BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G01960.1
Length=5495
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470078 jgi|Araly1|470078|fgenesh2_kg.1__32__AT1G01960.1 9234 0.0
Ahg486560 jgi|Araly1|486560|fgenesh2_kg.5__2552__AT3G60860.1 2015 0.0
Ahg921870 jgi|Araly1|921870|scaffold_103151.1 695 0.0
> Ahg470078 jgi|Araly1|470078|fgenesh2_kg.1__32__AT1G01960.1
Length=5484
Score = 9234 bits (5000), Expect = 0.0
Identities = 5331/5492 (97%), Gaps = 18/5492 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCTACGGAAGTCGATTCCCGCTTAGGTCGAGTTGTTATCCCTGCTTTGGACAAG 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1 ATGGCTTCTACGGAAGTCGATTCCCGCTTAGGTCGAGTTGTTGTCCCTGCTTTGGACAAG 60
Query 61 GTCATTAAGAACGCCTCCTGGCGTAAGCACTCCAAGCTCGCCCACGAGTGCAAATCCGTC 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 61 GTCATTAAGAACGCCTCCTGGCGTAAGCACTCCAAGCTCGCTCACGAGTGCAAATCCGTC 120
Query 121 ATCGAACGCCTTAGATCCCCTGAAAATTCCTCTCCTGTTGCCGACTCTGAATCTGGATCC 180
||||||||||| ||||| || |||||||||||||| |||||||||||||| |||||||||
Sbjct 121 ATCGAACGCCTCAGATCGCCGGAAAATTCCTCTCCCGTTGCCGACTCTGATTCTGGATCC 180
Query 181 TCCATTCCTGGACCACTTCACGACGGAGGAGCCGCCGAATACTCTCTCGCCGAGTCCGAG 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 181 TCCATTCCTGGACCACTTCACGACGGAGGGGCCGCCGAATACTCTCTCGCCGAGTCCGAG 240
Query 241 ATCATCCTCAGCCCTCTCATCAACGCCTCCTCCACCGGCGTTCTCAAGATTGTCGATCCC 300
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 241 ATCATCCTCAGCCCTCTCATTAACGCCTCCTCCACCGGCGTTCTCAAAATTGTCGATCCG 300
Query 301 GCCGTTGATTGCATCCAGAAGCTTATTGCTCATGGCTACGTTCGCGGTGAGGCTGATCCC 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||
Sbjct 301 GCCGTTGATTGCATCCAGAAGCTTATTGCTCATGGCTATGTTCGCGGTGAGGCCGATCCC 360
Query 361 ACCGGCGGACCTGAGGCGCTACTCCTTTCCAAGCTCATTGAAACCATCTGCAAATGTCAC 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 361 ACCGGCGGACCTGAGGCGCTACTCCTTTCCAAGCTCATCGAAACCATCTGCAAATGTCAC 420
Query 421 GAGCTAGACGACGAAGGGCTCGAGTTGCTCGTGCTGAAGACGCTCTTGACTGCGGTAACT 480
||||||||||||||||| ||||||||||||||||||||||||||||| |||||||| |||
Sbjct 421 GAGCTAGACGACGAAGGACTCGAGTTGCTCGTGCTGAAGACGCTCTTAACTGCGGTCACT 480
Query 481 TCAATTTCCCTGAGGATCCATGGAGATTCTTTGCTACAGATCGTCAGGACTTGTTATGGT 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 TCAATTTCCCTGAGGATCCATGGAGATTCTTTGCTACAGATCGTCAGGACTTGTTATGGT 540
Query 541 ATCTACTTGGGAAGCAGAAACGTGGTTAATCAGGCGACTGCTAAAGCCTCGCTCGTGCAG 600
||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 541 ATCTACTTGGGAAGCAGAAACGTGGTTAACCAGGCGACTGCTAAGGCCTCGCTCGTGCAG 600
Query 601 ATGTCTGTTATCGTGTTCAGAAGAATGGAGGCAGATTCATCCACCGTCCCCATTCAGCCC 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 601 ATGTCTGTTATCGTGTTCAGAAGAATGGAGGCAGATTCATCCACTGTCCCCATTCAGCCC 660
Query 661 ATCGTCGTGGCCGAGCTGATGGAGCCCATGGACAAATCCGAATCAGACCCATCTACGACG 720
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 661 ATCGTCGTGGCCGAGCTGATGGAGCCCATGGACAAATCCGAATCAGACCCGTCTACGACG 720
Query 721 CAGTCTGTTCAAGGTTTCATTACCAAGATTATGCAGGACATTGACGGAGTCTTCAATTCA 780
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 721 CAGTCTGTTCAAGGTTTCATTACCAAGATTATGCAGGATATTGACGGAGTCTTCAATTCA 780
Query 781 GCTAACGCCAAGGGCACATTCGGCGGCCATGACGGGGCCTTCGAGACTTCATTGCCTGGC 840
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 GCTAACGCCAAGGGCACATTCGGCGGCCATGACGGGGCCTTCGAGACTTCATTGCCTGGG 840
Query 841 ACTGCCAATCCTACTGATTTGTTGGATTCTACTGATAAGGATATGTTGGATGCCAAGTAC 900
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 841 ACTGCCAATCCTACAGATTTGTTGGATTCTACTGATAAGGATATGTTGGATGCCAAGTAC 900
Query 901 TGGGAGATCAGTATGTATAAGTCGGCCCTCGAGGGAAGAAAAGGAGAGCTGGCCGATGGA 960
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 901 TGGGAGATCAGTATGTATAAGTCGGCCCTCGAGGGAAGAAAAGGGGAGCTGGCCGATGGA 960
Query 961 GAAGTGGAGAAAGACGATGATTCTGAAGTTCAGATTGGGAATAAGCTGAGAAGAGACGCC 1020
||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 961 GAAGTAGAGAAAGACGATGATTCTGAGGTTCAGATTGGGAATAAGCTGAGAAGAGACGCC 1020
Query 1021 TTCTTGGTTTTCAGGGCACTTTGCAAGCTGTCCATGAAGACGCCTCCCAAGGAAGATCCA 1080
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1021 TTCTTGGTTTTCAGGGCACTTTGCAAGCTGTCCATGAAGACGCCTCCCAAAGAAGATCCA 1080
Query 1081 GAGTTGATGAGAGGGAAGATTGTGGCTCTCGAGTTATTGAAGATTCTGCTTGAGAATGCC 1140
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1081 GAGTTGATGAGAGGGAAGATTGTGGCTCTCGAGTTATTGAAGATTCTGCTAGAGAATGCC 1140
Query 1141 GGTGCTGTCTTTAGAACCAGCGATAGGTTCTTAGGCGCCATCAAGCAGTATCTGTGTCTC 1200
|| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1141 GGGGCTGTCTTTAGAACCAGCGATAGGTTCTTAGGCGCCATCAAGCAGTATCTCTGTCTC 1200
