BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G02730.1
Length=3854
Score E
Sequences producing significant alignments: (Bits) Value
Ahg918929 jgi|Araly1|918929|scaffold_100210.1 5867 0.0
Ahg340891 jgi|Araly1|340891|fgenesh1_pg.C_scaffold_3000654 403 4e-111
Ahg939586 jgi|Araly1|939586|scaffold_600130.1 398 2e-109
Ahg488554 jgi|Araly1|488554|fgenesh2_kg.6__1688__AT5G16910.1 344 3e-93
Ahg482247 jgi|Araly1|482247|fgenesh2_kg.4__1307__AT2G33100.1 291 4e-77
Ahg918927 jgi|Araly1|918927|scaffold_100208.1 158 4e-37
> Ahg918929 jgi|Araly1|918929|scaffold_100210.1
Length=3674
Score = 5867 bits (3177), Expect = 0.0
Identities = 3531/3698 (95%), Gaps = 39/3698 (1%)
Strand=Plus/Plus
Query 165 CTGCTAATTGTGAACCAAAG-ATGGTGAAATCAGCAGCTTCTCAGTCACCATCTCCGGTG 223
|||||||||||||||| || ||||||||||||||||||| | || | |||||||||
Sbjct 1 CTGCTAATTGTGAACC-GAGAATGGTGAAATCAGCAGCTTGT---TCTTCTTCTCCGGTG 56
Query 224 ACTATAACGGTGACACCATGTAAAGGATCCGGCGACAGAAGCTTAGGATTGACGAGTCCT 283
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 57 ACTATAACGGTGACACCATGTAAAGGATCCGGCGACAGAAGCTTAGGATTGACGAGTCCT 116
Query 284 ATCCCACGCGCCTCCGTCATC-AC--CAACCAAAACTCTCCTCTAAGCTCAAGAGCCACG 340
|||||||||||||| || ||| || |||||||||||||||||||||||||||||||||
Sbjct 117 ATCCCACGCGCCTCTGTTATCAACAATAACCAAAACTCTCCTCTAAGCTCAAGAGCCACG 176
Query 341 CGTCGCACTTCCATTAGCAGCGGGAATCGGAGATCTAACGGTGATGAAGGAAGATACTGT 400
||||| |||||||||||| |||| ||||||||||||| |||| ||||||||||||||||
Sbjct 177 CGTCGTACTTCCATTAGCGGCGGAAATCGGAGATCTAGTGGTGGTGAAGGAAGATACTGT 236
Query 401 TCTATGTCTGTGGAAGATCTAACGGCGGAGACGACTAATTCAGAGTGCGTTCTGAGCTAT 460
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 237 TCTATGTCTGTGGAAGATCTAACGGCGGAGACGACTAATTCCGAGTGCGTTTTGAGCTAT 296
Query 461 ACTGTTCATATCCCACCTACGCCGGATCATCAGACGGTGTTCGCTTCACA-G-GA---G- 514
||||||||||| |||||||||||||||||||| ||||||||||||||||| | || |
Sbjct 297 ACTGTTCATATTCCACCTACGCCGGATCATCAAACGGTGTTCGCTTCACAGGAGAGTGGT 356
Query 515 A---GTGAAGAAGACGAGATGCTAAAAGGGAATTCGAATCAA-AAAAGTTTCCTCTCTGG 570
| |||||||||| |||||||||||||||||||| ||| || |||||||||||||||||
Sbjct 357 ATGGGTGAAGAAGATGAGATGCTAAAAGGGAATTCAAAT-AACAAAAGTTTCCTCTCTGG 415
Query 571 GACGATTTTCACCGGTGGGTTTAAATCGGTGACACGTGGTCATGTGATCGATTGTTCTAT 630
||||||||||||||||||||||||||||||||| ||||||||||| || ||||| |||||
Sbjct 416 GACGATTTTCACCGGTGGGTTTAAATCGGTGACTCGTGGTCATGTTATTGATTGCTCTAT 475
Query 631 GGATAGAGCTGATCCGGAGAAGAAGTCAGGTCAGATCTGCTGGTTAAAAGGTTGTGATGA 690
|||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||
Sbjct 476 GGATAGAGCTGATCCGGAGAAGAAATCAGGTCAGATCTGTTGGTTAAAAGGTTGTGATGA 535
Query 691 GAAAGTTGTTCACGGGAGATGTGAGTGTGGTTTCCGAATCTGTAGAGATTGTTACTTTGA 750
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 536 GAAAGTTGTTCATGGGAGATGTGAGTGTGGTTTCAAAATCTGTAGAGATTGTTACTTTGA 595
Query 751 TTGTATCACAAGTGGTGGAGGCAATTGTCCTGGTTGCAAAGAGCCTTATAGGGATATCAA 810
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct 596 TTGTATCACAAGTGGTGGAGGCAATTGTCCTGGTTGCAAAGAGCCTTACAGGGATGTCAA 655
Query 811 CGATGATCCAGAGACTGAGGAAGAAGACGAAGAAGATGAGGCGAAACCACTTCCTCAGAT 870
|||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 656 CGATGATCCAGAAACCGAGGAAGAAGACGAAGAAGATGAGGCGAAACCGCTTCCTCAGAT 715
Query 871 GGGTGAATCAAAGCTTGACAAGAGGCTTTCGGTTGTGAAGTCGTTTAAAGCGCAGAATCA 930
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 GGGTGAATCAAAGCTTGACAAGAGGCTTTCGGTTGTGAAGTCGTTTAAAGCGCAGAATCA 775
