BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G04090.1
Length=1965
Score E
Sequences producing significant alignments: (Bits) Value
Ahg333729 jgi|Araly1|333729|fgenesh1_pg.C_scaffold_1000294 2743 0.0
Ahg494605 jgi|Araly1|494605|fgenesh2_kg.8__421__AT5G43950.1 826 0.0
Ahg941373 jgi|Araly1|941373|scaffold_601917.1 84.2 3e-15
> Ahg333729 jgi|Araly1|333729|fgenesh1_pg.C_scaffold_1000294
Length=3987
Score = 2743 bits (1485), Expect = 0.0
Identities = 1658/1744 (95%), Gaps = 2/1744 (0%)
Strand=Plus/Plus
Query 52 GGGTTTCGCGCGATCAGATAAG-A-ATGTTGGGTTACAAATGTCTCCACTGGAACAATCT 109
||||||||| ||||||| ||| | ||||| |||||||||||||||||||||||||||||
Sbjct 2244 GGGTTTCGCAAGATCAGAGAAGAATATGTTAGGTTACAAATGTCTCCACTGGAACAATCT 2303
Query 110 TATAGATTTACCGCCATTAAAGGACCCTGAAACCTTCTCTCTTCCTTCTTCCATTCCCCA 169
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 2304 TATAGATTTACCGCCATTAAAGGACCCTGAAACCTTCTCTCTTCCTGCTTCCATTCCCCA 2363
Query 170 TTGGCCTCCAGGTCAAGGCTTTGGCTCTGGAACAATCAATCTCGGCAAATTACAAGTCAT 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2364 TTGGCCTCCAGGTCAAGGCTTTGGCTCTGGAACAATCAATCTCGGCAAATTACAAGTCAT 2423
Query 230 CAAAATCACGGATTTTGAATTTATATGGAGATACAGATCCACAGAGAAGAAGAAGAACAT 289
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||| |||
Sbjct 2424 CAAAATCACGGATTTTGAATTTATATGGCGATACAGATCCACAGAGAAGAACAAGAGCAT 2483
Query 290 TTCATTTTACAAACCAAAGGGATTGTTACCTAAAGACTTCCATTGCTTAGGTCACTACTG 349
|||||| |||||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct 2484 TTCATTCTACAAACCAAAGGGATTGTTTCCTAAAGACTTCCATTGCTTAGGTCATTACTG 2543
Query 350 TCAGTCTGATTCTCATCCTTTGAGAGGTTATGTACTTGCGGCAAGAGATTTAGTGGATTC 409
||| ||||||||||||||||||||||||||| | |||||||||||||||||||| |||||
Sbjct 2544 TCAATCTGATTCTCATCCTTTGAGAGGTTATCTTCTTGCGGCAAGAGATTTAGTAGATTC 2603
Query 410 ATTAGAACAGGTAGAGAAACCTGCATTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAG 469
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2604 ATTAGAACAGGAAGAGAAACCTGCATTAGTGGAACCTGTTGATTTTACTCTTGTCTGGAG 2663
Query 470 CTCAAATGATTCAGCAGAAAATGAATGTAGTAGTAAGAGCGAATGCGGTTACTTCTGGTT 529
|||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 2664 CTCAAATGATTCAGTAGAAGATGAATGTAGTAGTAAGAGCGAACGCGGTTACTTCTGGTT 2723
Query 530 ACCGCAGCCTCCTGAAGGGTATAGATCGATCGGTTTTGTGGTTACAAAGACTTCCGTGAA 589
|||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||
Sbjct 2724 ACCGCAGCCTCCTGAAGGGTATAGATCGATCGGTTTTGTGGTTACAAAGAGTTCTGTGAA 2783
Query 590 ACCTGAGTTGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATATATGTGAACCCCA 649
||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 2784 ACCTGAGTTGAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATAAATGTGAAACCCA 2843
Query 650 CAATGTCATTGTCACTGCTGTTTCAGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAAC 709
