BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G02890.1
Length=4131
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470259 jgi|Araly1|470259|fgenesh2_kg.1__213__AT1G02890.1 6045 0.0
Ahg490318 jgi|Araly1|490318|fgenesh2_kg.6__3452__AT4G02480.1 3118 0.0
Ahg337067 jgi|Araly1|337067|fgenesh1_pg.C_scaffold_1003632 414 2e-114
> Ahg470259 jgi|Araly1|470259|fgenesh2_kg.1__213__AT1G02890.1
Length=3969
Score = 6045 bits (3273), Expect = 0.0
Identities = 3763/3988 (94%), Gaps = 80/3988 (2%)
Strand=Plus/Plus
Query 75 CGGCGGCGGTGAAGAAGAAGAATTAGAGAGAGAGATATGGTTGATACGAGACGTAGCTCT 134
|||||||| ||||||||||| || ||||| || ||||||||| || ||||| ||||||
Sbjct 18 CGGCGGCGTTGAAGAAGAAG---TA-AGAGA-AG-TATGGTTGAGACCAGACGCAGCTCT 71
Query 135 TCTGCTTCCAAGCGTTTTTGTGCTGCAACAAGTTCATCCTCACGTCCTACCAAACGATCC 194
|| ||||||||||||||| |||| |||||||||||||||||| |||||||||||||||
Sbjct 72 TCCACTTCCAAGCGTTTTTCAGCTGAAACAAGTTCATCCTCACGCCCTACCAAACGATCC 131
Query 195 AAGGC-GGCGGCGGAACCGGCATCGTCTTCGTCGGCGAGTGAGGTGCCGATTGATAATCA 253
|| || |||||| ||||||||| | ||||||||||||||||||||||||||||| |||||
Sbjct 132 AA-GCGGGCGGCCGAACCGGCAGCATCTTCGTCGGCGAGTGAGGTGCCGATTGAGAATCA 190
Query 254 AGCACCGGTTTCGGATCCTGGATC-AATATCTGGAGACCCGGAACTTAGAACTTCTGATC 312
|| ||||||||||||||||||||| | ||||||||| | ||||| |||||||||||||
Sbjct 191 AGGACCGGTTTCGGATCCTGGATCGGA-ATCTGGAGAGCAAGAACTAAGAACTTCTGATC 249
Query 313 CGCAGAGTAACGATGCGGAGAGGCCAGTTACTACCACCGATGTGCCGGCGATGGAGACCG 372
|||||||||| |||||||| ||||||||||||| ||||| |||||| |||||||||||||
Sbjct 250 CGCAGAGTAATGATGCGGAAAGGCCAGTTACTAACACCGTTGTGCCCGCGATGGAGACCG 309
Query 373 ACACAAATCCAGAACTTGAAGGCTTGGTGACGCCTACACCTGCAGGTGAAGTGGTGGTGG 432
|||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct 310 ACACAAATCCAGAAGTTGAAGGCTTCGTGACGCCTACACCTGCAGGTCAAGTGGTGGTGG 369
Query 433 AAGCTGAGAAATCGAAATCCTCAAAGAAGCGGATTGCTAAGGCTCCTTGGGCCAAGCTTC 492
||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 370 AAGCTGAGAAATCAAAATCCTCCAAGAAGCGGATTGCTAAGGCTCCTTGGGCCAAGCTGC 429
Query 493 TTTCTCAGTTTCCTCAGAACCCTCATCT-TGTCATGAGAGGCTCTGTGTTTACTGTTGGA 551
||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct 430 TTTCTCAGTATCCTCAGAACCCTCAT-TGTGTCATGAGAGGCTCTGTGTTTACTGTTGGA 488
Query 552 CGGCGAGCCTGCGATTTATGTATCAGAGATCATTCTATGCCCAATGTTCTATGTGAACTA 611
||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 489 CGGCGAGGATGCGATTTATGTATCAGAGATCATTCCATGCCCAATGTTCTATGTGAACTA 548
Query 612 AGGCAGTCTGAGCACGGAGGTCCATCAGTTGCATCGCTGGAGATAATAGGGAATGGAGTA 671
|||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 549 AGGCAGTCTGAGCACGGAGGTCCATCGGTTGCATCACTGGAGATAATAGGGAATGGAGTA 608
Query 672 CTTGTTCAGGTCAATGGCAAGATTTACCAAAGGAGTACTTGTGTTCATCTACGGGGTGGC 731
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 609 CTTGTTCAGGTCAATGGCAAGATTTACCAAAGGAGTACTTGTGTTCATCTACGAGGTGGC 668
Query 732 GATGAAATTATCTTCACCACCCCTGGGAAACATGCTTATATATTTCAGCCTCTTAAAGAT 791
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 669 GATGAAATTATCTTCAGCACCCCTGGGAAACATGCTTATATATTTCAGCCTCTTAAAGAT 728
Query 792 GAAAATCTAGCTGCTCCAGACAGAACTTCTTCCTTGAGCCTTTTTGAAGCGCAGAGTGCC 851
|||||||||||| ||||||| ||| ||||||| |||||| ||||||||||||||||||||
Sbjct 729 GAAAATCTAGCTACTCCAGATAGAGCTTCTTCATTGAGCATTTTTGAAGCGCAGAGTGCC 788
Query 852 CCTCTGAAAGGGCTTCACGTTGAGACAAGAGCAAGAGACTCTTCATCTGTTGATGGAACT 911
||||||||||||||||| ||||||||||||||| ||||||| | || |
Sbjct 789 CCTCTGAAAGGGCTTCATGTTGAGACAAGAGCAGGAGACTC-T--TC----------A-- 833
Query 912 GCCTCTTTATTGGCGTCTATATCAAAGTTACAAAATGTCCCTTTTCTACCACCTACTGCT 971
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 834 ---TCTTTATTGGCGTCTATATCAAAGTTACATAATGTCCCTTTTCTACCACCTACTGCT 890
Query 972 AAAAGTGTCAAAAGGCAGCAAAATTCAGAGGTCCCTGTGT-TACCTTCTAGCTGCGATGA 1030
||||||||||||| ||||||||||||||||| ||||| | |||||||||||||| ||||
Sbjct 891 AAAAGTGTCAAAATTCAGCAAAATTCAGAGGTTCCTGT-TCTACCTTCTAGCTGCAATGA 949
Query 1031 TTTTATTCTGGATGTTGACTTGAACGATGCTGATAGTAATAATGATCATGCTGCTATTGC 1090
|| |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||
Sbjct 950 TTGTATTCTGGATGTTGACATGAACGATGATGATAGTCATAATGATCATGCTGCTATTGC 1009
Query 1091 TTCAATGGAGAAAACTGTTGCTTCGACTTCTTGTGCTGCCAACGATGACCATG-ATGCAG 1149
||||| ||||||||||||||||||||| |||||||||||||||||||||| || ||||||