Query 931 AGCTGGAGATTTTGATCATACTCGGTGGTTGTTTGAGACTAAAGGTACTTATGGGTATGG 990
|||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 776 AGCTGGTGACTTTGATCACACTCGGTGGTTGTTTGAGACTAAAGGTACTTATGGGTATGG 835
Query 991 GAACGCTGTTTGGCCTAAAGATGGGTATGGAATCGGGTCGGGTGGTGGTGGAAACGGGTA 1050
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 836 GAACGCTGTTTGGCCTAAAGATGGGTATGGAATCGGGTCGGGTGGTGGTGGTAACGGGTA 895
Query 1051 TGAAACGCCACCTGAGTTTGGGGAGAGAAGCAAGAGGCCTCTTACTAGGAAAGTCAGTGT 1110
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 896 TGAAACGCCACCGGAGTTTGGGGAGAGAAGCAAGAGACCTCTTACTAGGAAAGTCAGTGT 955
Query 1111 CTCTGCTGCAATTATCAGTCCTTACAGATTACTCATTGCACTGCGTCTGGTGGCTCTTGG 1170
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 956 ATCTGCTGCAATTATCAGTCCTTACAGATTACTCATTGCACTGCGTCTGGTGGCTCTTGG 1015
Query 1171 TTTGTTCCTGACATGGAGGGTTCGCCACCCAAACCGAGAAGCAATGTGGTTGTGGGGAAT 1230
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1016 TCTGTTCCTGACATGGAGGGTTCGCCACCCAAACCGAGAAGCAATGTGGTTGTGGGGAAT 1075
Query 1231 GTCAACGACCTGTGAGCTTTGGTTTGCCTTGTCTTGGCTTTTGGATCAGCTTCCAAAACT 1290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 GTCAACGACCTGTGAGCTTTGGTTTGCCTTGTCTTGGCTTTTGGATCAGCTTCCAAAACT 1135
Query 1291 CTGTCCGGTTAACAGATTAACTGATTTAGGTGTTCTTAAAGAACGCTTTGAGTCTCCAAA 1350
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1136 CTGTCCGGTTAACAGATTAACTGATTTAGGTGTTCTTAAAGAACGCTTTGAATCTCCTAA 1195
Query 1351 CCTCAGGAACCCCAAAGGAAGATCTGATCTTCCGGGTATCGATGTGTTTGTCTCAACTGC 1410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1196 CCTCAGGAACCCCAAAGGAAGATCTGATCTTCCGGGTATCGATGTGTTTGTCTCAACCGC 1255
Query 1411 AGACCCTGAGAAAGAACCACCTCTGGTCACAGCCAACACCATTCTCTCGATCCTTGCTGT 1470
|||||||||||||||||| |||||||||||||||||||||||||| |||||||| |||||
Sbjct 1256 AGACCCTGAGAAAGAACCGCCTCTGGTCACAGCCAACACCATTCTTTCGATCCTAGCTGT 1315
Query 1471 TGATTACCCTGTGGAGAAACTTGCTTGCTACTTGTCAGACGATGGAGGAGCTTTGCTAAC 1530
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1316 TGATTACCCTGTGGAGAAACTTGCTTGCTACTTATCAGACGATGGAGGAGCTTTGCTAAC 1375
Query 1531 ATTTGAAGCCTTGGCTCAAACAGCTAGCTTTGCAAGTACATGGGTGCCATTTTGCAGGAA 1590
||| || |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1376 ATTCGAGGCCTTGGCTCAAACAGCTAGCTTTGCAAGTACATGGGTGCCATTCTGCAGGAA 1435
Query 1591 ACACAATATAGAGCCAAGGAACCCTGAGGCCTACTTTGGACAGAAGCGTAACTTTCTCAA 1650
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 1436 ACACAATATAGAGCCAAGGAACCCTGAGGCCTACTTTGGACAGAAGCGTAACATTCTCAA 1495
Query 1651 GAACAAAGTCAGGCTGGATTTTGTGAGGGAAAGGAGGAGAGTGAAGAGAGAATATGATGA 1710
||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1496 GAACAAAGTGAGGCTGGATTTTGTGAGGGAAAGGAGGAGAGTCAAGAGAGAGTATGATGA 1555
Query 1711 GTTTAAGGTCAGAATCAACTCATTGCCTGAAGCGATAAGGAGAAGGTCTGATGCTTATAA 1770
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1556 GTTTAAGGTCAGAATCAACTCATTGCCTGAGGCGATAAGGAGAAGGTCTGATGCTTATAA 1615
Query 1771 CGTGCACGAAGAGCTAAGGGCTAAGAAGAAACAGATGGAAATGATGATGGGAAACAATCC 1830
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1616 CGTGCACGAAGAGCTAAGGGCTAAGAAGAAACAGATGGAAATGATGATGGGAAACAATCC 1675
Query 1831 ACAAGAAACTGTTATAGTTCCAAAGGCCACTTGGATGTCAGATGGTTCTCACTGGCCAGG 1890
||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1676 TCAAGAAACTGTTAAAGTTCCAAAGGCAACTTGGATGTCAGATGGTTCTCACTGGCCAGG 1735
Query 1891 GACTTGGTCCTCTGGAGAAACCGATAACTCTCGAGGAGATCATGCTGGAATCATTCAGGC 1950
||||||||||||||||||| ||||||| || || ||||||||||||||||||||||||||
