BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G02530.1 Length=3998 Score E Sequences producing significant alignments: (Bits) Value Ahg470213 jgi|Araly1|470213|fgenesh2_kg.1__167__AT1G02530.1 5725 0.0 Ahg490396 jgi|Araly1|490396|fgenesh2_kg.6__3530__AT4G01830.1 1334 0.0 Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1 87.9 5e-16 Ahg934330 jgi|Araly1|934330|scaffold_402318.1 56.5 1e-06 > Ahg470213 jgi|Araly1|470213|fgenesh2_kg.1__167__AT1G02530.1 Length=3938 Score = 5725 bits (3100), Expect = 0.0 Identities = 3623/3878 (93%), Gaps = 26/3878 (1%) Strand=Plus/Plus Query 1 AGATTTCTTA-AAATC-CTTCTGATTTGTGTCAGCGCCGGAAAATGAACCGTGACGGCGC 58 |||||||||| ||| | ||| |||||| |||||||||||||||||||||||||||||||| Sbjct 1 AGATTTCTTAGAAA-CTCTT-TGATTTCTGTCAGCGCCGGAAAATGAACCGTGACGGCGC 58 Query 59 CGGAGAAGGCGACTCTGTTTCACACGAA-CATTCAACATCTAAAACCGATGAAAAGGCCA 117 |||||||||||||||||||||||||||| || ||||||||||||| |||||||||||| | Sbjct 59 CGGAGAAGGCGACTCTGTTTCACACGAACCA-TCAACATCTAAAAACGATGAAAAGGCGA 117 Query 118 AGACAGTTCCTCTCTACAAGCTATTTGCGTTTGCAGATTCCTTCGATGTGTTTTTGATGA 177 ||||||||||| ||||||||||||||||||||||||||||||| |||||| | ||||||| Sbjct 118 AGACAGTTCCTTTCTACAAGCTATTTGCGTTTGCAGATTCCTTTGATGTGCTCTTGATGA 177 Query 178 TATGTGGCTCACTTGGAGCTATTGGGAATGGAGTGTGTTTACCTCTTATGACATTGTTGT 237 ||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 178 TATGTGGCTCAATCGGAGCTATTGGGAATGGTGTGTGTTTACCTCTTATGACATTGTTGT 237 Query 238 TTGGTGATCTCATCGATTCCTTTGGAAAAAATCAGAACAACAAAGACATTGTTGATGTTG 297 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct 238 TTGGTGATCTCATCGATTCCTTTGGGAAAAATCAGAACAATAAAGACATTGTTGATGTTG 297 Query 298 TCTCAAAGGTTTGTCTTAAATTCGTCTACCTTGGACTTGGAAGACTTGGAGCAGCCTTTC 357 |||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct 298 TCTCAAAGGTTTGTCTTAAATTTGTCTACCTTGGACTTGGAACACTTGGAGCAGCCTTTC 357 Query 358 TTCAGGTTGCTTGTTGGATGATTACTGGAGAGAGACAAGCCGCAAAGATAAGAAGTAAC- 416 ||||||| ||||||||||||||||| ||||||||||||||||| | |||||||||| || Sbjct 358 TTCAGGTGGCTTGTTGGATGATTACGGGAGAGAGACAAGCCGCGAGGATAAGAAGT-ACT 416 Query 417 TATCTGAAAACAATTCTGAGACAAGACATCGGATTCTTCGATGTT-GAAACAAACACAGG 475 ||||||||||||||||||||||||||||| |||||||||||| || ||||||||||| || Sbjct 417 TATCTGAAAACAATTCTGAGACAAGACATTGGATTCTTCGAT-TTGGAAACAAACACTGG 475 Query 476 AGAGGTTGTTGGTAGAATGTCTGGAGATACTGTTCATATTCAAGATGCCATGGGTGAGAA 535 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct 476 AGAGGTTGTTGGTAGAATGTCTGGAGATACTGTTCTTATTCAAGATGCCATGGGTGAAAA 535 Query 536 GGTGGGGAAGTTTATTCAGCTGGTATCTACTTTCGTTGGCGGATTTGCTTTAGCTTTTGC 595 ||| |||||||||||||||||||||||||||||||| |||||||||| ||||||||| Sbjct 536 GGTTGGGAAGTTTATTCAGCTGGTATCTACTTTCGTCGGCGGATTTGTTTTAGCTTTCAT 595 Query 596 TAAAGGATGGTTGCTAACATTGGTTATGTTAACTTCGATTCCTTTTCTGGCTATGGCTGG 655 |||||||||||| |||||||||||||||||||||||||| || |||||||||||||||| Sbjct 596 