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2844 CAATGTCATTGTCACTGCTGTTTCGGAATCTTTAGGTGTTCCTTTGTTTATATGGAGAAC 2903
Query 710 TCGGCCTTCAGACCGAGGAATGTGGGGCAAAGGTGTCTCTGCAGGTACTTTCTTCTGCAG 769
||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||
Sbjct 2904 TCGGCCTTCAGACCGCGGCATGTGGGGCAGAGGTGTCTCTGCAGGTACTTTCTTCTGCAG 2963
Query 770 AACTCGGCTTGTTGCTGCTAGAGAAGATCTTGGTATCGGTATTGCTTGTCTAAAGAATCT 829
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 2964 AACTCGGCTTGTTCCTGCTAGAGAAGATATTGGTATCGGTATTGCTTGTCTAAAGAATCT 3023
Query 830 AGATTTGAGTTTACATGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTA 889
|||| || | |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3024 AGATACGAATGTACACGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTA 3083
Query 890 TGGTCCTACACTAGTCTTCCATCCTGGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTT 949
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3084 TGGTCCTACACTAGTCTTCCATCCTGGTGAAACTTACTTACCTTCTTCTGTTTCGTGGTT 3143
Query 950 CTTCAAAAATGGTGCAGTTCTCTGCGAAAAGGGAAATCCAATCGAGGAACCTATCGATGA 1009
|||||| |||||||||| ||||||||| ||||||||||| ||||| |||| |||| ||||
Sbjct 3144 CTTCAAGAATGGTGCAGCTCTCTGCGAGAAGGGAAATCCGATCGATGAACTTATCAATGA 3203
Query 1010 AAATGGTTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTTTTGGATTGATTTGCC 1069
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3204 AAATGGCTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAGTTTTGGATTGATTTGCC 3263
Query 1070 GTGTGATGATCAACAAAGAGATTTCGTCAAGCGAGGAAACCTTGAAAGCTCGAAACTTTA 1129
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 3264 GTGTGATGATCAACAAAGAGATTTCGTCAAGCGAGGAAACCTTGAAAGTTCGAAACTTTA 3323
Query 1130 CATTCATATTAAGCCTGCTCTTGGAGGAACGTTCACGGATCTTGTCTTCTGGATCTTCTG 1189
|||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3324 CATTCACATTAAGCCTGCTCTTGGAGGAACGTTCACGGATCTTGTCTACTGGATCTTCTG 3383
Query 1190 TCCATTTAACGGACCAGCAACCTTAAAACTAGGACTCGTCGATATCTCATTGATCAGTAT 1249
||| ||||| |||||||| ||||||||||||||||| |||||| ||||||||||||| ||
Sbjct 3384 TCCTTTTAATGGACCAGCGACCTTAAAACTAGGACTTGTCGATGTCTCATTGATCAGCAT 3443
Query 1250 TGGCCAACACGTCTGCGATTGGGAACATTTCACTCTCCGAATCAGCAATTTCTCTGGTGA 1309
|||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 3444 CGGCCAACACGTCTGTGATTGGGAACATTTCACTCTCCGAATCAGCAATTTCTCAGGTGA 3503
Query 1310 GCTTTACTCAATCTACTTGTCTCAACACAGTGGCGGCGAGTGGATCGAAGCATACGACCT 1369
|||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||
Sbjct 3504 GCTTTACTCAATCTACTTCTCACAACACAGTGGCGGCGAGTGGATCGAAGCTTATGACCT 3563
Query 1370 TGAAATCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCTTCAAAACATGGTCACGCAAG 1429
|||| |||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct 3564 TGAATTCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCGTCGAAACATGGTCACGCGAG 3623