Sbjct 1736 GACTTGGTCCTCTGGAGAATCCGATAATTCCCGTGGAGATCATGCTGGAATCATTCAGGC 1795
Query 1951 AATGTTGGCTCCTCCAAATGCAGAACCAGTTTATGGAGCTGAAGCAGATGCTGAGAACTT 2010
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1796 AATGTTGGCTCCTCCAAATGCAGAACCAGTTTATGGAGCAGAAGCAGATGCTGAGAACTT 1855
Query 2011 AATTGATACAACAGACGTTGACATCAGGCTACCAATGCTGGTCTATGTGTCGAGAGAGAA 2070
||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct 1856 AATTGATACAACAGACGTTGACATCAGGCTACCAATGCTAGTTTATGTGTCCAGAGAGAA 1915
Query 2071 GCGTCCGGGTTATGACCACAACAAGAAAGCAGGAGCCATGAATGCTTTGGTTAGAACCAG 2130
||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1916 GCGGCCGGGTTATGATCACAACAAGAAAGCAGGAGCCATGAATGCTTTGGTTAGAACCAG 1975
Query 2131 CGCAATTATGTCTAATGGCCCATTCATCCTCAATCTTGATTGTGACCACTACATCTACAA 2190
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1976 CGCAATAATGTCTAATGGCCCATTCATCCTCAATCTTGATTGTGACCACTACATCTACAA 2035
Query 2191 CTCTATGGCTTTGAGAGAAGGAATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTG 2250
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2036 CTCCATGGCTTTGAGAGAAGGAATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTG 2095
Query 2251 CTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCA 2310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2096 CTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCA 2155
Query 2311 CAACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGACTTCAAGGTCCAATGTA 2370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2156 CAACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGACTTCAAGGTCCAATGTA 2215
Query 2371 TGTGGGAACTGGCTGCATCTTTCGGAGAACAGCTCTTTATGGATTTAGCCCGCCAAGAGC 2430
||||||||||||||| ||||| || ||||||||||| || || ||||| ||||| |||||
Sbjct 2216 TGTGGGAACTGGCTGTATCTTCCGAAGAACAGCTCTCTACGGGTTTAGTCCGCCGAGAGC 2275
Query 2431 AACTGAACATCATGGCTGGCTTGGAAGAAGAAAAGTCAAGATATCGCTGAGGAGACCAAA 2490
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2276 AACTGAACATCATGGCTGGCTTGGAAGAAGAAAGGTCAAGATATCGCTGAGGAGACCAAA 2335
Query 2491 AGCCATGATGAAGAAAGACGATGAAGTTTCTTTGCCTATAAATGGAGAATACAACGAAGA 2550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2336 AGCCATGATGAAGAAAGACGATGAAGTTTCTTTGCCTATAAATGGAGAATACAACGAAGA 2395
Query 2551 AGAGAATGATGATGGAGATATTGAATCTCTGCTTCTCCCAAAGAGATTTGGTAACTCAAA 2610
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2396 AGAGAATGACGATGGAGATATTGAATCTCTGCTTCTCCCAAAGAGATTTGGTAACTCAAA 2455
Query 2611 CTCTTTCGTTGCTTCAATCCCAGTTGCTGAATACCAAGGGAGACTCATACAAGACTTGCA 2670
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct 2456 CTCTTTCGTTGCTTCAATCCCGGTTGCTGAATACCAAGGGAGACTCTTACAAGACTTGCA 2515
Query 2671 AGGCAAAGGCAAGAACAGTAGACCAGCTGGCTCACTTGCTGTCCCACGTGAACCACTTGA 2730
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 2516 AGGCAAAGGCAAGAACAGTAGGCCAGCTGGCTCACTTGCTGTCCCACGTGAACCACTTGA 2575
Query 2731 TGCAGCCACTGTAGCTGAAGCAATCAGTGTGATATCTTGCTTCTATGAGGACAAAACTGA 2790
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2576 TGCAGCCACTGTAGCCGAAGCAATCAGTGTGATATCTTGCTTCTATGAGGACAAAACTGA 2635
Query 2791 ATGGGGTAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATA 2850
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2636 GTGGGGTAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATA 2695
Query 2851 TCGAATGCACAACAGAGGATGGAGATCAATCTACTGCGTGACAAAAAGAGACGCTTTCCG 2910
||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||
Sbjct 2696 TCGAATGCACAACAGAGGATGGAGATCAATCTATTGCGTGACAAAGCGGGACGCTTTCCG 2755
