BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: halleri_transcript_ahg.fa
           32,672 sequences; 38,939,717 total letters



Query= AT1G06090.1

Length=1131
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  Ahg470621 jgi|Araly1|470621|fgenesh2_kg.1__575__AT1G06090.1         1393    0.0   
  Ahg910293 jgi|Araly1|910293|Al_scaffold_0001_547                     941    0.0   
  Ahg470654 jgi|Araly1|470654|fgenesh2_kg.1__608__AT1G06360.1          623    9e-178
  Ahg470653 jgi|Araly1|470653|fgenesh2_kg.1__607__AT1G06350.1          584    4e-166


> Ahg470621 jgi|Araly1|470621|fgenesh2_kg.1__575__AT1G06090.1
Length=941

 Score = 1393 bits (754),  Expect = 0.0
 Identities = 883/945 (93%), Gaps = 9/945 (1%)
 Strand=Plus/Plus

Query  1    ATATCTCAAAAATAACAATCCCA-TTCCTCGACGGTCCAATGGGGGACACCACAAAGGAC  59
            ||| |||||||||||||| |||| |||||||||||||||||||||||||| || ||||||
Sbjct  1    ATACCTCAAAAATAACAAACCCATTTCCTCGACGGTCCAATGGGGGACACTACTAAGGAC  60

Query  60   GATGGGTCTAGCCAAAGTAAAGCGGTGCGT-GGGGAAAAAAGAGCATTCTTTTTCAGGAA  118
            ||||| ||||||||||| |||||||| ||| |||| ||||||||| ||||||||||||||
Sbjct  61   GATGGCTCTAGCCAAAGCAAAGCGGTACGTAGGGG-AAAAAGAGCGTTCTTTTTCAGGAA  119

Query  119  ATGGACCCGGATCGATATAGCGAGAGCTTCGGCTGTTGGGGCTGTGCATCTATTGTGTCT  178
            |||||||||||||||| ||  ||||||||||||||||||| |||||||||||||||||||
Sbjct  120  ATGGACCCGGATCGATGTAATGAGAGCTTCGGCTGTTGGGTCTGTGCATCTATTGTGTCT  179

Query  179  GTTGGCTCCGTTTAACTAT-AAATGGGAAGCTCTCCGGTTCGGTGTGATTCTCGCTATAG  237
             ||||| |||||||||| | |||||||||||| | ||||| |||||||||||||||||||
Sbjct  180  ATTGGCACCGTTTAACT-TCAAATGGGAAGCTTTTCGGTTTGGTGTGATTCTCGCTATAG  238

Query  238  TGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACTCACAAGAGCTTTAAGC  297
            |||||||||| ||||||||||||||||||||||||||||||||||||  |||||||||||
Sbjct  239  TGACTAGTCTCAGCATTACATTTTCATACCATAGGAACTTGACTCACCGGAGCTTTAAGC  298

Query  298  TTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCTTCAGGGTCATC  357
            | ||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||
Sbjct  299  TCCCTAAATGGCTTGAATATCTATTCGCTTACACTGCCCTTTTCGCGCTTCAGGGTCATC  358

Query  358  CAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGACC  417
            | |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct  359  CGATAGATTGGGTGAGCACGCATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGACC  418

Query  418  CACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTTTGGATATTCGACACCAGTT  477
            ||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct  419  CACATAGTCCTATAGAAGGATTTTGGTTCAGTCACGTCTTGTGGATATTCGACACCAGTT  478

Query  478  ACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGACTTGAAGCAACAATGGTTCT  537
            | |||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct  479  ATATCAGAGAAAAGTGTGGAGGACGTGACAACGTGATGGACTTGAAGAAACAATGGTTCT  538

Query  538  ATAGGTTTCTTCGAAACACAATTGGTCTCCACATCTTAACATTTTGGACCCTCGTCTATT  597
            ||||||||||||||||||||||||| |||||||||||| |||||||||| ||||||||||
Sbjct  539  ATAGGTTTCTTCGAAACACAATTGGCCTCCACATCTTATCATTTTGGACTCTCGTCTATT  598

Query  598  TATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTTGGAGGAACAATCGGTTACA  657
            |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct  599  TATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTGGGAGGAGCAATCGGTTACA  658

Query  658  ATGGGACTTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGCGAGCATGGAACACTA  717
            | |||||||||||||||||||| |||||||||||||||||  ||| ||||||||| || |
Sbjct  659  ACGGGACTTGGCTCATAAACTCAGCATGCCATATTTGGGGCACGCAAGCATGGAATACCA  718