Query 1430 CTTTCCTAGGGCTGGGACTTACTTACAGGGATCGACAATGCTTGGGATTGGGATAAGAAA 1489
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3624 CTTTCCTAAGGCTGGGACTTACTTACAGGGATCGACAATGCTTGGGATTGGGATAAGAAA 3683
Query 1490 TGACACTGCGCGTAGTGAACTCTTGGTAGATTCGAGCTCACGGTACGAGATCATTGCAGC 1549
|||||||| ||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct 3684 CGACACTGCACGTAGTGAAGTCTTCGTAGATTCGAGCTCACGGTACGAGATCATTGCAGC 3743
Query 1550 GGAGTATCTCAGCGGAAACAGTGTGTTGGCAGAACCGCCGTGGTTGCAGTACATGAGAGA 1609
|||||||| |||| ||| ||||| ||||||||||||| ||| ||||||| ||||||||
Sbjct 3744 AGAGTATCTGGGCGGCAACGGTGTGGTGGCAGAACCGCCATGGCTGCAGTATATGAGAGA 3803
Query 1610 ATGGGGACCAAAGGTTGTGTACGATTCAAGAGAGGAGATAGAGAGATTGGTGAATCGATT 1669
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 3804 ATGGGGACCAAAGGTTGTCTACGATTCAAGAGAGGAGATAGAAAGATTGGTGAATCGATT 3863
Query 1670 TCCGAGGACGGTTAGGGTTTCGCTTGCCACAGTGCTTAGAAAACTTCCGGTGGAATTATC 1729
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 3864 TCCGAGGACGGTTAGGGTTTCGCTTGCTACAGTGCTGAGAAAACTTCCGGTGGAATTATC 3923
Query 1730 CGGCGAGGAAGGTCCTACAGGACCAAAGGAGAAGAACAATTGGTATGGCGATGAAAGATG 1789
||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||
Sbjct 3924 CGGCGAGGAAGGTCCAACGGGACCGAAGGAGAAGAACAATTGGTATGGCGATGAAAGATG 3983
Query 1790 TTGA 1793
|||
Sbjct 3984 GTGA 3987
> Ahg494605 jgi|Araly1|494605|fgenesh2_kg.8__421__AT5G43950.1
Length=1898
Score = 826 bits (447), Expect = 0.0
Identities = 1357/1778 (76%), Gaps = 136/1778 (8%)
Strand=Plus/Plus
Query 73 GAATGTTGGGTTACAAATGTCTCCACTGGAACAATCTTATAGATTTACCGCCATTAAAGG 132
||||||| || | ||||||||| | ||||||||||| | ||| ||||| ||||| ||||
Sbjct 41 GAATGTTTGGATGCAAATGTCTGTATTGGAACAATCTCAGAGAATTACCTCCATTGAAGG 100
Query 133 ACCCTGAAACCTTCTCTCTTCCTTCTTCCATTCCCCATTGGCCTCCAGGTCAAGGCTTTG 192
| ||||||||||||||||| ||| |||| |||||||| |||||| |||||||||||||||
Sbjct 101 AACCTGAAACCTTCTCTCTCCCTGCTTCTATTCCCCAGTGGCCTTCAGGTCAAGGCTTTG 160
Query 193 GCTCTGGAACAATCAATCTCGGCAAATTACAAGTCATCAAAATCACGGA-TTTTGAATTT 251
| || |||| ||||||||| || | ||| || || | | |||| | ||||||||||
Sbjct 161 GTTCAGGAAGAATCAATCTTGGTGATTTAGAACTCGCCGAGGTCAC-AAGTTTTGAATTT 219
Query 252 ATATGGAGATACAGATC-C-AC-AGAGAAGAAGAAGAACATTTCATTTTACAAACCAAAG 308
||||| ||||| | || | | ||| || ||||||| |||| || ||||||||
Sbjct 220 GTATGGCGATACTGCTCTCGTCGAGACAACAAGAAGAGTGTTTCCTTCTACAAACC---- 275
Query 309 GGA-TTGTTACCT-AAAGACTTCCATTGCTTAGGTCACTACTGTCAGTCTGATTCTCATC 366
||| ||| || |||| |||||||| |||||||| |||||||||||||||||||||
Sbjct 276 GGACAAATTA-CTCGAAGATTTCCATTGTTTAGGTCATTACTGTCAGTCTGATTCTCAT- 333
Query 367 CT-TTGAGAGGTTAT-GTACTTGCGGCAAGA-GATTTAGTGGATTCATTAGAACAGGTAG 423
|| |||||||||| | | |||| |||||| | ||| | | || || | ||
Sbjct 334 CTCTTGAGAGGTT-TCCTTCTTGTAGCAAGACAAGTTAAT-AAGTC-TT----C----AG 382
Query 424 AGAAACCTGCA-TTAGTGGAACCTGTTGATTTTACTCTT-GTCTGGAGCTCAAATGA-TT 480