Query 2911 TGGAACAGCTCCGATCAATCTAACGGATAGACTTCACCAGGTTCTGAGATGGGCAACAGG 2970
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2756 TGGAACAGCTCCAATCAATCTAACGGATAGGCTTCACCAGGTTCTGAGATGGGCAACAGG 2815
Query 2971 ATCTGTTGAGATCTTCTTCTCAAGGAACAATGCAATTTTTGCAACCAGAAGGATGAAGTT 3030
||||||||||||||| ||||| ||||||||||| || || ||||||||||||||||||||
Sbjct 2816 ATCTGTTGAGATCTTTTTCTCTAGGAACAATGCGATCTTCGCAACCAGAAGGATGAAGTT 2875
Query 3031 TTTGCAGAGAGTGGCTTACTTCAACGTTGGAATGTATCCATTCACATCGCTATTCCTCAT 3090
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct 2876 TTTGCAGAGAGTGGCTTACTTCAATGTTGGAATGTATCCATTCACATCGCTTTTCCTCAT 2935
Query 3091 CGTCTACTGCATTCTCCCTGCGATTTCGCTCTTCTCGGGTCAATTCATAGTCCAATCACT 3150
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 2936 CGTCTACTGCATTCTCCCTGCGGTTTCGCTCTTCTCGGGTCAATTCATAGTCCAATCACT 2995
Query 3151 CGAC-ATAACGTTCTTGATCTATCTCCTCTCGATAACACTCACGCTCTGTATGCTATCAC 3209
|| |||||||||||||||||||||||||||||||||||||| ||||||||| ||||||
Sbjct 2996 -GAATATAACGTTCTTGATCTATCTCCTCTCGATAACACTCACACTCTGTATGTTATCAC 3054
Query 3210 TCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAACGAGCAGTTCT 3269
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 3055 TCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAATGAGCAGTTCT 3114
Query 3270 GGGTCATAGGAGGTACAAGCGCACACCCTGCAGCTGTTCTTCAGGGTCTTCTTAAGGTAA 3329
|||| || ||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct 3115 GGGTAATTGGAGGTACAAGCGCACACCCTGCAGCTGTTCTTCAAGGTCTTCTCAAGGTAA 3174
Query 3330 TTGCAGGAGTTGATATCTCATTTACCTTGACTTCCAAGTCATCTGCACCAGAAGATGGAG 3389
|||||||||| |||||||| |||||||||||||||||||||||| |||||||||| ||||
Sbjct 3175 TTGCAGGAGTCGATATCTCGTTTACCTTGACTTCCAAGTCATCTACACCAGAAGAAGGAG 3234
Query 3390 ACGATGAGTTTGCGGATCTGTATGTTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTAA 3449
| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 3235 AGGATGAGTTTGCTGATCTGTATGCTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTGA 3294
Query 3450 CTATCATGATGGTGAATATGATTGCAATTGCGGTGGGGCTAGCGAGGACTCTGTACAGTC 3509
| ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||
Sbjct 3295 CGATCATGATGGTGAATATGATTGCGATTGCGGTGGGGCTTGCGAGGACTCTGTACAGTC 3354
Query 3510 CGTTTCCACAGTGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTGCTTTGTC 3569
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3355 CGTTTCCGCAATGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTGCTTTGTC 3414
Query 3570 ATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGGCAGAGTTCCGACCATAGTGT 3629
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 3415 ATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGGCAGAGTTCCGACGATAGTGT 3474
Query 3630 TTGTGTGGTCAGGTTTGTTGTCGATTATTGTGTCGTTGCTTTGGGTTTATATTAACCCTC 3689
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3475 TTGTGTGGTCAGGTTTGTTGTCGATTATTGTGTCTTTGCTTTGGGTTTATATTAACCCTC 3534
Query 3690 CTTCAGGGAAACAGGACTATATGCAGTTTCAATTCCCTTGATTCTTAAGAGttttttttC 3749
||||||||||||| ||||||||||||||||| ||||||||||| || ||| |||
Sbjct 3535 CTTCAGGGAAACAAGACTATATGCAGTTTCAGTTCCCTTGATT-TTC----TTTGTTT-- 3587
Query 3750 TTTCGTGGTACAAGGCATGAAAGTTCTTCTTTCTAGGCTTCAGCCTTCATGTTTGTAATC 3809
|||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 3588 ----GTGGTACAAGGCATGAAAGTTCTTCTTTCTAGGCTTCA---T----GTTTGTAATC 3636
Query 3810 AGATATTATAATTACGATTTTTCAAAGTAAAGTCTCAA 3847
||||||||||||||||||||||||||||||||||||||