Query 1201 TCCTTGCTGAAGAACAGTGCTTCAAATCTTATGATCATTTTCCAGCTTTCCTGCTCGATT 1260
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 TCCTTGCTGAAGAATAGTGCTTCAAATCTTATGATCATTTTCCAGCTTTCCTGCTCGATT 1260
Query 1261 TTACTTAGCTTGGTTTCGAGGTTTCGTGCTGGGCTGAAGGCAGAGATTGGGGTGTTCTTC 1320
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TTACTTAGCTTGGTTTCGAGATTTCGTGCTGGGCTGAAGGCAGAGATTGGGGTGTTCTTC 1320
Query 1321 CCTATGATTGTTCTAAGAGTATTAGAGAATGTTGCTCAACCTGATTTCCAACAGAAGATG 1380
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1321 CCTATGATTGTTCTAAGAGTATTGGAGAATGTTGCTCAACCTGATTTTCAACAGAAGATG 1380
Query 1381 ATAGTGCTTCGGTTCTTGGACAAGCTCTGCGTTGATTCACAGATTTTGGTAGATATCTTC 1440
||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1381 ATAGTGCTTCGTTTCCTGGACAAGCTCTGCTTTGATTCACAGATTTTGGTAGATATCTTC 1440
Query 1441 ATCAACTATGATTGCGATGTCAACTCATCCAATATATTTGAGAGGATGGTCAATGGTCTC 1500
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1441 ATCAACTATGATTGCGATGTCAACTCATCCAATATATTCGAGAGGATGGTCAATGGTCTC 1500
Query 1501 CTTAAGACTGCTCAAGGAGTGCCTCCTGGTACAGTTACTACCTTGTTGCCACCTCAGGAA 1560
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1501 CTTAAGACTGCTCAAGGAGTGCCTCCTGGTATAGTTACTACCTTGTTGCCACCTCAGGAA 1560
Query 1561 GCAGCCATGAAGCTTGAAGCCATGAAATGCTTAGTTGCTGTTTTAAGGTCTATGGGAGAC 1620
||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1561 GCATCTATGAAGCTTGAAGCCATGAAATGCTTAGTTGCTGTTTTAAGGTCTATGGGAGAC 1620
Query 1621 TGGGTGAATAAGCAGTTGCGTCTTCCAGATCCTTATTCGGCAAAAATGCTGGAAATTGTT 1680
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||| |
Sbjct 1621 TGGGTGAATAAGCAGTTGCGTCTTCCAGATCCTTATTCGGCAAAAATAATAGAAATTGAT 1680
Query 1681 GATAGAAATCTTGAAGAAGGAAGTCATCCAGTAGAAAATGGTAAGGGGGATGGAGGCCAT 1740
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 1681 GATAGAAATCTTGAAGAAGGAAGTCATCCGGTGGAAAATGGTAAGGGGGATGGAGGCCAT 1740
Query 1741 GGTGGTTTTGAAAGATCAGACTCTCAGTCTGAATTGTCCAGTGGGAATTCTGATGCCTTA 1800
|||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct 1741 GGTGGTTTTGAAAGATCAGAATCTCAGTCTGAATTGTCCAGTGGGACTTCTGATGCCTTA 1800
Query 1801 GCAATAGAGCAGCGCCGAGCTTACAAGCTTGAACTTCAGGAAGGTATTTCTATTTTCAAC 1860
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1801 GCAATAGAGCAGCGCCGAGCTTACAAGCTTGAACTTCAGGAAGGTATTTCTATTTTCAAC 1860
Query 1861 CAGAAACCTAAGAAAGGTATTGAATTTTTAATCAAGGCAAACAAGGTGGGGGACTCGCCA 1920
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1861 CAGAAACCTAAGAAAGGCATTGAATTTTTAATCAAGGCAAACAAGGTGGGGGACTCGCCA 1920
Query 1921 GAGGAAATAGCAGCTTTTCTCAAAGATGCATCAGGGTTGAACAAGACTTTGATAGGGGAT 1980
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1921 GAGGAAATAGCAGCTTTTCTCAAAGATGCATCAGGGTTGAACAAGACTTTGGTAGGGGAT 1980
Query 1981 TATCTGGGGGAAAGAGAAGACTTATCTCTGAAAGTGATGCATGCATATGTGGATTCTTTC 2040
|||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1981 TATCTGGGTGAAAGAGAAGACCTATCTCTGAAAGTGATGCATGCATATGTGGATTCTTTC 2040
Query 2041 GAATTTCAAGGCATGGAATTTGATGAGGCAATTCGAGCCTTTCTCCGGGGCTTTAGGCTG 2100
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 2041 GAATTTCAAGGCATGGAATTTGATGAGGCAATTCGAGCCTTTCTCCGAGGCTTTAGGCTG 2100
Query 2101 CCAGGAGAAGCACAAAAAATCGATCGTATAATGGAAAAATTTGCAGAGCGATTCTGTAAA 2160
||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct 2101 CCAGGAGAAGCACAAAAAATCGATCGTATCATGGAAAAATTTGCAGAGCGATACTGTAAA 2160
Query 2161 TGCAACCCAAAGGATTTTTCTAGCGCTGATACGGCATATGTCCTCGCTTACTCAGTCATT 2220
|| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2161 TGTAACCCAAAGGCTTTTTCTAGCGCTGATACGGCATATGTCCTTGCTTACTCAGTCATT 2220
Query 2221 TTGCTCAACACAGATGCACATAACCCTATGGTGAAGAGCAAGATGACAGCTGATGGTTTT 2280
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2221 TTGCTCAACACAGATGCACATAACCCTATGGTGAAGAGCAAGATGACAGCTGATGGTTTT 2280
Query 2281 ATTAGAAACAATCGTGGTATAGATGATGGGAAAGATTTGCCTGAGGAATATCTACGTGCA 2340
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2281 ATTAGAAATAATCGTGGTATAGATGATGGGAAAGATTTGCCTGAGGAATATCTACGTGCA 2340
Query 2341 TTATATGAAAGGATATCTAGAAATGAGATAAAGATGAAGGATGATGGTTTGGGTCCGCAG 2400
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2341 TTATATGAAAGGATATCTAGAAATGAGATAAAGATGAAGGACGATGGTTTGGGTCCGCAA 2400
Query 2401 CAGAAGCAGCCTACAAACTCAAGTAGATTACTTGGCTTAGATACTATCTTAAATATTGTT 2460
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2401 CAGAAGCAGCCGACAAACTCAAGTAGATTACTTGGCTTAGATACTATCTTGAATATTGTT 2460
Query 2461 GTTCCTAGGCGTGGTGACGATATGAACATGGAGACCAGTGATGATCTTATCAGGCATATG 2520
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2461 GTTCCTAGGCGTGGTGACGATATGTACATGGAGACCAGTGATGATCTTATCAGGCATATG 2520
