BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G01620.1
Length=1308
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1 1469 0.0
Ahg943716 jgi|Araly1|943716|scaffold_604260.1 1005 0.0
Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1 730 0.0
Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2 726 0.0
Ahg492536 jgi|Araly1|492536|fgenesh2_kg.7__1969__AT4G23400.1 603 1e-171
Ahg480563 jgi|Araly1|480563|fgenesh2_kg.3__3264__AT2G16850.1 278 9e-74
> Ahg470115 jgi|Araly1|470115|fgenesh2_kg.1__69__AT1G01620.1
Length=1065
Score = 1469 bits (795), Expect = 0.0
Identities = 858/889 (97%), Gaps = 2/889 (0%)
Strand=Plus/Plus
Query 103 CACTTGAACGTTTTCT--AGATAGAGATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAG 160
||||| |||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 62 CACTTTAACGTTTTCTAGAGAGAGAGATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAG 121
Query 161 CTAACAAGTTCCCGGAGAGGCAACCGATAGGTACATCGGCTCAGACGGACAAAGACTACA 220
| ||||||||||| ||||||||||| ||||| || |||||||||||||||||||||||||
Sbjct 122 CGAACAAGTTCCCAGAGAGGCAACCCATAGGGACGTCGGCTCAGACGGACAAAGACTACA 181
Query 221 AGGAGCCACCACCAGCTCCATTTTTCGAGCCAGGCGAGCTGAGTTCGTGGTCCTTCTACA 280
|||||||||||||||||||| | ||||||||||||||||||||||| |||||||||||||
Sbjct 182 AGGAGCCACCACCAGCTCCACTGTTCGAGCCAGGCGAGCTGAGTTCATGGTCCTTCTACA 241
Query 281 GAGCCGGAATCGCCGAGTTCATAGCCACCTTCCTGTTTCTATACATAACAGTATTGACAG 340
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 242 GAGCCGGAATCGCCGAGTTCATAGCCACATTCCTGTTTCTATACATCACAGTATTGACAG 301
Query 341 TGATGGGAGTGAAGAGAGCACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTT 400
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 302 TGATGGGAGTGAAGAGAGCACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTT 361
Query 401 GGGCTTTCGGTGGCATGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGGC 460
||||||| || ||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 362 GGGCTTTTGGAGGCATGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGAC 421
Query 461 ACATAAACCCAGCGGTGACATTTGGTCTGTTCTTGGCTCGTAAGCTGTCATTGACGAGAG 520
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 422 ACATAAACCCAGCGGTGACATTTGGTCTGTTCTTGGCTCGTAAACTGTCATTGACGAGAG 481
Query 521 CTGTCTTTTACATCGTGATGCAATGTCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAG 580
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 CTGTCTTCTACATCGTGATGCAATGTCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAG 541
Query 581 GCTTCCAGCCAAATCCTTACCAAACTCTCGGCGGAGGAGCCAACACAGTCGCTCACGGCT 640
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 542 GCTTCCAGCCAAATCCTTACCAAACTCTCGGCGGAGGAGCCAACACCGTCGCTCACGGCT 601
Query 641 ACACTAAGGGCTCTGGTTTGGGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGG 700
