BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G03050.1
Length=1981
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470282 jgi|Araly1|470282|fgenesh2_kg.1__236__AT1G03050.1 3151 0.0
Ahg943462 jgi|Araly1|943462|scaffold_604006.1 811 0.0
> Ahg470282 jgi|Araly1|470282|fgenesh2_kg.1__236__AT1G03050.1
Length=1974
Score = 3151 bits (1706), Expect = 0.0
Identities = 1891/1980 (96%), Gaps = 13/1980 (1%)
Strand=Plus/Plus
Query 1 ATGGGTTCGAGTAAGTTTAAACGAGCCATAGGAGCCGTAAAGGACCAAACCAGCGTCGGT 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1 ATGGGTTCGAGTAAGTTTAAACGAGCCATAGGAGCCGTAAAGGACCAAACAAGCGTCGGT 60
Query 61 CTAGCCAAAGTCAATGGTCGAAGCGCTTCTTTATCTGAACTTGACGTAGCCATCGTCAAA 120
|||||||||||||| ||||||||||||||||| || ||||||||||||||||||||||||
Sbjct 61 CTAGCCAAAGTCAACGGTCGAAGCGCTTCTTTGTCAGAACTTGACGTAGCCATCGTCAAA 120
Query 121 GCCACTCGTCACGAAGAGTTTCCAGCAGAAGAGAAATACATTAGAGAGATTCTTAGCCTA 180
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 121 GCGACTCGTCACGAAGAGTTTCCAGCAGAAGAGAAATACATAAGAGAGATTCTTAGCCTA 180
Query 181 ACTTCTTACTCACGCAGTTACATCAACGCTTGCGTTAGCACGCTTTCGAGACGCCTTAAT 240
||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct 181 ACTTCTTACTCACGCAGTTACATCAACGCTTGCGTTAACACGCTTTCGAGACGTCTTAAC 240
Query 241 AAAACCAAATGCTGGACCGTTGCCCTCAAAACCTTGATTTTGATCCAAAGGCTCTTAGGA 300
||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 241 AAAACCAAATGCTGGACCGTTGCTCTCAAAACCTTGATTTTGATCCAGCGGCTCTTAGGA 300
Query 301 GAAGGAGATCAAGCCTACGAGCAAGAGATCTTCTTCGCCACTCGCCGTGGAACAAGGCTT 360
||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||
Sbjct 301 GAAGGAGATCAAGCCTATGAGCAAGAGATCTTCTTCGCCACTCGCCGCGGAACCAGGCTT 360
Query 361 CTCAATATGTCTGATTTTAGGGATGTTTCGAGGTCTAATTCTTGGGACTACTCTGCGTTT 420
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 361 CTCAATATGTCTGATTTTAGGGATGTTTCGAGGTCGAATTCTTGGGACTACTCTGCGTTT 420
Query 421 GTCAGGACTTACGCATTGTACCTTGACGAAAGGCTTGATTTCAGGATGCAAGCGAGACAC 480
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 421 GTCAGGACTTACGCGTTGTACCTTGACGAAAGGCTTGATTTCAGGATGCAAGCAAGACAT 480
Query 481 GGGAAACGTGGAGTTTACTGCGTTGGAGGAGAAGCTGACGAAGAAGAACAGGATCAAGCT 540
|||||||||||||||||||||||||||||||||||||| |||| |||||| ||||||||
Sbjct 481 GGGAAACGTGGAGTTTACTGCGTTGGAGGAGAAGCTGAAGAAGGAGAACAAGATCAAGCC 540
Query 541 GCGGCAGATCTCTCCACGGCTATCGTGGTCAGGTCACAACCGATCGCCGAGATGAAAACA 600
|| || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 541 GCTGCTGATCTCTCCACGGCTATCGTGGTCAGGTCACAACCAATCGCCGAGATGAAAACA 600
Query 601 GAGCAGATTTTCATCAGAATCCAACATTTGCAGCAACTTCTTGACCGTTTCTTGGCTTGT 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 GAGCAGATTTTCATCAGAATCCAACATTTGCAGCAACTTCTTGACCGTTTCTTGGCTTGT 660
Query 661 CGCCCAACAGGTAATGCGAGGAACAACAGAGTTGTGATTGTGGCTCTGTATCCGATAGTG 720
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 661 CGTCCAACAGGTAATGCGAGGAACAACAGAGTGGTGATTGTGGCTCTGTATCCGATAGTA 720
Query 721 AAGGAGAGTTTTCAGATATATTACGATGTAACAGAGATAATGGGGATTTTGATTGAACGA 780
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 721 AAAGAGAGTTTTCAGATATATTACGATGTAACAGAGATAATGGGGATTTTGATTGATCGA 780
Query 781 TTCATGGAGTTAGATATTCCTGATTCGATCAAGGTCTATGACATTTTCTGCCGGGTCTCG 840
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct 781 TTCATGGAGTTAGATATTCCTGATTCGATCAAGGTCTACGACATTTTCTGTCGGGTCTCG 840
Query 841 AAACAATTCGAAGAGCTCGATCAGTTCTACTCTTGGTGTAAGAACATGGGGATCGCACGG 900
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 841 AAACAATTCGAAGAGCTCGATCAGTTCTACTCTTGGTGTAAGAACATGGGGATTGCACGG 900
Query 901 TCTTCTGAGTATCCAGAGATAGAGAAGATCACACAGAAGAAGCTTGATCTCATGGATGAG 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 TCTTCTGAGTATCCAGAGATAGAGAAGATCACACAGAAGAAGCTTGATCTCATGGATGAG 960
Query 961 TTTATAAGAGACAAATCTGCTTTAGAACACACCAAGCAATCAAAATCTGTTAAATCTGAA 1020
||||||||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||
Sbjct 961 TTTATAAGAGACAAATCTGCTCTAGAACAGACCAAGCAATCAAAATCTGTTAACTCTGAA 1020
Query 1021 GCCGATGAAGATGATGATGAAGCGAGAACAGAGGAAGTAAATGAAGAGCAAGAAGATATG 1080
||||||||||| || ||||| || ||||||| |||||||||||||||||||||||| |||
Sbjct 1021 GCCGATGAAGAAGAAGATGATGCAAGAACAGCGGAAGTAAATGAAGAGCAAGAAGACATG 1080
Query 1081 AACGCAATAAAGGCCTTACCTGAACCTCCACCAAAAGAAGAAGATGACGTAAAACCTGAG 1140
|| ||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||
Sbjct 1081 AATGCAATCAAGGCCTTACCTGAACCTCCACCAAAAGAAGAAGAAGACGAAAAACCTGAG 1140
Query 1141 GAAGAAGCAAAGGAAGAAGTGATCATAGAGAAGAAACAAGAAGAAATGGGTGATTTACTT 1200
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GAAGAAGCAAAGGAAGAAGTGATCATAGAGAAGAAACAAGAAGAAATGGGTGATTTACTG 1200
Query 1201 GATCTTGGGAATACAAACGGCGGTGAAGCAGGACAAGCTGGAGATAGCTTAGCGTTGGCT 1260
||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct 1201 GATCTTGGGAATACAAACGGCGGTGAAGCAGCACAAGCTGGAGATAGCTTAGCATTGGCT 1260