Query 2521 CAAGAGAGATTTAAAGAAAAGGCTCGCAAATCTGAGTCAGTTTATTATGCAGCCTCGGAT 2580
|||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2521 CAAGAGAGGTTTAAAGAAAAAGCTCGCAAATCTGAGTCAGTTTATTATGCAGCCTCGGAT 2580
Query 2581 GTGATTATACTCAGATTTATGGTTGAGGTTTGTTGGGCTCCTATGTTGGCAGCTTTCAGT 2640
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2581 GTGGTTATACTCAGATTTATGGTTGAGGTTTGTTGGGCTCCTATGTTGGCAGCTTTCAGT 2640
Query 2641 GTTCCACTTGACCAGAGTGATGATGCAGTAATAACAACATTATGTCTGGAGGGTTTCCAT 2700
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2641 GTTCCACTTGACCAGAGTGATGATGCAGTAATTACAACATTATGTCTGGAGGGTTTCCAC 2700
Query 2701 CATGCCATCCATGTCACTTCTGTAATGTCCTTAAAAACGCACAGAGATGCCTTTGTGACT 2760
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 2701 CATGCCATCCATGTCACTTCTGTAATGTCCTTAAAAACGCACAGAGATGCTTTTGTGACT 2760
Query 2761 TCACTAGCAAAATTTACTTCCCTCCACTCTCCTGCTGATATCAAGCaaaaaaaCATTGAA 2820
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2761 TCACTAGCAAAATTTACTTCCCTCCACTCTCCTGCTGATATCAAGCAAAAAAACATTGAA 2820
Query 2821 GCAATAAAGGCAATAGTAAAACTGGCGGAGGAAGAAGGAAACTATCTACAAGATGCTTGG 2880
|| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 2821 GCCATAAAGGCAATAGTAAAACTGGCGGAGGAAGAAGGTAACTATCTACAAGATGCTTGG 2880
Query 2881 GAGCATATACTGACTTGTGTTTCACGGTTTGAGCATCTTCATCTCTTGGGGGAAGGAGCG 2940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2881 GAGCATATACTGACTTGTGTTTCACGGTTTGAGCATCTTCATCTCTTGGGGGAAGGAGCG 2940
Query 2941 CCTCCTGATGCCACTTTCTTTGCATTTCCTCAAACGGAGTCAGGAAACTCTCCACTGGCT 3000
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2941 CCTCCTGATGCCACTTTCTTTGCATTTCCTCAAACCGAGTCAGGAAACTCTCCACTGGCT 3000
Query 3001 AAGCCAAATTCCGTACCTGCAATTAAAGAAAGAGCACCTGGAAAACTTCAGTATGCTGCA 3060
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3001 AAGCCAAATTCCGTACCTGCAGTTAAAGAAAGAGCACCTGGAAAACTTCAGTATGCTGCA 3060
Query 3061 TCTGCTATGATAAGGGGTTCCTACGATGGTTCTGGTGTTGCTGGAAAGGCTTCTAATACA 3120
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3061 TCTGCTGTGATAAGGGGTTCCTACGATGGTTCCGGTGTTGCTGGAAAGGCTTCTAATACA 3120
Query 3121 GTGACATCTGAACAGATGAACAACTTGATATCTAATCTAAACTTGCTAGAACAAGTTGGT 3180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 3121 GTGACATCTGAACAGATGAACAACTTGATATCTAATCTGAACTTGCTAGAACAAGTTGGT 3180
Query 3181 GACATGAGTCGGATATTTACTCGTAGTCAAAGATTGAATAGTGAAGCCATAATTGACTTT 3240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3181 GACATGAGTCGGATATTTACTCGTAGTCAAAGATTGAATAGTGAAGCCATAATTGACTTT 3240
Query 3241 GTTAAAGCCCTCTGCAAAGTTTCCATGGATGAGTTACGATCTCCATCTGATCCACGGGTC 3300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3241 GTTAAAGCCCTCTGCAAAGTTTCCATGGATGAGTTACGATCTCCATCTGATCCACGGGTC 3300
Query 3301 TTCAGCCTAACAAAGATTGTGGAAATAGCGCACTATAACATGAACCGCATAAGACTTGTC 3360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3301 TTCAGCCTAACAAAGATTGTGGAAATAGCGCACTATAACATGAACCGCATAAGACTTGTC 3360
Query 3361 TGGTCGAGCATCTGGCATGTGCTCTCTGATTTCTTTGTGACTATTGGCTGTTCTGATAAC 3420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3361 TGGTCGAGCATCTGGCATGTGCTCTCCGATTTCTTTGTGACTATTGGCTGTTCTGATAAC 3420
Query 3421 CTCTCCATTGCAATTTTTGCAATGGATTCTTTGCGCCAGCTGTCTATGAAGTTCTTAGAG 3480
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 3421 CTCTCCATTGCAATATTTGCTATGGATTCTTTGCGCCAGCTGTCTATGAAGTTCTTAGAG 3480
Query 3481 CGGGAAGAGTTGGCGAATTATAACTTCCAAAATGAATTTATGAAGCCTTTTGTTGTTGTC 3540
|||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 3481 CGGGAAGAGTTGGCAAATTATAACTTCCAAAATGAATTTATGAAACCTTTTGTTGTTGTC 3540
Query 3541 ATGCGCAAAAGTGGTGCTGTTGAGATCAGGGAATTGATTATACGATGTGTCTCACAGATG 3600
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3541 ATGCGCAAAAGTGGTGCTGTTGAGATCAGGGAATTGATTATAAGATGTGTCTCACAGATG 3600
Query 3601 GTTTTATCCCGTGTTGACAATGTCAAGTCGGGATGGAAGAGTATGTTCATGATTTTCACG 3660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 3601 GTTTTATCCCGTGTTGACAATGTTAAGTCGGGATGGAAGAGTATGTTCATGATTTTCACG 3660
Query 3661 ACAGCAGCACATGATGCACATAAAAATATTGTGTTCCTGTCTTTTGAAATGGTTGAGAAG 3720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3661 ACAGCAGCACATGATGCACATAAAAATATTGTGTTCCTGTCTTTTGAAATGGTTGAGAAG 3720
Query 3721 ATTATCCGAGACTACTTCCCACACATCACGGAGACAGAGACAACCACCTTCACAGACTGT 3780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3721 ATTATCCGAGACTACTTCCCACACATCACGGAGACAGAGACAACCACCTTCACAGACTGT 3780
Query 3781 GTGAATTGCCTTGTTGCGTTCACCAATTGTAAATTTGAGAAAGATATTAGTCTCCAAGCC 3840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3781 GTGAATTGCCTTGTTGCGTTCACCAATTGTAAATTTGAGAAAGATATTAGTCTCCAAGCC 3840