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct 602 ACACTAAGGGCTCTGGTTTGGGCGCTGAGATCATCGGAACCTTCGTCCTTGTCTACACGG 661
Query 701 TCTTCTCCGCCACTGACGCCAAGAGAAGCGCTCGTGACTCCCACGTTCCGATTTTGGCAC 760
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
Sbjct 662 TCTTCTCCGCCACTGACGCCAAGAGAAGCGCTCGTGACTCCCACGTGCCGATTTTGGCTC 721
Query 761 CACTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAA 820
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 722 CACTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCGATAACCGGAA 781
Query 821 CAGGAATTAACCCAGCTAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTT 880
| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 782 CCGGAATCAACCCAGCAAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTT 841
Query 881 GGGACGACCACTGGATATTCTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTT 940
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 842 GGGACGACCACTGGATATTCTGGGTAGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTT 901
Query 941 ACCACCAACTTGTCATCAGAGCCATTCCATTCAAGTCCAGATCCTGATT 989
||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 902 ACCACCAACTTGTCATCAGAGCCATTCCATTCAAGTCCAGAACCTGATT 950
> Ahg943716 jgi|Araly1|943716|scaffold_604260.1
Length=987
Score = 1005 bits (544), Expect = 0.0
Identities = 753/855 (88%), Gaps = 9/855 (1%)
Strand=Plus/Plus
Query 127 ATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGAGGCAACCG 186
|||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 28 ATGGAAGGCAAAGAAGAAGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGAGGCAACCC 87
Query 187 ATAGGTACATCGGCTCAG---ACGGACAAAGACTACAAGGAGCCACCACCAGCTCCATTT 243
|| ||||||||||||||| || ||||| |||||||| |||||||| || || ||| |
Sbjct 88 ATCGGTACATCGGCTCAGTCCACCGACAAGGACTACAAAGAGCCACCCCCTGCACCACTG 147
Query 244 TTCGAGCCAGGCGAGCTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGAGTTCATA 303
|||||||| ||||||||||| || ||||||||||||||||||||||| || ||||||||
Sbjct 148 TTCGAGCCCGGCGAGCTGAGCTCATGGTCCTTCTACAGAGCCGGAATTGCTGAGTTCATT 207
Query 304 GCCACCTTCCTGTTTCTATACATAACAGTATTGACAGTGATGGGAGTGAAGAGAGCACCA 363
|| || ||||||||||| ||||| || || ||||| || |||||||||||||||||||||
Sbjct 208 GCTACTTTCCTGTTTCTCTACATCACTGTCTTGACTGTAATGGGAGTGAAGAGAGCACCA 267
Query 364 AACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCATGATCTTT 423
||||||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 268 AACATGTGTGCTTCTGTTGGAATCCAAGGCATCGCTTGGGCTTTTGGTGGCATGATCTTT 327
Query 424 GCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGGTGACATTT 483
|| ||||||||||||||||||||||| || ||||| ||||| ||||| ||||| |||||
Sbjct 328 GCTCTTGTCTACTGTACTGCTGGAATTTCAGGTGGACACATCAACCCTGCGGTTACATTC 387
Query 484 GGTCTGTTCTTGGCTCGTAAGCTGTCAT-TGACGAGAGCTGTCTTTTACATCG-TGATGC 541
||||||||||||||||| ||| |||| | |||| |||||||| || ||||| | | ||||