Sbjct 1010 TTCAACGGAGAAAACTGTTGCTTCGACCTCTTGTGCTGCCAACGATGACC-TGAATGCAG 1068
Query 1150 ATGGGAATGGAATGGATCCTTTTCAAGAACCTGAGGCTGGAAATATTCCTGATCCTGCTT 1209
|||| |||||||||||||||||||||||| |||||| |||||||||||||| | ||| ||
Sbjct 1069 ATGGAAATGGAATGGATCCTTTTCAAGAAGCTGAGGGTGGAAATATTCCTGGTTCTGGTT 1128
Query 1210 ATGAAATTAGACCAATTTTGAGTTTACTTGGGGATCCTTCTGAATTTGATTTAAGGGGTA 1269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1129 ATGAAATTAGACCAATTTTGAGTTTACTTGGGGATCCTTCTGAATTTGATTTAAGGGGTA 1188
Query 1270 GCATTTCCAAAATACTGGTGGATGAACGAAGGGAAGTGAGGGAAATGCCGAAAGAATATG 1329
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1189 GCATTTCCAAAATACTGGTGGATGAACGAAGGGAAGTGAGGGAAATGCTGAAAGAATATG 1248
Query 1330 AACGTCCATCAGCTTCGGTATTAACTAGACGTCAAGCGCATAAGGATAGTCTGCGAGGAG 1389
||||||||||||||||||| ||||||||||||||||| ||||||||||| ||||||||||
Sbjct 1249 AACGTCCATCAGCTTCGGTGTTAACTAGACGTCAAGCACATAAGGATAGACTGCGAGGAG 1308
Query 1390 GAATACTCAATCCTCAGGACATAGAAGTTTCTTTTGAGAACTTCCCATATTTCTTAAGTG 1449
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1309 GAATACTCAATCCTCAGGACATAGAAGTTTCTTTTGAGAACTTTCCATATTTCTTAAGTG 1368
Query 1450 GCACAACTAAGGATGTTTTGATGATATCCACATATGCCCATATAAAGTATGGAAAGGAAT 1509
|||||||||||||||||||||||||||| |||||||||||||| |||||||||| ||| |
Sbjct 1369 GCACAACTAAGGATGTTTTGATGATATCAACATATGCCCATATGAAGTATGGAAGGGAGT 1428
Query 1510 ATGCAG-AGTATGCATCAGATTTGCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCA 1568
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1429 ATGC-GAAGTATGCATCAGATTTGCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCA 1487
Query 1569 TCTGGCTCTGAGATATATCAGGAAATGTTAGCAAAAGCGCTTGCGAAACAATGTGGGGCC 1628
||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1488 TCTGGTTCTGAGATATATCAGGAAATGTTAGCAAAAGCGCTTGCGAAAAAATTTGGGGCC 1547
Query 1629 AAATTGATGATTGTTGACTCTCTCTTGTTACCTGGGGGTTCAACACCCAAGGAAGCAGAT 1688
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1548 AAATTGATGATTGTTGACTCTCTCTTGTTACCTGGGGGATCAACACCCAAGGAAGCAGAT 1607
Query 1689 ACTACCAAAGAAAGTTCTAGGCGTGAAAGACTGTCCGTGCTTGCTAAACGAGCTGTACAA 1748
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1608 TCTACCAAAGAAAGTTCTAGGCGTGAAAGACTGTCTGTGCTTGCTAAACGAGCTGTACAG 1667
Query 1749 GCTGCACAAGCTGCTGTTTTGCAGCATAAGAAACCAATTTCAAGTGTAGAGGCTGGTATA 1808
||||||||||||||||||||||||||||||||||||||||||||||| |||| || ||||
Sbjct 1668 GCTGCACAAGCTGCTGTTTTGCAGCATAAGAAACCAATTTCAAGTGTTGAGGATGATATA 1727
Query 1809 ACAGGTGGATCAACATTGAGCTCTCAGGCTGTTCGGAGGCAAGAAGTATCAACTGCAACC 1868
||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||
Sbjct 1728 ACAGGTGGATCAACATTAAGCTCTCAGGCTGTTCCGAGGCAAGAAGTATCAACTGCAACC 1787
Query 1869 TCTAAAAGTTACACCTTCAAAGCAGGTGATCGAGTAAGGTTTTTAGGCCCTTCAA----- 1923
||||||||||| ||||| |||||||||||| ||||||||||| ||||||||||||
Sbjct 1788 TCTAAAAGTTATACCTTTAAAGCAGGTGATAGAGTAAGGTTTCTAGGCCCTTCAACTTCT 1847
Query 1924 ---CTT-CTTCTCTTGCTTCTCTCCGAGCTCCACCTAGGGGACCGGCAACAGGTTTTCAA 1979
||| |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1848 TCTCTTGCTTCTCTTGCTTCTCTCCAAGCTCCACCTAGGGGACCGGCAACAGGTTTTCAG 1907
Query 1980 GGAAAAGTACTCCTTGCGTTTGAAGGCAATGGATCTTCAAAAATCGGGGTTAGATTTGAT 2039
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct 1908 GGAAAAGTACTCCTTGCATTTGAAGGCAATGGATCTTCAAAAATTGGGGTTAGATTTGAT 1967
Query 2040 AGATCGATACCAGATGGCAATGATCTTGGTGGTCTATGCGAAGAAGACCATGGttttttt 2099
|| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1968 AGGTCGATACCAGATGGCAATGATCTTGGTGGTCTATGCGAAGAAGACC----------- 2016
Query 2100 tGTACTGCGAGTTCTCTTCGGTTAGAAAGTTCTTCCAGTGACGATGCTGATAAACTTGCC 2159
| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2017 ---A-TGCGAGTTCTCTTCGGTTAGAAAGTTCTTCCAGTGACGACGCTGATAAACTTGCC 2072
Query 2160 ATTAATGAAATCTTTGAGGTAGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTC 2219
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2073 ATTAATGAAATCTTTGAGGTGGCTTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTC 2132
Query 2220 CTCAAAGACATTGAGAAATCTGTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGC 2279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2133 CTCAAAGACATTGAGAAATCTGTGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGC 2192
