BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G07360.1
Length=1689
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470757 jgi|Araly1|470757|fgenesh2_kg.1__711__AT1G07360.1 2433 0.0
Ahg344719 jgi|Araly1|344719|fgenesh1_pg.C_scaffold_4001061 1219 0.0
Ahg487526 jgi|Araly1|487526|fgenesh2_kg.6__660__AT5G07060.1 529 3e-149
> Ahg470757 jgi|Araly1|470757|fgenesh2_kg.1__711__AT1G07360.1
Length=1556
Score = 2433 bits (1317), Expect = 0.0
Identities = 1479/1559 (95%), Gaps = 4/1559 (0%)
Strand=Plus/Plus
Query 6 AAAATCTCGTCGTCTCCTTCGTGTTCGAGATTTGATATCGACTAATCGAATCAGAGGATA 65
|||||| ||||| |||||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 AAAATCCCGTCGGCTCCTTGGTGTTCGAGATTTGATATCGAATAATCGAATCAGAGGATA 60
Query 66 AGAGAATGGCTCACAGAATACTGAGAGATCATGAAGCCGATGGATGGGAACGCTCCGATT 125
||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 61 AGAGAATGGCTCACAGAATACTGAGAGATCATGAAGCTGATGGATGGGAACGCTCTGATT 120
Query 126 TCCCAATCATCTGCGAATCTTGTCTCGGTGACAACCCCTACGTGCGAATGACCAAAGCGA 185
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 121 TCCCAATCATCTGCGAATCTTGTCTCGGTGACAACCCCTACGTGCGAATGACTAAAGCGA 180
Query 186 ATTATGATAAGGAATGCAAGATATGTACACGACCTTTCACGGTGTTTAGGTGGCGACCTG 245
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 181 ATTATGATAAGGAATGCAAGATTTGTACACGACCTTTCACGGTGTTTAGGTGGCGACCTG 240
Query 246 GCCGGGATGCTAGATACAAGAAAACCGAAATTTGTCAGACTTGCTGCAAGTTGAAAAATG 305
|||| |||||||||||||||||||||||||||||||||||||| |||||| | |||||||
Sbjct 241 GCCGCGATGCTAGATACAAGAAAACCGAAATTTGTCAGACTTGTTGCAAGCTCAAAAATG 300
Query 306 TTTGTCAAGTCTGTCTTCTGGATCTTGAGTATGGTCTTCCAGTTCAAGTAAGAGACACAG 365
| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 301 TATGTCAAGTCTGTCTTCTGGATCTTGAGTATGGTCTTCCAGTTCAAGTCAGAGACACAG 360
Query 366 CACTCAACATTAGTACTCATGACTCTATCCCTAAAAGTGATGTCAACAGAGAGTATTTTG 425
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 CCCTCAACATTAGTACTCATGACTCTATCCCTAAAAGTGATGTCAACAGAGAGTATTTTG 420
Query 426 CTGAAGAGCATGACAGGAAGGCTAGAGCTGGACTGGATTATGAATCTTCATTCGGGAAGA 485
|||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct 421 CTGAAGAGCACGACAGAAAGACTAGAGCTGGACTGGATTATGAATCTTCATTCGGGAAGA 480
Query 486 TGCGACCCAATGATACTATTTTAAAGCTTCAAAGAACAACACCGTACTATAAGAGGAACC 545
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 481 TGCGACCTAATGATACTATTTTAAAGCTTCAAAGAACAACACCATACTATAAGAGGAACC 540
Query 546 GAGCACATGTTTGTAGTTTCTTCATCAGGGGTGAGTGTACAAGAGGTGCTGAATGTCCAT 605
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 541 GAGCACATGTTTGTAGTTTCTTCATCAGGGGTGAGTGTACAAGAGGTGCCGAATGTCCAT 600
Query 606 ACCGGCATGAGATGCCCGAAACAGGAGAGCTATCCCAGCAAAACATAAAAGACCGTTATT 665