Query  718  AGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGCTGGCACA  777
            ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct  719  AGGACACTTCTCGTAACGTTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGCTGGCACA  778

Query  778  ACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGACTGGAATGGTATCAGGTAGACT  837
            |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||
Sbjct  779  ACAACCACCATGCCTTTGAGGCGTCGGCTAGACACGGACTGGAATGGTATCAGGTAGACT  838

Query  838  TAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGTTTAGCCACGGATGTCAAATTGC  897
            ||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||
Sbjct  839  TAACTTGGTACCTCATTTGGTTCTTCCAGGCTCTCGGTTTAGCCACCGATGTCAAATTGC  898

Query  898  CTACCGATGCTCA-AAAGCGAAA-ATTGGCTTTCGCTCGTTAGTC  940
            ||||||||||||| ||| || || || ||||||||||||||||||
Sbjct  899  CTACCGATGCTCAGAAA-CGCAAGAT-GGCTTTCGCTCGTTAGTC  941


> Ahg910293 jgi|Araly1|910293|Al_scaffold_0001_547
Length=900

 Score =  941 bits (509),  Expect = 0.0
 Identities = 776/904 (86%), Gaps = 22/904 (2%)
 Strand=Plus/Plus

Query  45   GACACCACAAAGGACGATGGGTCTAGCCAAAGTAAAGCGGTGCGTGGGGAAAAAAGAGCA  104
            |||||||| ||||||||||| ||||||||||  ||| | ||||||  |||||||||||| 
Sbjct  7    GACACCACTAAGGACGATGGCTCTAGCCAAAACAAATCAGTGCGTAAGGAAAAAAGAGC-  65

Query  105  TTC-TTTTTCAGGAAATGGACCCGGATCGATATAGCGAGAGCTTCGGCTGTTGGGGCT-G  162
              | ||||| ||||||||||||| | ||||| | | |||||||||| ||||| ||  | |
Sbjct  66   GCCTTTTTTAAGGAAATGGACCCAGTTCGATGTTGGGAGAGCTTCGACTGTT-GGAATCG  124

Query  163  TGCATCTATTGTGTCTGTTGGCTCCGTTTAACTATAAATGGGAAGC-TCTCCGGTTCGGT  221
            ||||||| |||||||| |||||||| |||||||| ||||||||||| | | |||||||||
Sbjct  125  TGCATCTGTTGTGTCTATTGGCTCCTTTTAACTACAAATGGGAAGCAT-TGCGGTTCGGT  183

Query  222  GTGATTCTCGCTATAGTGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACT  281
               ||| || | |||||||| |  || ||||||||||| || ||||||||||||||||||
Sbjct  184  ACAATTATCACCATAGTGACAAACCTCAGCATTACATTCTCGTACCATAGGAACTTGACT  243

Query  282  CACAAGAGCTTTA-AGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTT  340
            |||  |||||||| | || ||||||||||||||||||||||||||||| ||||| |||||
Sbjct  244  CACCGGAGCTTTACA-CTACCTAAATGGCTTGAATATCCATTCGCTTATTCTGCTCTTTT  302

Query  341  CGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCAC  400
             || ||||||||| ||||| | ||||||||||| |  ||||| |||||||||||||||||
Sbjct  303  TGCACTTCAGGGTGATCCATTGGATTGGGTGAGCATTCATAGATTCCATCACCAGTTCAC  362

Query  401  AGATTCAGACCGTGACCCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTT-T  459
            |||||| |||||||| |||||||| |||||||||||||||||||||||||| || ||| |
Sbjct  363  AGATTCTGACCGTGATCCACATAGCCCTATCGAAGGATTCTGGTTCAGTCATGT-TTTGT  421

Query  460  GGATATTCGACACCAG-TTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGAC  518
            ||||||| ||| || |  || |||||||||||||||||| ||||| ||||||||||||||
Sbjct  422  GGATATTTGACTCC-GAATATATCAGAGAAAAGTGCGGAAGACGTAACAACGTGATGGAC  480

Query  519  TTGAAGCAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGG-TCTCCACATCTTAAC  577
            |||||||||||||||||||| ||||||||   ||| || ||||| ||||||||||||   
Sbjct  481  TTGAAGCAACAATGGTTCTACAGGTTTCTAAAAAAGAC-ATTGGTTCTCCACATCTTTGT  539

Query  578  ATTTTGGACCCTCGTCTATTTATGGGGTGGTCTACCTTACCTAACTTGCG-GCGTGGGTG  636
            ||||||||||||| |||| ||||||||||||||||||||||||||||| |  ||||||| 
Sbjct  540  ATTTTGGACCCTCATCTACTTATGGGGTGGTCTACCTTACCTAACTTG-GACCGTGGGT-  597

