BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G02190.1 Length=2173 Score E Sequences producing significant alignments: (Bits) Value Ahg470048 jgi|Araly1|470048|fgenesh2_kg.1__2__AT1G02190.2 3055 0.0 Ahg321478 jgi|Araly1|321478|fgenesh1_pm.C_scaffold_4001535 553 2e-156 Ahg923354 jgi|Araly1|923354|scaffold_104635.1 414 1e-114 Ahg923356 jgi|Araly1|923356|scaffold_104637.1 117 4e-25 > Ahg470048 jgi|Araly1|470048|fgenesh2_kg.1__2__AT1G02190.2 Length=2131 Score = 3055 bits (1654), Expect = 0.0 Identities = 2022/2188 (92%), Gaps = 72/2188 (3%) Strand=Plus/Plus Query 1 ACATTATAAACAAGTACCTCCAAATTGCACTTCCTTCAAACTTATTCGACAGTAGACTAG 60 ||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1 ACATTCTAAACAAGTACCTCCAAATTGCACTTCCTTCAAACTTCTTCGACAGTAGACTAG 60 Query 61 CTCAAGTACCTTTGGATGGCGTCGAGGCCCGGAGCTCTTACGGAGTGGCCATGGAGTCCC 120 |||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||||| Sbjct 61 CTCAAGTACCTTTGGATGGCATTGAGACCCGGAGCTCTTACGGAGTGGCCATGGAGTCCC 120 Query 121 CTTGGTAGCTTCAAGTACCTCTTGGTGGCCCCGTTGGTGATGGCGAGCATGCACTCGTAC 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 121 CTTGGTAGCTTCAAGTACCTCTTGGTGGCCCCGTTGGTGATGGCGAGCATGCACTCGTAC 180 Query 181 GTGA---CGGCTGTGGATGAGGAGAAAGACCTCAGCAGACTTATGATAGTCGTGTTGATG 237 |||| ||||||||||||||||||||||||||| |||||| |||||||||||||||| | Sbjct 181 GTGACGGCGGCTGTGGATGAGGAGAAAGACCTCACCAGACTGATGATAGTCGTGTTGACG 240 Query 238 CTGTGGAGAATAGTTCACAGCCAGATATGGATCAGCGTGTCTCGCCAGAGGACGGCTAAG 297 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 CTGTGGCGAATAGTTCACAGCCAGATATGGATCAGCGTGTCTCGCCAGAGGACGGCTAAG 300 Query 298 GGAACGAACAAGATCGTGGACAAGCCCATTGAGTTTGAGCAAGTGGACCGAGAGCGCACT 357 |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || Sbjct 301 GGAACGAACAAGATCGTGTACAAGCCCATTGAGTTCGAGCAAGTGGACCGAGAGCGCTCT 360 Query 358 TGGGACGACCAAGTCATCTTCAACACTCTCCTCATGTATCTCGCAAACATCAAGCTCCCA 417 |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 361 TGGGACGACCAAATCATCTTCAACACTCTCCTCATGTATCTCGCAAACATCAAGCTCCCA 420 Query 418 GGCGCCTCCCACCTTCCCCCATGGAGGCTAGACGGGGCCATCCTCATGGCTCTACTTCAC 477 |||||||||||||||||||| ||||| ||||| || |||||||||||||||||||||||| Sbjct 421 GGCGCCTCCCACCTTCCCCCCTGGAGACTAGATGGAGCCATCCTCATGGCTCTACTTCAC 480 Query 478 GCTGGTCCCGTCGAGTTTCTCTACTACTGGTTTCACAGAGCTCTCCACCACCATTTCCTC 537 || | | ||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct 481 GC---T---G--GAGTTCCTCTACTACTGGTTCCACAGAGCTCTCCACCACCATTTCCTC 532 Query 538 TACTCTCGCTACCATTCTCACCACCACTCCTCCATTGTCACCGAGCCCATCACGTCTGTG 597 |||||||||||||||||||||||||| | ||| | |||| |||||| Sbjct 533 TACTCTCGCTACCATTCTCACCACCA-T--TCC----T--------CCAT----TCTGTG 573 Query 598 GTGCACCCCTTCGCCGAGCACATCGCCTACACACTACTCTTTGCCATACCTATGGTAACG 657 ||||||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| Sbjct 574 GTGCACCCCTTCGCCGAACACATCGCCTACTCACTACTCTTTGCCATACCCATGGTAACG 633 Query 658 GCGTCCCTGTGTGGGATCCTCTCCATCGTTTCCATCATGGGATACATTACTTACATTGAC 717 |||||||||||||||||||||||||| ||||||||||| | ||||||||||||||||||| Sbjct 634 GCGTCCCTGTGTGGGATCCTCTCCATTGTTTCCATCATTGCATACATTACTTACATTGAC 693 Query 718 TTCATGAACAACATGGGACATTGCAACTTCGAGCTTTTCCCTAAGCGTCTCTTCCACCTC 777 ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| Sbjct 694 TTCATGAACAACATGGGACATTGTAACTTCGAGGTTTTCCCTAAGCGTCTCTTCCACCTC 753 Query 778 TTCCCTCCCCTCAAGTTCCTCTGTTACACCCCCTCGTTTCACTCGCTCCACCACACGCAG 837 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 754 TTCCCTCCCCTCAAGTTCCTCTGCTACACCCCCTCGTTTCACTCGCTCCACCACACGCAG 813 Query 838 TTCCGGACCAACTACTCTCTGTTCATGCCAATATACGACTTCATCTACGGGACGACTGAT 897 |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 814 TTCCGGACCAACTACTCTCTGTTCATGCCAATATACGACTACATCTACGGGACGACTGAT 873 Query 898 AATTTGACCGACTCACTATACGAGAGGTCGTTGGAGATAGAGGAAGAATCACCCGACGTC 957 ||||||||||| ||| ||||||||||||||||||||| ||||||||||||||||||| || Sbjct 874 AATTTGACCGAGTCATTATACGAGAGGTCGTTGGAGAGAGAGGAAGAATCACCCGACATC 933 Query 958 ATCCACCTCACTCACCTCACCACACACAACTCCATCTACCAAATGCGCCTTGGTTTCCCG 1017 || |||||||||||||| ||||||| | | |||||||||||||||||||||||||||||| Sbjct 934 ATTCACCTCACTCACCTTACCACACGCGATTCCATCTACCAAATGCGCCTTGGTTTCCCG 993 Query 1018 TCCCTCTCCTCTTGCCCCTTGTGGTCTCGACCCCCATGGTACCTCACATGCTTCATGTGG 1077 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct 994 TCCCTCTCCTCTTGCCCCTTATGGTCTCGATCCCCATGGTACCTCACATGCTTCATGTGG 1053 Query 1078 CCCTTCACTCTCCTCTGCTCATTTGCCCTCACTTCAGCTATC-CCTTTGCGCACCTTTGT 1136 ||||||||||||||||||||||||| ||||| || ||| || || | |||||||||||| Sbjct 1054 CCCTTCACTCTCCTCTGCTCATTTGTGCTCACCTCCGCTCTCTCC-TCGCGCACCTTTGT 1112 Query 1137 CTTTGAGCGAAACCGTCTCCGTGACCTCACCGTTCACTCTCACCTCCTTCCCAAGTTTTC 1196 |||||||||||||||||||||||| |||||| |||||||||||||||||||||| Sbjct 1113 CTTTGAGCGAAACCGTCTCCGTGATCTCACCCTTCACTCTCACCTCCTTCCCAA------ 1166 Query 1197 CTTTCACTATAAATCACAGCGCCACCATGAGTCCATCAACACTATCATAGAGGAAGCTAT 1256 |||| |||||||||||| ||||||||||||||||||||||| |||||||||||||| ||| Sbjct 1167 CTTTTACTATAAATCACTGCGCCACCATGAGTCCATCAACAATATCATAGAGGAAGTTAT 1226 Query 1257 CCTTGAAGCAGATGAAAAGGGTGTGAAAGTAATGAGTCTTGGCCTGATGAACAATAGGGA 1316 