TAAAGGATGGTTACTAACATTGGTTATGTTAACTTCGATCCCGCTTCTGGCTATGGCTGG 655 Query 656 TGCAGCCATGGCGCTTTTAGTGACTCGAGCTTCTTCTCGGGGACAAGCCGCTTATGCAAA 715 ||||||||| ||| || |||| |||||||||||||||||||||||||||||||||||||| Sbjct 656 TGCAGCCATTGCGATTATAGTCACTCGAGCTTCTTCTCGGGGACAAGCCGCTTATGCAAA 715 Query 716 AGCAGCAACTGTTGTTGAACAGACAATCGGGTCTATCCGAACGGTTGCTTCTTTTACGGG 775 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 716 AGCAGCAACTGTTGTTGAACAGACTATCGGATCTATCCGAACGGTTGCTTCTTTTACGGG 775 Query 776 AGAGAAGCAAGCAATAAACAGCTACAAGAAGTACATAACATCGGCTTATAAATCAAGCAT 835 |||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| Sbjct 776 AGAGAAGCAAGCAATAAACAGCTACAAGAAGTTCATAACATCGGCGTATAAATCAAGCAT 835 Query 836 TCAACAAGGTTTCTCCACTGGTTTAGGACTTGGAGTAATGATCTAT-GTGTTCTTCAGCA 894 |||||||||||||||||| ||||||||||| ||||||||| ||| | ||||| ||||||| Sbjct 836 TCAACAAGGTTTCTCCACCGGTTTAGGACTAGGAGTAATGTTCT-TCGTGTTTTTCAGCA 894 Query 895 GCTATGCTTTGGCTATTTGGTTTGGTGGGAAGATGATACTCGAAAAAGGGTATACCGGTG 954 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 895 GCTATGCTTTGGCTATCTGGTTTGGTGGGAAGATGATACTCGAAAAAGGGTATACCGGTG 954 Query 955 GCTCTGTGATCAACGTGATCATCATTGTGGTTGCGGGTTCAATGTCGCTTGGGCAAACAT 1014 || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct 955 GCGCTGTGATCAACGTGATCATCATTGTGGTTGCGGGTTCAATGTCCCTTGGGCAAACAT 1014 Query 1015 CTCCATGTGTAACCGCATTTGCAGCAGGTCAAGCTGCAGCATATAAGATGTTTGAGACGA 1074 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||| Sbjct 1015 CTCCATGTGTAACCGCATTTTCAGCTGGTCAAGCTGCAGCATATAAGATGTTTCAGACGA 1074 Query 1075 TCAAAAGAAAGCCTTTGATTGATGCTTATGACGTAAATGGAAAGGTTCTTGGAGATATCC 1134 ||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1075 TCAAACGAAAGCCTTTGATTGATGCTTATGACGTTAATGGAAAGGTTCTTGAAGATATCC 1134 Query 1135 GAGGAGACATTGAACTGAAAGATGTGCATTTCAGTTACCCCGCGAGGCCAGACGAGGAGA 1194 |||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||| | Sbjct 1135 GAGGAGACATTGAACTTAAAGATGTGCATTTCAGTTACCCTGCGAGGCCAGACGAGGATA 1194 Query 1195 TATTTGATGGATTCTCTCTGTTTA-TCCCGAGCGGTGCAACAGCAGCACTGGTAGGAGAA 1253 |||| | |||||||||||||||| |||| |||||||||||||||||| | ||||||||| Sbjct 1195 TATTCAACGGATTCTCTCTGTTTATTCCC-AGCGGTGCAACAGCAGCATTAGTAGGAGAA 1253 Query 1254 AGTGGAAGTGGAAAATCTACGGTGATAAATTTGATTGAGAGGTTTTATGATCCGAAAGCC 1313 |||||||||||||||||||| ||||| | |||||||||||||||||||||||| ||| || Sbjct 1254 AGTGGAAGTGGAAAATCTACCGTGATCAGTTTGATTGAGAGGTTTTATGATCCAAAATCC 1313 Query 1314 GGTGAAGTACTCATTGATGGAATTAATCTTAAGGAGTTTCAGTTGAAATGGATCAGAAGC 1373 || | |||||| ||||||||| |||||||||||||||| ||||||||||||||||||||| Sbjct 1314 GGCGCAGTACTAATTGATGGAGTTAATCTTAAGGAGTTCCAGTTGAAATGGATCAGAAGC 1373 Query 1374 AAAATCGGATTGGTCTGCCAAGAACCTGTTCTGTTTTCGTCGAGCATCATGGAGAATATC 1433 ||||| ||||||||| | ||||| || ||||||||||||||||||||||||||||||||| Sbjct 1374 AAAATTGGATTGGTCAGTCAAGAGCCGGTTCTGTTTTCGTCGAGCATCATGGAGAATATC 1433 Query 1434 GCCTACGGGAAAGAAAATGCAACGCTTCAAGAGATTAAAG-TAGCAACAGAGCTAGCAAA 