Query  637  T-TGGAGGAACAATCGGTTACAATGGGACTTGGCTCATAAACTCGGCATGCCATATTTGG  695
            | ||||||| || ||| |||| | |||||||||||| |||||||||||||||||||||| 
Sbjct  598  TCTGGAGGAGCATTCGCTTACCACGGGACTTGGCTCGTAAACTCGGCATGCCATATTTGT  657

Query  696  GGTTCGCGAGCATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTC  755
            ||||||| ||  ||| |||| || ||||||||||||||| |||||||||||| || ||| 
Sbjct  658  GGTTCGCAAGTGTGGCACACCAATGACACCTCTCGTAACGTTTGGTGGCTAGCGCTATTG  717

Query  756  ACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGA  815
            || ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||
Sbjct  718  ACTATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCGTCGGCTAGGCATGGA  777

Query  816  CTGGAATGGTATCAGGTAGACTTAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGT  875
            || |||||||||||| ||||| ||||||||||||||||| | ||||| || |||||||| 
Sbjct  778  CTAGAATGGTATCAGTTAGACATAACTTGGTACCTCATTCGGTTCTTTCAGGCTCTCGGC  837

Query  876  TTAGCCACGGATGTCAAATTGCCTACCGATGCTCA-AAAGCGAAA-ATTGGCTTTCGCTC  933
            ||||||||  ||||||||||||||||||||| ||| ||| || || || |||| || |||
Sbjct  838  TTAGCCACCAATGTCAAATTGCCTACCGATGATCAGAAA-CGCAAGAT-GGCTATCCCTC  895

Query  934  GTTA  937
            ||||
Sbjct  896  GTTA  899


> Ahg470654 jgi|Araly1|470654|fgenesh2_kg.1__608__AT1G06360.1
Length=984

 Score =  623 bits (337),  Expect = 9e-178
 Identities = 638/781 (82%), Gaps = 30/781 (4%)
 Strand=Plus/Plus

Query  161  TGTGCATC-TATTGTGTCTGTTGGCTCCGTTTAACTATAAATGGGAAGCTCTCCGGTTCG  219
            |||||| | | |||||||| ||||| ||||||||||| |||||||||||||| |||||||
Sbjct  165  TGTGCA-CTTTTTGTGTCTCTTGGCACCGTTTAACTACAAATGGGAAGCTCTACGGTTCG  223

Query  220  G---TGTGATTCT-CGCTATAGTGACTAGTCTTAGCATTACATTTTCATACCATAGGAAC  275
            |   ||||  ||| ||| ||  |||||   || ||||||||||| |||||||||||||||
Sbjct  224  GTTTTGTG-CTCTACGC-AT--TGACTTCACTCAGCATTACATTCTCATACCATAGGAAC  279

Query  276  TTGACTCACAAGAGCTTTAAGCTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCC  335
            ||| |||||  |||||| |||||||| ||||||||||||||||| || ||||| | ||| 
Sbjct  280  TTGGCTCACCGGAGCTTCAAGCTTCCGAAATGGCTTGAATATCCTTTAGCTTATTTTGCT  339

Query  336  CTTTTCGCGCTTCAGGGTCATCCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAG  395
             |||| || ||||||||| ||||  | ||||||||||| | |||||||||||||||||||
Sbjct  340  GTTTTTGCTCTTCAGGGTGATCCGTTGGATTGGGTGAGCATACATAGGTTCCATCACCAG  399

Query  396  TTCACAGATTCAGACCGTGACCCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTC  455
            ||||| ||||| ||||||||||||||||| |||||||||||||| ||||||||||| || 
Sbjct  400  TTCACTGATTCTGACCGTGACCCACATAGCCCTATCGAAGGATTTTGGTTCAGTCATGTG  459

Query  456  TTTTGGATAT-TCGACAC-CAGTTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGA  513
            |  ||||||| | ||||| | |||| |||| | | ||||| ||||||||| |||||||||
Sbjct  460  TGGTGGATATGT-GACACTC-GTTATATCAAATATAAGTGTGGAGGACGTAACAACGTGA  517

Query  514  TGGACTTGAAGCAACAATGGTTCTATAGGTTTCTTCGAAACACAATTGGTCTCCACATCT  573
            ||||||||||||||||||||||||| |||||||| ||||  ||||||||| ||||| |||
Sbjct  518  TGGACTTGAAGCAACAATGGTTCTACAGGTTTCTACGAATGACAATTGGTTTCCACGTCT  577