Query 3841 ATTGCTTTCCTTCAGTATTGCGCAAGAAAACTTGCTGAAGGCTATGTTGGTTCGTCACTG 3900
|||||||||||||| || ||||||||||||||||||||||||||||||||||| |||| |
Sbjct 3841 ATTGCTTTCCTTCAATACTGCGCAAGAAAACTTGCTGAAGGCTATGTTGGTTCATCACAG 3900
Query 3901 AGGAGGAACCCACCATTATCTCCTCAGGGTGGAAAAATTGGAAAACAAGATAGTGGGAAG 3960
||||||||||| |||| |||||||||| ||||||||| |||||||||||| ||||| |||
Sbjct 3901 AGGAGGAACCCTCCATCATCTCCTCAGAGTGGAAAAAGTGGAAAACAAGACAGTGGAAAG 3960
Query 3961 TTTCTAGAAAGTGATGAACATTTGTATTCTTGGTTTCCACTGTTAGCCGGTTTATCTGAA 4020
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 3961 TTTCTAGAAAGTGACGAACATTTGTATTCTTGGTTCCCACTGTTAGCCGGTTTATCTGAA 4020
Query 4021 CTTAGTTTCGACCCAAGAGCAGAAATTAGGAAGGTTGCATTGAAAGTCCTGTTTGATACT 4080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4021 CTTAGTTTCGACCCAAGAGCAGAAATTAGGAAGGTTGCATTGAAAGTCCTGTTTGATACT 4080
Query 4081 CTGAGGAACCATGGTGACCATTTCAGTCTGGCGTTATGGGAACGGGTTTTTGAGTCTGTT 4140
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 4081 CTGAGGAACCATGGTGACCATTTCAGTCTTTCGTTATGGGAACGGGTTTTTGAGTCTGTT 4140
Query 4141 TTATTTCGAATATTCGACTATGTGCGTCAGGACGTTGACCCATCTGAGGATGATTCAACA 4200
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4141 TTATTTCGGATATTCGACTATGTGCGTCAGGACGTTGACCCATCTGAGGATGATTCAACA 4200
Query 4201 GATCAGAGAGGTTACAATGGTGAAGTCGACCAAGAGTCTTGGCTTTATGAGACATGCTCG 4260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4201 GATCAGAGAGGTTACAATGGTGAAGTCGACCAAGAGTCTTGGCTTTATGAGACATGCTCG 4260
Query 4261 TTAGCTCTACAGCTGGTTGTAGACCTCTTTGTAAATTTTTACAAGACGGTTAACCCTCTC 4320
|| ||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 4261 TTGGCTCTACAGCTAGTTGTAGACCTCTTTGTAAATTTCTACAAGACAGTTAACCCTCTC 4320
Query 4321 CTTAAGAAGGTACTGATGTTATTTGTAAGCTTGATAAAACGTCCTCACCAAAGTCTTGCT 4380
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 4321 CTTAAGAAGGTACTGATGTTATTCGTAAGCTTGATAAAACGTCCTCACCAAAGTCTTGCT 4380
Query 4381 GGTGCGGGTATTGCTGCGCTTGTCCGTCTGATGAGAGATGTCGGTCATCAATTCTCTAAC 4440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 4381 GGTGCGGGTATTGCTGCGCTTGTCCGTCTGATGAGAGATGTCGGTCATCAATTCTCTGAC 4440
Query 4441 GAACAATGGCTCGAGGTTGTGTCATGTATCAAAGAAGCAGCAGATGCTACATCCCCTGAC 4500
||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct 4441 GAACAATGGCTCGAGGTTGTGTCATGTATCAAAGAAGCAGCAGATGCTACAGCTCCTGAC 4500
Query 4501 TTCTCATACGTTACCAGTGAAGATTTGATGGAGGATGTAAGCAATGAGGACGAAACAAAC 4560
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 4501 TTCTCATACGTTACCAGTGAAGAATTGATGGAGGATGTAAGCAATGAGGACGAAACAAAT 4560
Query 4561 GATAATTCCAACGACGCACTGAGAAGAAGGAACAGGCAGCTTCATGCTGTCGTCACAGAT 4620
|||||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||
Sbjct 4561 GATAATTCCAACGACGCAATGAGAAGAAGGAACAGGCAGCTTCAAGCTGTCGTGGCAGAT 4620
Query 4621 GCCAAATCTAAAGCTTCAATTCAGATTTTTGTGATTCAGGCGGTAACAGATATCTACGAC 4680
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 4621 GCCAAATCAAAAGCTTCAATTCAGATCTTTGTGATTCAGGCGGTAACAGATATCTACGAC 4680
Query 4681 ATGTACCGTATGTCTCTCACAGCCAATCACATGTTGATGCTCTTCGACGCTATGCACGGC 4740
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4681 ATGTATCGTATGTCTCTCACAGCCAATCACATGTTGATGCTCTTCGACGCTATGCACGGC 4740
Query 4741 ATTGGATCCAACGCTCACAAAATCAACGCTGATCTACTCTTACGTTCCAAGCTCCAGGAG 4800
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4741 ATTGGATCCAACGCTCACAAAATCAACGCTGATCTACTCTTACGTTCCAAGCTCCAGGAG 4800
Query 4801 CTCGGGTCGTCCCTTGAATCCCAAGAAGCTCCTCTGCTGCGCCTGGAGAACGAATCTTTC 4860
||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4801 CTCGGGTTGTCCCCTGAATCCCAAGAAGCTCCTCTGCTGCGCCTGGAGAACGAATCTTTC 4860
Query 4861 CAAACATGTATGACCTTCTTAGACAACCTCATCTCAGATCAGCCTGTGGGTTACAACGAG 4920
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 4861 CAAACATGTATGACCTTCTTAGACAACCTCATCTCAGATCAGCCTGTGGGATACAACGAG 4920
Query 4921 GCTGAAATAGAATCCCACCTCATAAGCCTCTGCAGAGAGGTGTTAGAGTTCTACATAAAT 4980
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4921 GCTGAAATAGAAGCCCACCTCATAAGCCTCTGCAGAGAGGTGTTAGAGTTCTACATAAAT 4980
Query 4981 ATTTCATGTTCAAAGGAGCAGTCTTCAAGGTGGGCGGTTCCCTCGGGGTCAGGAAAAAAG 5040
||||||||||||||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct 4981 ATTTCATGTTCAAAGGAGCAGTCGTCTAGGTGGGCGGTGCCCTCGGGGTCGGGAAAAAAG 5040
Query 5041 AAAGAGCTAACAGCGCGGGCTCCGCTAGTGGTGGCTGCAATTCAGACATTGGGAAACATG 5100
|| ||||||||||| ||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 5041 AAGGAGCTAACAGCACGGGCTCCGCTAGTGGTGGCTGCAATTCAGACACTAGGAAACATG 5100
Query 5101 GGAGAGTCACTGTTCAAGAAGAACTTGCCGGAGTTGTTTCCATTGATAGCGACGTTGATA 5160
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 5101 GGAGAGTCACTGTTCAAGAAGAACTTGCCGGAGTTGTTTCCGTTGATAGCGACGTTGATA 5160