Query 2280 AAGCTTGAGAATTTACCGGAGAATATTGTTGTCATAGCTTCGCAAACCCAGTTGGACAAC 2339
||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
Sbjct 2193 AAGCTTGAGAATTTACCCGAGAATATTGTTGTCATAGCTTCACAAACCCAGTTGGACAGC 2252
Query 2340 CGAAAGGAAAAATCCCACCCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACA 2399
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2253 CGAAAGGAAAAATCCCACCCTGGAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACA 2312
Query 2400 GCACTGCTGGACCTTGCATTTCCGGATACTTTTGGTGGTAGACTGCAGGATAGGAACACA 2459
||||| ||||| |||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 2313 GCACTACTGGATCTTGCATTTCCGGATAATTTTGGTGGTAGACTGCAGGATAGGAACAAA 2372
Query 2460 GAAATGCCTAAAGCAGTGAAACAAATCACTAGGCTATTTCCAAACAAAGTGACCATCCAA 2519
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2373 GAAATGCCTAAATCAGTGAAACAAATCACTAGGCTATTTCCAAACAAAGTGACCATCCAG 2432
Query 2520 TTACCTGAGGATGAAGCTTCGCTGGTCGACTGGAAGGATAAACTTGAACGTGATACTGAG 2579
||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||
Sbjct 2433 TTACCTGAGGATGAAGCTTTGCTGGTGGACTGGAAGGATAAACTTGAACGTGATACAGAG 2492
Query 2580 ATCCTGAAGGCTCAAGCTAATATTACAAGCATCCGTGCGGTCCTTAGCAAAAATCAGCTA 2639
|||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct 2493 ATCCTGAAGGCTCAAGCTAATATTACCAGCATCCGTGCGGTCCTTAGCAAAAACCATCTA 2552
Query 2640 GTCTGCCCTGACATTGAAATCTTGTGCATCAAAGATCAAACCCTTCCTTCTGATAGTGTG 2699
|||||||||||| |||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct 2553 GTCTGCCCTGACCTTGAAACCTTGTGCATCAAAGACCAAACCCTTCCTTCTGATAGTGTG 2612
Query 2700 GAGAAAGTGGTTGGCTTTGCTTTCAATCACCATCTTATGAACTGCTCAGAACCTACAGTC 2759
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2613 GAGAAAGTGGTTGGCTTTGCTTTCAATCACCATCTTATGAACTGCGCAGAACCTACAGTC 2672
Query 2760 AAGGACAACAAGCTTATCATCTCGGCAGAAAGCATCACATATGGCCTGCAGCTGTTGCAT 2819
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2673 AAGGACAACAAGCTTATCATCTCGGCAGAAAGCATCACATATGGCCTGGAGCTGTTGCAT 2732
Query 2820 GAGATTCAAAACGAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACAGAGAAT 2879
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2733 GGGATTCAAAACGAAAACAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACTGAGAAT 2792
Query 2880 GAATTCGAGAAAAAACTACTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTTCTTTC 2939
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2793 GAATTCGAGAAAAAACTCCTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTTCTTTC 2852
Query 2940 AGTGATATTGGGGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCT 2999
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2853 AGTGATATTGGGGCTTTGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCT 2912
Query 3000 CTTCAAAGACCCGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACAAAGGGTATACTA 3059
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2913 CTTCAAAGACCCGAATTGTTTGGCAAAGGTCAACTTACAAAGCCTACTAAGGGTATACTG 2972
Query 3060 TTGTTTGGACCGCCTGGTACGGGGAAGACAATGCTGGCAAAAGCTGTAGCAACCGAGGCT 3119
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 2973 TTGTTTGGACCGCCTGGTACGGGGAAGACAATGTTGGCAAAAGCTGTAGCAACTGAGGCT 3032
Query 3120 GGGGCAAACTTTATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGA 3179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3033 GGGGCAAACTTTATCAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGA 3092
Query 3180 GAGAAGTACGTTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTT 3239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3093 GAGAAGTACGTTAAAGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTT 3152
Query 3240 GTTGATGAGGTTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATG 3299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3153 GTTGATGAGGTTGATAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATG 3212
Query 3300 CGTAAGATGAAGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAA 3359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3213 CGTAAGATGAAGAACGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAA 3272
Query 3360 AGGGTTTTAGTATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGA 3419
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3273 AGAGTTTTAGTATTGGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGA 3332