Query  574  TAACATTTTGGACCCTCGTCTAT-T-TATGGGGTGGTCTACCTTACCTAACTTGCGGCGT  631
            |||  ||||||||  || ||||| | |||||  |||| |||||||||| || ||||||| 
Sbjct  578  TAATGTTTTGGACTGTCCTCTATCTCTATGG--TGGTTTACCTTACCTTACATGCGGCGG  635

Query  632  GGGTGTTGGAGGAACAATCGGTTACAATGGGACTTGGCTCATAAACTCGGCATGCCATAT  691
            ||| ||||||||    || || ||| | | ||| |||||| |||||||||||||||||||
Sbjct  636  GGGCGTTGGAGGTGTGATTGGGTACCACGTGACATGGCTCGTAAACTCGGCATGCCATAT  695

Query  692  TTGGGGTTCGCGAG-CATGGAACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGC  750
            |||||||||| | | ||||||| ||||| ||||| ||||||||| ||||||||||| | |
Sbjct  696  TTGGGGTTCGAG-GTCATGGAAGACTAAAGACACATCTCGTAACGTTTGGTGGCTAAG-C  753

Query  751  C-ATTCACGATGGGAGAGAGCTGGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGG  809
              ||| || ||||||||||| ||||| || || ||||| || |||||| | || || |||
Sbjct  754  TTATTTACAATGGGAGAGAGTTGGCATAATAATCACCACGCGTTTGAGTCATCAGCGAGG  813

Query  810  CACGGACTGGAATGGTATCAGGTAGACT-TAACTTGGTACCTCATTTGTTTCTTCCAAGC  868
            || ||| |||| ||||  ||  |||| | | |||||||| |||||| |  | ||  | | 
Sbjct  814  CAAGGATTGGAGTGGTGGCAAATAGA-TATCACTTGGTATCTCATTCGACTATTTGAGGT  872

Query  869  TCTCGGTTTAGCCACGGATGTCAAATTGCC-TACCGA-TGCTCA-AAAGCGAAAATTGGC  925
            |||||| |||||||| ||||| |||||||| | | || |  ||| ||| || ||||||||
Sbjct  873  TCTCGGATTAGCCACTGATGTGAAATTGCCCT-CGGAATT-TCAGAAA-CGGAAATTGGC  929

Query  926  T  926
            |
Sbjct  930  T  930


> Ahg470653 jgi|Araly1|470653|fgenesh2_kg.1__607__AT1G06350.1
Length=959

 Score =  584 bits (316),  Expect = 4e-166
 Identities = 715/904 (79%), Gaps = 41/904 (5%)
 Strand=Plus/Plus

Query  14   AAC-AATCCCATTCCTCGACGGTCC-A-ATGGGGGA-CACCACAAAG-GACGATGGGTCT  68
            ||| ||| | ||||||| ||||||| | ||| | || | ||||  || |||||||  || 
Sbjct  11   AACGAATACAATTCCTCAACGGTCCGATATGTGTGATC-CCAC-TAGAGACGATGTCTCC  68

Query  69   AGCCAAAGTAAAGCGGTGC-GTGGGGAAAAAAGAGCATTCTTTTTCAG-G-AAATGGACC  125
            |||||||| | |||||| | ||   |||||||| ||  |  ||||||| | |||||| ||
Sbjct  69   AGCCAAAGCAGAGCGGT-CAGTATAGAAAAAAGGGC-GT-ATTTTCAGAGAAAATGG-CC  124

Query  126  C--GGATCGAT-ATAGCGAGAGC-TTCGGCTGTTGGGGCT-GTGCATC-TATTGTGTCTG  179
            |  || |||||  ||   ||||| ||   | ||| | | | ||||| | | |||||||| 
Sbjct  125  CTTGG-TCGATGTTA-TAAGAGCGTT-AACCGTT-GTGATAGTGCA-CTTTTTGTGTCTC  179

Query  180  TTGGCTCCGTTTAACTATAAATGGGAAGCTCTCCGGTTCGGTGTGAT--TC-TCGCTATA  236
            ||||| |||||||||||| ||||||||||| | ||||||||| || |  || ||| |  |
Sbjct  180  TTGGCGCCGTTTAACTATGAATGGGAAGCTTTTCGGTTCGGTTTGGTGCTCTTCG-T-GA  237