Sbjct 3637 AGATATTATAATTACGATTTTTCAAAGTAAAGTCTCAA 3674
> Ahg340891 jgi|Araly1|340891|fgenesh1_pg.C_scaffold_3000654
Length=939
Score = 403 bits (218), Expect = 4e-111
Identities = 277/302 (92%), Gaps = 17/302 (6%)
Strand=Plus/Plus
Query 2536 AGAATACAACGAAGAAGAGAATGATGATGGAGATATTGAATCTCTGCTTCTCCCAAAGAG 2595
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 251 AGAATACAACGAAGAAGAGAATGATGATGGAGATATTGAATCTCTACTTCTCCCAAAGAG 310
Query 2596 ATTTGGTAACTCAAACTCTTTCGTTGCTTCAATCCCAGTTGCTGAATACCAAGGGAGACT 2655
||||||||| |||| | | ||| | | |||||||||||||||||||||||
Sbjct 311 ATTTGGTAA--CAAA------C--T-CTT---T--C-GTTGCTGAATACCAAGGGAGACT 353
Query 2656 CATACAAGACTTGCAAGGCAAAGGCAAGAACAGTAGACCAGCTGGCTCACTTGCTGTCCC 2715
| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 354 CTTACAAGACTTGCAAGGCAAAGGCAAGAACAGTAGAACAGCTGGCTCACTTGCTGTCCC 413
Query 2716 ACGTGAACCACTTGATGCAGCCACTGTAGCTGAAGCAATCAGTGTGATATCTTGCTTCTA 2775
||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 414 ACGTGAACCGCTTGATGCAACCACTGTAGCTGAAGCAATCAGTGTGATATCTTGCTTCTA 473
Query 2776 TGAGGACAAAACTGAATGGGGTAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGA 2835
||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 474 CGAGGATAAAACTGAATGGGGCAAAAGAGTTGGATGGATCTATGGATCAGTGACTGAAGA 533
Query 2836 TG 2837
||
Sbjct 534 TG 535
Score = 381 bits (206), Expect = 2e-104
Identities = 236/251 (94%), Gaps = 0/251 (0%)
Strand=Plus/Plus
Query 2213 ATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTGCTATGTTCAGTTCCCTCAGAGG 2272
|||| | || ||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 1 ATGTTCGTCTTGCTTGATCGTGGAGTTGATAGAATCTGCTATGTTCAGTTCCCTCAGAGG 60
Query 2273 TTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCACAACACTGTCTTCTTTGATGTT 2332
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 TTTGAAGTTATTGACCCAAATGATCGTTATGCAAACCACAACACTGTCTTCTTTGATGTT 120
Query 2333 AGTATGAGAGCTTTGGATGGACTTCAAGGTCCAATGTATGTGGGAACTGGCTGCATCTTT 2392
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 121 AGTATGAGAGCTTTGGATGCACTTCAAGGTCCAATGTATGTGGGAACTGGCTGTATCTTC 180
Query 2393 CGGAGAACAGCTCTTTATGGATTTAGCCCGCCAAGAGCAACTGAACATCATGGCTGGCTT 2452
|| ||||||||||| || || ||||||||||| |||||||||||||||||||||||||||
Sbjct 181 CGAAGAACAGCTCTCTACGGGTTTAGCCCGCCGAGAGCAACTGAACATCATGGCTGGCTT 240
Query 2453 GGAAGAAGAAA 2463
|||||||||||
Sbjct 241 GGAAGAAGAAA 251
> Ahg939586 jgi|Araly1|939586|scaffold_600130.1
Length=820
Score = 398 bits (215), Expect = 2e-109
Identities = 247/263 (94%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 2235 GTGGCGATAGAATCTGCTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATTGACCCAAATG 2294
|||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 70 GTGGTGATAGAATCTGCTATGTTCAGTTCCCTCAGAGGTTTGGAGTTATTGACCCAAATG 129
Query 2295 ATCGTTATGCAAACCACAACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGAC 2354
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 130 ATCGTTATGCAAACCACCACACTGTCTTCTTTGATGTTAGTATGAGAGCTTTGGATGGAA 189
Query 2355 TTCAAGGTCCAATGTATGTGGGAACTGGCTGCATCTTTCGGAGAACAGCTCTTTATGGAT 2414
||||||||||||||||||||||||||||||| ||||| || ||||||||||| || || |
Sbjct 190 TTCAAGGTCCAATGTATGTGGGAACTGGCTGTATCTTCCGAAGAACAGCTCTCTACGGGT 249
Query 2415 TTAGCCCGCCAAGAGCAACTGAACATCATGGCTGGCTTGGAAGAAGAAAAGTCAAGATAT 2474
|||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 250 TTAGCCCGCCGAGAGCAACTGAACATCATGGCTGGCTTGGAAGAAGAAAGGTCAAGATAT 309
Query 2475 CGCTGAGGAGACCAAAAGCCATG 2497