Sbjct 388 GGTCTGTTCTTGGCTCGGAAGTTGTC-TCTGACCAGAGCTGTGTTCTACAT-GATTATGC 445
Query 542 AATGTCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAAATCCTTACC 601
||||||||||||||||||| || || ||||| ||||| ||||||||||||| |||||||
Sbjct 446 AATGTCTCGGAGCCATCTGTGGTGCTGGAGTCGTCAAGGGCTTCCAGCCAACGCCTTACC 505
Query 602 AAACTCTCGGCGGAGGAGCCAACACAGTCGCTCACGGCTACACTAAGGGCTCTGGTTTGG 661
| |||||||| || || || ||||| ||||||||||||||||| ||||| ||||| | |
Sbjct 506 AGACTCTCGGTGGCGGTGCTAACACCGTCGCTCACGGCTACACCAAGGGTTCTGGACTCG 565
Query 662 GTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGCCACTGACGCCA 721
||||||| || |||||||||||||| || |||||||| |||||||||||||| |||||||
Sbjct 566 GTGCTGAAATCATCGGAACCTTCGTTCTCGTCTACACCGTCTTCTCCGCCACCGACGCCA 625
Query 722 AGAGAAGCGCTCGTGACTCCCACGTTCCGATTTTGGCACCACTCCCAATCGGATTCGCTG 781
|||||||||| |||||||| ||||||||||||||||| ||||||||||||||||| || |
Sbjct 626 AGAGAAGCGCCCGTGACTCACACGTTCCGATTTTGGCGCCACTCCCAATCGGATTTGCAG 685
Query 782 TGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAACCCAGCTAGGA 841
|||||||||| |||||||| || ||||| |||||||| || ||||| ||||||||||| |
Sbjct 686 TGTTCTTGGTACACTTGGCAACAATTCCGATCACCGGGACCGGAATCAACCCAGCTAGAA 745
Query 842 GTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCACTGGATATTCT 901
|||||||||| ||||| |||||||||||||||||| ||||||||||||| ||||| ||||
Sbjct 746 GTCTTGGAGCCGCAATTATCTACAACAAGGACCACTCTTGGGACGACCATTGGATTTTCT 805
Query 902 GGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCA-ACTTGTCATCAGA 960
|||| ||||||||||||||||||||||| || || || || ||||| | |||||||||||
Sbjct 806 GGGTTGGACCATTCATTGGAGCAGCTCTAGCAGCACTCTATCACCAGA-TTGTCATCAGA 864
Query 961 GCCATTCCATTCAAG 975
|| ||||| ||||||
Sbjct 865 GCGATTCCTTTCAAG 879
> Ahg483737 jgi|Araly1|483737|fgenesh2_kg.4__2797__AT2G45960.1
Length=1270
Score = 730 bits (395), Expect = 0.0
Identities = 716/872 (82%), Gaps = 18/872 (2%)
Strand=Plus/Plus
Query 119 AGATAGAGATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGA 178
||| |||||||||||| |||||||| |||||| |||| |||||||||||||| |||||||
Sbjct 137 AGAGAGAGATGGAAGGTAAAGAAGAAGATGTTAGAGTCGGAGCTAACAAGTTTCCGGAGA 196
Query 179 GGCAACCGATAGGTACATCGGCTCAGACG-GACAAAGACTACAAGGAGCCACCACCAGCT 237
||||||| || || || || ||||||| | ||||| |||||||||||||||||||| ||
Sbjct 197 GGCAACCTATCGGAACTTCTGCTCAGA-GCGACAAGGACTACAAGGAGCCACCACCTGCG 255
Query 238 CCATTTTTCGAGCCAGGCGAG-CTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGA 296
|| || |||||||| |||||| || ||||||||| |||| ||||| |||||||| ||
Sbjct 256 CCGTTGTTCGAGCCCGGCGAGATTG-CTTCGTGGTCATTCTGGAGAGCTGGAATCGCTGA 314
Query 297 GTTCATAGCCACCTTCCTGTTTCTATACATAACAGTATTGACAGTGATGGGAGTGAAGAG 356
|||||| || || || |||| || ||||| || || ||||| || ||||| ||||||||
Sbjct 315 GTTCATCGCTACGTTTTTGTTCCTGTACATCACTGTTTTGACTGTTATGGGTGTGAAGAG 374
Query 357 AG-CACCAAACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCA 415