1492 |||||||||||||||||||| ||||||||||||||||||| | | |||||||||| | || Sbjct 1434 GCCTACGGGAAAGAAAATGCGACGCTTCAAGAGATTAAAGCT-GTAACAGAGCTAACTAA 1492 Query 1493 TGCAGCAAAGTTCATAAATAACTTACCTCAGGGGTTAGATACAAAGGTAGGAGAGCACGG 1552 ||| || ||||||||| ||||||||||||||||||| |||||| ||||||||||||||| Sbjct 1493 TGCGGCGAAGTTCATAGATAACTTACCTCAGGGGTTGGATACATTGGTAGGAGAGCACGG 1552 Query 1553 GACACAGCTCTCGGGAGGACAGAAACAGAGGATAGCTATTGCAAGAGCTATTCTTAAAGA 1612 |||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| Sbjct 1553 GACACAGCTCTCGGGAGGACAGAAACAGAGGATAGCGATTGCGAGAGCTATTCTTAAAGA 1612 Query 1613 TCCGCGGGTTTTGCTTCTGGATGAAGCAACAAGCGCGCTCGATACAGAATCCGAAAGAGT 1672 ||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1613 TCCGCGGATTTTGCTGCTGGATGAAGCAACAAGCGCGCTCGATGCAGAATCCGAAAGAGT 1672 Query 1673 GGTTCAAGAGGCTTTAGATAGAGTCATGGTTAACCGGACTACGGTGGTGGTTGCGCATAG 1732 ||||||||||||||||||||||| |||||||||||||||||| || | |||||||||| Sbjct 1673 TGTTCAAGAGGCTTTAGATAGAGTGATGGTTAACCGGACTACGCTGATTATTGCGCATAG 1732 Query 1733 ATTAAGCACGGTAAGAAATGCGGATATGATTGCAGTAATTCACAGCGGAAAAATGGTGGA 1792 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1733 GTTAAGCACGGTAAGAAATGCGGATATGATTGCAGTAATTCACCGCGGAAAAATGGTGGA 1792 Query 1793 AAAAGGTTCGCATTCTGAGTTGTTGAAAGATTCCGTGGGAGCTTATTCGCAGCTCATTCG 1852 ||||||||| |||||||||| |||||||||||| | |||||||||||||||||||||||| Sbjct 1793 AAAAGGTTCACATTCTGAGTAGTTGAAAGATTCTGAGGGAGCTTATTCGCAGCTCATTCG 1852 Query 1853 GTGT-CAAGAGATAAACAAGGGTCATGATGCAAAACCATCAGACATGGCTTCGGGATCAT 1911 || | |||||||||||||||||| | |||| |||||||||||| | || ||||||||| Sbjct 1853 GT-TACAAGAGATAAACAAGGGTAACGATGTGAAACCATCAGACGTATCTGCGGGATCAT 1911 Query 1912 CTTTCCGGAATTCGAATTTGAACATATCAAGAGAGGGATCGGTTATCAGTGGTGGAACCT 1971 |||||||||| |||| |||||| | ||||| ||||||||||||||||||||| ||||||| Sbjct 1912 CTTTCCGGAACTCGAGTTTGAAAAAATCAATAGAGGGATCGGTTATCAGTGGCGGAACCT 1971 Query 1972 CGTCTTTTGGAAATAGCAGTCGTCATCATTCTTTGAATGTCCTTGGTTTATTCGCTGGAC 2031 |||| ||||||||||||| |||||||||||||||||||| ||||||||||| || |||| Sbjct 1972 CGTCGGTTGGAAATAGCAGCCGTCATCATTCTTTGAATGTTCTTGGTTTATTTGCAGGAC 2031 Query 2032 TAGACCTTGGTAGCGGTAGCCAAAGAGTAGGCCAAGAGGAAACTGGAACGACGAGTCAAG 2091 ||||||| ||||||||||||||| ||||||| |||||||||||||||||| | ||||||| Sbjct 2032 TAGACCTCGGTAGCGGTAGCCAACGAGTAGGTCAAGAGGAAACTGGAACGGCAAGTCAAG 2091 Query 2092 AACCGCTCCGAAAAGTATCACTCACCCGAATCGCAGCTCTAAACAAACCTGAGATCCCGG 2151 ||||||||| ||||||||||||||||||||| || | ||||||||||||||||||||| | Sbjct 2092 AACCGCTCCCAAAAGTATCACTCACCCGAATTGCGGTTCTAAACAAACCTGAGATCCCTG 2151 Query 2152 TTCTCCTTCTT-GGAACTGTAGTAGCAGCAATCAATGGCGCGATTTTCCCGCTTTTCGGG 2210 |||||||| || |||||||||| ||||||||| |||||||| |||||||||||||||||| Sbjct 2152 TTCTCCTT-TTAGGAACTGTAGCAGCAGCAATTAATGGCGCAATTTTCCCGCTTTTCGGG 2210 Query 2211 ATTCTGATTTCAAGAGTCATCGAAGCGTTCTTCAAACCAGCTGACCAATTAAAGAAAGAT 2270 |||||||||||||||||||| ||||||||||||||||||| ||||||| |||||||||| Sbjct 2211 ATTCTGATTTCAAGAGTCATTGAAGCGTTCTTCAAACCAGTTGACCAACTAAAGAAAGAA 2270 Query 2271 TCAAGATTCTGGGCGATTATATTTGTAGCTCTGGGAGTAACTTCGTTGATTGTCTCACCG 2330 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2271 TCAAGATTCTGGGCTATTATATTTGTAGCTCTGGGAGTAACTTCGTTGATTGTCTCACCG 2330 Query 2331 TCTCAAATGTATCTGTTTGCAGTAGCTGGAGGAAAACTTATACGACGAATTCAGTCAATG 2390 |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 2331 TCTCAAATGTATCTGTTTGCAGTAGCTGGAGGAAAACTAATTCGACGAATTCAGTCAATG 2390 Query 2391 TGCTTTGAGAAAGCGGTTCACATGGAGGTTAGCTGGTTCGATGAGCCAGAGAACTCGAGT 2450 |||||||||||||||||||||||||| ||| | ||||||||||||||||||||||||||| Sbjct 2391 TGCTTTGAGAAAGCGGTTCACATGGAAGTTGGGTGGTTCGATGAGCCAGAGAACTCGAGT 2450 Query 2451 GGTACAATGGGGGCAAGGCTCTCGACTGATGCAGCTTTGATTAGAGCTCTAGTAGGAGAT 2510 |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2451 GGTACAATGGGGGCCAGGCTCTCGACTGATGCAGCTTTGATTAGAGCTCTAGTTGGAGAT 2510 Query 2511 GCATTGTCTTTAGCGGTTCAAAACGCTGCATCTGCTGCGTCTGGATTGATTATAGCGTTC 2570 ||||||||| |||| |||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2511 GCATTGTCTCTAGCTGTTCAAAATGCTGCATCTGCTGCGTCTGGATTGATTATAGCGTTC 2570 Query 2571 ACTGCGAGTTGGGAATTGGCGCTTATAATCTTAGTGATGCTTCCTCTTATTGGTATCAAT 2630 ||||||||||||||| ||||||||||||| ||| ||||| |||||||||||||||||||| Sbjct 2571 ACTGCGAGTTGGGAACTGGCGCTTATAATATTATTGATGATTCCTCTTATTGGTATCAAT 2630 Query 2631 GGCTTTCTTCAAGTCAAGTTTATGAAAGGATTCAGCGCCGACGCAAAGTCAAAGTATGAG 2690 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2631 GGCTTCCTTCAAGTCAAGTTTATGAAAGGATTCAGCGCCGACGCAAAGTCAAAGTATGAG 2690 Query 2691 GAGGCAAGTCAGGTAGCGAACGACGCGGTGGGGAGTATAAGAACAGTTGCATCTTTCTGC 2750 ||||| |||||||||||||| || ||||| || ||||||||||||||||| ||||||||| Sbjct 2691 GAGGCGAGTCAGGTAGCGAATGATGCGGTAGGTAGTATAAGAACAGTTGCTTCTTTCTGC 2750 Query 2751 GCGGAGGAGAAAGTGATGCAGATGTATAATAAGCAATGTGAAGGTCCGATAAAAGATGGA 2810 ||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||| Sbjct 2751 GCGGAGGAGAAAGTGATGCAGATGTATAAGAAGCAATGCGAAGGTCCGATAAAAGATGGA 2810 Query 2811 GTAAAGCAAGGTTTCATCAGCGGATTAGGGTTTGGATTCTCCTTCTTCATTCTGTTTTGT 2870 | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 2811 ATCAAGCAAGGTTTCATCAGCGGATTAGGGTTTGGATTCTCTTTCTTCATTCTGTTTTGT 2870 Query 2871 GTCTACGCGACAAGCTTCTACGCGGCAGCTAGATTGGTTGAAGATGGCAAAACTACTTTC 2930 ||||||||||||||||||||||||| ||||||||||||||||||||||| | ||||||| Sbjct 2871 TTCTACGCGACAAGCTTCTACGCGGCGGCTAGATTGGTTGAAGATGGCAAGATTACTTTC 2930 Query 2931 ATTGATGTTTTCCAGGTGTTTTTCGCGTTAACCATGGCAGCTATTGGAATTTCTCAGTCG 2990 | ||||||||||||| | ||||| |||||||| |||||||| ||||| ||||||||||| Sbjct 2931 AATGATGTTTTCCAGATATTTTTTGCGTTAACAATGGCAGCGATTGGGGTTTCTCAGTCG 2990 Query 2991 AGTACTTTCGCTCCAGATTCAAGCAAAGCCAAGGTC-GCAGCTGCTTCAATCTTCGCGAT 3049 |||||||| ||||||||||| |||||||| |||| | ||||||||||| ||||| || || Sbjct 2991 