||||||||| ||| || ||||||
Sbjct 310 CGCTGAGGAAACCGAAGGCCATG 332
Score = 320 bits (173), Expect = 5e-86
Identities = 210/228 (92%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 3336 GAGTTGATATCTCATTTACCTTGACTTCCAAGTCATCTGCACCAGAAGATGGAGACGATG 3395
|||| |||||||| |||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct 340 GAGTCGATATCTCGTTTACCTTGACTTCCAAGTCATCTACACCAGAAGAAGGAGAGGATG 399
Query 3396 AGTTTGCGGATCTGTATGTTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTAACTATCA 3455
||||||| |||||||||| ||||||||||||||||||||||||||||||||| | ||||
Sbjct 400 AGTTTGCTGATCTGTATGCTGTGAAATGGAGCTTTTTGATGGTTCCTCCATTGTCGATCA 459
Query 3456 TGATGGTGAATATGATTGCAATTGCGGTGGGG-CTAGCGAGGACTCTGTACAGTCCGTTT 3514
||||||||||||| ||||| |||||||||||| || |||| ||||||||||||||| |||
Sbjct 460 TGATGGTGAATATAATTGCGATTGCGGTGGGGCCT-GCGACGACTCTGTACAGTCCATTT 518
Query 3515 CCACAGTGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTG 3562
|| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 CCGCAATGGAGTAAGCTTGTTGGAGGAGTGTTCTTCAGCTTTTGGGTG 566
> Ahg488554 jgi|Araly1|488554|fgenesh2_kg.6__1688__AT5G16910.1
Length=3632
Score = 344 bits (186), Expect = 3e-93
Identities = 943/1296 (73%), Gaps = 102/1296 (8%)
Strand=Plus/Plus
Query 1165 TCTTGGTTTGTTCCTGACATGGAGGGTTCGCCACCCAAACCGAGAAGCAATGTGGTTGTG 1224
||||| |||||| |||| |||||| || || | ||||| ||| || || ||||| ||
Sbjct 912 TCTTGCATTGTTCTTGACTTGGAGGATTAAACATCAAAACCCAGACGCTATATGGTTATG 971
Query 1225 GGGAATGTCAACGACCTGTGAGCTTTGGTTTGCCTTGTCTTGGCTT-TTGGATCAGCTTC 1283
||||||||| | |||||||||||||||||||||||||||||| ||| ||||||| |
Sbjct 972 GGGAATGTCTGTGGTTTGTGAGCTTTGGTTTGCCTTGTCTTGGCTTCTTG-ATCAGCTCC 1030
Query 1284 CAAAACTCTGTCCGGTTAACAGATTA-ACTGAT-TT-AGGTGTTCTTAAAGAAC-GCTTT 1339
| || || || ||| ||||| | | || ||| || | || || || ||| | |||
Sbjct 1031 CTAAGCTATGCCCGATTAACCG-TGCCACCGATCTTCAAGTC--CTGAAGGAAAAG-TTT 1086
Query 1340 GAGTCTCCAA-ACCTCAGGAACCCCAAAGG-AAGATCTGATCTTCCGGGTAT-CGATGTG 1396
|| | || | | | ||| || || | || || ||| || ||||| || || |||||||
Sbjct 1087 GAAACACCGACAGC-CAGCAATCCGACCGGGAA-ATCCGACCTTCCTGG-ATTCGATGTG 1143
Query 1397 TTTGTCTCAACTGCAGA-CCCTGAGAAAGAACCACCTCTGGTCACAGCCAACACCATTCT 1455
|||||||| ||||| || ||| ||||||||||| || |||||||| || || |||||| |
Sbjct 1144 TTTGTCTCTACTGCGGATCCC-GAGAAAGAACCTCCCCTGGTCACTGCTAATACCATTTT 1202
Query 1456 CTCGATCCTTGCTGTTGATTACCCTGTGGAGAAACTTGCTTGCTACT-TGTCAGACGATG 1514
||||| || |||| || || || || ||||| ||| ||||||| | | || || ||||
Sbjct 1203 ATCGATTCTAGCTGCGGAATATCCGGTTGAGAAGCTTTCTTGCTA-TGTATCTGATGATG 1261
Query 1515 GAGGAGCT-TTGCTAACATTTGAAGCCTTGGCTCAAACAGCTAGCTTTGCAAGTACAT-- 1571
|||| || || || || |||||||| ||||| || | || |||||||||| ||||
Sbjct 1262 GAGGGGCGCTT-CTTACGTTTGAAGCAATGGCTGAAGCTGCGAGCTTTGCAA--ACATTT 1318
Query 1572 GGGTGCCATTTTG-CAGGAAACACAATATAGAGCCAAGGAACCCTGAGGCCTACTTTGGA 1630
|||| || ||||| | | ||||| || ||||| ||||| || || |||||||| |
Sbjct 1319 GGGTTCCTTTTTGTC-GTAAACATGCGATCGAGCCGAGGAATCCAGACTCCTACTTTAG- 1376
Query 1631 CAGAA-GCGTA-A-CTTTCTCAAGAACAAAGTCAGG-CTGGATTTTGTGAGGGAAAGGAG 1686
| || | | | | | || |||||||||||| | | ||| |||| |||| ||| ||||
Sbjct 1377 CTTAAAGAG-AGATCCTTA-CAAGAACAAAGTGAAGTCTG-ATTTCGTGAAGGACCGGAG 1433
Query 1687 GA-GAGTGAAGAGAGAATAT-GATGAGTTTAAGGTCAGAATCAACT-CATTGCCTGAAGC 1743
| | || ||| | || | | |||||||| || ||||| | ||| | |||||||| |
Sbjct 1434 -ACGGGTTAAGCGTGAGT-TCGATGAGTTCAAAGTCAGGGTTAACAGC-TTGCCTGATTC 1490