Query 3420 CGGCTTCCCCGAAGGTTGATGGTTAATCTGCCGGATTCAGCAAACAGATCGAAGATCTTG 3479
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3333 CGGCTTCCCCGAAGGTTGATGGTTAATCTACCGGATTCAGCAAACAGATCGAAGATCTTG 3392
Query 3480 AGCGTGATTTTGGCGAAAGAAGAGATGGCAGAAGACGTAGACTTAGAAGCAATAGCAAAT 3539
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3393 AGCGTAATTTTGGCGAAAGAAGAGATGGCAGAAGACGTAGATTTAGAAGCAATAGCAAAT 3452
Query 3540 ATGACAGATGGGTACTCAGGGAGTGACTTAAAGAATCTTTGCGTGACCGCGGCACATCTT 3599
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 3453 ATGACAGATGGGTACTCAGGGAGTGATTTAAAGAATCTTTGCGTGACCGCGGCACATCTT 3512
Query 3600 CCTATCCGAGAGATTCTTGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAAGCCGAAAAC 3659
||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||
Sbjct 3513 CCTATCCGAGAGATTCTGGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAATCCGAAAAC 3572
Query 3660 CGAGCAATGCCACAGCTATATAGCAGTACAGACGTTAGACCCTTGAACATGAATGATTTC 3719
||| ||| ||||||| |||||||||||| |||| ||||||||||||||||||||||||||
Sbjct 3573 CGACCAACGCCACAGTTATATAGCAGTAGAGACATTAGACCCTTGAACATGAATGATTTC 3632
Query 3720 AAAACCGCACATGATCAGGTATGTGCGAGTGTGGCGTCTGATTCATCGAACATGAATGAG 3779
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3633 AAGGCCGCACATGATCAGGTATGTGCGAGTGTGTCGTCTGATTCATCGAACATGAATGAG 3692
Query 3780 CTCCAGCAATGGAACGAGCTCTATGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGT 3839
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3693 CTCCAGCAATGGAACGAGCTCTACGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGC 3752
Query 3840 TACTTCATGTAAAGAGAAAACAGAGAGGTTGTGTTTTGTTAGTTtatatatatatatata 3899
||||||||||||||||||||||||||||||||||||| | ||||||| | ||||||||
Sbjct 3753 TACTTCATGTAAAGAGAAAACAGAGAGGTTGTGTTTTCT-AGTTTATC-A-ATATATAT- 3808
Query 3900 tatatatataAATCTCTCTCTAATTTATATGTTGTACagagagattgagagagaagagag 3959
| || | || ||||| | |||||||||| |||||||||||||| ||||||||||||||
Sbjct 3809 T-TA-A-ATC--TCTCT-T-TAATTTATATATTGTACAGAGAGATAGAGAGAGAAGAGAG 3861
Query 3960 TCAGTCCCCTCTTGAATTGTCTAAAAAATGTTTTGCTCGGAGCTGCCTCAATTCTTTTCT 4019
|| | |||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct 3862 TC---C---TCTTGAATTGTCTAAAAA-TGTTTTGTTCGGAGCTGCCTCAATTCTTTTCT 3914
Query 4020 TTCTTTCTCCaaaaaaaTATTCTAATAT 4047
|||||||||||||||||||| ||| |||
Sbjct 3915 TTCTTTCTCCAAAAAAATAT-CTA-TAT 3940
> Ahg490318 jgi|Araly1|490318|fgenesh2_kg.6__3452__AT4G02480.1
Length=4119
Score = 3118 bits (1688), Expect = 0.0
Identities = 3080/3738 (82%), Gaps = 151/3738 (4%)
Strand=Plus/Plus
Query 197 GGCGGCGGCGGAACCGGCATCG-TCTTCGTCGGCGAGTGAGGTGCCGATTGATAATCAAG 255
|||||||||||||||||| | | ||||| || ||||| ||||| ||||| || |||||||
Sbjct 286 GGCGGCGGCGGAACCGGC-TGGTTCTTCATCAGCGAGCGAGGTTCCGATCGAGAATCAAG 344
Query 256 CACCGGTTTCGGATCCTGGATC-AATATCTGGAGACCCGGAACTTAGAACTTCTGATCCG 314
||| | ||||||||||||||| | ||||||||| ||||||||| || | ||||||||
Sbjct 345 GACCTGCTTCGGATCCTGGATCGGA-ATCTGGAGAGCCGGAACTTGGATCCTCTGATCCA 403
Query 315 CAGAG-TAACGATGCGGAGAGGCCAGTTACTACCACCGATGTGCCGGCGATGGAG-A--- 369
||| | || |||||||| | ||| ||| |||||| ||||| |||| ||||||| |
Sbjct 404 CAG-GCTATGGATGCGGACAAGCCTGTTGTTACCACTGATGTCCCGGTGATGGAGAACTC 462
Query 370 -CC-G--A-C-A--CAAATCCAGAACTTGAAGGCTTGGTGACGCCTACAC-CTGCAGGTG 420
|| | | | | | || || ||| |||||| ||||| ||| ||||| | ||||||||
Sbjct 463 TCCTGAAACCGACGCTAACCCTGAAGTTGAAGTCTTGGCGACACCTAC-CGTTGCAGGTG 521
Query 421 AAGTGGTGGTGGAAGCTGAGAAATCGAAATCCT-CAAAGAAGC-GGATTGCT-AAGGCTC 477
||||| ||| ||| ||||||||||| || || | ||||||| || || | |||||||
Sbjct 522 AAGTGATGGCGGATGCTGAGAAATC-CAAGGCTGCTAAGAAGCGGGCTT--TAAAGGCTC 578
Query 478 CTTGGGCCAAGCTTCTTTCTCAGT-TTCCTCAGAAC-CCTCATCTTGTCATGAGAGGCTC 535
| ||||| ||||| ||||| |||| || ||||| || ||||| | | ||||||||||| |
Sbjct 579 CATGGGCGAAGCTACTTTCCCAGTATT-CTCAG-ACTCCTCACCGTATCATGAGAGGCCC 636
Query 536 TGTGTTTACTGTTGGACGGCGA-GCCTGCGATTTATGTATCAGAGATCATTCTATGCCCA 594
||||||||||||||||| || | | || ||| ||| ||||||||| || |||||||||
Sbjct 637 TGTGTTTACTGTTGGAC-GCAAGGGATGTGATCTATCTATCAGAGACCAAACTATGCCCA 695
Query 595 ATGTTCTATGTGAACT-AAGGCAGTCTGAGCACGGAGGTCCATCAGTTGCATCGCTGGAG 653
|| |||||||| || |||||||||||| || ||||||||||||||||| ||||||
Sbjct 696 GCACCCTGTGTGAACTGAA-GCAGTCTGAGCATGGTGGTCCATCAGTTGCATCCCTGGAG 754