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 601 ACCGGCATGAGATGCCCGAAACAGGAGAGCTATCCCAGCAAAACATTAAAGACCGTTATT 660
Query 666 ATGGTGTTAATGATCCAGTTGCTATGAAGTTGCTTGGCAAAGCTGGTGAGATGGGCACTT 725
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 661 ATGGTGTTAATGATCCAGTTGCTATGAAGTTGCTCGGCAAAGCTGGTGAGATGGGCACTT 720
Query 726 TGGAATCGCCAGACGATGAAAGCATCAAAACCCTTTACGTCGGTGGACTTAACTCGAGAA 785
||||||| ||||| ||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 721 TGGAATCACCAGATGATGAAAGCATTAAAACGCTTTACGTCGGTGGACTTAACTCGAGAA 780
Query 786 TTCTCGAGCAGGACATACGAGACCAATTCTACGCTCATGGAGAAATTGAATCTATCAGAA 845
| ||||||||||||||| ||||||| ||||| ||| |||||||||| ||||| |||||||
Sbjct 781 TCCTCGAGCAGGACATAAGAGACCAGTTCTATGCTTATGGAGAAATCGAATCCATCAGAA 840
Query 846 TCTTGGCCGATAAAGCCTGTGCATTTGTCACATACACAAGCCGTGAAGGTGCAGAGAAGG 905
||||||| |||||||| ||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 841 TCTTGGCTGATAAAGCTTGTGCGTTTGTCACATACACAAGCCGAGAAGGAGCAGAGAAGG 900
Query 906 CTGCGCAAGAGCTCTCCAACAGGCTAGTCATCAACGGTCAGAGGCTAAAACTCACATGGG 965
| || | ||||||| ||||||||||||| |||| |||||||||||||| ||||||||||
Sbjct 901 CCGCACTAGAGCTCGCCAACAGGCTAGTTGTCAATGGTCAGAGGCTAAAGCTCACATGGG 960
Query 966 GAAGACCCAAACCTGATCAAGATGGTGCAAACCAACAGGGCGGTGTGGCTCATAGTGGGT 1025
|||||||||||||||||||||||||| |||||||||| || ||||||||||||||||| |
Sbjct 961 GAAGACCCAAACCTGATCAAGATGGTTCAAACCAACAAGGTGGTGTGGCTCATAGTGGTT 1020
Query 1026 TACTACCTCGAGCCGTTATATCTCAGCAGCACAATCAACCCCCACCAATGCAGCAGTACT 1085
||||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||||
Sbjct 1021 TACTACCTCGAGCCGTTATATCTCAGCAGCATAATCAACCCCCAGCAATGCAACAGTACT 1080
Query 1086 ATATGCACCCACCACCAGCTAACCAAGACAAACCTTATTACCCATCAATGGACCCACAGA 1145
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 ACATGCACCCACTACCAGCTAACCAAGACAAACCTTATTACCCATCAATGGACCCACAGA 1140
Query 1146 GAATGGGTGCAGTCATTTCAACCCAAGAGGCTGGTGGTTCAAGCACTGAGAACAACGGAG 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1141 GAATGGGTGCAGTCATTTCAACCCAAGAGGCTGGTGGTTCAAGCACTGAGAACAACGGAG 1200
Query 1206 CTTCATCTTCTTCTTACATGATGCCTCCACACCAGTCATACCCACCACCACCATATGGAT 1265
|||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||
Sbjct 1201 CTTCATCTTCTTCTTACATGGTGCCTCCACATCAGCCATACCCACCACCACCATATGGAT 1260
Query 1266 ATATGCCATCGCCTTACCAGCAGCAGTATCCTCCTAACCATCATCATCAACCTAGTCCTA 1325
||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct 1261 ATATGCCATCGCCTTACCAGCAGCAGTATCCTCCTAACCATCATCATCATCCTGGTCCTA 1320
Query 1326 TGCAGCACTATGCCCCGCCTCCAGCAGCTTACCCGTACCCACAGCAACCTGGTCCTGGAT 1385
||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||
Sbjct 1321 TGCAGCACTATGCCCCGCCCCCAGCAGCTTACCCGTACCCACAGCAAGCTGGTCCTGGAT 1380
Query 1386 CAAGACCTGCACCGTCTCCAACCGCGGTCTCTGCTATATCACCCGACTCTGCACCTGCTG 1445