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1227 TCTTGAAGCAGATGAAAAGGGTGTGAAAGTAATCAGTCTTGGCCTGATGAACAATAGGGA 1286 Query 1317 GGAACTAAACGGGTCTGGAGAAATGTACGTGCAAAAGTATCCGAAGTTGAAGATAAGACT 1376 |||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 1287 GGAACTAAACAAGTCTGGAGAAATCTACGTGCAAAAGTATCCGAAGTTGAAGATGAGACT 1346 Query 1377 AGTGGACGGGAGCAGCATGGCAGCTACGGTGGTTATCAACAATATTCCAAAGGAAGCCAC 1436 ||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||| Sbjct 1347 AGTGGACGGGAGCAGCATGGCAGCTGCGGTGGTTATCAACAATATTCCAAAGGAAACCAC 1406 Query 1437 GGAAATTGTCTTTAGAGGAAATCTCACAAAGGTGGCTTCGGCTGTTGTCTTTGCTCTGTG 1496 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 1407 GGAAATTGTCTTTAGAGGAAATCTCACAAAGGTCGCTTCGGCTGTTGTCTTTGCTCTGTG 1466 Query 1497 CCAAAAGGGCGTCAAGGTGGTCGTGTTACGCGAGGAGGAACACAGCAAACTCATCAAATC 1556 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1467 CCAAAAGGGCGTCAAGGTGGTCGTGTTACGCGAGGAGGAACACAGCAAACTCATCAAATC 1526 Query 1557 TGGGGTTGACAAGAATCTGGTACTGTCTACAAGCAATAGTTATTACTCCCCAAAGGTGTG 1616 |||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 1527 TGGGGTTGGCAAGAATCTGGTACTGTCTACAAGCAATAGTTATTACTCCCCAACGGTGTG 1586 Query 1617 GTTGGTGGGGGATGGAATAGAGAACGAAGAGCAGATGAAAGCAAAAGAAGGAACCCTCTT 1676 ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct 1587 GTTGGTGGGGGATGGAATAGAGAACGAAGAGCAGATGAAGGCAAAAGAAGGAACCCTCTT 1646 Query 1677 TGTTCCCTTTTCTCACTTTCCGCCCAACAAACTCCGCAAGGACTGTTTCTACCAGTCCAC 1736 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 1647 TGTTCCCTTTTCTCACTTTCCGCCCAACAAACTCCGCAAGGACTGTTTCTACGAGTCCAC 1706 Query 1737 TCCAGCTATGCGTGTTCCCAAGTCTGCCCAAAACATCGACTCCTGTGAGAACTGGCTGGG 1796 ||||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||| Sbjct 1707 TCCAGCTATGCGTGTTCCCAACTCTGCCCAAATCATCGACTCATGTGAGAACTGGCTGGG 1766 Query 1797 GAGGAGGGTGATGAGTGCATGGAAAATAGGAGGTATAGTGCATGCACTTGAGGGTTGGGA 1856 |||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct 1767 AAGGAGGGTGATGAGTGCATGGAAAGTAGGAGGTATAGTGCATGCCCTTGAAGGTTGGGA 1826 Query 1857 GGAGCATGACTGCGGCAACACTTGCAACGTCCTCCGTCTCCACGCCATATGGGAAGCTGC 1916 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1827 GGAGCATGACTGCGGCAACACTTGCAACGTCCTCCGTCTCCACGCCATCTGGGAAGCTGC 1886 Query 1917 TCTTCGCCATGATTTCCAACCTCTCC--CACC----ATCTCCTCTATGAGCTTTTTTCAT 1970 |||||||||||||||||||||||||| | || ||||| ||||||||||||| ||| Sbjct 1887 TCTTCGCCATGATTTCCAACCTCTCCGTCTCCCGCCATCTCATCTATGAGCTTTT--CAT 1944 Query 1971 ATTCATACATCTATGTCCCCTTTCT-TGATTATATCTACTTCCCTTCCATCATTGTTTGC 2029 ||||||| ||||| ||||||| | || || | | | | || ||||| |||| Sbjct 