Query 5161 AGCTGTGAACATGGGTCAGGAGAGGTACAAGTAGCTCTTAGTGATATGCTTCAGACATCA 5220
|||||||||||||||||||| ||||| ||| ||||||| ||||| |||||||||||||||
Sbjct 5161 AGCTGTGAACATGGGTCAGGGGAGGTGCAAATAGCTCTAAGTGACATGCTTCAGACATCA 5220
Query 5221 ATGGGACCTGTTCTCCTCCGCTCTTGCTGCTAAATATCTATCTATCTCTCTGTAAGATTT 5280
|||||||||||| |||||||||||||||||||| ||||||||| |||| |||||||||
Sbjct 5221 ATGGGACCTGTTGTCCTCCGCTCTTGCTGCTAA-TATCTATCT--CTCT--GTAAGATTT 5275
Query 5281 CTTCATTTACTCCCTCGATTTTCATCATAATTCTGTTTGGGTCTTCT-TTGAGTTTTTAT 5339
|||||||| |||||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct 5276 CTTCATTTTCTCCCTCGATTTTCATCATAATTCAGTTTGGGTCTTCTCTTGAGTTTTTAT 5335
Query 5340 CACAAA-TTACTT-A----C---ATTGTTTGGTAGCCATGGGAAGAGATTAGTGTTCACG 5390
|||||| ||||| | | ||||||||||||||||||||||||||||| |||||||
Sbjct 5336 CACAAAATTACTACATTTGCTTCATTGTTTGGTAGCCATGGGAAGAGATTAGCGTTCACG 5395
Query 5391 AGGGAttttttttttAACTTTCTTATATGTAAATTGTAAAATATTAGACAGTCTGTGTTT 5450
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 5396 AGGGATTTTTTTCC---CTTTCTTATATGTAAATTGTAAAATATTAGACAGTCTGTGTTT 5452
Query 5451 TTGACACGTTGTTGCATAATAAGTCTTAGCAA 5482
||||||||||||||||||||||||||||||||
Sbjct 5453 TTGACACGTTGTTGCATAATAAGTCTTAGCAA 5484
> Ahg486560 jgi|Araly1|486560|fgenesh2_kg.5__2552__AT3G60860.1
Length=5558
Score = 2015 bits (1091), Expect = 0.0
Identities = 3083/4018 (77%), Gaps = 244/4018 (6%)
Strand=Plus/Plus
Query 1 ATGGCTT-CTACGGAAGTC-GATTCCCGCTTAG-GTCGAGTTGTTATC-CCTGCTTTGGA 56
||||||| || |||||| | |||||||| || | ||||||| | || | || ||||| ||
Sbjct 1 ATGGCTTCCT-CGGAAG-CTGATTCCCGATT-GAGTCGAGTCG-TAACACCAGCTTTAGA 56
Query 57 CAAGGTCATTAAGAACGCCTCCTGGCGTAAGCACTCCAAGCTCGCCCACGAGTGCAAATC 116
||| || | |||||||| || |||||||| ||||| |||||||| |||| |||||| |
Sbjct 57 GAAGATCGTCAAGAACGCGTCGTGGCGTAAACACTCGAAGCTCGCAAACGAATGCAAAGC 116
Query 117 CGTCATCGAACGCCTTAGATCCCCTG-A-AAAT-------TCC-TC-T-C-CTG-T--TG 160
|| ||||| || | || || | ||| | |||| ||| || | | ||| | ||
Sbjct 117 TGTTATCGAGCGGC-TAAATTCGCTGCAGAAATCACCACCTCCTTCGTCCTCTGCTGCTG 175
Query 161 CCGACTCTGAATCTGGA-TCCTCCATTCCTGGACCACTTCACGACGGAGGAGCCG-CCGA 218
| ||||| || || || ||||| |||| || |||||| ||||||| || || |||
Sbjct 176 CTGACTCCGAGCCT-GATTCCTCTGTTCCCGGTCCACTTAACGACGGTGG-TTCGATCGA 233
Query 219 ATACTCTCTCGCCGAGTCCGAGA-TCATCCTCAGCCCTCTCATCAACGCCTCCT-CCACC 276
||||| |||||||| || || | ||||| |||||||||| ||||| |||| | |||
Sbjct 234 GTACTCGCTCGCCGATTCTGA-ATTCATCTTCAGCCCTCTGATCAATGCCT-GTGGCACT 291
Query 277 GGCGTTC-TCAAGATTGTCGATCCCGCCGTTGATTGCATCCAGAAGCTTATTGCTCATGG 335
||| || |||||| |||| || || |||| ||||| ||||||||||| || |||||
Sbjct 292 GGC-CTCGCCAAGATCATCGAACCTGCTATTGACTGCATTCAGAAGCTTATCGCGCATGG 350
Query 336 CTACGTTCGCGGTGAGGCTGATCCC-ACCGGCGGACCTGAGGCGCTACTCCTTTCCAAGC 394
|||| ||| ||||| | || ||| |||| ||| | ||| | || ||||||| ||
Sbjct 351 CTACACTCGTGGTGAATCGGA-CCCGTCCGGTGGAGCGGAGTCCCTTCTCCTTTTTAAAT 409
Query 395 TCATTGAAACCATCTGCAAATGTCACGAGCTA-GACGACGAAGGGC-TCGAGTTG-CTCG 451
| || || || | || ||||| || || || || |||||| | | || ||| || |
Sbjct 410 TGATCGAGTCCGTTTGTAAATGCCATGATTTAGGA-GACGAA-TCCATTGAATTGCCT-G 466
Query 452 TGCTGAAGACGCTCTTGA-CTG-CGGTAACTTCAATTTCCCTGAGGATCCATGGAG-ATT 508
|| | ||||| | || | ||| | |||| || || || ||| |||||||||| | ||
Sbjct 467 TGTTAAAGACTATGTT-ATCTGCCATTAAC-TCCATCTCGCTGCGGATCCATGGCGAATG 524
Query 509 CTTTGCTACA-GATCGTCA-GGACTTGTTATGGTATCTACTTGGGAAGCAGAAACGTGGT 566
| ||||| || ||| || | | ||||| || | || ||||||||||||| |||||||||
Sbjct 525 C-TTGCT-CATGATTGT-ACGAACTTGCTACGACATTTACTTGGGAAGCAAAAACGTGGT 581
Query 567 TAATCAGGCGACTGCTAAAGCCTCGCTCG-TGCAGATGTCT-GTTATCGTGTTCAGAAGA 624
|||||| ||||||| || || ||||| | | ||||| || || || || ||| | |||
Sbjct 582 GAATCAGACGACTGCCAAGGCTTCGCT-GATCCAGAT-ACTGGTGATTGTTTTCCGGAGA 639
Query 625 ATGGAGGCAGATTCATCCACCGTCCCCATTCAGCCCATCGTCGTGGCCGAGCTGATGGAG 684
|||||||| ||||| || || || || |||||||| ||||| ||||| ||||| ||||||
Sbjct 640 ATGGAGGCGGATTCGTCAACAGTTCCAATTCAGCCGATCGTAGTGGCTGAGCTCATGGAG 699
Query 685 CCCA-TGGACAAATCCGAAT-CAGA-CCCATCTACGACGCAGTCTGTTCAAGGTTTCATT 741
||| | || ||||| | || | || | | | ||| ||| ||| || ||||| ||
Sbjct 700 -CCACTCGAAAAATCAG-ATGCGGATGGGA-CAATGACAAAGTTTGTGCAGGGTTTTATC 756
Query 742 ACCAAGATTATGCAGGACATTGACGGAGTCTTCAATTCAG-CTAACGCC---A--AGG-- 793
||||| || ||||| || |||||||| || || || | | | || ||| | |||
Sbjct 757 ACCAAAATCATGCAAGATATTGACGGCGTGTTGAA-CCCGAC-AATGCCAGGATCAGGAT 814
Query 794 --GCA-CA--TTC-GGCGGCCATGACGGGGCCT-TCGAGACT-TCATTGCCTGG-CACTG 844
| | || || || ||||| || |||| | | | |||| || | ||| |||