Query 1744 GATAAGGAGAAGGTCTGATGCTTATAACGTGC-AC-GAAGAGCT-AAGGGCTAAGAAGAA 1800
||| |||||| | |||||||||||| | ||| | ||||| | || | | | |||||
Sbjct 1491 GATCAGGAGACGTTCTGATGCTTATCA--TGCCAGAGAAGAAATTAAAGCC-ATGAAGAT 1547
Query 1801 ACAGATG--GAA-ATG-ATGATGGGAAACAATCCACAAGAAACTGTTATAG-TTCC-AAA 1854
|||| | ||| | | | |||| ||| | | | | || | || |||| |||
Sbjct 1548 GCAGAGGCAGAACAGGGACGATG--AAATTTTGGA---GCC-C-GTGA-AGATTCCGAAA 1599
Query 1855 GGCCACTTGGATGTCAGATGGTTCTCACTGGCCAGGGACTTGGT---CCTCTGG-AGAAA 1910
| | || |||||| | |||||| |||||||||| || ||||||| |||||| || |
Sbjct 1600 G-CTACATGGATGGCTGATGGTACTCACTGGCCTGGAACTTGGTTGACCTCTGCCAGTGA 1658
Query 1911 CCGATAACTCTCGAGGAGATCATGCTGGAATCATTCAGGCAATGTTGGCTCCTCCAAATG 1970
| || | | ||| || || || || |||||||||| |||||| || || | ||
Sbjct 1659 TC-ATG-C-CAA-AGGCGACCACGCCGGTATCATTCAGGTGATGTTGAAGCCACCGAGTG 1714
Query 1971 CA-GAACCAGTTT-ATGGAGCTGAAGCAGATGCTGAGAACTTAATTGATAC-AACAGACG 2027
| || ||| || | |||| || | || | | | || ||||| | ||| || |
Sbjct 1715 -ATGAGCCA-TTACACGGAG-TGTC-C-GAAG--G-GT--TTC-TTGAT-CTAACTGATG 1762
Query 2028 TTGACAT-CAGGCTACCAATGCTGGTCTATGTGTCGAGAGAGAAGCGTCCGGGTTATGAC 2086
| || || | | || ||| | || |||||||| || | ||||| || || ||||||||
Sbjct 1763 TGGATATTC-GACTCCCACTCCTTGTCTATGTTTCTCGTGAGAAACGACCTGGTTATGAT 1821
Query 2087 CACAACAAGAAAGCAGGAGCCATGAATGCTTTGGTTAGAAC--CAGCGCAATTATGTCTA 2144
|| |||||||| || ||||||||||| || | || ||| | | ||| | ||||||| |
Sbjct 1822 CATAACAAGAAGGCTGGAGCCATGAACGCCCTCGTCAGAGCTTCTGCG-A-TTATGTCAA 1879
Query 2145 ATGGCCCATTCATCCTCAATCTTGATTGTGACCACTACATCTACAACTCT-ATGGCTTTG 2203
|||| |||||||| ||||||||||| ||||| || ||||| ||||||||| | ||| ||
Sbjct 1880 ATGGACCATTCATACTCAATCTTGACTGTGATCATTACATATACAACTCTGA-GGCACTG 1938
Query 2204 AGAGAAGGAATGTGCTTCATGCTTGATCGTGGTGGCGATAGAATCTGCTATGTTCAGTTC 2263
|||||||| |||||||||||| | ||| | || || ||| | | ||||| ||||||||
Sbjct 1939 AGAGAAGGTATGTGCTTCATGATGGATAGAGGCGGGGATCGGCTTTGCTACGTTCAGTTT 1998
Query 2264 CCTCAGAGGTTTGAAGGTATTGACCCAAATGATCGTTATGCAAACCACAACACTGTCTTC 2323
|| ||| ||||||||||||||||||| ||| | ||||| || |||||||||||||||
Sbjct 1999 CCGCAGCGGTTTGAAGGTATTGACCCGTCGGATAGATATGCTAATCACAACACTGTCTTC 2058
Query 2324 TTTGATGTTAGTATGAGAGCT-TTGGATGGACTTCAAGG-TCCAATGTATGTGGGAACTG 2381
||||| || | ||||||||| ||| |||| ||| | || ||| | ||||| ||||| |
Sbjct 2059 TTTGACGTCAACATGAGAGCTCTTG-ATGGGCTT-ATGGGTCCGGTTTATGTCGGAACCG 2116
Query 2382 GCTG-CATCTTTCGGAGAA-CAGCTCTTTATGGATT 2415
| || | |||| || |||| | || |||||||||||
Sbjct 2117 GTTGTC-TCTTCCGAAGAATC-GCGCTTTATGGATT 2150
> Ahg482247 jgi|Araly1|482247|fgenesh2_kg.4__1307__AT2G33100.1
Length=3282
Score = 291 bits (157), Expect = 4e-77
Identities = 710/967 (73%), Gaps = 77/967 (8%)
Strand=Plus/Plus
Query 2744 GCTGAAGCAATCAG-TGTGATATCTTGCTTCTATGAGGACAAAACTGAATGGGGTA-AAA 2801
|||||||| || || ||| || ||||||| ||||| ||||| || |||||||| | | |
Sbjct 2131 GCTGAAGCCAT-AGCTGTCATTTCTTGCTGGTATGAAGACAATACCGAATGGGG-AGATA 2188
Query 2802 GAGTTGGATGGATCTATGGATCAGTGACTGAAGATGTAGTCACGGGATATCGAATGCACA 2861
|| | |||||||| || || || || |||||||| || || || || ||||| ||||| |
Sbjct 2189 GAATCGGATGGATTTACGGGTCGGTCACTGAAGACGTGGTGACAGGTTATCGTATGCATA 2248
Query 2862 ACAGAGGATGGAGATCAATCTACTGCGTGACAAAAAGAGACGCTTTCCGTGGAACAGCTC 2921
|| | || ||| | || || |||||| | |||||| | || ||||||||||| |||||||
Sbjct 2249 ACCGTGGTTGGCGGTCCATTTACTGCATCACAAAACGCGATGCTTTCCGTGGCACAGCTC 2308
Query 2922 CGATCAATCTAACGGATAGACTTCACCAGGTTCTGAGATGGGCAACAGGATCTGTTGAGA 2981