|||| |||||||||||||||| ||||||||||||| ||||||||||||||||||| |||
Sbjct 1381 CAAGGCCTGCACCGTCTCCAAGCGCGGTCTCTGCTCCATCACCCGACTCTGCACCTACTG 1440
Query 1446 GGTCTGGAGCACCTTCGGGATCCTCTCAACAAGCTCCTGATGTTTCTAC-AGCTACTGGT 1504
|||||||||||||||| |||||||||||| || |||||| ||||||||| | ||||||||
Sbjct 1441 GGTCTGGAGCACCTTCAGGATCCTCTCAAGAACCTCCTGCTGTTTCTACTA-CTACTGGT 1499
Query 1505 TCGTCTCAGTAGAGAAGAAATATCGCTTAAAAAATGTACTGCAAGTTTCCCGCTATTCA 1563
|||||||||||||||| || | |||||||||| |||||||||||||||||| ||||||
Sbjct 1500 TCGTCTCAGTAGAGAACAATTCTCGCTTAAAA--TGTACTGCAAGTTTCCCGATATTCA 1556
> Ahg344719 jgi|Araly1|344719|fgenesh1_pg.C_scaffold_4001061
Length=1395
Score = 1219 bits (660), Expect = 0.0
Identities = 1027/1198 (86%), Gaps = 49/1198 (4%)
Strand=Plus/Plus
Query 71 ATGGCTCACAGAATACTGAGAGATCATGAAGCCGATGGATGGGAACGCTCCGATTTCCCA 130
||||| || ||||||||||||||||| || || |||||||||||||| || |||||||||
Sbjct 1 ATGGCGCATAGAATACTGAGAGATCACGAGGCTGATGGATGGGAACGTTCTGATTTCCCA 60
Query 131 ATCATCTGCGAATCTTGTCTCGGTGACAACCCCTACGTGCGAATGACCAAA-GCGAATTA 189
||||||||||| ||||||||||||||||| || |||||| |||||| |||| || |||||
Sbjct 61 ATCATCTGCGAGTCTTGTCTCGGTGACAATCCTTACGTGAGAATGA-CAAAGGCAAATTA 119
Query 190 TGATAAGGAATGCAAGATATGTACACGACCTTTCACGGTGTTTAGGTGGCGACCTGGCCG 249
|||||||||||||||||| ||||| || ||||||||||| || |||||||||||||||||
Sbjct 120 TGATAAGGAATGCAAGATCTGTACTCGGCCTTTCACGGTATTCAGGTGGCGACCTGGCCG 179
Query 250 GGATGCTAGATACAAGAAAACCGAAATTTGTCAGACTTGCTGCAAGTTGAAAAATGTTTG 309
||||| ||||||||||| || ||| |||||||||| || |||||| |||| ||||| ||
Sbjct 180 AGATGCGAGATACAAGAAGACTGAAGTTTGTCAGACATGTTGCAAGCTGAAGAATGTGTG 239
Query 310 TCAAGTCTGTCTTC-TGGATCTTGAGTATGGTCTTCCAGTTCAAGTAAGAGACACAGCAC 368
|||||| |||| || |||||||||||||||||||||||||||| || |||||||| || |
Sbjct 240 TCAAGTTTGTC-TCTTGGATCTTGAGTATGGTCTTCCAGTTCAGGTCAGAGACACGGCGC 298
Query 369 TCAACATTAGTACTCATGACTCTATCCCTAAAAGTGATGTCAACAGAGAGTATTTT-GCT 427
||||||||||||||||||| |||||||| ||||||||||| ||| | |||| |||| |||
Sbjct 299 TCAACATTAGTACTCATGATTCTATCCCAAAAAGTGATGTGAACCGCGAGT-TTTTCGCT 357
Query 428 GAAGAGCATGA-CAGGAAGGCTAGAGCTGGACTGGATTATGAATCTTCATTCGGGAAGAT 486
||||||||||| | | ||| | ||||||||||| |||||||| ||||| || ||||||||
Sbjct 358 GAAGAGCATGATC-GAAAGACGAGAGCTGGACTAGATTATGAGTCTTCTTTTGGGAAGAT 416
Query 487 GCGACCCAATGATACTAT-TTTAAAGCTTCAAAGAACAACACCGTACTATAAGAGGAACC 545
||||| |||||||| || | | ||||||||| ||||| || || ||||| ||||| |
Sbjct 417 TCGACCTAATGATACCATCCGT-ATGCTTCAAAGGACAACGCCATATTATAAAAGGAATC 475
Query 546 GAGCACATGTTTGTAGTTTCTTCATCAGGGGTGAGTGTACAAGAGGTGCTGAATGTCCAT 605
|||||||| |||||||||||||||| ||||| |||||||||||||||||||| |||||||
Sbjct 476 GAGCACATATTTGTAGTTTCTTCATTAGGGGAGAGTGTACAAGAGGTGCTGAGTGTCCAT 535