AGTACTTTTGCTCCAGATTCGAGCAAAGCTAAGG-CTGCAGCTGCTTCGATCTTTGCAAT 3049 Query 3050 CATCGATAGAAAATCAAAGATAGACTCGAGCGATGAGACAGGGACAGTGTTGGAGAACGT 3109 ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| Sbjct 3050 CATCGATAGAAAATCGAAGATAGACTCGAGCGATGAGTCAGGGACAGTGTTGGAGAACGT 3109 Query 3110 TAAGGGAGATATTGAGCTTCGTCACTTAAGCTTCACTTATCCAGCAAGACCAGGCATTCA 3169 |||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 3110 TAAGGGAGATATTGAGCTGCGTCACTTAAGCTTCACTTATCCAGCAAGACCAGACATTCA 3169 Query 3170 GATCTTTCGTGATCTTTGCTTAACCATTCGCGCAGGAAAGACGGTTGCTTTGGTCGGCGA 3229 ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || Sbjct 3170 GATCTTTCGTGATCTTTGCTTAACCATTCATGCAGGAAAGACGGTTGCTTTGGTAGGAGA 3229 Query 3230 AAGTGGGTCGGGGAAATCGACGGTGATCTCGCTGTTACAAAGATTTTACGATCCAGATTC 3289 ||| |||||||||||||| |||||||||||||| |||||||||||||||||||||||||| Sbjct 3230 AAGCGGGTCGGGGAAATCAACGGTGATCTCGCTCTTACAAAGATTTTACGATCCAGATTC 3289 Query 3290 CGGTCAGATAACTTTAGACGGAGTTGAGCTCAAGAAGCTGCAATTGAAATGGTTGAGACA 3349 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3290 CGGTCATATAACTTTAGACGGAGTTGAGCTCAAGAAGCTGCAATTGAAATGGTTGAGACA 3349 Query 3350 ACAAATGGGACTAGTGGGACAAGAACCTGTCTTGTTCAACGACACGATTCGAGCCAACAT 3409 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct 3350 ACAAATGGGACTAGTGGGACAAGAACCTGTCTTGTTCAACGACACGATTCGAGCCAATAT 3409 Query 3410 TGCTTATGGCAAAGGAAGTGAAGAGGCCGCAACCGAGTCTGAAATCATAGCCGCTGCAGA 3469 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 3410 TGCTTATGGCAAAGGAAGCGAAGAGGCCGCAACCGAGTCTGAAATCATAGCCGCTGCAGA 3469 Query 3470 ACTTGCCAATGCACACAAATTCATCTCTAGCATACAACAGGGTTACGACACAGTGGTGGG 3529 ||| |||||| |||||||||| ||||||||||||||| |||||||||| ||||| ||||| Sbjct 3470 ACTCGCCAATTCACACAAATTTATCTCTAGCATACAAGAGGGTTACGATACAGTCGTGGG 3529 Query 3530 AGAGAA-AGGGATTCAGTTATCAGGAGGACAGAAACAGCGGGTAGCTATAGCACGTGCCA 3588 ||| || |||||||||||| |||||||||||||||||||| |||||||||||||| |||| Sbjct 3530 AGA-AAGAGGGATTCAGTTGTCAGGAGGACAGAAACAGCGCGTAGCTATAGCACGCGCCA 3588 Query 3589 TCGTGAAAGAGCCGAAG-ATATTGCTTTTGGACGAAGCAACGAGTGCTCTTGATGCAGAA 3647 ||||||||||||||| | || |||||||||||||||||||| || ||||||||||| ||| Sbjct 3589 TCGTGAAAGAGCCGA-GTATTTTGCTTTTGGACGAAGCAACAAGCGCTCTTGATGCGGAA 3647 Query 3648 TCAGAGCGACTGGTTCAGGATGCGCTTGACCGAGTGATTGTAAACCGAACCACGGTTGTG 3707 ||||| ||| |||||||||||||||||||||||||||| || |||||||||||||| ||| Sbjct 3648 TCAGAACGAGTGGTTCAGGATGCGCTTGACCGAGTGATGGTGAACCGAACCACGGTAGTG 3707 Query 3708 GTGGCTCACCGGTTATCGACCATTAAAAACGCTGACGTCATTGCCATCGTTAAGAACGGT 3767 |||||||| |||||||||||||||||||||||||||||||||||| |||||||||| ||| Sbjct 3708 GTGGCTCATCGGTTATCGACCATTAAAAACGCTGACGTCATTGCCGTCGTTAAGAATGGT 3767 Query 3768 GTGATCGCTGAGAATGGGACTCACGAAACGTTGATCAAAATAGACGGTGGGGTTTATGCT 3827 |||||||||||||| |||||||||| || ||||||||||| ||||||||||||||||| Sbjct 3768 GTGATCGCTGAGAAAGGGACTCACGGGACTTTGATCAAAATCGACGGTGGGGTTTATGCC 3827 Query 3828 TCCCTTGTTCAGCTTCACATGACTGCTTCTAATTGATA 