| |||||||| || || | || || || ||||| | ||||| ||||| ||||| || |
Sbjct 2309 CAATCAATCTCACTGACCGTCTCCATCAAGTTCTCCGTTGGGCCACAGGCTCTGTAGAAA 2368
Query 2982 TCTTCTTCTC-AAGGAACAATGCAATTTTTGCAACCAGAAGGATGAAGTTTTTGCAGAGA 3040
|||||||||| || |||||| || || || || ||||||||| | |||||| | ||| ||
Sbjct 2369 TCTTCTTCTCTAA-GAACAACGCCATGTTCGCGACCAGAAGGCTCAAGTTTCTCCAGCGA 2427
Query 3041 GTGGCTTACTTCAACGTTGGAATGTATCCATTCACATCGC-TATTCCTCATCGTCTACTG 3099
|| || ||| ||||||| || || || || || || || | | ||| | ||||||| ||
Sbjct 2428 GTCGCCTACCTCAACGTCGGGATCTACCCTTTTACCTC-CATCTTCTTGGTCGTCTATTG 2486
Query 3100 CATT-CTCCCTGCGATTTC-G-CTCTTCTCG-GGTCAATTCATAGTCCA-ATCACTCGAC 3154
| || |||||||| | || | |||||| | || ||||||| || || | | |||||
Sbjct 2487 C-TTCCTCCCTGC--TCTCTGTCTCTTC-AGCGGAAAATTCATCGTACAGAGC-CTCGAT 2541
Query 3155 AT-AACGTTCTTGAT-CTATCTCCTCTCG-ATAACAC-TCACGCT---CTGT-ATGCTAT 3206
|| || ||| | | ||| || |||| | || || | | || || || | || | |
Sbjct 2542 ATCCACTTTC-T-CTCCTACCTTCTCT-GCATCAC-CGTAACCCTAACCT-TAAT-C--T 2593
Query 3207 CACTCCTTGAGATCAAATGGTCAGGCATAACTCTCCATGAATGGTGGAGAAACGAGCAGT 3266
||||||| ||| |||||||||| || || || | |||||||||||||| || ||||
Sbjct 2594 CACTCCTGGAGGTCAAATGGTCGGGAATCGGACTGGAAGAATGGTGGAGAAATGAACAGT 2653
Query 3267 TCTGGGTCATAGGAGGTACAAGCGCACACCCT-GCAGCTGTTC-TTCAGGGTCTT-CTTA 3323
| ||| | |||||||| |||||||| || || ||||| | || |||| ||| || || |
Sbjct 2654 TTTGGTTAATAGGAGGCACAAGCGCTCA-TCTCGCAGCAG-TCGTTCAAGGT-TTGCTCA 2710
Query 3324 AGGTAATTGCAGGAGTTGATATCTCATTTACCTTGACTTCCAAGTCATCTGCACCAGAAG 3383
| ||||| || ||| | || ||||| || ||| |||| || || || || || |||||
Sbjct 2711 AAGTAATAGCCGGAATCGAAATCTCCTTCACCCTGACATCGAAATC--CT-CAGGAGAAG 2767
Query 3384 ATGGAGACGATGA-GT-TT-GCGGATCTGTATGTTGTGAAATGGA---GCTTTTTGATGG 3437
| || | ||||| | || || ||||| || | || ||||||| |||| || ||
Sbjct 2768 A-CGA-A-GATGACATCTTCGCTGATCTTTACATAGTAAAATGGACGGGCTTATTCATCA 2824
Query 3438 TTCCTCCATTAACTATCA-TGATGGTGAA--TATGATTGCAATTGCG-GTGGGGCTAGCG 3493
| || | || || |||| || | ||||| | || |||| || | | ||| ||| |
Sbjct 2825 TGCC-GC-TT-ACAATCATTG-TAGTGAACCT-TG-TTGCGATAGTGATTGGAGCT-TCC 2877
Query 3494 AGGACTCTGTACAGTCCGTTTCCACAGTGGAGTAAGCTT-GTTGGAGGAGTGTTCTTCAG 3552
||||| | |||||| | |||| || ||| | ||| || | |||||| | ||||| ||
Sbjct 2878 AGGACAATATACAGTGTGATTCCGCAATGGGGCAAG-TTACTAGGAGGAATATTCTTTAG 2936
Query 3553 CTTT-TGGGTGCTTTG--TCATCTGTATCCGTTTGCTAAAGGATTGATGGGAAGAAGAGG 3609
||| ||||| | ||| |||| |||||||||||||||||||||||||||| |||||||
Sbjct 2937 -TTTATGGGT-C-TTGACTCATATGTATCCGTTTGCTAAAGGATTGATGGGTCGAAGAGG 2993
Query 3610 CAGAG-TTCCGACCATAGTGTT-TGTGTGGTCAGGT-TTGTTGTCGATTATTGTGTCGTT 3666
| || |||| || || || || ||| ||||| || |||| |||||||| |||||| |
Sbjct 2994 AA-AGGTTCCAACAATTGT-TTATGTTTGGTCCGGGCTTGT-GTCGATTACCGTGTCGCT 3050
Query 3667 GCTTTGG 3673
|||||||
Sbjct 3051 GCTTTGG 3057
> Ahg918927 jgi|Araly1|918927|scaffold_100208.1
Length=229
Score = 158 bits (85), Expect = 4e-37
Identities = 94/98 (96%), Gaps = 1/98 (1%)
Strand=Plus/Plus
Query 2243 AGAATCTGCTATGTTCAGTTCCCTCAGAGGTTTGAAGGTATT-GACCCAAATGATCGTTA 2301
||||||| ||||||| |||||||||||| ||||||||||||| |||||||||||||||||
Sbjct 74 AGAATCTTCTATGTTGAGTTCCCTCAGAAGTTTGAAGGTATTGGACCCAAATGATCGTTA 133
Query 2302 TGCAAACCACAACACTGTCTTCTTTGATGTTAGTATGA 2339
||||||||||||||||||||||||||||||||||||||
Sbjct 134 TGCAAACCACAACACTGTCTTCTTTGATGTTAGTATGA 171
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145646331871
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5