Query 654 ATAATAGGGAATGGAG-TACTTGTTCAGGTCAATGGCAAGAT-TTACCA-AAGGAGTACT 710
|||||||||||||||| || |||||||||||||||||||| | |||||| || ||||||
Sbjct 755 ATAATAGGGAATGGAGTTA-TTGTTCAGGTCAATGGCAAG-TGTTACCAGAA-AAGTACT 811
Query 711 TGTGTTCATCTACGGGGTGGCGATGAAATTATCTTCACCACCCCTGGGAAACATGCTTAT 770
|||||||||||||||||||| ||||| | ||||||| || ||| ||||||| |||||
Sbjct 812 TGTGTTCATCTACGGGGTGGTGATGAGGTGATCTTCAGCATTGCTGCGAAACATTCTTAT 871
Query 771 ATATTTCAGCCTCTTAAAGATGAAAATCTAGCTGCTCCAGACAGAACTTCTTCCTTGAGC 830
|||||||| ||||||||||||||||||||||||||||| |||||| ||||||| |||||
Sbjct 872 ATATTTCAACCTCTTAAAGATGAAAATCTAGCTGCTCCTGACAGAGCTTCTTCGTTGAGT 931
Query 831 CTTTTTGAAGCGCAG-AGTGCCCCTCTGAAAGGGCTTCACGTTGAGACAAGAGCAAGAGA 889
| | |||||| | | ||||||||||||||||| |||| || |||||||||||| ||||
Sbjct 932 ATATGTGAAGCTC-GTGGTGCCCCTCTGAAAGGGGTTCATGTCGAGACAAGAGCAGGAGA 990
Query 890 CTCTTCATCTGTTGATGGAACTGCCTCTTTATTGGCGTCTATATCAAAGTTA-C-AAAAT 947
||| ||| |||||||||| || ||| ||||||| ||| |||||||| || | || |
Sbjct 991 CTCCTCAGCTGTTGATGG---GGCTTCTATATTGGCATCTCTATCAAAG-TACCGCAACT 1046
Query 948 GTCCCTTTTCTACCACCTACTGCTAAAAG-TGTCAAAAGGCAGCAAAATTCAGAGGTCCC 1006
| | | |||||||||| | |||| |||| | ||| |||||||||||| | | ||| ||
Sbjct 1047 -TACATCTTCTACCACCAATTGCT-AAAGCGGCCAAGAGGCAGCAAAATCCTGCGGTTCC 1104
Query 1007 TGTGTTACCTTCTAGCTGCGATGATT-TTA-TTCT-GGATGTTGACTTGAACGATGCTGA 1063
|||| ||||||| || | | |||||| ||| ||| |||| ||| |||||||||||||
Sbjct 1105 TGTGGTACCTTCCAGTTTCAATGATTATTACATCTCGGATACAGACATGAACGATGCTGA 1164
Query 1064 TAGTAATAATGATCATGCTGCTATTGCTTCAATGGAGAAAACTG-T--TGCTTCGACTTC 1120
|||||| ||||| ||||||||| ||||||| |||||||||||| | |||||| || ||
Sbjct 1165 TAGTAACAATGACCATGCTGCTGTTGCTTCTGTGGAGAAAACTGCTGCTGCTTCTACCTC 1224
Query 1121 TTGTGCTGCCAACGATG-ACCAT-GATG-CAGATGGGAATGGAATGGATCCTTTTCAAGA 1177
|||| ||||||| || | ||| | |||| | ||||| | |||| ||||||||||||||||
Sbjct 1225 TTGTACTGCCAATGA-GAACC-TGGATGTC-GATGGCAGTGGATTGGATCCTTTTCAAGA 1281
Query 1178 ACCTGA-GGCTGGAAATATTCCTGATCCTGCTTATGAAATTAGACCAATTTTG-AGTTTA 1235
| |||| || ||||||| |||||| ||||| |||||||||||||||||| || | ||
Sbjct 1282 AGCTGATGG-TGGAAATGTTCCTGGTCCTGGTTATGAAATTAGACCAATCGTGCACCTT- 1339
Query 1236 CTTGGGGA-TCCTTCTGAATTTGATTTAAGGGGTAGCATTTCCAAAATACTGGTGGATGA 1294
||||| || | ||||| ||||||| || |||| ||||| ||| || |||| |||||||
Sbjct 1340 CTTGGTGAGT-CTTCTTCATTTGATATACGGGGCAGCATCTCC--AA-ACTGCTGGATGA 1395
Query 1295 ACGAAGGGAAGTGAGGGAAATGCC-GAAAGAATATGAACGTCCATCAGCTTCGGTATTAA 1353
||||||||||||||||| ||| || | ||||| ||| | | ||||| | | ||| |
Sbjct 1396 ACGAAGGGAAGTGAGGG-AATTCCTCAGAGAATTTGACCTTTCATCAAC-T--ATATCGA 1451
Query 1354 CTAGACGTCAAGCGCATAAGGATAGTCTGCGAGGAGGAATACTCAATCCTCAGGACATAG 1413
||||||| |||||| |||||||||||||||||||||| |||||||| | || ||||||
Sbjct 1452 CTAGACGCCAAGCGTTTAAGGATAGTCTGCGAGGAGGAGTACTCAATGCGCAAAACATAG 1511
Query 1414 AAGTTTCTTTTGAGAACTTCCCATATT-TCTTAAGTGGC-ACAACTAAGGATGTTTTGAT 1471
|| |||||||||||||||||||||||| | |||||| || || || |||| |||||||||
Sbjct 1512 AAATTTCTTTTGAGAACTTCCCATATTAT-TTAAGT-GCTACGACAAAGGGTGTTTTGAT 1569
Query 1472 GATATCCACATATGCCCATAT-AAAGTATGGAAAGGAA-TATGCAGAGTATGCATCAGAT 1529
|| ||| | | || |||||| || | | || ||| || |||||| | | |||| ||||
Sbjct 1570 GACATCGATGTTTGTCCATATGAACGGA-GG-AAGCAAGTATGCAAATTTTGCAACAGAA 1627
Query 1530 TTGCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCATCTGGCTCTGAGATATATCAG 1589
||| | ||||||||||||||| | ||||||||||| ||||| ||||||||||||||||||
Sbjct 1628 TTGACTACAGCGTGTCCCCGTGTATTACTCTCTGGGCCATCAGGCTCTGAGATATATCAG 1687
Query 1590 GAAATGTTAGCAAAAGCGCTTGCGAAACAA-TGTGGGGCCAAATTGATGATTGTTGACTC 1648
|||||||| | ||||||||||| ||| || | |||||||||||||||||||||||||||
Sbjct 1688 GAAATGTTGGTGAAAGCGCTTGCTAAA-AATTTTGGGGCCAAATTGATGATTGTTGACTC 1746
Query 1649 TCTCTTGTTACCTGGGGGTTCAACACCCAAGGAAGCAG-ATACTACCAAAGAAAGTTCTA 1707
||| ||||| |||||||| ||| || ||| |||||| | || || | |||||| ||||||
Sbjct 1747 TCTTTTGTTGCCTGGGGGATCACCAGCCAGGGAAGCTGAAT-CTTCTAAAGAAGGTTCTA 1805
Query 1708 GGCGTGAAAGACTGTCCGTGCTTGCTAAACGAGCTGTACAAGCTGCACAAGCTGCTGTTT 1767
|||||||||| ||||| |||| || ||| ||||||| || ||||||||| || |
Sbjct 1806 GGCGTGAAAGGCTGTCTATGCTAGCGAAAAGAGCTGTTCAGGCTGCACAA------GTAT 1859
Query 1768 TGCAGCATAAGAAACCAATTTCAAGTGTAGAGGCTGGTATAACAGGTGGATCAACATTGA 1827
|||||||||||||||| | ||||||||| || |||| |||||||||||| |||||||| |