|| |||||| || ||| |||| |||||| ||| || ||||||||||||||||| ||
Sbjct 383 AG---CCTGCACTT-GTGCAACCACTTGATTATAC-ATTGGTCTGGAGCTCAAATGACTT 437
Query 481 CAGCAGAAAATGAATGTAGTAGTAAGAGCGAATGCGGTTACTTCTGGTTACCGCAGCCTC 540
| ||| || | | | | | | || |||||||||||||| ||||||||||||
Sbjct 438 -ATCAG--AA-G---G-A-T-CT-----C-AAAGCGGTTACTTCTGGCTACCGCAGCCTC 481
Query 541 CTGAAGGGTATAGATCGATCGG-TTTTGTGGTTACAAAGACTTCCGT-GAAACCTGAGTT 598
|| ||||||||| | ||||||| |||| ||||||||| || ||| | |||||| || ||
Sbjct 482 CTCAAGGGTATAAAACGATCGGATTTT-TGGTTACAACGA-GTCCCTCGAAACCAGAATT 539
Query 599 GAATGAAGTTAGATGTGTTAGAGCTGATCTTACTGATATATGTGAACCCCACAATGTCAT 658
| || |||||||||| ||| |||||||||| || |||| ||||||| | || || |||||
Sbjct 540 GGATCAAGTTAGATGCGTTCGAGCTGATCTAACCGATAAATGTGAAGCACATAAAGTCAT 599
Query 659 TGTCACTGCTGTTTCAGAA-TCTTTAGGTGTTCCTTTGTTTATATGG-AGAACTCGGCCT 716
|||||||| | || ||| |||||| | ||||||||||||||||| | ||| | |||
Sbjct 600 CATCACTGCTATATC-GAATTCTTTAAGCATTCCTTTGTTTATATGGCA-AACAAGACCT 657
Query 717 TCAGACCGAGGAATGTGGGGCAAAGGTGTCTCTGCAGGTACTTTCTTCTGCAGAACTCGG 776
|| ||||| ||||||||||||||||| ||| | ||||||| |||||||||| |||||
Sbjct 658 TCCGACCGCGGAATGTGGGGCAAAGGAGTCCCAACAGGTACATTCTTCTGCACAACTC-- 715
Query 777 CTTGTTGCTGCTAGAGAAGATC-T-T-GGTATCGGTATTGCTTGTCTAAAGAATCTAGAT 833
| ||| | |||||||| | | ||| | || || |||||||| || || |||
Sbjct 716 AAT-CCCCTG--A-AGAAGATCATCTCAGTA-C--AATCGCGTGTCTAAAAAACCTCGAT 768
Query 834 TTGAGTTTACATGCGATGCCAAATGTTGATCAGATTCAAGCTTTGATTCAACACTATGGT 893
| ||||||||| || |||||||| ||||||| || || |||||||||||||||||||||
Sbjct 769 TCGAGTTTACACGCAATGCCAAACATTGATCAAATCCATGCTTTGATTCAACACTATGGT 828
Query 894 CCTACACTAGT-CTTCCATCCTGGTGAAACT-TACT-TACCTTCTTCTGTTTCGTGGTTC 950
|| | | | | |||||||||| || || | || | || ||||||| || || ||||||
Sbjct 829 CCAAGAGT-TTACTTCCATCCTAATG-AAGTCTA-TCTATCTTCTTCCGTCTCATGGTTC 885
Query 951 TTCAAAAATGGTGCAGTTC-TCTGCGA-AAAGGGAAA-T-C-C--A-ATCGAGGAACCTA 1002
|||||||| ||||||| || | ||| | || ||| | | | | ||| | ||||| |
Sbjct 886 TTCAAAAACGGTGCAG-TCTTATGC-AGCAACTCAAATTCCTCTGATATCAATGAACCCA 943
Query 1003 TCGATGAAAATGGTTCGAATTTGCCTCAAGGAGGAAGCAATGACAAGCAG-TTTTGGATT 1061
| || |||| || |||||| | ||||| || |||| ||| || |||| | | ||||||
Sbjct 944 TAGACGAAACCGGCTCGAATCTACCTCATGGCGGAACCAACGATAAGC-GATATTGGATC 1002
Query 1062 GATTTGCCGTGT-GATGATCAACAAAGA---GATTTCGTCAAGCGAGGAAACCTTGAAAG 1117
||||| ||| | | |||||||||||| || ||| |||| ||||| || || |||||
Sbjct 1003 GATTTACCG-ATAAACGATCAACAAAGACGCGAATTCCTCAAACGAGGCAATCTCGAAAG 1061
Query 1118 CTCGAAACTTTACATTCATATTAAGCCTGC-TCTTGGAGGAACGTTCACGGATCTTGTC- 1175
|||||| |||||| |||| ||||||| || | |||||||||||||||| ||||||| |
Sbjct 1062 CTCGAAGCTTTACGTTCACGTTAAGCCAGCAT-TTGGAGGAACGTTCACTGATCTTG-CG 1119
Query 1176 TTCTGGATCTTCTGTCCATTTAACGGACCAGCAACCT-TAAAACTAGGACTCGTCG-ATA 1233