Query 1261 TTATTTGACGGGCCATACGCAAGCGGTTCTGGTTCAGAGTCTGGTCCAGGATGGGAAGCG 1320
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1261 TTATTTGACGGGCCATACGCGAGCGGTTCTGGTTCAGAGTCTGGTCCAGGATGGGAAGCG 1320
Query 1321 TTTAAGGATGATTCTGCGGATTGGGAAACAGCTTTGGTGCAAACAGCTACAAACTTGTCA 1380
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 TTTAAGGATGATTCGGCCGATTGGGAAACAGCTTTGGTGCAAACAGCTACAAACTTGTCG 1380
Query 1381 GGACAAAAGTCAGAACTCGGAGGAGGCTTTGATATGTTGTTGCTTAACGGAATGTATCAG 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GGACAAAAGTCAGAACTCGGAGGAGGCTTTGATATGTTGTTGCTTAACGGAATGTATCAG 1440
Query 1441 CACGGCGCTGTAAACGCTGCCGTGAAAACATCGACGGCTTATGGAGCCAGCGGAAGCGCG 1500
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1441 CACGGTGCTGTAAACGCTGCTGTGAAAACATCGACGGCTTATGGTGCCAGCGGAAGCGCG 1500
Query 1501 AGCAGTATGGCATTTGGTTCTGCAGGAAGACCAGCAGCAACTATGCTGGCACTTCCAGCA 1560
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1501 AGCAGTATGGCATTTGGTTCTGCAGGAAGACCAGCAGCAACTATGTTGGCACTTCCAGCA 1560
Query 1561 CCATCAACGGCTAATGGAAAC-GCCGGAAACATTAACAGTCCGGTTCCCATGGATCCATT 1619
||| ||| ||||||||||||| || ||||||| |||||| ||||||||||||||||||||
Sbjct 1561 CCAGCAATGGCTAATGGAAACAGC-GGAAACAATAACAGCCCGGTTCCCATGGATCCATT 1619
Query 1620 TGCAGCGTCATTGGAGGTTGCGCCGCCAGCATATGTGCAGATGAATGATATGGAGAAGAA 1679
|||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct 1620 TGCAGCGTCATTGGAGGTTGCGCCGCCACCATATGTGCAGATGAATGATATGGAAAAGAA 1679
Query 1680 ACAGAGGATGTTGATGGAAGAACAGATGATGTGGGATCAATACTCTAGAGACGGAAGACA 1739
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 1680 ACAGAGGATGTTGATGGAAGAACAGATAATGTGGGATCAATACTCTAGAGAAGGAAGACA 1739
Query 1740 AGGACATATGAATCTAAGGCAAAACCAAAACCAACCTTACTCTTACACACCTCAATATTG 1799
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1740 AGGACACATGAATCTAAGGCAAAACCAAAACCAACCTTACTCTTACACACCTCAATATTG 1799
Query 1800 ATTGTGCCCCATAGAAGAAGCTCTCCTTGAGTTGTGACAGCTTTTTTG-TT--GTCTACC 1856
||||||| |||||||||||||||||||||||||||| ||| ||||||| || |||||||
Sbjct 1800 ATTGTGCGCCATAGAAGAAGCTCTCCTTGAGTTGTGTCAG-TTTTTTGGTTTTGTCTACC 1858
Query 1857 AAACAGTTTGGTCTAATAGATCTACTAATCTTTTTGCAAATTTCtt--tttttt-GTTCT 1913
|| ||||||||||| |||||||||||||||||||||||| ||| || |||||| |||||
Sbjct 1859 AATCAGTTTGGTCTTATAGATCTACTAATCTTTTTGCAATTTTTTTAATTTTTTTGTTCT 1918