Sbjct 1860 TGCAGCATAAGAAACCGACTTCAAGTGTTGATGCTGATATAACAGGTGGCTCAACATTAA 1919
Query 1828 GCTCTCAGGCTGTT-CGGAGGCAAGAAGTATCAACTGCAACCTCTAAAAGTTACACCTTC 1886
||||||||||| || | | |||||||| ||||| ||||| |||||||| | | | |
Sbjct 1920 GCTCTCAGGCT-TTGCCAAAACAAGAAGTGTCAACAGCAACTTCTAAAAG-T-GA-C--C 1973
Query 1887 AAAGCAGGTGATCGAGTAAGGTTTTTAGGCCCTTCAACTTCTTCTCTTGCTTCTCTCCGA 1946
| | || | | || ||| |||| || || ||||| | || ||||||| | |
Sbjct 1974 ---G-A-GT-A---A--AA--TTTGTAGGTCCATCGGCTTCTGCAATTTCTTCTCTTCAA 2020
Query 1947 -GCTCCACCTAGGGGACCGGCAACAGGTTTTCAAGGAAAAGTACTCCTTGCGTTTGAAGG 2005
|| || | ||||||||| || | ||||| || ||||||||||||||||| |||||||
Sbjct 2021 GGC-CCGCTTAGGGGACCAGCCCCTGGTTTCCAGGGAAAAGTACTCCTTGCATTTGAAGA 2079
Query 2006 CAA-TGGAT-CTTCAAAAATCGGGGTTAGATTTGATAGATC-GATACCAGATGGCAATGA 2062
||| | | | |||||||||| ||| ||||||| ||||| || | ||| ||||||||||||
Sbjct 2080 CAACT-G-TGCTTCAAAAATTGGGATTAGATTCGATAGGTCTG-TACAAGATGGCAATGA 2136
Query 2063 TCTTGGTGGTCTATGCGAAGAAGACCATGGttttttttGTACTGCGAGTTCTCTTCGGTT 2122
||||||||| || ||||||| ||||||||||||||| ||| |||| || || ||||||||
Sbjct 2137 TCTTGGTGGCCTCTGCGAAGGAGACCATGGTTTTTTCTGTGCTGCTAGCTCACTTCGGTT 2196
Query 2123 AGAAAGTTCTTCCAGTGACGATGCTGATAAACTTGCCATTAATGAAATCTTTGAGGTAGC 2182
|||| ||||||| || || |||||||||||||| ||| ||||||||||||||||||| ||
Sbjct 2197 AGAAGGTTCTTCTAGCGATGATGCTGATAAACTCGCCGTTAATGAAATCTTTGAGGTCGC 2256
Query 2183 TTTTAATGAAAGTGAAAGAGGGTCATTGATATTGTTCCTCAAAGACATTGAGAAATCT-G 2241
| || ||| |||||| |||||||| | ||||||||||| ||||| ||||||||||||
Sbjct 2257 ATATAGTGAGAGTGAAGGAGGGTCACTAATATTGTTCCTGAAAGATATTGAGAAATCTCT 2316
Query 2242 TGTCGGGGAACACTGATGTGTATATAACTTTGAAGAGCAAGCTTGAGAATTTACCGGAGA 2301
||| |||||||| |||||||||| ||| |||||||||||||| |||| ||||||||| |
Sbjct 2317 TGT-GGGGAACAGTGATGTGTATGCAACCTTGAAGAGCAAGCTCGAGACTTTACCGGAAA 2375
Query 2302 ATATTGTTGTCATAGCTTCGCAAACCCAGTTGGACAACCGAAAGGAAAAATCCCACCCTG 2361
|||| |||||||| || || || ||||||||||||| ||||||||| |||||||| ||||
Sbjct 2376 ATATAGTTGTCATGGCCTCACAGACCCAGTTGGACAGCCGAAAGGAGAAATCCCATCCTG 2435
Query 2362 GAGGTTTCTTGTTCACAAAGTTTGGCAGCAACCAGACAGCACTGCTGGACCTTGCATTTC 2421
||||||||||||| || |||||||| |||| ||||| ||||| ||||| || |||||||
Sbjct 2436 GAGGTTTCTTGTTTACTAAGTTTGGTGGCAATCAGACGGCACTACTGGATCTAGCATTTC 2495
Query 2422 CGGATACTTTTGGTGGTAGACTGCAGGATAGGAA-CACAGAAATGCCTAAAGCAGTGAAA 2480
|||||| ||| ||||| |||||| |||| ||| || ||||| |||||| || |||||
Sbjct 2496 CGGATA-ATTT--TGGTAAACTGCACGATA-GAAGCAAAGAAACACCTAAATCAATGAAA 2551
Query 2481 CAAATCACTAGGCTATTTCCAAACAAAGTGACCATCCAATTACCTGAGGATGAAGCTTCG 2540
||||| ||| | |||||||| |||||||| ||||||| |||||| ||||||||||||
Sbjct 2552 CAAATAACTCGACTATTTCCTAACAAAGTCCCCATCCAGTTACCTCAGGATGAAGCTTTA 2611
Query 2541 CTGGTC-GACTGGAAGGATAAACTTGAACGTGATACTGAGATCCTGAAGGCTCAAGCTAA 2599
|| || || |||||||| ||||| || ||||| || ||||| |||||| ||| |||||
Sbjct 2612 CT-CTCTGATTGGAAGGAGAAACTCGACCGTGACACAGAGATTTTGAAGGTTCAGGCTAA 2670
Query 2600 TATTACAAGCATCCGTGCGGTCCTTAG-CAAAAATCAG-CTAGTCTGCCCTGACATTGAA 2657
||| || ||||||| ||| |||| | | |||||| | | || | |||||||||| ||| |
Sbjct 2671 TATAACCAGCATCCTTGCAGTCC-TCGCCAAAAA-CCGACTTGACTGCCCTGACCTTGGA 2728
Query 2658 ATCTTGTGCATCAAAGATCAAACCCTTCCTTCTGATAGTGTGGAGAAAGTGGTTGGCTTT 2717
| ||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||
Sbjct 2729 ACCTTGTGCATCAAAGATCAAACCCTTCCATCTGAAAGTGTTGAAAAAGTGGTTGGCTGG 2788
Query 2718 GCTTTCAATCACCATCTTATGA-ACTGCTCAGAACCTACAGTCAAGGACAACAAGCTTAT 2776
||||| |||||||||||||| | ||| |||||||| ||| || |||||||||||| |
Sbjct 2789 GCTTTTGGTCACCATCTTATGATA-TGCAAAGAACCTATAGTTAAAGACAACAAGCTTGT 2847
Query 2777 CATCTCGGCAGAAAGCATCACATATGGCCTGCAGCTGTTGCATGAGATTCAAAACGAAAA 2836
||||| ||||||||||| ||||||||||||||| |||| ||||| ||||| ||||||||
Sbjct 2848 TATCTCTGCAGAAAGCATTACATATGGCCTGCAGATGTTACATGATATTCAGAACGAAAA 2907
Query 2837 CAAGAGCACAAAGAAATCTCTGAAAGATGTTGTTACAGAGAATGAATTCGAGAAAAAACT 2896
|||||| |||||| ||||| || ||||||||||| ||||| ||||| |||||||||||
Sbjct 2908 CAAGAGTTTAAAGAAGTCTCTCAAGGATGTTGTTACTGAGAACGAATTTGAGAAAAAACT 2967
Query 2897 ACTATCAGACGTCATTCCTCCAAGTGATATCGGTGTTT-CTTTCAGTGATATTGGGGCTT 2955
| || || |||||||| || || ||||| ||||||| |||| | |||||||||||||
Sbjct 2968 GTTGTCGGATGTCATTCCACCTAGCGATATAGGTGTTTCCTTTGA-TGATATTGGGGCTC 3026