Query  237  GTGACTAGTCTTAGCATTACATTTTCATACCATAGGAACTTGACTCACAAGAGCTTTAAG  296
             | ||||  || ||||| || || |||||||||||||||||| |||||  |||||| |||
Sbjct  238  -TAACTACACTCAGCATCACCTTCTCATACCATAGGAACTTGTCTCACCGGAGCTTCAAG  296

Query  297  CTTCCTAAATGGCTTGAATATCCATTCGCTTACTCTGCCCTTTTCGCGCTTCAGGGTCAT  356
             | || |||||| | |||||||| || ||||| |||||  ||||||| || |||||| ||
Sbjct  297  ATCCCGAAATGGATCGAATATCCTTTTGCTTATTCTGCTGTTTTCGCTCTCCAGGGTGAT  356

Query  357  CCAATAGATTGGGTGAGTACACATAGGTTCCATCACCAGTTCACAGATTCAGACCGTGAC  416
            ||||| ||||||||||| | |||||||||||||||||||||||| ||||| |||||||||
Sbjct  357  CCAATGGATTGGGTGAGCATACATAGGTTCCATCACCAGTTCACGGATTCTGACCGTGAC  416

Query  417  CCACATAGTCCTATCGAAGGATTCTGGTTCAGTCACGTCTTTTGGATATTCGACA-CCAG  475
            |||||||| ||||  |||||||| |||||||| ||  | || |||||||| |||| ||| 
Sbjct  417  CCACATAGCCCTAAAGAAGGATTATGGTTCAGCCATATATTGTGGATATTTGACACCCA-  475

Query  476  TTACATCAGAGAAAAGTGCGGAGGACGTGACAACGTGATGGACTTGAAGCAA-CAATGGT  534
             ||||||| | | ||||| ||||||||||||||||| |||||||||||| || |||||||
Sbjct  476  ATACATCAAATACAAGTGTGGAGGACGTGACAACGTAATGGACTTGAAG-AAGCAATGGT  534

Query  535  TCTATAGGTTTCTTCGAAACACAATTGGTCTCCACATCTTAACATTTTGGACCCTCGTCT  594
            |||||| |||||| ||||  || |||| ||| ||||||  ||  ||||||||| || |||
Sbjct  535  TCTATAAGTTTCTACGAAGGACTATTGCTCTTCACATCGCAATGTTTTGGACCGTCCTCT  594

Query  595  ATTTATGGGGTGGTCTACCTTACCTAACTTGCGGCGTGGGTGTTGGAGGAACAATCGGTT  654
            || | |  |||||| |||||||||| || ||||||| ||||||||||||    || || |
Sbjct  595  ATCTCTACGGTGGTTTACCTTACCTTACATGCGGCGGGGGTGTTGGAGGTGTGATAGGGT  654

Query  655  A-CAATGGGA-CTTGGCTCATAAACTCGGCATGCCATATTTGGGGTTCGCGAG-CATGGA  711
            | | | | || |||  ||| ||||||||||||||||||||||||||||  | | | ||||
Sbjct  655  ATC-ACGTGACCTT-TCTCGTAAACTCGGCATGCCATATTTGGGGTTCAAG-GTCGTGGA  711

Query  712  ACACTAAGGACACCTCTCGTAACATTTGGTGGCTAGGGCCATTCACGATGGGAGAGAGCT  771
            | ||||| ||||| ||||||||| |||||||| || |    || |||||||||||||| |
Sbjct  712  AGACTAAAGACACATCTCGTAACGTTTGGTGGTTAAGTTTGTTTACGATGGGAGAGAGTT  771

Query  772  GGCACAACAACCACCATGCCTTTGAGGCCTCGGCCAGGCACGGACTGGAATGGTATCAGG  831
            |||||||||||||||| || |||||| | ||||| ||||| ||| |||| ||||  ||| 
Sbjct  772  GGCACAACAACCACCACGCGTTTGAGTCATCGGCGAGGCAAGGATTGGAGTGGTGGCAGA  831

Query  832  TAGACTTAACTTGGTACCTCATTTGTTTCTTCCAAGCTCTCGGTTTAGCCACGGATGTCA  891
            ||||| ||||||||||||||||| |  | ||  ||| ||| || |||||||| ||||| |
Sbjct  832  TAGACATAACTTGGTACCTCATTCGACTATTTGAAGTTCTTGGATTAGCCACTGATGTGA  891

Query  892  AATT  895
            ||||
Sbjct  892  AATT  895



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 42163946202


  Database: halleri_transcript_ahg.fa
    Posted date:  Sep 25, 2014  2:02 AM
  Number of letters in database: 38,939,717
  Number of sequences in database:  32,672



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5