Sbjct 815 CAGGATCAGGCTCAGGGGGCCAAGATGGGGTATAT-GGGACTACCACAG--TGGTGACTA 871
Query 845 CCAATCCTACTGATTTGTTGGATTCTACTGATAAGGATATGTTGGATGCCAAGTACTGGG 904
| |||||||||||||||||||| || ||||||||||| |||||||| || ||||| ||||
Sbjct 872 CGAATCCTACTGATTTGTTGGACTCCACTGATAAGGACATGTTGGACGCTAAGTATTGGG 931
Query 905 AGATCAGTATGTATAAGTCGGCCCTCGAGGGAAGAAAAGGAGAGCTGGCCGATGGAGAAG 964
||||||||||||| ||||| || || |||||||| || || ||||| | || ||||| |
Sbjct 932 AGATCAGTATGTACAAGTCAGCTCTAGAGGGAAGGAAGGGGGAGCTAGTAGACGGAGACG 991
Query 965 -TG-GAGA-AAGACGATGATTCT-GAAGTTCAGATTGGGAATAAGCTGAGAAGAGACGCC 1020
|| |||| | || ||||||| | ||||||||||||| |||||||||| | ||||| |||
Sbjct 992 TTGAGAGAGATGATGATGATT-TAGAAGTTCAGATTGAGAATAAGCTGCGGAGAGATGCC 1050
Query 1021 TTCTTGGTTTTCAGGGCACTTTGCAAGCTGTCCATGAAGACGCCTCC-CA--AG-----G 1072
|| ||||||||||||| || || ||||| ||||||||| ||||||| | || |
Sbjct 1051 TTGATGGTTTTCAGGGCGCTGTGTAAGCTCTCCATGAAGGCGCCTCCAAAGGAGTCTTCG 1110
Query 1073 A-AGATCCAG-AGTTGATGAGAGGGAAGATTGTGGCTCTCGAGTTATTGAAGATTC-TGC 1129
| |||||| | ||| ||||||||||||||| ||||||| ||| | ||||||| || ||
Sbjct 1111 ACAGATCC-GCAGTCAATGAGAGGGAAGATTCTGGCTCTTGAGCTGTTGAAGA-TCTTG- 1167
Query 1130 TT-GAGAATGCCGGTGCTGTCTTTAGAACCAGCGATAGGTTCTT-AGGCGCCATCAAGCA 1187
|| || ||||| || ||||||||||| |||||||| ||||| || | | | ||||| |
Sbjct 1168 TTGGAAAATGCTGGAGCTGTCTTTAGGACCAGCGAGAGGTT-TTCACGTGATATCAAACG 1226
Query 1188 GTATCTGTGTCTCTCCTTGCTGAAGAACAGTGCTTCAAATCTTATGATCATTTTCCAGCT 1247
|||| ||||| | || ||| |||||||||| ||||| | ||||||||| || ||||||||
Sbjct 1227 GTATTTGTGTTTGTCGTTGTTGAAGAACAGCGCTTCTACTCTTATGATTATCTTCCAGCT 1286
Query 1248 TTCCTGCTCGATTTTAC-TTAGCT-TGGTTTCGAGGTTTCGTGCTGGGCTGAAGGCAGAG 1305
|| ||||| ||||| | |||| | ||||| | || || || ||||| | ||||| ||
Sbjct 1287 CTCTTGCTCTATTTT-CATTAG-TCTGGTTGCAAGATTCCGGGCTGGATTAAAGGCCGAA 1344
Query 1306 ATTGGGGTGTTCTTCCCTATGATTGTTCTAAGAGTAT-TAGAGAATGTTGCTCAACCTGA 1364
||||| || |||||||| ||||||||||| ||||| | | |||||||| ||||||||| |
Sbjct 1345 ATTGGAGTTTTCTTCCCAATGATTGTTCTTAGAGT-TGTGGAGAATGTAGCTCAACCTAA 1403
Query 1365 TTTCCAACAGAAGATGATAGTGCTTCGG-TTCTTGGACAAGCTCTGCGTT-GATTCACAG 1422
||| |||||||||||||| || |||||| ||||| |||||||| || || ||||| ||
Sbjct 1404 TTTTCAACAGAAGATGATTGTTCTTCGGTTTCTT-GACAAGCTTTG-TTTGGATTCCCAA 1461
Query 1423 ATTTTGGTAGATATCTTCATCAACTATGATTGCGATGTCAACTCATCCAATATATTTGAG 1482
|| | || ||||| ||| | ||||| ||||| ||||| || ||||| ||||| ||||||
Sbjct 1462 ATCCTAGTTGATATTTTCTTGAACTACGATTGTGATGTGAATTCATCAAATATTTTTGAG 1521
Query 1483 AGGATGGTCAATGGTCTCCTTAAGACTGCTCAAGGAGTGCCTCCTGGTACAGTTACTACC 1542
||||||||||||||||||||||| || |||||||| || |||||||||||| ||| ||
Sbjct 1522 AGGATGGTCAATGGTCTCCTTAAAACGGCTCAAGGGGTTACTCCTGGTACAGCTACAACG 1581
Query 1543 TTGTTGCCACCTCAGGAAGCAGCCATGAAGCTTGAAGCCATGAAATGCTTAGTTGCTGTT 1602
||||| ||||||||||| ||||| | ||| |||||||||||||||||| |||| || |
Sbjct 1582 TTGTTACCACCTCAGGAGGCAGCTACGAAACTTGAAGCCATGAAATGCCTAGTAGCCATA 1641
Query 1603 TT-AAGGTCTATGGGAGACTGGGTGAATAAGCAGTTGCGTCTTCCAGATCCTTATTCG-- 1659
|| || || |||||||| ||| |||| ||||||||||| || |||| | || ||||
Sbjct 1642 TTGAAA-TCAATGGGAGATTGGTTGAACAAGCAGTTGCGCCTGCCAGTTTCTAATTCATT 1700
Query 1660 GCAA-AAATGCTGGAAATTGTTGATAGAAATCTTGAAGAAGGAAGTCATCCAGTAGAA-A 1717
| || |||| ||| || ||||| | |||| | | ||||||| ||| | | |
Sbjct 1701 G-AATAAAT-CTG-AAGCAGTTGAGATCGATCTGGGACCCGGAAGTCC-CCAATTGGCTA 1756
Query 1718 ATGGTAAGGGGGATGGAGGCCATGGTGGTTTTGAAAGATCAGACTC-TCAGTCTGAAT-T 1775
|||| || | |||| || | || || ||| ||||| || | | ||||||| |
Sbjct 1757 ATGGAAATGCTGATG-AGAC--TGCTGAC----AAA--TCAGATTCCT-ATTCTGAATCT 1806
Query 1776 GTCCAGTG-GG-A-ATTCTGATGC-CTTAGCAATAGAGCAGCGCCGAGCTTACAAGCTTG 1831
|| || | || | || | ||||| || ||| || ||||||||||| |||||||| || |
Sbjct 1807 -TC-AG-GAGGTACAT-CAGATGCTCT-AGCTATCGAGCAGCGCCGGGCTTACAAACTCG 1861
Query 1832 AACTTCAGGAAGGTATTTCTATTTTCAACCAGAAACCTAAG-AAAGGTATTGAATTTTTA 1890
|||||||||||||||||||| |||| || | ||| || || ||||||||||| ||| |
Sbjct 1862 AACTTCAGGAAGGTATTTCTCTTTTTAATCGGAAGCC-AACTAAAGGTATTGAGTTTCTC 1920
Query 1891 ATCAAGGCAAACAAGGTGGGGGACTCGCCAGAGGAAATAGCAGCTTTTCTCAAAGATGCA 1950
||||| || |||||||| || || || || |||||||||| |||||||||||||||
Sbjct 1921 ATCAACGCGGGTAAGGTGGGTGAATCTCCTGAAGAAATAGCAGGTTTTCTCAAAGATGCG 1980
Query 1951 TCAGGGTTGAACAAGACTTTGATAGGGGATTATCTGGGGGAAAGAGAAGACTTATCTCTG 2010
|||||||| || || ||||||||||| |||||||| || ||||||||||| ||| ||||
Sbjct 1981 TCAGGGTTAAATAAAACTTTGATAGGTGATTATCTTGGAGAAAGAGAAGATTTACCTCTC 2040
Query 2011 AAAGTGATGCATGCATATGTGGATTCTTTCGAATTTC-AAGGCATGGAATTTGATGAGGC 2069
|| |||||||||||||||||||||||||| || |||| ||||||||||||||||||||||