Query 2956 TGGAAAATGTGAAAGATACCTTGAAGGAGTTGGTGATGCTTCCTCTTCAAAGACCCGAAT 3015
|||||||||||||||| || ||||||||||||||||||||||||||||| ||||| ||||
Sbjct 3027 TGGAAAATGTGAAAGAAACATTGAAGGAGTTGGTGATGCTTCCTCTTCAGAGACCGGAAT 3086
Query 3016 TGTTTGGCAAAGGTCAACTTACAAAGCCTAC-AAAGGGTATACTATTGTTTGGACCGCCT 3074
||||||||||||| || || ||||||||||| ||| |||||||| ||||||||||| |||
Sbjct 3087 TGTTTGGCAAAGGCCAGCTCACAAAGCCTACGAAA-GGTATACTGTTGTTTGGACCTCCT 3145
Query 3075 GGTACGGGGAAGACAATGCTGGCAAAAGCTGTAGCAACCGAGGCTGGGGCAAACTTT-AT 3133
||||| |||||||| ||||||||||| || |||||||| |||||||| ||||| ||| ||
Sbjct 3146 GGTACTGGGAAGACGATGCTGGCAAAGGCAGTAGCAACTGAGGCTGGCGCAAA-TTTCAT 3204
Query 3134 CAATATTTCAATGTCCAGCATTACTTCAAAGTGGTTTGGTGAGGGAGAGAAGTACGTTAA 3193
|||||| |||||||| ||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 3205 CAATATCTCAATGTCTAGCATCACTTCGAAGTGGTTTGGTGAGGGAGAGAAGTACGTTAA 3264
Query 3194 AGCTGTTTTCTCTTTAGCAAGTAAGATAGCTCCAAGCGTCATTTTTGTTGATGAGGTTGA 3253
|||||| ||||| ||||| || ||||| || || || |||||||||||||||||||||||
Sbjct 3265 AGCTGTCTTCTCCTTAGCGAGCAAGATTGCGCCCAGTGTCATTTTTGTTGATGAGGTTGA 3324
Query 3254 TAGCATGCTGGGAAGACGTGAGAATCCAGGAGAACATGAAGCTATGCGTAAGATGAAGAA 3313
||||||| |||| |||||||| ||||| || |||||||||||||||||||||||||||||
Sbjct 3325 TAGCATGTTGGGTAGACGTGAAAATCCTGGGGAACATGAAGCTATGCGTAAGATGAAGAA 3384
Query 3314 CGAATTCATGATAAACTGGGACGGCTTACGCACAAAGGATAAAGAAAGGGTTTTAGTATT 3373
|||||||||||||||||||||||| ||||| |||||||||| |||| ||||| | ||| |
Sbjct 3385 CGAATTCATGATAAACTGGGACGGTTTACGAACAAAGGATAGAGAACGGGTTCTGGTACT 3444
Query 3374 GGCTGCTACCAACAGACCATTTGACCTTGACGAAGCAGTAATTAGACGGCTTCCCCGAAG 3433
||||| ||||||||||||||||| || |||||||| || |||||||||||||| || ||
Sbjct 3445 CGCTGCCACCAACAGACCATTTGATCTAGACGAAGCTGTTATTAGACGGCTTCCTCGGAG 3504
Query 3434 GTTGATGGTTAATCTGCCGGATTCAGCAAACAGATCGAAGATCTTGAGCGTGATTTTGGC 3493
|||||||||||||| || ||| || | |||||||| ||||| |||||||| ||| | ||
Sbjct 3505 ATTGATGGTTAATCTTCCAGATGCAACGAACAGATCAAAGATTTTGAGCGTCATTCTAGC 3564
Query 3494 GAAAGAAGAGATGGCAGAAGACGTAGACTTAGAAGCAATAGCAAATATGACAGATGGGTA 3553
|||||||| || ||| |||||| || |||||||| |||||||||||||||||||||||
Sbjct 3565 AAAAGAAGAAATAGCACCAGACGTTGATTTAGAAGCTATAGCAAATATGACAGATGGGTA 3624
Query 3554 CTCAGGGAGTGACTTAAAGAATCTTTGCGTGACCGCGGCACATCTTCCTATCCGAGAGAT 3613
|||||| ||||||||||||||||| || |||||||| ||||||||||| |||||||| ||
Sbjct 3625 CTCAGGAAGTGACTTAAAGAATCTGTGTGTGACCGCAGCACATCTTCCAATCCGAGAAAT 3684
Query 3614 TCTTGAAAAAGAAAAGAAGGAGAGAAGTGTGGCTCAAGCCGAAAACCGAGCAATGCCAC- 3672
|| || |||||||||||||||| || ||| ||||| || || ||||| | | || |
Sbjct 3685 ACTGGAGAAAGAAAAGAAGGAGAAAACTGTAGCTCAGGCTGAGAACCGTCCCACACCGCC 3744
Query 3673 AGCTATATAGCAGTACAGACGTTAGACCCTTGAACA-TGAATGATTTCAAAACCGCACAT 3731
| || |||||| | ||||| || | ||| ||| || |||| |||||||| | || |||
Sbjct 3745 A-CTGTATAGCTGCACAGATGTCCGTCCCCTGA-CAATGAACGATTTCAAGGCTGCCCAT 3802
Query 3732 GATCAGGTATGTGCGAGTGTGGCGTCTGATTCATCGAACATGAATGAGCTCCAGCAATGG 3791
||||||||||| || ||||| | || || |||||||||||||||||||| |||||||||
Sbjct 3803 GATCAGGTATGCGCAAGTGTTTCTTCAGACTCATCGAACATGAATGAGCTTCAGCAATGG 3862
Query 3792 AACGAGCTCTATGGAGAAGGAGGCTCGAGGAAGAAGACATCACTGAGTTACTTCATGTA- 3850
|||||||| ||||| |||||||| |||||||||||||| || |||| |||||||||||
Sbjct 3863 AACGAGCTGTATGGTGAAGGAGGATCGAGGAAGAAGACGTCGTTGAGCTACTTCATGTAG 3922
Query 3851 AAGAGA-AAACA-GAGAG 3866
|||||| ||| | |||||
Sbjct 3923 AAGAGACAAAAAAGAGAG 3940
> Ahg337067 jgi|Araly1|337067|fgenesh1_pg.C_scaffold_1003632
Length=1854
Score = 414 bits (224), Expect = 2e-114
Identities = 436/533 (82%), Gaps = 35/533 (7%)
Strand=Plus/Plus
Query 1857 TCAACTGCAACCTCTAAAAGTTACACCTTCAAAGCAGGTGATCGAGTAAGGTTTTTAGGC 1916
||||| |||||||||||||||||||||| ||| ||||||||||||| || || | |
Sbjct 838 TCAACCACAACCTCTAAAAGTTACACCTTTAAAACAGGTGATCGAGT--GG-AGTTCGTC 894
Query 1917 CCTTCAAC-TTCTTC-TCTTGCTTCTCTCCGAGC-T-C--CACCTAGG-GGACCGGCAAC 1969
||| || | || | | |||||||| |||| | | | || |||| || ||| |
Sbjct 895 TTTTC-ACGTACTGCAT-TTGCTTCTTTCCG-TCTTGCAAAACTTAGGTGG-CCGACTTT 950
Query 1970 AGGTTTTCAA-GGAAAAGTACTCCTTGCGTTTGAAGGCAATGGATCTTCAAAAATCGGGG 2028
||| |||||| ||||||||| ||||||| ||||||| ||||| |||||||||| ||||||
Sbjct 951 AGG-TTTCAAGGGAAAAGTAATCCTTGCATTTGAAGACAATGAATCTTCAAAACTCGGGG 1009