| |||| ||||||||||| || || ||||||||||| || ||||||||||||||||| |
Sbjct 375 -GTCACCGAACATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTA 433
Query 416 TGATCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGG 475
||||||| || || |||||||| || ||||| ||||| ||||| ||||| ||||||||||
Sbjct 434 TGATCTTCGCTCTCGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCAGCGG 493
Query 476 TGACATTTGGTCTGTTCTTGGCTC-GTAAGCTGTCATTGACGA-GAGCTGTCTTTTACAT 533
| || || ||| ||||||| || | | ||||| || | || | ||||||| | |||||
Sbjct 494 TTACGTTCGGTTTGTTCTTAGC-CAGGAAGCTTTCGCTCAC-ACGAGCTGTGTACTACAT 551
Query 534 CGTGATGCAATGTC-TCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAA 592
|||||||| || | | ||||| ||||| || || || || ||||| || ||||| ||||
Sbjct 552 AGTGATGCAGTG-CTTAGGAGCTATCTGTGGAGCTGGTGTGGTCAAGGGGTTCCAACCAA 610
Query 593 ATCCTTACCAAACTCTCGGCGGAGGAGCCAACA-CAGTCGCTCACGGCTACACTAAGGGC 651
| | ||||| || | || || |||||||||| || | ||||| || ||||| || ||
Sbjct 611 AGCAATACCAGGCTTTGGGAGGTGGAGCCAACACCA-TAGCTCATGGTTACACAAAAGGA 669
Query 652 TCTGGT-TTGGGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGC 710
|||| || || |||||||| || |||||||| |||||||| ||||| |||||||| ||
Sbjct 670 AGTGGTCTT-GGAGCTGAGATTATTGGAACCTTTGTCCTTGTTTACACCGTCTTCTCAGC 728
Query 711 CACTGACGCCAAGAGAAGCGCTCGTGACTCCCACGTTCCGATTTTGGCACCACTCCCAAT 770
|||||| |||||||||| |||||||||||| || ||||| ||| | ||||| ||||||||
Sbjct 729 CACTGATGCCAAGAGAAACGCTCGTGACTCTCATGTTCCTATTCTAGCACCGCTCCCAAT 788
Query 771 CGGATTCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAA 830
||||||||||||||||||||||||||| || || || || ||||| ||||| ||||| ||
Sbjct 789 CGGATTCGCTGTGTTCTTGGTTCACTTAGCAACCATCCCCATCACTGGAACCGGAATCAA 848
Query 831 CCCAGCTAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCA 890
|||||| || |||||||||||||||||||| | |||||||||| |||| |||||||||||
Sbjct 849 CCCAGCAAGAAGTCTTGGAGCTGCAATCATTTTCAACAAGGACAACGCCTGGGACGACCA 908
Query 891 CTGGATATTCTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCA-AC 949
||| | || ||||| |||||||||||||| || || ||||| ||||| |||||| |
Sbjct 909 TTGGGTCTTTTGGGTTGGACCATTCATTGGTGCTGCACTTGCTGCTCTCTACCACGTTA- 967
Query 950 TTGTCATCAGAGCCATTCCATTCAAGTCCAGA 981
| |||||||||||||| |||||||||||||||
Sbjct 968 TAGTCATCAGAGCCATCCCATTCAAGTCCAGA 999
> Ahg486618 jgi|Araly1|486618|fgenesh2_kg.5__2610__AT3G61430.2
Length=1227
Score = 726 bits (393), Expect = 0.0
Identities = 708/862 (82%), Gaps = 14/862 (2%)
Strand=Plus/Plus
Query 127 ATGGAAGGGAAAGAAGAGGATGTTCGAGTGGGAGCTAACAAGTTCCCGGAGAGGCAACCG 186
|||||||| |||||||| || ||| |||| ||||||||||||||||||||||| |||||
Sbjct 178 ATGGAAGGCAAAGAAGAAGACGTTAGAGTTGGAGCTAACAAGTTCCCGGAGAGACAACCA 237
Query 187 ATAGGTACATCGGCTCAGACG-GACAAAGACTACAAGGAGCCACCACCAGCTCCATTTTT 245
|| || ||||| ||||||| | ||||| |||||||| || |||||||| ||||| |||||