3865 || || |||||||| ||||||||||||||||||||||| Sbjct 3828 TCGCTAGTTCAGCTACACATGACTGCTTCTAATTGATA 3865 Score = 102 bits (55), Expect = 2e-20 Identities = 71/79 (90%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 3901 ATTTATGTTGTTGTATGCAAGTTTATGTAGCTGTCACTATTTATTTTCTTTCCCTTTCTC 3960 ||| || |||||||||||||||||||||||||||||||| ||||||| ||||| |||||| Sbjct 3859 ATTGATATTGTTGTATGCAAGTTTATGTAGCTGTCACTAGTTATTTTGTTTCCTTTTCTC 3918 Query 3961 TCTAAATTTATAGTTATAA 3979 || ||||| ||||||||| Sbjct 3919 TCCAAATTGGTAGTTATAA 3937 > Ahg490396 jgi|Araly1|490396|fgenesh2_kg.6__3530__AT4G01830.1 Length=3693 Score = 1334 bits (722), Expect = 0.0 Identities = 1450/1794 (81%), Gaps = 80/1794 (4%) Strand=Plus/Plus Query 117 AAGACAGTTCC-TCTCTACAAGCTATTTGCGTT-TGCAGATTCCT-TCGATGTGTTTTTG 173 ||||| || || | ||||||| | ||| | || | |||||| || ||||||||| ||| Sbjct 31 AAGACTGTACCGT-TCTACAAATTGTTTTCCTTCT-CAGATT-CTACCGATGTGTTGTTG 87 Query 174 ATGATATG-TGGCTC-ACTTGGAGCTATTGGGAATGGAGTGTGTT-TACCTCTT-ATGAC 229 ||||| || ||| || | | |||||||| | || || || |||| | || || ||||| Sbjct 88 ATGAT-TGTTGGTTCGA-TCGGAGCTATCGTAAACGGTGTTTGTTCT-CC-GTTAATGAC 143 Query 230 ATTGTTGTTTGGTGATCTCATCGATTCCTTTGGAAAAAATCAGAACAACAAAGACATTGT 289 ||| ||||||||||||||||| ||| | || || |||| || |||||| |||| ||||| Sbjct 144 ATTATTGTTTGGTGATCTCATTGATGCATTGGGTCAAAACCAAAACAACGAAGAGATTGT 203 Query 290 TGATG-TTGTCTCAAAGGTTTGTCTT-AAATTCGTCTACCTTGGACTTGGAAG-ACTTGG 346 ||| | | || || ||||||||| || ||||| ||||||||||||||| | || |||||| Sbjct 204 TGA-GATAGTTTCCAAGGTTTGT-TTGAAATTTGTCTACCTTGGACTT-GTAGCACTTGG 260 Query 347 AGCAGCCTTTCTTCAGGTTG-CTTGTTGGATGATTACT-GGAGAGAGACAAGCCGCAAAG 404 ||||||||||||||||| || ||||||||||||||||| ||| | |||||||| || ||| Sbjct 261 AGCAGCCTTTCTTCAGG-TGACTTGTTGGATGATTACTGGGA-AAAGACAAGCTGC-AAG 317 Query 405 -ATAAGAAGTAACTATCTGAAAACAATTCTGAGACAAGACATCGGATTCTTCGATGTTGA 463 ||||| ||| ||||| ||||| ||||| ||||||||||| |||||||||||||| || Sbjct 318 AATAAGGAGTTTGTATCTAAAAACGATTCTAAGACAAGACATTGGATTCTTCGATGTCGA 377 Query 464 AACAAACACAGGAGAGGTTGTTGGTAGAATGTCTGGAGATACTGTTCATATTCAAGATGC 523 || | ||| ||||| ||||||||| |||||||||| |||||||||| ||| | ||||| Sbjct 378 AATGAGCACCGGAGAAGTTGTTGGTCGAATGTCTGGTGATACTGTTCTTATACTTGATGC 437 Query 524 CATGGGTGAGAAGGTGGGGAAGTTTATTCAGCTGGTAT-CTACTTTCGTTGGCGGATTTG 582 |||||||||||||| ||||||||||| ||| || | | | || ||| |||| ||||||| Sbjct 438 TATGGGTGAGAAGGTTGGGAAGTTTATACAGTTGAT-TGCAACATTCTTTGGTGGATTTG 496 Query 583 CTTTAGCTTTTGCT-AAAGGATGGTTGCTAACA-TTGGTTATGTTAACTTCGATTCCTTT 640 || |||| |||| | ||||||||||| || ||| || |||||||| || || |||||| | Sbjct 497 CTATAGCGTTTG-TGAAAGGATGGTTACTTACACTT-GTTATGTTGACCTCAATTCCTCT 554 Query 641 TCTGGCTATGGCTGGTGCAGCCATGGCGCTTTTAGTGACTCGAGCTTCTTCTCGGGGACA 700 ||| |||||| |||||||||| || ||| || |||| || |||||| ||||| | ||| Sbjct 555 TCTAGCTATGTCTGGTGCAGCTATAGCGATTATAGTTTCTAAAGCTTCGTCTCGAGAACA 614 Query 701 