Query 1914 TGGGTCAAATATTCATTTGAGGCATTTGTGAGGTTTGCTTCTGTAATTGTAATCTCTGGT 1973
||| |||||| | |||| | |||||||||||||||||||||||||||||||| ||||||
Sbjct 1919 TGG-TCAAAT-T-CATTGG-GGCATTTGTGAGGTTTGCTTCTGTAATTGTAAGATCTGGT 1974
> Ahg943462 jgi|Araly1|943462|scaffold_604006.1
Length=1852
Score = 811 bits (439), Expect = 0.0
Identities = 1393/1835 (76%), Gaps = 140/1835 (8%)
Strand=Plus/Plus
Query 1 ATGGGTTCGAGTAAGTTTAAACGAGCCATAGGAGCCGT-AAAGGACCAAACCAGCGTCGG 59
|||||||| |||||| | ||||| || ||||||||||| ||| || ||||| ||||| ||
Sbjct 21 ATGGGTTCAAGTAAGCTAAAACGTGCAATAGGAGCCGTGAAA-GATCAAACAAGCGTAGG 79
Query 60 -TCTAGCCAAAGTC-AATGGTCGAAGC-GCTTCTTTATCTGAACTTGACGTAGCCATCGT 116
| ||||||||||| | ||||||||| | ||||||| | |||||||| ||||| ||||
Sbjct 80 AT-TAGCCAAAGTCGGA-GGTCGAAGCAG-TTCTTTAACGGAACTTGAAGTAGCTGTCGT 136
Query 117 CAAAGCCACTCGTCACGAAGAGTTTCCAGCAGAAGAGAAATACATTAGAGAGATTCTT-A 175
||||| || | ||||| || | |||||| || ||||||||||| ||||||| |||| |
Sbjct 137 GAAAGCAACAAGACACGATGAATATCCAGCGGAGGAGAAATACATCAGAGAGA-TCTTAA 195
Query 176 GCCTAACTTCTTACTCACGCAGTTACATCAA-CGCTTGCGTTAGC-ACGCTTTCGAGACG 233
|||||||||| |||||||||| ||| | || |||||| || | | | || ||||||||
Sbjct 196 GCCTAACTTCATACTCACGCAACTACGT-AAGCGCTTGTGTGA-CAATTCTCTCGAGACG 253
Query 234 CCTTAATAAAACCAA-ATGCTGGACCGTTGCCCTCAAAACCTTGATTTTGATCCAAAGGC 292
|| || || ||||| | |||| | ||||| |||||||||||||||||||||||| ||
Sbjct 254 GCTCAACAAGACCAAGA-ACTGGTCGGTTGCTCTCAAAACCTTGATTTTGATCCAACGGT 312
Query 293 T-CTTAGGAGAAGGAGATCAAGCCTACGAGCAAGAGATCTTCTTCGCCACTCGCCGTGGA 351
| | || ||| || |||| |||||||||||||||||| |||||||| || | || |||
Sbjct 313 TGC-TAACAGATGGCGATCGAGCCTACGAGCAAGAGATATTCTTCGCGACGAGACGAGGA 371
Query 352 ACAAGGCTT-CTCAATATGTCTGATTTTAGGGAT--GTTTCGAGGTCTAATTCTTGGGAC 408
|| | | || || || ||||||||||| || ||| | || | |||| |||| |||||
Sbjct 372 ACGA-GATTGCTTAACATGTCTGATTTCAGAGATGCGAGTC-A-GTCTGATTCGTGGGAT 428
Query 409 TACTCTGCGTTTG-TCAGGACTTACGCATTGTACCTT-GACGAAAGGCTTGATTTCAGGA 466
|||||||| |||| || ||||||| || ||||| || || ||| | ||||||| | |||
Sbjct 429 TACTCTGCTTTTGTTC-GGACTTATGCTTTGTA-TTTGGATGAACGTCTTGATTACCGGA 486
Query 467 TGCAAGCG-A-GACACGGGAAA--C-GTGGAGTTTACT-GCG-TTGGAGGAGAAGCTGAC 519
|||||| | | || | |||||| | |||| | | | | | | || || | || ||
Sbjct 487 TGCAAG-GAAGGAGA-GGGAAACGCAGTGGTGGTGA-TGGTGATT-CCGGCG-AG--GAT 539
Query 520 GAAGAAGAAC-AG-GATCAAGCT-GCGGCAGATCTCTCCACGGCTATCGTGGTCAGGTC- 575
