |||| ||||||||| | || || Sbjct 554 AGCTTGTAGTCTTAGCTGTTATCCCCAA-TGTCAACAAGCCGGTCTCTTTGATCACTAAG 612 Query 787 GACTACCTTAAATT--T-TCCATAATTGCTCAATATGTTCCTC-GGATTCTCCGTATGTA 842 || || ||| ||| | | |||| || ||| ||| |||| | ||||||| ||||| || Sbjct 613 GAGTA-CTT-GATTACTGT-CATATTTACTCTATACATTCC-CAGGATTCTTCGTATTTA 668 Query 843 TCCGCTTTACACTGAAGTGACAAGAACATCTGGCATTGTTACTGAAACAGCATGGGCTGG 902 ||| |||||||||||||| ||||||||||||||||| ||||||||||| || |||||||| Sbjct 669 TCCACTTTACACTGAAGTTACAAGAACATCTGGCATAGTTACTGAAACCGCTTGGGCTGG 728 Query 903 AGCTGCTTGGAACCTCTCTCTCTATATGTTAGCCAGTCATGTGTTTGGAGCTTTATGGTA 962 ||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| Sbjct 729 AGCTGCTTGGAACCTATCTCTCTATATGTTAGCCAGTCATGTGTTTGGAGCGTTATGGTA 788 Query 963 CTTAATCTCAGTAGAACGAGAAGACAGATGCTGGCAAGAGGCATGCGAGAAGACA--A-A 1019 |||||| |||||||||||||||||||||||||||| || || |||||||||| | | | Sbjct 789 CTTAATATCAGTAGAACGAGAAGACAGATGCTGGCGTGAAGCTTGCGAGAAGATACCAGA 848 Query 1020 AGGT-TGTAA-TATGAAATTCCTCTACTGTGA---AAACGATCGTAACGTTAGCAACAAT 1074 || | |||| | | | ||| |||||||| || |||| | ||| ||||| ||| || Sbjct 849 AG-TATGTACCTTT-AGATTTCTCTACTGCGATGGAAAC-A--GTAGTGTTAGAAACGAT 903 Query 1075 TTCCTGACCA-CTTCTTGCCCATTTCTCGACCCTGGTGATATAACAAACTCAACCATCTT 1133 |||||||| | || | ||||| ||| || |||||| ||||||||| || ||||| |||| Sbjct 904 TTCCTGACAAACT-CGTGCCCGTTTATCAACCCTGATGATATAACGAATTCAACGGTCTT 962 Query 1134 CAACTTTGGCATCTTCACTGATGCTCTTAA-GAGTGGCG-TTGTTGAATCACATGATTTC 1191 ||||||||||||||| ||||||||| |||| |||||| | ||||||||||| |||||||| Sbjct 963 CAACTTTGGCATCTTTACTGATGCT-TTAAAGAGTGG-GATTGTTGAATCAGATGATTTC 1020 Query 1192 TGGAAGAAATTCTTCTACTGCTTCTGGTGGGGTCTT-CGAAATCTGAGTGCATTGGGACA 1250 |||||||| |||||||||||||||||||||||| || || ||| | |||||||||||||| Sbjct 1021 TGGAAGAAGTTCTTCTACTGCTTCTGGTGGGGT-TTGCGTAATTTAAGTGCATTGGGACA 1079 Query 1251 GAATCTCCAA-ACTAGCAAATTCGTTGGTGAAATCATATTTGCTATATCAATCTGCATAT 1309 |||||| || || |||||||||||||| |||||||| |||||| ||||||| ||||||| Sbjct 1080 AAATCTC-AATACGAGCAAATTCGTTGGGGAAATCATCTTTGCTGTATCAATTTGCATAT 1138 Query 1310 CTGGACTAGTCTTATTTGCTCTACTTATCGGCAATATGCAGAAATATTTGGAGTCAACAA 1369 |||||||||||||||| || |||||||||||||||||||||||||| ||||| || |||| Sbjct 1139 CTGGACTAGTCTTATTCGCACTACTTATCGGCAATATGCAGAAATACTTGGAATCGACAA 1198 Query 1370 CAGTTCGAGAAGAGGAAATGAGGGTGAGAAAGAGAGATGCAGAGCAGTGGATGTCTCATA 1429 ||||| | |||||||| ||||| |||||||| |||||||||||||| |||||||||||| Sbjct 1199 CAGTTAGGGAAGAGGAGATGAGAGTGAGAAAAAGAGATGCAGAGCAATGGATGTCTCATC 1258 Query 1430 GAATGTTACCTGAAGACCTGAGGAAACGTATCAGAAGATATGAACAATATAGATGGCAAG 1489 |||||||||| || ||| ||||||||||||||||||| ||||||||||||| |||||||| Sbjct 1259 GAATGTTACCCGATGACTTGAGGAAACGTATCAGAAGGTATGAACAATATAAATGGCAAG 1318 Query 1490 AGACAAGAGGAGTTGAAGAAGAAACCCTTCTTCGTAACCTCCCTAAAGACCTCAGAAGAG 1549 | || |||||||| |||||||||| |||||| ||||| ||||||||||||||||| |||| Sbjct 1319 AAACTAGAGGAGTCGAAGAAGAAAACCTTCTGCGTAATCTCCCTAAAGACCTCAGGAGAG 1378 Query 1550 ATATTAAACGCCATCTTTGCCTCGATCTCCTCAAGAAAGTACCTTTGTTTGAGATAATGG 1609 | || ||||||||| ||||||||||||| ||||||||||||||| |||| |||||||||| Sbjct 1379 ACATCAAACGCCATTTTTGCCTCGATCTTCTCAAGAAAGTACCTCTGTTCGAGATAATGG 1438 Query 1610 ATGAGCAGTTACTTGACGCGGTTTGCGATAGGCTAAGACCTGTGCTCTACACCGAGAACA 1669 ||||||| || || || || || || || | ||||| ||| ||||| ||||| ||||||| Sbjct 1439 ATGAGCAATTGCTAGATGCCGTGTGTGACAAGCTAAAACCCGTGCTATACACTGAGAACA 1498 Query 1670 GTTACGTGATCCGTGAAGGAGATCCTGTTGG-GGAAATGTTGTTTGTTATGAGAGGAAGA 1728 | || | || || |||||||| || || || ||| ||||||||||| |||||||||| | Sbjct 1499 GCTATGCAATTCGAGAAGGAGACCCAGT-GGAGGAGATGTTGTTTGTCATGAGAGGAAAA 1557 Query 1729 CTGGTAAGTGCCACCACTAATGGAGGAAGAAGTGGGTTCTTCAATGCCGTGA-ACCTAAA 1787 ||| | || |||||||| || || || | | || ||||| || ||||| | ||||||| Sbjct 1558 CTGATGAGCGCCACCACAAACGGTGGCCGGACCGGCTTCTTTAACGCCGT-ATACCTAAA 1616 Query 1788 GGCAAGTGA-TTTCTGCGGAGAAGATCTTCTCCCGTGGGCATTAGATCCTCAATCTTCTT 1846 | ||||| ||| ||||| |||||||||||| | |||||||| |||||||||||||| | Sbjct 1617 ACCTAGTGACTTT-TGCGGCGAAGATCTTCTCACATGGGCATTGGATCCTCAATCTTCGT 1675 Query 1847 CTCACTTTCCCATCTCGACAAGAACAGTTCAAGCTCTCACTGAAGTCGAAGCCTTTGCTC 1906 |||| ||||| || ||||| ||||||||||||||| | || ||||| |||||||||||| Sbjct 1676 CTCATTTTCCGATATCGACGAGAACAGTTCAAGCTTTAACCGAAGTAGAAGCCTTTGCTT 1735 Query 1907 TCA-CAGCTGAGGATCTCAAG-TCTGTCGCTTCACAATTCAGACGCCTCCATAGCAAGCA 1964 | | |||| || ||||||||| || || ||||||||||||||||| ||||||||||| || Sbjct 1736 T-AGCAGCAGATGATCTCAAGCTC-GTTGCTTCACAATTCAGACGACTCCATAGCAAACA 1793 Query 1965 ACTCCAACATACTTTTC-GGTTTTACTCAGTGCAATGGAGAACATGGAGCGTGTCTTTTA 2023 || ||||||||||| | ||||||| || || ||||||||||| ||| | | |||||| | Sbjct 1794 GCTTCAACATACTTT-CAGGTTTTATTCGGTACAATGGAGAACTTGGGGTGCGTCTTTCA 1852 Query 2024 TACAAGCAGCGTGGAGGAGATACTGTCGGAGGAAGTTAGCCAAGTCACTA-CGCGATGAA 2082 ||||||| |||||| ||||| | || |||||||| |||| | |||| || | ||| ||| Sbjct 1853 TACAAGCGGCGTGGCGGAGACATTGCCGGAGGAAACTAGCTAGGTCATTAAC-CGAAGAA 1911 Query 2083 GAAGATCG-TCTCCGAGAAGCG 2103 |||||||| | ||||||| ||| Sbjct 1912 GAAGATCGGT-TCCGAGACGCG 1932 > Ahg914276 jgi|Araly1|914276|Al_scaffold_0001_4530 Length=522 Score = 115 bits (62), Expect = 1e-24 Identities = 74/80 (93%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2108 CTAGTCAAGATAAAGAACACAATGCTGCAACCGTGTCGTCGTCCTTGAGCCTTGGAGGCG 2167 |||||||||||||||||| ||||||||||| | || |||||||||||||||||||||| Sbjct 83 CTAGTCAAGATAAAGAACGTAATGCTGCAACTGCATCTTCGTCCTTGAGCCTTGGAGGCG 24 Query 2168 CTCTTTACGCGTCGCGTTTC 2187 |||||||||||||||||||| Sbjct 23 CTCTTTACGCGTCGCGTTTC 4 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 90311970895 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5