Sbjct 238 ATCGGAACATCAGCTCAGA-GCGACAAGGACTACAATGAACCACCACCGGCTCCGTTTTT 296
Query 246 CGAGCCAGGCGAGCTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGAGTTCATAGC 305
|||||| || ||||| ||| |||||||| | ||||| || ||||| |||||||| ||
Sbjct 297 CGAGCCTGGTGAGCTTTCTTCATGGTCCTTTTGGAGAGCTGGGATCGCTGAGTTCATCGC 356
Query 306 CACCTTCCTGTTTCTATACATAACAGTATTGACAGTGATGGGAGTGAAGAGAG-CACCAA 364
|| ||||| || || ||||| || || ||||| || |||||||| || || | |||| |
Sbjct 357 TACTTTCCTCTTCCTCTACATCACTGTTTTGACTGTTATGGGAGTTAAAAG-GTCACCGA 415
Query 365 ACATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCATGATCTTTG 424
| |||||||| || || ||||||||||| || ||||||||||||||||| ||||||||||
Sbjct 416 ATATGTGTGCTTCCGTCGGAATCCAAGGAATCGCTTGGGCTTTCGGTGGTATGATCTTTG 475
Query 425 CCCTT-GTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGGTGACATTT 483
|||| |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| || |||
Sbjct 476 -CCTTAGTCTACTGCACCGCTGGTATCTCCGGTGGACACATCAACCCGGCGGTTACTTTT 534
Query 484 GGTCTGTTCTTGGCTCGTAAGCTGTC-ATTGACGAGAGCTGTCTTTTACATCGTGATGCA 542
||||||||||| || || |||||||| || || |||||| | | ||||| ||||||||
Sbjct 535 GGTCTGTTCTTAGCCCGGAAGCTGTCGCTT-ACCAGAGCTCTGTACTACATAGTGATGCA 593
Query 543 ATGTC-TCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAAATCCTTACC 601
|| | | ||||||||||| || || || || |||||||| |||||||| || | ||||
Sbjct 594 GTG-CTTGGGAGCCATCTGTGGTGCTGGCGTGGTCAAAGGATTCCAGCCTAAGCAATACC 652
Query 602 AAACTCTCGGCGGAGGAGCCAACACAGTCGCTCACGGCTACACTAAGGGCTCTGGT-TTG 660
| |||| || |||||||| ||||| || ||||| || ||||| || || |||| ||
Sbjct 653 AGGCTCTAGGAGGAGGAGCTAACACTGTGGCTCATGGTTACACCAAAGGAAGTGGTCTT- 711
Query 661 GGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGCCACTGACGCC 720
|| |||||||| || || || || |||||||| ||||| |||||||| || |||||||||
Sbjct 712 GGAGCTGAGATTATTGGCACTTTTGTCCTTGTATACACAGTCTTCTCAGCAACTGACGCC 771
Query 721 AAGAGAAGCGCTCGTGACTCCCACGTTCCGATT-TTGGCACCACTCCCAATCGGATTCGC 779
||||||| |||||||||||| || || || ||| || ||||||||||||||||| || ||
Sbjct 772 AAGAGAAACGCTCGTGACTCTCATGTCCCTATTCTT-GCACCACTCCCAATCGGGTTTGC 830
Query 780 TGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAACCCAGCTAG 839
|| ||||||||||||||||| || || |||||||| || ||||| || |||||||||||
Sbjct 831 GGTTTTCTTGGTTCACTTGGCAACCATCCCAATCACTGGCACAGGCATCAACCCAGCTAG 890
Query 840 GAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCACTGGATATT 899
||||||||||||||||||||||||||||| ||||| | ||||||||||||||| | ||
Sbjct 891 AAGTCTTGGAGCTGCAATCATCTACAACAAAGACCATTCATGGGACGACCACTGGGTGTT 950
Query 900 CTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCAACTTGTCATCAG 959
||||| ||||| ||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct 951 TTGGGTTGGACCCTTCATTGGAGCTGCACTTGCTGCTCTTTACCATGTGGTTGTCATCAG 1010
Query 960 AGCCATTCCATTCAAGTCCAGA 981
|||||| || ||||| ||||||