|| ||||| || ||||| || ||||||||||| | || | |||||||| ||| | | ||
Sbjct 1120 TTTTGGATTTTTTGTCCGTTCAACGGACCAGCGA-CTCTGAAACTAGGGCTCAT-GAATC 1177
Query 1234 TCTCATTGATC-AGTATTGGCCAACACGTCTGCGATTGGGAACATTTCACTCTCCGAATC 1292
|||| || | | | | ||| ||||| || || ||||||||||||||||| ||| |||||
Sbjct 1178 TCTCGTT-AGCTAAAACTGGTCAACATGTTTGTGATTGGGAACATTTCACACTCAGAATC 1236
Query 1293 AGCAATTTCTCTGGTGAGCTTTACTCAATCTACTTGTCTCAACACAGTGGCGGCGAGTGG 1352
||||||||||| || ||||||||||| || ||||| || ||||||||||||||||| |||
Sbjct 1237 AGCAATTTCTCCGGCGAGCTTTACTCGATTTACTTCTCACAACACAGTGGCGGCGAATGG 1296
Query 1353 ATCGAAGCAT-ACGACCTTGAAATCATTCCCGGAAGCAACAAAGCCGTTGTTTACTCTTC 1411
||| || | | | || ||||| || || ||||| |||||||| || |||||||| ||
Sbjct 1297 ATC-AAACCTCAAGATCTTGAGTTCGTTGAAGGAAGTAACAAAGCTGTGGTTTACTCGTC 1355
Query 1412 AAAACATGGTCACGCAAGCTTTCCTAGGGCTGGGACT-TACTTACAGGGATC-GACAATG 1469
|| ||||||||||| |||||| ||| | || ||| | || ||||| ||||| || ||
Sbjct 1356 GAAGCATGGTCACGCGAGCTTTTCTAAGTCT-GGATTGTATTTACAAGGATCTGA-TTTG 1413
Query 1470 CTTGGGATTGGGATAAGAAATGACACTGCGCGTAGTGAACTCTTGGTAGATTCGAG-CTC 1528
||||| ||||||||||| ||||| || ||| | || || | || || |||||||| |
Sbjct 1414 CTTGGAATTGGGATAAGGAATGATACAGCGAGAAGCGATTTGTTTGTTGATTCGAGTTTG 1473
Query 1529 ACGGTACGAGATCATTGCAGCGGAGTATCTCAGCGGAAACAGTGTGTTGGCAGAACCGCC 1588
| |||| ||||| | || ||||||||||| || | ||| | ||| ||||||||
Sbjct 1474 A-GGTATGAGATTGTGGCGGCGGAGTATCT---TGG--A-GGTGCGGTGGTGGAACCGCC 1526
Query 1589 GTGGTTGCA-G-TACATGAGAGAATGGGGACCAAAGGTTGTGTACGATTCAAGAGA-GGA 1645
|||||| | | || |||||||| |||||||| ||| ||||||| |||| ||| | |||
Sbjct 1527 GTGGTT--AGGTTATATGAGAGAGTGGGGACCGAAGATTGTGTATAATTCGAGA-ACGGA 1583
Query 1646 GATAGAG-AGATTG-GTGAATCGATTTCCGA-GGACGG-TTAGGGTTTCGCTTGCCACAG 1701
||| ||| || ||| |||| |||| || | ||| || | || || | ||| | |
Sbjct 1584 GATTGAGAAG-TTGAATGAA-AGATTGCC-ATGGA-GGATGAGAACTTGGGTTGATGCTG 1639
Query 1702 TGCTT-A-GAAAACTTCCGGTGGAATTATCCGGCGAGGAAGGTCCTACAGGACCAAAGGA 1759
|| || | ||| | |||||||||||||||||||||||||||| || || |||||||||||
Sbjct 1640 TG-TTGAGGAAGA-TTCCGGTGGAATTATCCGGCGAGGAAGGACCGACGGGACCAAAGGA 1697
Query 1760 GAAGAACAATTGGTATGGCGATGAAAGATGTTGAAATT 1797
|||||| ||||||| ||| ||||| ||||| ||| |||
Sbjct 1698 GAAGAATAATTGGTTTGGTGATGAGAGATGGTGATATT 1735
> Ahg941373 jgi|Araly1|941373|scaffold_601917.1
Length=1703
Score = 84.2 bits (45), Expect = 3e-15
Identities = 60/67 (90%), Gaps = 2/67 (3%)
Strand=Plus/Plus
Query 1730 CGGCGAGGAAGGTCCTACAGGACCAAAGGAGAAGAACAATTGGTATGGCGATGAAA-GAT 1788
|||||||||||||||||||||||||||||||||| | |||||| | || ||||||| | |
Sbjct 1620 CGGCGAGGAAGGTCCTACAGGACCAAAGGAGAAGGATAATTGGGAAGGAGATGAAATG-T 1678
Query 1789 GTTGAAA 1795
|||||||
Sbjct 1679 GTTGAAA 1685
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 73856985055
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5