1945 ATTCATA-ATCTAC-TCCCCTTCCAGTG-TT-TG-C--CGT---TT--ATCAT-GTTT-- 1989 Query 2030 TGTTTACTATGTTTTTCTATCGACAA-TATATAAG-TAC-CCTTGTTACCCTTGGTGCCA 2086 | | || || | | | ||| | || || || | ||| ||||||||| |||||||||| Sbjct 1990 T-TCTA-TA-GACTATATATATATAAGTAC-TA-GCTACACCTTGTTACGCTTGGTGCCA 2044 Query 2087 CGTGCTTCATATATGTTAGAAAGGGCaaaaaaaTTCGTCGTATGATATGCTTAGTTAAAT 2146 ||||||||||||||||||||||||||||| || |||||||| ||| |||||||||||||| Sbjct 2045 CGTGCTTCATATATGTTAGAAAGGGCAAACAATTTCGTCGTTTGAAATGCTTAGTTAAAT 2104 Query 2147 TTT-ATAAAACTCAATAAAAATCTTCAG 2173 ||| | |||||||||||||||||||||| Sbjct 2105 TTTGA-AAAACTCAATAAAAATCTTCAG 2131 > Ahg321478 jgi|Araly1|321478|fgenesh1_pm.C_scaffold_4001535 Length=1866 Score = 553 bits (299), Expect = 2e-156 Identities = 1278/1728 (74%), Gaps = 157/1728 (9%) Strand=Plus/Plus Query 216 ACTTATGATAGTCGTGTTGATGCTGTGGAGAATAGTTCACAGCCAGATATGGATCAGCGT 275 |||||||||||| | ||| | ||||| | || ||||| ||||| |||||||| || | Sbjct 129 ACTTATGATAGTGGCATTGGCGGTGTGGCGGATTGTTCATAGCCAAATATGGATAAGTTT 188 Query 276 GTCTCG---CCAGAGGACGGCTAAGGGAACGAA-CAAGATCGTGGACAAGCCCATTGAGT 331 || || ||| | || || || ||||| || | ||||||| ||||| |||| |||| Sbjct 189 CTCCCGTTACCA-A--ACCGCAAAAGGAACCAAGC-GGATCGTGAACAAGTCCATAGAGT 244 Query 332 TTGAGCAAGTGGACCGAGAGCGCACTTGGGACGACCAAG-TCATCTTCAACACTCTC-CT 389 |||| ||||| |||||||| | || |||||||| | || ||||||||||| ||||| | Sbjct 245 TTGATCAAGTTGACCGAGAACAAACCTGGGACGATC-AGATCATCTTCAACTCTCTCATT 303 Query 390 CATGTATC-T--CGCAAACAT-CAAGCTCCCAGGCG-CC--TCCCACCTTCCCCCATGGA 442 | | || | | | ||||| | | | || ||| | || | ||| |||| | ||| Sbjct 304 C-TTTA-CTTAAC-CAAAC-TGTACG-TCTTAGG-GACCAATACCA-TTTCCTTC-TGGC 355 Query 443 G-GCTAGACGGGGCCATCCTCA-TGGCTCTACTTCACGCTGGTCCCGTCGAGTTTC-TCT 499 | | || || || || | | ||||| || || |||||||| |||||| ||| ||| Sbjct 356 GAAC-CGATGGATTGAT-CTTAGTCGCTCTCCTCCATGCTGGTCCGGTCGAG-TTCATCT 412 Query 500 ACTACTGGTTTCACAGAGCTCTCCACCACCATTTCCTCTACTCTCGCTACCATTCTCACC 559 |||| ||||| ||| |||| || |||||||| |||||||||||||||||||||||||||| Sbjct 413 ACTATTGGTTCCACCGAGCACTTCACCACCACTTCCTCTACTCTCGCTACCATTCTCACC 472 Query 560 ACCACTCCTCCATTGTCACCGAGCCCATCACGTCTGTGGTGCACCCCTTCGCCGAGCACA 619 ||||||| ||||||||||||||||| ||||| || || || || || || || ||||||| Sbjct 473 ACCACTCTTCCATTGTCACCGAGCCAATCACTTCGGTAGTACATCCGTTTGCGGAGCACA 532 Query 620 TCGCCTACACACTACTCTTTGC-CATACCTATGGTAACGGCGTCCCTGTGTGGGATCC-T 677 | | || || || |||| | | ||||| | || | | | || || || | | | Sbjct 533 TTGGATATACGTTAATCTTGGGGC-TACCTCTAACAATGACTTTGCTATGCGGCA-CGGT 590 