Query 2029 TTAGATTTGATAGATCGATACCAGATGGCAATGATCTT-GGTGGTCTATGCGAAGAAGAC 2087
||||||||||||| ||||| | ||||||||||| ||| ||||||||||| ||| |||||
Sbjct 1010 TTAGATTTGATAGGCCGATAGCTGATGGCAATGA-CTTAGGTGGTCTATGTGAAAAAGAC 1068
Query 2088 CATGGttttttttGTACTGCGAGTT--C-T--CTTCG---G---TT---A-GAAAGTTCT 2132
|||||||| |||||| | ||||||| | | ||| | | || | || ||||||
Sbjct 1069 CATGGTTTCTTTTGTGCAGCGAGTTCACTTCGCTTAGATAGTTCTTCCAATGACAGTTCT 1128
Query 2133 TCCAGTGACGATGCTGATAAACTTGCCATTAATGAAATCTTTGAGGTAGCTTT-TAATGA 2191
|||| ||||||||| |||||||||||||||||||||||||||||||| | ||| ||||||
Sbjct 1129 TCCAATGACGATGCAGATAAACTTGCCATTAATGAAATCTTTGAGGT-GGTTTCTAATGA 1187
Query 2192 AAGTGAAAGAGGGTCATTGATATTGTTCCTCAAAGACATTGAGAAATCTGTGTCGGGGAA 2251
|||||||| | | |||||||||||| | || |||||||||| |||||||| ||||||||
Sbjct 1188 AAGTGAAACAAGTTCATTGATATTGATGCTGAAAGACATTGGGAAATCTGAATCGGGGAA 1247
Query 2252 CACTGATGTGTATATAACTTTGAAGAGCAAGCTTGAGAATTTACCGGAGAATATTGTTGT 2311
|||||| ||||| | ||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1248 CACTGAACTGTATTTTACTTTGAAGAGCAAGCTTGAGAATTTACCGGAGAATACTGTTGT 1307
Query 2312 CATAGCTTCGCAAACCCAGTTGGACAACCGAAAGGAAAAATCCCACCCTGGAG 2364
|||||| || |||||||| || |||| || | |||| |||||||| |||||||
Sbjct 1308 CATAGCCTCACAAACCCAATTAGACAGCCCAGAGGAGAAATCCCAACCTGGAG 1360
Score = 355 bits (192), Expect = 1e-96
Identities = 306/362 (85%), Gaps = 4/362 (1%)
Strand=Plus/Plus
Query 1354 CTAGACGTCAAGCGCATAAGGATAGTCTGCGAGGAGGAATACTCAATCCTCAGGACATAG 1413
||||||| ||||| |||| |||| | |||||| | | |||||||||||||||||||||
Sbjct 455 CTAGACGCCAAGCACATACGGATTCTTTGCGAGCAAGCGTACTCAATCCTCAGGACATAG 514
Query 1414 AAGTTTCTTTTGAGAACTTCCCATATTTCTTAAGTGGCACAACTAAGGATGTTTTGATGA 1473
|| ||||||||||||||||||||||||||||||||| |||||||||||||| |||||| |
Sbjct 515 AATTTTCTTTTGAGAACTTCCCATATTTCTTAAGTGACACAACTAAGGATGATTTGATAA 574
Query 1474 TATCCACATATGCCCATATAAAGTATGGAAAGG-AA-TATGCAGAGTATGCATCAGATTT 1531
||| |||| ||||| | | |||| ||| ||| || | |||| | |||| | || | |
Sbjct 575 CATCAACATTTGCCCGTCTGAAGTTTGG--AGGCAAGTTTGCAAATTATGGACCAAAGCT 632
Query 1532 GCCAACAGCGTGTCCCCGTATCTTACTCTCTGGACCATCTGGCTCTGAGATATATCAGGA 1591
| | ||| |||||||||||| | |||||||||||| |||||||||||||||||| |||
Sbjct 633 GTCGACAATATGTCCCCGTATCCTGCTCTCTGGACCAGCTGGCTCTGAGATATATCGGGA 692
Query 1592 AATGTTAGCAAAAGCGCTTGCGAAACAATGTGGGGCCAAATTGATGATTGTTGACTCTCT 1651
| | ||||||||||||||||||||||| | ||||||||||||||||||||||||| | ||
Sbjct 693 AGTCTTAGCAAAAGCGCTTGCGAAACATTATGGGGCCAAATTGATGATTGTTGACACACT 752
Query 1652 CTTGTTACCTGGGGGTTCAACACCCAAGGAAGCAGATACTACCAAAGAAAGTTCTAGGCG 1711
||| ||||||||||| |||||| |||||||||||||| | |||||||||||| ||| ||
Sbjct 753 CTTATTACCTGGGGGATCAACATCCAAGGAAGCAGATTCGACCAAAGAAAGTGATAGCCG 812
Query 1712 TG 1713
||
Sbjct 813 TG 814
Score = 204 bits (110), Expect = 5e-51
Identities = 279/357 (78%), Gaps = 26/357 (7%)
Strand=Plus/Plus
Query 469 CTAAGGCTCCTTGGGCCAAGCTTCTTTCTCAGTTTCCTCAGA-ACCCTCATCT-TGTCAT 526
||||| ||||||||| |||||| ||||||||| ||| ||| | |||||| | ||||||
Sbjct 86 CTAAGTTTCCTTGGGCTAAGCTTATTTCTCAGTATCCAGAGAGA-CCTCAT-TGTGTCAT 143
Query 527 GAGAGGCTCTGTGTTTACTGTTGGACGGCGA-GCCTGCGATTTA-TGTATCAGAGATC-A 583
| | || ||||||||||||||||| || | | ||||||||| | |||| ||||| |
Sbjct 144 CACAAGCGCTGTGTTTACTGTTGGA-AGCCATGAATGCGATTTACT-TATCCCAGATCTA 201
Query 584 TTC-T-ATGCCCAATGTTCTATGTGAACT-A-----AGGCAG-TCTGAGCACGGAGGTCC 634
||| | || ||| ||||| |||||||| | | | || | ||| ||||||||||
Sbjct 202 TTCATCATCCCCGGCGTTCTGTGTGAACTGACGCTGATGAAGCACCGAG-ACGGAGGTCC 260
Query 635 ATCAGTT-GCATCGCTGGAGATAATAGGGAATGGAG-T--ACTTGTTCAGGTCAATGGCA 690
|||||| || | || |||||| ||||| ||||| | | |||| ||||||| |||
Sbjct 261 TTCAGTTCCCA-CCCTTCAGATAAAAGGGAGTGGAGTTGGTCCTGTTGTGGTCAATCGCA 319
Query 691 AGATTTACC-AAAGGAGTACTTGTGTTCATCTACGGGGTGGCGATGAAATTATCTTCACC 749
|| ||||| |||||| |||||||||| |||| | |||||||||||| || |||||| |
Sbjct 320 AGCCTTACCTAAAGGA-TACTTGTGTTGATCTGCAGGGTGGCGATGAGGTTGTCTTCAGC 378
Query 750 ACCCCTGGGAAACATGCTTATATATTTCAGCCTCTTAAAGATGAAAATCTAGCTGCT 806
|||||| |||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct 379 ACCCCTTGGAAACATGCTTATATATTTCAGCCTCTGAAATATGAAAATCTTTCTGCT 435
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 156188279592
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5