|| || | | || || | || | | || || || | ||||| ||||| | ||
Sbjct 540 GATGATCATCGAGAGA-CCAG-TACCAACA-TTCGGTCAAAAGCTATTGTGGTTAAATCT 596
Query 576 ACAACCGATCGCCGAGATGAAAACAGAGCAGATTTTCATCAGAATCCAACATTTGCAGCA 635
| || || || | ||||||||||||||| | |||||| ||||| | |||||||| || ||
Sbjct 597 A-AAACGGTCACAGAGATGAAAACAGAGAAAATTTTCGTCAGAGTACAACATTTACAACA 655
Query 636 ACTTCTTGACCGTTTCTTGGCTTGTCGCCCAACAGGTAATGCGAGGAACAACAGAGTTGT 695
|||||||| || |||||||||||||| |||||||||||||||| |||||||||||| ||
Sbjct 656 GCTTCTTGATCGGTTCTTGGCTTGTCGTCCAACAGGTAATGCGAAGAACAACAGAGTGGT 715
Query 696 GATTGTGGCTCTGTATCCGATAGTGAAGGAGAGTTTTCAGATATATTACGATGTAACAGA 755
|||||||||| ||||||||||||| || |||||||||||| |||| ||| | |||||||
Sbjct 716 GATTGTGGCTTTGTATCCGATAGTAAAAGAGAGTTTTCAGTTATACTACAACATAACAGA 775
Query 756 GATAATGGGGA-TTTTGATTGAACGATTCATGGAGTTAGATATTCCTGATTCGATCAAGG 814
||| || |||| | || || || ||||||||||| ||||| |||| |||||||||||| |
Sbjct 776 GATCAT-GGGAGTATTAATAGATCGATTCATGGAATTAGACATTCATGATTCGATCAAAG 834
Query 815 TCTATGACATTTTCTGCCGGGTCTCGAAACAATTCGAAGAGCTCGATCAGTTCTACTCTT 874
||||||| || ||||| | || || ||||| || || ||| | |||| ||| ||| |
Sbjct 835 TCTATGAAATCTTCTGTAGAGTTTCTAAACAGTTTGACGAGTTAGATCCGTTTTACGGAT 894
Query 875 GGTGTAAGAACATGGGGA-TCGCACGGTCTTCTGAGTATCCAGAGA-TAGAGAAGATCAC 932
||||||||||||| |||| | ||| | ||||| ||||||||||| | | || ||||||||
Sbjct 895 GGTGTAAGAACAT-GGGAGTTGCAAGATCTTCAGAGTATCCAGA-ATTGGAAAAGATCAC 952
Query 933 ACAGAAGAAGCTTGATCTCATGGATGAGTTTATAAGAGACAAATCTGCTTTAGAACACAC 992
||||||||| ||||||||||||||||||||||||||||| ||||| ||||||| |||
Sbjct 953 ACAGAAGAAACTTGATCTCATGGATGAGTTTATAAGAGATAAATCAGCTTTAGCTG-CAC 1011
Query 993 CAAGCAATCAAAATC-TGTT-AAA----TCTGAAGCCGAT--GAAGATGATGATGAAGCG 1044
|| ||| ||||||| | | ||| ||| || | || || || || || ||| |
Sbjct 1012 -AATCAA-CAAAATCATCATCAAACAAGTCT-AA-CAAATCTGAGGAGGAGGA-GAA-CA 1065
Query 1045 AGAACAGAGGAAGTA-AATGAAGAGCAAGAAGATATGAACGCAAT-AAAGGCCTTACCTG 1102
| |||||||||| | || ||| | ||||||||| | ||| | || |||| | ||||| |
Sbjct 1066 A-AACAGAGGAAATTCAA-GAAAATCAAGAAGATTTAAACTCCATTAAAG-CATTACCAG 1122
Query 1103 AACCTCCAC-C-AA-AAGAAGAAGATGACGTA-AAACCTGAGGAAGAAGCAAAGGAAGAA 1158
||| || | || |||||||||| | | |||| || |||| | ||||||
Sbjct 1123 CACCGAAACACGAAGAAGAAGAAGAAAAAATGGAAACAA-AGAAAGATTCTGAGGAAGTG 1181
Query 1159 GTGATCATAGAGAAGAAACAAGAAGAAATGGGTGATTTACTTGATCTTGGGA-ATACAAA 1217