Query 678 CTC--CATCGTTTCCAT-CATGGGATACATT-A-CTTACATTGACTTCATGAACAACATG 732 ||| | | || ||||| | | ||| || | ||||||| || || |||||||| ||| Sbjct 591 CTCGGC-T-GTCTCCATTC-TC--ATATATGCAACTTACATAGATTTTATGAACAATATG 645 Query 733 GGACATTGCAACTTCGAGCTT-TTCCCTA-AGCGTCTCTTCCACC-TCTTCCCTCCCCTC 789 || || |||||||||||||| |||| | | | ||||||| || | || ||||| || Sbjct 646 GGTCACTGCAACTTCGAGCTCATTCCG-AGATC-TCTCTTCT-CCATTTTACCTCCTCTT 702 Query 790 AAGTTCCTCTGTTACACCCCCTCGTTTCACTCGCTCCACCACACGCAGTTCCGGACCAAC 849 |||||||| || ||||| |||||||||||||||||||||||||| || ||| |||| ||| Sbjct 703 AAGTTCCTTTGCTACACTCCCTCGTTTCACTCGCTCCACCACACACAATTCAGGACAAAC 762 Query 850 TACTCTCTGTTCATGCCAATATACGACTTCATCTACGGGACGACTGATAATTTG-ACCGA 908 |||||||| ||||||||||| ||||||| |||||| ||||| || || | | | | || Sbjct 763 TACTCTCTATTCATGCCAATGTACGACTACATCTATGGGACTACCGACGAGT-GCAGTGA 821 Query 909 CTCACTATACGAGAGGTCGTTGGAGATAGAGGAAGAATCACCC-GACGTC-ATCCACCTC 966 |||| | ||||| | |||||||||| ||| ||||| | | || |||| | || || || Sbjct 822 CTCATTGTACGAAACATCGTTGGAGAAAGAAGAAGA-TAAGCCTGACG-CGATTCATCTG 879 Query 967 ACTCACCTCACCA-CACACAACTCCATCTACCAAATGCGCCTTGGTTTCCCGTCCCTCTC 1025 || || || || | ||| |||| || ||||| | || || || || | |||||||| Sbjct 880 ACCCATCTAAC-ATCACTGGACTCTATTTACCATCTCCGGCTCGGCTTGGCTTCCCTCTC 938 Query 1026 CTCTTGC-CCCTTGTGGTCTCGACCCCCATGGTACCTCACATGCTTCATG-TG--GCCCT 1081 || | || ||| | |||| ||| || ||||| | | | ||||| || ||||| Sbjct 939 CT-T-GCACCC--GC--TCTCTTCCCAG-TGTTACCT-AT-T-CATCATGATGAAGCCCT 988 Query 1082 TCACTC-TC-C-TCTGCT-CATTTGCCCTCACTTCAGCTATCCCTTTGCGCA-CCTTTGT 1136 |||||| | | ||| || |||| | |||||||| | || |||| | || |||| || Sbjct 989 TCACTCATATCATCTCCTTCATT--C--TCACTTCA--T-TCTCTTTTC-CAACCTTCGT 1040 Query 1137 CTTTGAGCGAAACCGTCT-CCGTGACCTCAC-CGTTCACTCTCACCTCCTTCCCAAGTTT 1194 ||| ||| ||||||| || |||||| ||||| | ||||||| ||||| ||||||||||| Sbjct 1041 CTTCGAGAGAAACCG-CTTCCGTGATCTCACAC-TTCACTCCCACCTTCTTCCCAAGTTC 1098 Query 1195 TCCTTTCACTATAAATCACAGC-GCCACCATGAGTCCATCAACACTATCATAGAGGAAGC 1253 |||| ||| || | || |||| || | | || | ||||||| || ||||||| || Sbjct 1099 TCCTCTCATTACATGTCGCAGCAGC-AGAAAGAATGTATCAACAAAATGATAGAGGCGGC 1157 Query 1254 TATCCTTGAAGCAGATGAA-AAGGGTGTGAAAGTAATGAGTCTTGGC-CTGAT-GAACAA 1310 ||| |||||||| || ||| ||||||||||||||||||||| |||| || || |||| | Sbjct 1158 TATTCTTGAAGCGGA-GAAGAAGGGTGTGAAAGTAATGAGT-TTGGGGCT-ATTGAACCA 1214 Query 1311 TAGGGAG--GAACTAAACGGGTCTGGAGAAATGTACGTGCAA-AAGTATCCGAAGTTGAA 1367 ||||| ||| |||| |||| |||||||||||||||| | ||| |||| ||| | || Sbjct 1215 --GGGAGAAGAATTAAATGGGTATGGAGAAATGTACGTG-AGGAAGCATCCAAAGCTAAA 