AGCCGCTTATGCAAAAGCAGCAACTGTTGTTGAACAGACAATCGGGTCTATCCGAACGGT 760 ||| |||||||| |||||| |||||||||||||||| || | |||||||| ||||| || Sbjct 615 AGCTGCTTATGCGAAAGCATCAACTGTTGTTGAACAAACTTTGGGGTCTATTCGAACCGT 674 Query 761 TGCTTCTTTTACGGGAGAGAAGCAAGCAATAAACAGCTACA-AGAAGTACATAACA-TCG 818 ||||||||| ||||||||||||||||| || | ||||||| |||| | |||| | | | Sbjct 675 TGCTTCTTTCACGGGAGAGAAGCAAGCGATGAGTAGCTACAGAGAA-TTGATAA-ATTTG 732 Query 819 GCTTATAAATCAAGCAT-TCAA-CAAGG-TTTCTCCACTGGTTTAGGACTTGGAGTAATG 875 || |||||||| | || | || ||||| ||| | || |||||||| ||||||||| || Sbjct 733 GCCTATAAATC--GAATGTTAAGCAAGGTTTTGT-TACGGGTTTAGGTCTTGGAGTACTG 789 Query 876 ATCTAT-GTGTTCTTCAGCAGC-TATGCTTTGGCTATTTGGTTTGGTGG-GAAGATGATA 932 ||| | |||||||| | | | |||||||||| ||| ||||||||||| ||| |||||| Sbjct 790 TTCT-TGGTGTTCTTTTGTA-CTTATGCTTTGGGTATATGGTTTGGTGGTGAA-ATGATA 846 Query 933 CTCGA-AAAAGGGTATACCGGTGGCT-CTGTGATCAACGTGATCATCATTGTGGTTGCGG 990 ||| | |||||||||||| |||| | | |||||||| || || ||| ||| || || Sbjct 847 CTC-AGAAAAGGGTATACAAGTGG-TGCAGTGATCAATGTAATGGTCACTGTAGTCACGA 904 Query 991 GTTCAATGTCGCTT-GGGCAAACATCTCCATGTGTAACCGCATTTGCAGCAGGTCAAGCT 1049 |||| ||||| || |||||| || | || ||| | || |||||||| || ||||||||| Sbjct 905 GTTCGATGTC-TTTAGGGCAAGCAACGCCTTGTCTTACTGCATTTGCGGCTGGTCAAGCT 963 Query 1050 GCAGCATATAAGATGTTTGAGACGATCAAAAGAAAGCCTTTGATTGATGCTTATGACGTA 1109 ||||| |||||||||||||||||||||||||||||||||| ||||||| ||| |||| || Sbjct 964 GCAGCTTATAAGATGTTTGAGACGATCAAAAGAAAGCCTTCGATTGATACTTTTGACCTA 1023 Query 1110 AATGGAAAGGTTCTT-GGAGATATCCGAGGAG-ACATTGAACTGAAAGATGTGCATTTCA 1167 ||||| |||||| || | |||||| ||||| | | |||||||||| ||||||| ||| | Sbjct 1024 AATGGGAAGGTT-TTAGAAGATATTCGAGGCGTA-ATTGAACTGAGAGATGTGTGTTTTA 1081 Query 1168 GTTACCCCGCGAGGCC-AGACGAGGAGATATTTGATGGATTCTCTCTGTTTATCCCGAGC 1226 ||||||| || ||||| | | || ||||| |||| |||||||||||| | || ||||| Sbjct 1082 GTTACCCTGCCAGGCCTA-AAGAAGAGATTTTTGGCGGATTCTCTCTGCTGATTCCGAGT 1140 Query 1227 GGTGCAACAGCAGCACTGGTAGGAGAAAGTGGAAGTGGAAAATCTACGGTGATAAATTTG 1286 |||||||| | || ||||||||||||| || ||||| |||||||| ||||| | |||| Sbjct 1141 GGTGCAACCGTTGCTTTGGTAGGAGAAAGCGGGAGTGGGAAATCTACTGTGATCAGTTTG 1200 Query 1287 ATTGAGAGGTTTTATGATCCGAAAGCCGGTGAAGTACTCATTGATGGAATTAATCTT-AA 1345 ||||| ||||||||||||||||| |||| |||| || |||||||| ||||| ||| || Sbjct 1201 ATTGAAAGGTTTTATGATCCGAATTCCGGCCAAGTGCTTATTGATGGTATTAA-CTTAAA 1259 Query 1346 GGAGTTTCAGTTGAAATGGATCAGAAGCAAA-ATCGGATTGGTCTGCCAAGAACCTGTTC 1404 ||||||||||||||||||||| || | ||| || ||||||||| | ||||||||||||| Sbjct 1260 GGAGTTTCAGTTGAAATGGATTAG-GGGAAAGATTGGATTGGTCAGTCAAGAACCTGTTC 1318 Query 1405 TGTTTTCGTCGAGCATCATGGAGAATATC-GCCTACGGGAAAGAAAATGCAACGCTTCAA 1463 ||||||| || || || |||||||||||| | ||||||||||| | ||||||| || || Sbjct 1319 TGTTTTCTTCTAGTATAATGGAGAATATCAG-GTACGGGAAAGAGAGTGCAACGGTTGAA 1377 Query 1464 GAGATT-AAAGTAGCAACAGAGCTAGCAAATGCAGCAAAGTTCATAAATAACTTACCTCA 