Sbjct 1011 AGCCATCCCTTTCAAATCCAGA 1032
> Ahg492536 jgi|Araly1|492536|fgenesh2_kg.7__1969__AT4G23400.1
Length=1105
Score = 603 bits (326), Expect = 1e-171
Identities = 689/865 (80%), Gaps = 21/865 (2%)
Strand=Plus/Plus
Query 127 ATGGAAGGG-AAAGAAGAGGATGTTCG-A-GTGGGAGCTAACAAGTTCCCGGAGAGGCAA 183
|||| |||| |||||||| || | | | | || ||||| ||||||||||||||||||||
Sbjct 26 ATGG-AGGGAAAAGAAGAAGACG-T-GAATGTCGGAGCCAACAAGTTCCCGGAGAGGCAG 82
Query 184 CCGATAGGTACATCGGCTCAGAC-G-GA-CAAAGACTACAAGGAGCCACCACCAGCTCCA 240
||||| ||||| |||| ||||| | || ||| ||||||||||| ||||| || || ||
Sbjct 83 CCGATCGGTACGGCGGCGCAGACAGAGAGCAAGGACTACAAGGAACCACCTCCGGCGCCG 142
Query 241 TTTTTCGAGCCAGGCGAGCTGAGTTCGTGGTCCTTCTACAGAGCCGGAATCGCCGAGTTC 300
|||||||| || |||||||| | || ||||| || |||||||| || || || ||||||
Sbjct 143 TTTTTCGAACCCGGCGAGCTCAAATCTTGGTCTTTTTACAGAGCAGGCATAGCTGAGTTC 202
Query 301 ATAGCCACCTTCCTGTTT-CTATACATAACAGTATTGACAGTGATGGGAGTGAAGAGAGC 359
|||||||| ||||| ||| || ||| | || || |||||||| ||||| || ||||||||
Sbjct 203 ATAGCCACTTTCCT-TTTCCTCTACGTCACCGTTTTGACAGTCATGGGCGTTAAGAGAGC 261
Query 360 ACCAAAC-ATGTGTGCCTCTGTTGGAATCCAAGGCATTGCTTGGGCTTTCGGTGGCATGA 418
|| || ||||||||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct 262 TCC-TACTATGTGTGCCTCTGTTGGAATCCAAGGCATCGCTTGGGCTTTTGGTGGCATGA 320
Query 419 TCTTTGCCCTTGTCTACTGTACTGCTGGAATCTCTGGTGGGCACATAAACCCAGCGGTGA 478
||||||| ||||| || ||||||||||||||||| || || || || || || || ||||
Sbjct 321 TCTTTGCTCTTGTTTATTGTACTGCTGGAATCTCAGGAGGACATATTAATCCGGCAGTGA 380
Query 479 CATTTGGTCTGTTCTTGGCTCGTAAGCTGTCATTGACGAGAGCTGTCTTTTACATCGTGA 538
| |||||| |||||||||| | ||| |||| || || |||||| | || ||||| || |
Sbjct 381 CTTTTGGTTTGTTCTTGGCGAGGAAGTTGTCTTTAACCAGAGCTCTGTTCTACATAGTAA 440
Query 539 TGCAATGTCTCGGAGCCATCTGCGGCGCCGGAGTTGTCAAAGGCTTCCAGCCAAATCCTT 598
|||| || || ||||| || || || || || || || ||||| || || ||| | ||
Sbjct 441 TGCAGTGCCTTGGAGCTATTTGTGGTGCTGGTGTGGTTAAAGGGTTTCAACCAGGGCTTT 500
Query 599 ACCAAACTC-TCGGCGGAGGAGCCAACACAGTCGCTCACGGCTACACTAAGGGCTCTGGT 657
|||| || | ||||| ||||| || || ||||| || ||||| ||||| || |||
Sbjct 501 ACCAGACGAAT-GGCGGTGGAGCAAATGTGGTGGCTCATGGTTACACAAAGGGTTCAGGT 559
Query 658 -TTGGGTGCTGAGATAATCGGAACCTTCGTCCTTGTCTACACGGTCTTCTCCGCCACTGA 716
|||| ||| ||||| | ||||| || || || || ||||| || ||||| || |||||
Sbjct 560 CTTGG-TGCAGAGATTGTTGGAACTTTTGTTCTGGTTTACACTGTTTTCTCAGCTACTGA 618
Query 717 CGCCAAGAGAAGCGCTC-GTGACTCCCACGTTCCGATTTTGGCACCACTCCCAATCGGAT 775
|| |||||||| || | | ||||| || || || || ||||| || || ||||| || |
Sbjct 619 TGCTAAGAGAAGTGC-CAGAGACTCTCATGTCCCTATCTTGGCTCCGCTTCCAATTGGGT 677
Query 776 TCGCTGTGTTCTTGGTTCACTTGGCGACGATTCCAATCACCGGAACAGGAATTAACCCAG 835
| ||||| |||||||| |||||||| || || |||||||| ||||| || |||||||| |
Sbjct 678 TTGCTGTCTTCTTGGTGCACTTGGCTACCATCCCAATCACTGGAACTGGCATTAACCCGG 737