1271 Query 1368 GATAAG-ACTAGTGGACGGGAGCAG-CATGGCAGCT-ACGGTGGTTAT-CAACAATATTC 1423 |||||| | |||||||||| ||||| | || ||||| | |||||| | || | |||| Sbjct 1272 GATAAGGA-TAGTGGACGGAAGCAGTCTTG-CAGCTGA-GGTGGTGCTTCAT-AGCATTC 1327 Query 1424 CAAA-GGAAGCCA-CGGAAATTGTCTTTAGAGG--AAATCTCACAAAGGTGGCTTCG-GC 1478 | || | ||| || | || |||||||||| ||||| || |||| || || || || Sbjct 1328 CTGTTGGGA-CCAACG-AGGTTCTCTTTAGAGGCCAAATCACA-AAAGTTG-CT-CGTGC 1382 Query 1479 TGTTGTCTTTGCTCTGTGCCAAAAGGGCGTCAAGGTGGTCGTGTTACGCGAGGAGGAACA 1538 |||||||| |||| |||||||| | | |||||||| | || |||||| |||| || || Sbjct 1383 CATTGTCTTTTCTCTTTGCCAAAATGCCATCAAGGTGATGGTCTTACGCAAGGAAGAGCA 1442 Query 1539 CAGCAAACTCATCAAAT-CTGGG--G-T--T-GACAAG-AA--TCTGGTACTGTCTACAA 1588 || || | ||| || || | | | | ||| || |||||| || | |||| Sbjct 1443 TTCCATGTTCGCCGAATTCTTGGACGATAATTGT-AAGGAAAATCTGGTGCT--C-ACAA 1498 Query 1589 GCAATAGTTATTACTCCCCAAAGGTGTGGTTGGTGGGGGATGGAATAGAG-AACGAAGAG 1647 |||| | | || ||| || | | ||||||||||| ||||| || || || ||||| Sbjct 1499 CCAAT--T-ACTA-TCC--AATGATTTGGTTGGTGGGAGATGGGCTA-AGCAAAAAAGAG 1551 Query 1648 CAGATGAAAGCAAAAGAAGGAACCCTCTTTGTTCCCTTT-TCTCACTTTCCGCCCAACAA 1706 |||| || ||||||||| |||| |||||| |||| ||| ||||| ||||| || | ||| Sbjct 1552 CAGAAGATGGCAAAAGAAAGAACTCTCTTTCTTCC-TTTCTCTCAATTTCCTCCTACCAA 1610 Query 1707 ACTCCGCAAGGACTG-TTTCTACCAGT-CCACTCCAGCTATGCGTGTTCCCA-A-GTCTG 1762 ||| || || ||||| ||| ||||| | ||||||| |||||| | |||| | | ||| Sbjct 1611 ACTACGAAAAGACTGCTTT-TACCA-TACCACTCCGGCTATGA-TCATCCCGCACG-CTG 1666 Query 1763 CCCAAAACATCGACTCCTGTGAGAACTGGCTGGGGAGGAGGGTGATGAGTGCATGGAAAA 1822 |||| ||||| || || |||||||| |||||||||||||| |||||||| ||||||| | Sbjct 1667 CCCATAACATTGATTCTTGTGAGAATTGGCTGGGGAGGAGAGTGATGAGCGCATGGAGAG 1726 Query 1823 TAGGAGGTATAGTGCATGCACTTGA-GGGTTGGGAGGAGCATGACTGC 1869 | || || ||||| ||||| ||||| |||| ||||||| || || ||| Sbjct 1727 TTGGTGGGATAGTACATGCGCTTGAAGGGT-GGGAGGAACACGAGTGC 1773 > Ahg923354 jgi|Araly1|923354|scaffold_104635.1 Length=653 Score = 414 bits (224), Expect = 1e-114 Identities = 382/452 (85%), Gaps = 35/452 (8%) Strand=Plus/Plus Query 288 GACGGCTAAGGGAACGAACAAGATCGTGGACAAGCCCATTGAGTTTGAGCAAGTGGACCG 347 |||||| ||||||| ||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 173 GACGGCCAAGGGAAGGAAGAAGATCGTGGACAAGCCCATTGAGTTCGAGCAAGTGGACCG 232 Query 348 AGAGCGCACTTGGGACGACCAAGTCATCTTCAACACTCTCCTCATGTATCTCG-CAAACA 406 || | || |||||||||||||| ||||||||||||| ||| |||||| ||| | | |||| Sbjct 233 AG-G-GC-CTTGGGACGACCAAATCATCTTCAACACGCTCTTCATGTTTCTTGTC-AACA 288 