|| ||| ||| ||| ||||| | || |||||| || ||| || | || ||
Sbjct 1182 GTT-TCA-AGACAAGGT-CAAGA-G----GG-TGATTTGCTGGAT-TTAACAGATG-AAG 1230
Query 1218 CGGCGGTGAA--G-CAGGACAAGCT-GGAGATAGCTTAGCGTTGGCTTTATTTGACGG-G 1272
| ||||||| | ||||| | | | || ||||| || ||||| || |||||||| || |
Sbjct 1231 C--CGGTGAAACGGCAGGA-ACGGTTGGTGATAGTTTGGCGTTAGCATTATTTGATGGAG 1287
Query 1273 CCATA-CGCAAGCGGTTCTGGTTCAGAGTCTGGTCCAGGATGGGAAGCGTTTAAGGATGA 1331
| || | || | | | | || ||||| || || |||||||| ||||| ||| |
Sbjct 1288 CGGTATC-CA--CTGAGA-G-TGCA---TCTGGACCGGGGTGGGAAGCATTTAACGATAA 1339
Query 1332 TTCTGCGGATTGGGAAACAG-CTTTGGTGCAAA-CAGCTACAA-ACTTGTCAGGACAAAA 1388
||| ||||||||||| || | ||| |||| ||| | || || | | ||||| ||||||||
Sbjct 1340 TTCGGCGGATTGGGAGACGGACTT-GGTG-AAATCGGCAACGAGA-TTGTCGGGACAAAA 1396
Query 1389 GTCA-GAACTCGGAGGAGGCTTTGATA-TGTTGTTGCTTAACGGAATGTATCAGCACGGC 1446
| | || || |||||||| ||||||| | ||||||||| | |||||||||||| ||||
Sbjct 1397 GA-ATGAGCTTGGAGGAGGATTTGATACT-TTGTTGCTTGATGGAATGTATCAGTACGGT 1454
Query 1447 GCTGTAAACGCTGCCGTGAAAACATCGACGGCTTATGGA-GCCAGCGGAAGCGCGAGCAG 1505
|| || || ||||| || ||||| || |||||||||||| | || ||||| || || ||
Sbjct 1455 GCGGTTAATGCTGCGGTTAAAACGTCTACGGCTTATGGAAGT-AGTGGAAGTGCAAGTAG 1513
Query 1506 TATGGCATTTGGTTCTGCAGGAAGACCAGCAGCAACTATGCTGGCACTT-CCAGCACCAT 1564
| |||| |||||||||||||||||||||||||| | ||| ||||| || ||||| |||
Sbjct 1514 TGTGGCTTTTGGTTCTGCAGGAAGACCAGCAGCCTCAATGTTGGCA-TTGCCAGCGCCAG 1572
Query 1565 C-AACGGCTAATGGAAACGCCGGAAACATTAACAGTCCGGTTCCCATGGATCCATTTGCA 1623
| ||||| || ||| || | || || || |||||||| |||| ||||||||
Sbjct 1573 CCAACGGA-AACAGAATCG--G-AAGCA--AA-AGTCCGGTAATGGTGGACCCATTTGCG 1625
Query 1624 GCGTCATTGGAGGTTGCGCCGCCAGCATATGTGCAGATGAATGATATGGAGAAGAAACAG 1683
||||| | ||||| || || |||||||| ||||| ||||||||||||||||| |||||
Sbjct 1626 GCGTCGCTAGAGGTAGCCCCACCAGCATACGTGCAAATGAATGATATGGAGAAAAAACAA 1685
Query 1684 AGGAT-GTTGATGGAAGAACAGATGATGTGGGATCAATACT-CTAGAGACGGAAGACAAG 1741
|| || ||| ||||||||||| || ||||||||||| ||| | ||| | ||||||||||
Sbjct 1686 AG-ATTGTTAATGGAAGAACAAATAATGTGGGATCAGTACAAC-AGAAATGGAAGACAAG 1743
Query 1742 GACATATGAATCTAAGG-CAAAACCAA-AACCAAC 1774
| || |||||| | || ||||||||| ||| |||
Sbjct 1744 GTCACATGAATTTC-GGACAAAACCAACAAC-AAC 1776
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 74466428975
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5