Query 836 CTAGGAGTCTTGGAGCTGCAATCATCTACAACAAGGACCACGCTTGGGACGACCACTGGA 895
| |||||||| |||||||| |||||||||||||||| || |||||||| ||||| ||||
Sbjct 738 CCAGGAGTCTCGGAGCTGCCATCATCTACAACAAGGGTCATGCTTGGGATGACCATTGGA 797
Query 896 TATTCTGGGTCGGACCATTCATTGGAGCAGCTCTTGCGGCTCTTTACCACCA-ACTTGTC 954
| ||||||||||| |||||||| || || || ||||| ||||| ||||| || | | |||
Sbjct 798 TTTTCTGGGTCGGTCCATTCATCGGTGCTGCGCTTGCTGCTCTGTACCATCAGA-TAGTC 856
Query 955 ATCAGAGCCATTCCATTCAAGTCCA 979
|||||||| ||||| ||||||||||
Sbjct 857 ATCAGAGCTATTCCTTTCAAGTCCA 881
> Ahg480563 jgi|Araly1|480563|fgenesh2_kg.3__3264__AT2G16850.1
Length=1043
Score = 278 bits (150), Expect = 9e-74
Identities = 418/546 (77%), Gaps = 24/546 (4%)
Strand=Plus/Plus
Query 391 GGCATTGCTTGGG-CTTTCGGTGGCATGATCTTTGCCCTTGTCTACTGTACTGCTGGAAT 449
|||||||| |||| |||| |||||||||||||||| ||| || || || || || || ||
Sbjct 272 GGCATTGCATGGGCCTTT-GGTGGCATGATCTTTGTCCTCGTTTATTGCACCGCCGGTAT 330
Query 450 CTCTGGTGGGCACATAAACCCAGCGGTGACATTTGGTCTGTTCTTGGCTCGTAA-GCTGT 508
||| || || || || || ||||| ||||||||||||||||||||||||||||| | |||
Sbjct 331 CTCCGGAGGTCATATTAATCCAGCAGTGACATTTGGTCTGTTCTTGGCTCGTAAAG-TGT 389
Query 509 CATTGACG-AGAGCTGTCTTT-TACATCGTGA-TGCAATGTCTCGGAGCCATCTGCGGCG 565
|| | | ||||| || | ||||| ||| | || ||||| |||||||| || || |
Sbjct 390 CACTC-CTTAGAGCAGT-TGCATACATGGTGGCT-CAGTGTCTTGGAGCCATTTGTGGAG 446
Query 566 CCGGAGTTGTCAAAGGCTTCCA-GCCAAATCCTTACCAAAC-TCTCGGCGGAGGAGCCAA 623
||| | || ||| ||| | | | ||| ||| |||| ||| || || ||||| ||
Sbjct 447 TTGGACTCGTTGAAGCCTTT-ATGATGACTCCATAC-AAACGTCTAGGTGGCGGAGCTAA 504
Query 624 CACAGTCGCTCACGGCTACA-CTAAGGGCTCTGGT-TTGGGTGCTGAGATAATCGGAACC 681
||| || ||| | || || | | | || ||| | |||| ||||||||| || || ||
Sbjct 505 CACCGTAGCTGATGGTTATAGC-ACCGGAACTGCTCTTGG-TGCTGAGATTATTGGCACA 562
Query 682 TTCGTCCTTG-TCTACACGGTCTTCTCCGCCACTGACGCC-AAGAGAAGCGCTCGTGACT 739
|| ||| ||| | ||||| |||||||| ||||||||| || || |||||||| |||||||
Sbjct 563 TTTGTC-TTGGTTTACACTGTCTTCTCTGCCACTGAC-CCTAAAAGAAGCGCGCGTGACT 620
Query 740 CCCACGTTCCGATTTTGGCACCACTCCCAATCGGATTCGCTGTGTTCTTGGTTCACTTGG 799
| ||||| ||| ||||||| || | || || || ||||| |||||| |||| || ||||
Sbjct 621 CTCACGTCCCGGTTTTGGCTCCGTTACCTATTGGGTTCGCAGTGTTCATGGTGCATTTGG 680
Query 800 CGACGATTCCAATCACCGGAACAGGAATTAACCCAGCTAGGAGTCTT-GGAGCTGCAATC 858
| || || || ||||| ||||| |||||||| |||||||| || ||| || ||||| |
Sbjct 681 CTACTATCCCCATCACTGGAACTGGAATTAATCCAGCTAGAAG-CTTTGGTGCTGCTGTT 739
Query 859 ATCTACAACAAGGACCACGCTTGGGACGACCACTGGATATTCTGGGTCGGACCATTCATT 918
||||||||||| || | |||||||| ||||| ||||| || ||||| ||||||||| |
Sbjct 740 ATCTACAACAATGAAAAAGCTTGGGAGGACCATTGGATCTTTTGGGTTGGACCATTCGTG 799
Query 919 GGAGCA 924
||||||
Sbjct 800 GGAGCA 805
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 48911702511
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5