1522 |||||| ||| |||| || |||||||||| || || |||||||| ||||| || |||| Sbjct 1378 GAGATTCAAA-CAGCAGCAAAGCTAGCAAACGCGGCTAAGTTCATCAATAAGTTGCCTC- 1435 Query 1523 G-GGGTTAGATACAAAGGTAGGAGAGCACGGGACACAGCTCTCGGGAGGACAGAAACAGA 1581 | || ||||| || |||||| || || || || || ||||| ||||| |||||||||| Sbjct 1436 GAGGTTTAGAGACTTTGGTAGGGGAACATGGAACTCAACTCTCAGGAGGGCAGAAACAGA 1495 Query 1582 GGATAGCTATTGCAAGAGCTATTCTTAAAGATCCGCGGGTTTTGCT-TCTGGATGAAGCA 1640 |||| ||||| || || || || ||||||||||||||| | ||||| | | |||||||| Sbjct 1496 GGATTGCTATCGCGAGGGCGATCCTTAAAGATCCGCGGATCTTGCTGT-TAGATGAAGCT 1554 Query 1641 ACAAGCGCGCTCGATACAGAATCCGAAAGAGTGGTTCAAGAGGCTTTAGATAGAGTCATG 1700 || ||||| || ||| | ||||||||||||||||||||||||||||||||||| || ||| Sbjct 1555 ACTAGCGCTCTTGATGCGGAATCCGAAAGAGTGGTTCAAGAGGCTTTAGATAGGGTAATG 1614 Query 1701 GTTAACCGGACTACGGTGGTGGTTGCGCATAGATTAAGCACGGTAAGAAATGCGGATATG 1760 || ||||||||||| ||| | || |||||| | |||||||| || |||||||| |||| | Sbjct 1615 GTGAACCGGACTACTGTGATTGTCGCGCATCGGTTAAGCACAGTGAGAAATGCTGATACG 1674 Query 1761 ATTGCAGTAATTCACAGCGGAAAAATGGTGGAAAAAGGTTCGCATTCTGAGTTG-TTGAA 1819 ||||| || |||||| | ||||| || |||||| ||||||| ||||| ||||| || || Sbjct 1675 ATTGCTGTGATTCACCGTGGAAAGATAGTGGAAGAAGGTTCACATTCAGAGTTACTT-AA 1733 Query 1820 AGATTC-CGT-GGGAGCTTATTCGCAGCTCATTCGGTGT-CAAGAGATAAACAA 1870 || || || ||| |||||||| ||||| || | || | |||||||||||||| Sbjct 1734 -GAATCACGAAGGG-GCTTATTCACAGCTTATACAGT-TACAAGAGATAAACAA 1784 > Ahg473002 jgi|Araly1|473002|fgenesh2_kg.1__2956__AT1G28010.1 Length=3878 Score = 87.9 bits (47), Expect = 5e-16 Identities = 164/219 (75%), Gaps = 13/219 (6%) Strand=Plus/Plus Query 1525 GGTTA-GATACAAAGGTAGGAG-AGCACGGGACACAGCTCTCGGGAGGACAGAAACAGAG 1582 ||||| |||| |||| |||| || | || || |||||||||||||||||||||||||| Sbjct 1495 GGTTACAATACTCAGGTTGGAGAAGGA-GGAACTCAGCTCTCGGGAGGACAGAAACAGAG 1553 Query 1583 GATAGCTATTGCAAGAGCTATTCTTA-AAGATCCGCGGGTTTTGCTTCTGGATGAAGCAA 1641 ||| || ||||| |||| |||| | || |||| | | || ||| | |||||||||| Sbjct 1554 GATTGCAATTGCTCGAGCGGTTCTAAGAA-ATCCAAAGATATTACTTTTAGATGAAGCAA 1612 Query 1642 CAAGCGCGCTCGATACAGAATCCGA-AAGAGTGGTTCAAG-AGGCT-TTAGATAGA-GTC 1697 | ||||| || ||| | ||||| || |||| || |||| | | || || |||| | ||| Sbjct 1613 CGAGCGCTCTTGATGCCGAATCAGAGAAGATTG-TTCA-GCAAGCACTT-GATA-ATGTC 1668 Query 1698 ATGGTTAACCGGACTACGGTGGTGGTTGCGCATAGATTA 1736 |||| || | || || | || ||||| ||||||||| Sbjct 1669 ATGGAAAAAAGAACAACAATTGTCGTTGCACATAGATTA 1707 > Ahg934330 jgi|Araly1|934330|scaffold_402318.1 Length=4061 Score = 56.5 bits (30), Expect = 1e-06 Identities = 36/39 (92%), Gaps = 0/39 (0%) Strand=Plus/Plus Query 1557 CAGCTCTCGGGAGGACAGAAACAGAGGATAGCTATTGCA 1595 ||||||||||||||||||||||||||||| || || ||| Sbjct 3501 CAGCTCTCGGGAGGACAGAAACAGAGGATCGCAATCGCA 3539 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 151126622383 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5