Sbjct 2041 AAGGTGATGCATGCATATGTGGATTCTTTTGA-TTTCCAAGGCATGGAATTTGATGAGGC 2099
Query 2070 AATTCGAGCCTTTCTCCGG-GGCTTTAGGCTGCCAGGAGAAGCACAAAAAATCGATCGTA 2128
|||| || ||||||| | || |||| ||||||||||||||||||||| || ||||| |
Sbjct 2100 AATTAGAACCTTTCTT-GAAGGTTTTAAGCTGCCAGGAGAAGCACAAAAGATTGATCGAA 2158
Query 2129 TAATGGAAAAATTTGCAGAGCGATT-CTGTAAATGCAACCCAAAGGATTTTT-CTAGCGC 2186
| |||||||| ||||| || || || ||| || || || | |||| | ||| |||||||
Sbjct 2159 TCATGGAAAAGTTTGCTGAACG-TTACTGCAAGTGTAATTCTAAGG-TGTTTACTAGCGC 2216
Query 2187 TGATACGGCATATGTCCTCGCTTACTCAGTCATTTTGCTCAACACAGATGCACATAACCC 2246
||||| || ||||| || || || || || || ||||||| || ||||| || |||||
Sbjct 2217 AGATACAGCTTATGTTCTTGCATATTCTGTGATCATGCTCAATACTGATGCCCACAACCC 2276
Query 2247 TATGGTGAAGAGCAAGATGACAGCTGATGGTTTTATTAGAAACAATCGTGGTATAGATGA 2306
|||||||||| ||||||| | ||||||| ||||| |||||||||||||| ||||| ||
Sbjct 2277 CATGGTGAAGAACAAGATGTCTGCTGATGACTTTATCAGAAACAATCGTGGAATAGACGA 2336
Query 2307 TGGGAAAGATTTGCCTGAGGAATATC-T-ACG-T-GCATTATATGAAAGGATATCTA-GA 2361
|| |||||||| |||| ||| || | | | | | || | |||||||||||| | | |
Sbjct 2337 CGGAAAAGATTTACCTGCGGACTA-CATGA-GATCGC-TG-TATGAAAGGATAACAAAGC 2392
Query 2362 AATGAGATAAAGATGAAGGATGATGGTTTGGGTCCGCAGCAGAAGCAGC-CTACAAACTC 2420
| ||||||||||||||| || |||| ||| | ||| ||||| |||| | |||||||
Sbjct 2393 A-TGAGATAAAGATGAAAGAAGATGATTTACCTTTGCAACAGAAACAGCACG-CAAACTC 2450
Query 2421 AAGTAGATTACTTGGCTTAGATACTATCTTAAATATTGTTGTTCC-TAGGCG-TGGTGAC 2478
|| | | | ||||| || ||| ||| ||||| || || | ||| || || ||| ||
Sbjct 2451 AAACAAAATGCTTGGTTTGGATGGTATATTAAACATAGT-GATCCGTAAGCAATGGGGA- 2508
Query 2479 GATATGAACATG-G-AGACCAGTGATGATCTTATCAGGCATATGCAAGAG-AGATTTAAA 2535
||| | | ||| | | || ||||||||||| || | ||||||||||||| | ||||||
Sbjct 2509 GAT-TCAT-ATGCGGAAACAAGTGATGATCTGATGAAGCATATGCAAGAGCA-ATTTAAG 2565
Query 2536 GAAAAGGCTCGCAAATCTGAGTCAGTTTATTATGCAGCCT-CGGATGTGATTATACTCAG 2594
||||| ||||| ||||| |||||| || ||||| || | | |||||| |||| |||||
Sbjct 2566 GAAAAAGCTCGTAAATCAGAGTCAACCTACTATGCTGC-TACAGATGTGGTTATTCTCAG 2624
Query 2595 ATTTATGGTTGAGGTTTGTTGGGCTCCTATG-TTGGCAGCTTTCAGTGTTCCACTTGACC 2653
||||||| |||||| |||||||||||||||| ||| | || |||||||| || || ||||
Sbjct 2625 ATTTATGATTGAGGCTTGTTGGGCTCCTATGCTTG-CTGCATTCAGTGTGCCGCTAGACC 2683
Query 2654 AGAGTGATGAT--GC-AGTAATAACAACATTATGTCTGGAGGGTTTCCATCATGCCATCC 2710
||||||||||| | ||| || |||||| |||||| || || ||||| ||||| ||||
Sbjct 2684 AGAGTGATGATTTGATAGTGAT--CAACAT-ATGTCTTGAAGGCTTCCACCATGCAATCC 2740
Query 2711 ATGTCACTTCTGTA-ATGTCCTTAAAAACGCACAGAGATGCCTTTGTGACTTCACTAGCA 2769
||| |||||| || ||||| | || || || |||||||| |||||||||||||||||
Sbjct 2741 ATGCCACTTC-GTTGATGTCAATGAAGACCCATAGAGATGCTTTTGTGACTTCACTAGCG 2799
Query 2770 AAATTTACTTCCCTCCACTCTCCTGCTGATATCAAGCaaaaaaaCATTGAAGCAATAAAG 2829
|| || ||||| || ||||| || |||||||||||||| | ||| || ||||| || |||
Sbjct 2800 AAGTTCACTTCACTTCACTCCCCAGCTGATATCAAGCAGAGAAATATCGAAGCCATTAAG 2859
Query 2830 GCAATAGTAAAACTGGCGGAGGAAGAAGGAAACTATCTACAAGATGCTTGGGAGCATATA 2889
|| || | | ||| || || ||||| || |||||| | |||||||| |||||||||||
Sbjct 2860 GCGATTCTCAGACTTGCTGATGAAGAGGGCAACTATTTGCAAGATGCCTGGGAGCATATT 2919
Query 2890 CTGACTTGTGTTTCACGGTTTGAGCATCTTCATCTCTTGGGGGAAGGAGCGCCTCCTGAT 2949
|| ||||||||||| || |||||||| || ||||||||||| ||||| || ||||| |||
Sbjct 2920 CTAACTTGTGTTTCCCGTTTTGAGCAACTACATCTCTTGGGAGAAGGTGCTCCTCCAGAT 2979
Query 2950 GCCACTTTCTTTGCATTTCCT--CAAACGGAGTCAG-GAAACTCTCCA-CTGGCTAAGCC 3005
|||||||| ||||| || || |||| ||||||| |||| || | | | || |
Sbjct 2980 GCCACTTTTTTTGC-TT-CCAAGCAAAATGAGTCAGAGAAA-TCAA-AGCAACCCAAAC- 3034
Query 3006 AA-AT-TCCGTACCTGCAATTAAA-GAAAGAGCACCTGG-AAAACTTCAGTATGCTGC-A 3060
|| || | | | |||| | ||| | ||| | ||||| |||| | || ||||| || |
Sbjct 3035 AATATATACTT-CCTGTTCTGAAAAGGAAGGGT-CCTGGGAAAAGT-CAATATGCAGCTA 3091
Query 3061 TCTGCTATGATAAGGGGTTCCTACGATGGTTCTG-GTGTTG-CTGGAAA-GGCTTCTAAT 3117
| | | | | |||||||| ||||| | || || ||| | ||||| || ||||||
Sbjct 3092 -CAGGTGTCTTGAGGGGTTCATACGACAGCA-TGAGTCTTGGC-GGAAAAGG-TTCTAAG 3147
Query 3118 A-CAGTGACATCT-GAACAGATGAACAACTTGATA-TCT-AA-TCTAAACTTGCTAGAAC 3172
| | |||| | | ||||| |||| || | ||| ||| || | | |||||| | || |
Sbjct 3148 AAC-GTGAGA-CAAGAACAAATGAGCAG-T--ATAGTCTCAAATTTGAACTTGTTGGAGC 3202
Query 3173 AAGTTGGTGACATGAGTCGGATATTTACTC-GTAGTCA-AAGATTGAATAGTGAAGCCAT 3230
| |||||||| |||| || |||||| ||| | ||||| || | | || |||||||| ||
Sbjct 3203 AGGTTGGTGAAATGAATCAAATATTTTCTCAG-AGTCAGAA-ACTAAACAGTGAAGCTAT 3260
Query 3231 AATTGACTTTGTTAAAGCCCTCTGCAAAGTTTCCATGGATGAGTTACGATCTCCATCTGA 3290
||| |||||||||||||| |||||||||||||| ||||||||||| || ||||| ||| |