Query 407 TCAAGCTCCCAGGC-GCCTCCCACCT-TCCC-C-CATGGAGGCTAGACGGGGCCATCCTC 462 ||| ||| ||||| | || || | | |||| | | ||||| |||||||| ||||| ||| Sbjct 289 ACAAACTCTCAGGCTG-CT-CC-CGTATCCCTCTC-TGGAGACTAGACGGAGCCATTCTC 344 Query 463 ATG-G-C-T--C--TACTTCACGCTGGTCCCGTCGAGTTTC-TCTACTACTGGTTTCACA 514 ||| | | | | ||||||| |||||||||||| || ||| | ||||| ||||| |||| Sbjct 345 ATGAGTCATGACTATACTTCATGCTGGTCCCGTCCAG-TTCTTATACTAGTGGTTCCACA 403 Query 515 GAGCTCTCCACCACCATTTCC---TCTACTCTCGCTACCATTCTCACCACCACTCCTCCA 571 ||||||||||||| || |||| |||||||||||||||||||||||||||||||||||| Sbjct 404 GAGCTCTCCACCAGCACTTCCTGATCTACTCTCGCTACCATTCTCACCACCACTCCTCCA 463 Query 572 TTGTCACCGAGCCCATCACG--T---C---TGTGGTGCACCCCTTCGCCGAGCACATCGC 623 | ||||||||||||||||| | | |||||||||||||||||||||||||||||| Sbjct 464 TCGTCACCGAGCCCATCACAACTTGGCAGCTGTGGTGCACCCCTTCGCCGAGCACATCGC 523 Query 624 CTACACACTACTCTTT-GCCATACCTATGGTAACGGCGTCCCTGTGTGGGATCCTCTCCA 682 |||| ||||||| ||| ||||||| ||| ||||||||||||||||||||||||||||||| Sbjct 524 CTACTCACTACT-TTTCGCCATACTTATAGTAACGGCGTCCCTGTGTGGGATCCTCTCCA 582 Query 683 TCGTTTCCATCATGGGATACATTACTTACATT 714 | ||| || || | | |||| ||||||||||| Sbjct 583 TTGTTACCTTCGTTGCATACGTTACTTACATT 614 Score = 195 bits (105), Expect = 2e-48 Identities = 150/172 (87%), Gaps = 2/172 (1%) Strand=Plus/Plus Query 57 CTAGCTCAAGTACCTTTGGATGGCGTCGAGGCCCGGAGCTCTTACGGAGTGGCCATGGAG 116 ||| ||||| ||||||||||||||||| ||| | |||| ||| ||||| ||||||||||| Sbjct 2 CTACCTCAAATACCTTTGGATGGCGTCAAGGTCGGGAGTTCTAACGGAATGGCCATGGAG 61 Query 117 TCCCCTTGGTAGCTTCAAGTACCTCTTGGTGGCCCCGTTGGTGATGGCGAGCATGCACTC 176 |||||||||| ||||||||||||||||||||||||||||| |||||| ||||| || || Sbjct 62 TCCCCTTGGTGGCTTCAAGTACCTCTTGGTGGCCCCGTTGAAGATGGCAAGCATACATTC 121 Query 177 GTACGTGACGGCTGTGGATGAGGAGAAAGACCTCAGC-AGACTTATGATAGT 227 ||||||||| |||| ||| |||||||| || || ||| ||||| |||||||| Sbjct 122 GTACGTGACAGCTGAGGAGGAGGAGAAGGAGCT-AGCGAGACTGATGATAGT 172 > Ahg923356 jgi|Araly1|923356|scaffold_104637.1 Length=373 Score = 117 bits (63), Expect = 4e-25 Identities = 78/85 (92%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 1228 TCCATCA-ACACTATCATAGAGGAAGCTATCCTTGAAGCAGATGAAAAGGGTGTGAAAGT 1286 |||| || ||| |||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 53 TCCACCACACAAAATCATAGAGGTAGCTATCCTTGAAGCAGATGAAAAGGGTGTGAGAGT 112 Query 1287 AATGAGTCTTGGCCTGATGAACAAT 1311 ||||||||||||||||||||| ||| Sbjct 113 AATGAGTCTTGGCCTGATGAATAAT 137 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 81779756015 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5