Sbjct 3261 AATAGACTTTGTTAAAGCTCTCTGCAAAGTTTCTATGGATGAGTTGCGGTCTCCTTCTAA 3320
Query 3291 TCCACGGGTCTTCAGCCTAACAAAGATTGTGGAAATAGCGCACTATAACATGAACCGCAT 3350
|||||| || || ||||| || |||||||| || |||||||| |||||||||||||||||
Sbjct 3321 TCCACGCGTTTTTAGCCTCACGAAGATTGTTGAGATAGCGCATTATAACATGAACCGCAT 3380
Query 3351 AAGACTTGTCTGGTCGAGCATCTGGCATGTGCTCTCTGATTTCTTTGTGACTATTGGCTG 3410
||| ||||| ||||| ||||||||||| || || || | |||||||||||| ||||| ||
Sbjct 3381 AAGGCTTGTTTGGTCAAGCATCTGGCAAGTTCTATCGGGTTTCTTTGTGACCATTGGATG 3440
Query 3411 TTCTGATAACCTCTCCATTGCAATTTTTGCAATGGATTCTTTGCGCCAGCTGTCTATGAA 3470
|| || || || || |||||||| ||||||||||||||| |||||||| |||| |||||
Sbjct 3441 CTCAGAGAATCTTTCTATTGCAATATTTGCAATGGATTCTCTGCGCCAGTTGTCAATGAA 3500
Query 3471 GTTCTTAGAGCGGGAAGAGTTGGCGAATTATAACTTCCAAAATGAATTTATGA-AGCCTT 3529
||| | || ||||| |||||||| ||||| ||||||||||| || ||||||| | ||||
Sbjct 3501 ATTCCTGGAACGGGAGGAGTTGGCTAATTACAACTTCCAAAACGAGTTTATGACA-CCTT 3559
Query 3530 TTGTTGTTGTCATGCGCAAAAGTGGTGCTGTTGAGATCAGGGAA-TTGATTATACGATGT 3588
|||| | || ||||| | |||| || |||||||||||| ||| || || || || |||
Sbjct 3560 TTGTCATCGTTATGCGTAGAAGTAATGATGTTGAGATCAGAGAACTT-ATCATCCGGTGT 3618
Query 3589 GTCTCACAGATGGTTTTATCCCGTGTTGACAATGTCAAGTCGGGATGGAAGAGTATGTTC 3648
|| || |||||||| || || ||||| | ||||| ||||| |||||||| || |||||
Sbjct 3619 GTTTCTCAGATGGTATTGTCGCGTGTAAATAATGTTAAGTCAGGATGGAAAAGCATGTTT 3678
Query 3649 ATGATTTTCACGACAGCAGCACATGATGCAC-ATAAAAATATTGTGTTCCTGTCTTTTGA 3707
||| |||| || ||||| || |||||| || | ||||| |||||||| |||| |||||
Sbjct 3679 ATGGTTTTTACCACAGCGGCGTATGATG-ACCACAAAAACATTGTGTTTTTGTCCTTTGA 3737
Query 3708 AATGGTTGAGAAGATTATCCGAGACTACTTCCCACACATCACGGAGACAGAGACAACCAC 3767
||| | ||||||||||| ||||| || |||||| ||||||| |||||||| || |||||
Sbjct 3738 AATTATCGAGAAGATTATTCGAGAATATTTCCCATACATCACTGAGACAGAAACCACCAC 3797
Query 3768 CTTCACAGACTGTGTGAATTGCCTTGTTGCGTTCACCAATTGTAAATTTGAGAAAG-ATA 3826
|| ||||| |||||||||||||| |||| ||||||||| | |||| || ||| |||
Sbjct 3798 TTTTACAGATTGTGTGAATTGCCTAATTGCATTCACCAATAACAGATTT-AGCAAGGATA 3856
Query 3827 TTAGTCTCCAAGC-C-ATTGCTTTCCTTC-AGTATTGCGCAAGAAAACTTGCTGAAGG 3881
| |||||| | | | || |||||||| | | ||||| |||| ||| ||||| |||||
Sbjct 3857 TCAGTCTC-A-GTTCTATAGCTTTCCTCCGA-TATTGTGCAACAAAGCTTGCAGAAGG 3911
> Ahg921870 jgi|Araly1|921870|scaffold_103151.1
Length=595
Score = 695 bits (376), Expect = 0.0
Identities = 427/451 (95%), Gaps = 5/451 (1%)
Strand=Plus/Plus
Query 135 ATC-CCCTGAAAATTCCTCTCCTGTTGCCGACTCTGAATCTGGATCCTCCATTCCTGGAC 193
||| ||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||
Sbjct 107 ATCGCCC-GAAAATTCTTCTCCCGTTGCCGACTCTGATTCTGGATCCTCCATTCCTGGAC 165
Query 194 CACTTCACGACGGAGGAGCCGCCGAATACTCTCTCGCCGAGTCCGAGATCATCCTCAGCC 253
|||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||
Sbjct 166 CACTTCACGACGGAGGAGCCGCCGAATATTCTCTCGCCGAACCCGAGATCATCCTCAGCC 225
Query 254 CTCTCATCAACGCCTCCTCCACCGGCGTTCTCAAGATTGTCGATCCCGCCGTTGATTGCA 313
||||||| |||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct 226 CTCTCATTAACGCCTCCTCCACCGGCGTTCTCAAAATTGTCGATCCGGCCGTTGATTGCA 285
Query 314 TCCAGAAGCTTATTGCTCATGGCTACGTTCGCGGTGAGGCTGATCCCACCGGCGGACCTG 373
|||| |||||||||||||||||||| |||||| |||||| ||||||||||||||||||
Sbjct 286 TCCACAAGCTTATTGCTCATGGCTATGTTCGCAGTGAGG---ATCCCACCGGCGGACCTG 342
Query 374 AGGCGCTACTCCTTTCCAAGCTCATTGAAACCATCTGCAAATGTCACGAGCTAGACGACG 433
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 343 AGGCGCTACTCCTTTCCAAGCTCATCGAAACCATCTGCAAATGTCACGAGCTAGACGACG 402
Query 434 AAGGGCTCGAGTTGCTCGTGCTGAAGACGCTCTTGACTGCGGTAACTTCAATTTCCCTGA 493
|||| ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 403 AAGGACTCGAGTTGCTCGTGCTGAAGACGCTCTTAACTGCGGTCACTTCAATTTCCCTGA 462
Query 494 GGATCCATGGAGATTCTTTGCTACAGATCGTCAGGACTTGTTATGGTATCTACTTGGGAA 553
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 463 GGATCCATGGAGATTCTTTGCTGCAGATCGTCAGGACTTGTTATGGCATCTACTTGGGAA 522
Query 554 GCAGAAACGTGGTTAATCAGGCGACTGCTAA 584
|||||||||||||||| ||||||||||||||
Sbjct 523 GCAGAAACGTGGTTAACCAGGCGACTGCTAA 553
Score = 154 bits (83), Expect = 7e-36
Identities = 85/86 (99%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 1 ATGGCTTCTACGGAAGTCGATTCCCGCTTAGGTCGAGTTGTTATCCCTGCTTTGGACAAG 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 21 ATGGCTTCTACGGAAGTCGATTCCCGCTTAGGTCGAGTTGTTATCCCAGCTTTGGACAAG 80
Query 61 GTCATTAAGAACGCCTCCTGGCGTAA 86
||||||||||||||||||||||||||
Sbjct 81 GTCATTAAGAACGCCTCCTGGCGTAA 106
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 208098809164
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5