Query 606 ACCGGCATGAGATGCCCGAAACAGGAGAGCTATCCCAGCAAAACATAAAAGACCGTTATT 665
|||| ||||||||||| |||||||| ||| |||||||||| ||||| ||||||||||| |
Sbjct 536 ACCGTCATGAGATGCCTGAAACAGGGGAGTTATCCCAGCAGAACATTAAAGACCGTTACT 595
Query 666 ATGGTGTTAATGATCCAGTTGC-TATGAAGTTGCTTGGCAAAGCTGGTGAGATGGGCACT 724
||||||| |||||||||||||| | ||||||| |||||||| ||||||||||||||||||
Sbjct 596 ATGGTGTAAATGATCCAGTTGCGT-TGAAGTTACTTGGCAAGGCTGGTGAGATGGGCACT 654
Query 725 TTGGAATCGCCAGACGATGAAAGCATCAAAACCCTTTACGTCGGTGGACTTAACTCGAGA 784
|||||||| ||||| ||| ||||||||||||| ||||| || ||||| || |||||||||
Sbjct 655 TTGGAATCTCCAGAGGATCAAAGCATCAAAACGCTTTATGTTGGTGGGCTAAACTCGAGA 714
Query 785 ATTCTCGAGCAGGACATACGAGACCAATTCTACG-CTCATGGAGAAATTGAATCTATCAG 843
| || ||||| ||||| || || |||||||||| || |||||||||| ||||| || ||
Sbjct 715 GTCCTTGAGCAAGACATTCGCGATCAATTCTACGCCT-ATGGAGAAATCGAATCCATTAG 773
Query 844 AATCTTGGCCGATAAAGCCTGTGCATTTGTCACATACACAAGCCGTGAAGGTGCAGAGAA 903
||||||||| || ||||| ||||| |||||||||||||||| ||| ||||| ||||||||
Sbjct 774 AATCTTGGCTGAGAAAGCATGTGCGTTTGTCACATACACAACCCGAGAAGGCGCAGAGAA 833
Query 904 GGCTGC-GCAAGAGCTCTCCAACAGGCTAGTCATCAACGGTCAGAGGCTAAAACTCACAT 962
|| || | |||||||| ||||||||||| |||||||||||||||||||||||||||
Sbjct 834 AGCAGCAG-AAGAGCTCAGTAACAGGCTAGTTGTCAACGGTCAGAGGCTAAAACTCACAT 892
Query 963 GGGGAAGACC-CA-------AA-CCTGATCAAGATGGTGCAAACCAACAGGGCGGTGTGG 1013
|||||||||| || || ||||||||||||||| | |||||||||||| ||||||
Sbjct 893 GGGGAAGACCTCAGGTTCCCAAACCTGATCAAGATGGTTCTAACCAACAGGGCAGTGTGG 952
Query 1014 CTCATAGTGGGTTACTACCTCGAGCCGTTATATCTCAGCAGCACAATCAACCCCCACCAA 1073
|||||||||| |||||||||||||| |||||||||||||| || |||||||| ||| |
Sbjct 953 CTCATAGTGGTTTACTACCTCGAGCAGTTATATCTCAGCAACAGAATCAACCTCCA--A- 1009
Query 1074 TGCAGCAGTACTATATGCACCCACCACCAGCT-AACC-----A--A-GACAAACC-TTAT 1123
||||||| ||||||||||||||||||||| | |||| | | |||| ||| || |
Sbjct 1010 TGCAGCAATACTATATGCACCCACCACCACCACAACCTCCTCATCAAGACAGACCCTT-T 1068
Query 1124 TACCCATCAATGGACCCACAGAGAATGGGTGCAGTCATTTCAACCCAAGAGGCTGGTGGT 1183
||||||||||||||||| ||||||||||||||||||||||| ||||||| | | |||
Sbjct 1069 TACCCATCAATGGACCCTCAGAGAATGGGTGCAGTCATTTCGTCCCAAGA--CAGC-GGT 1125
Query 1184 TCAAGCAC---TGAGAACA-ACGGAGCTTCATCTTCTTCTTACAT-GATGCCTCCACA 1236
|||||||| ||| |||| | |||||||| |||||||||||| | |||||| |||||
Sbjct 1126 TCAAGCACCAGTGACAACAGA-GGAGCTTCTTCTTCTTCTTAC-TCGATGCCACCACA 1181
> Ahg487526 jgi|Araly1|487526|fgenesh2_kg.6__660__AT5G07060.1
Length=984
Score = 529 bits (286), Expect = 3e-149
Identities = 402/456 (88%), Gaps = 16/456 (4%)
Strand=Plus/Plus
Query 120 CCGATTTCCCAATCATCTGCGAATCTTGTC-TCGGTGACAACCCCTACGTGCGAATGACC 178
||||||||||||||| |||||||||||| | |||| ||||| || |||||||||||||||
Sbjct 23 CCGATTTCCCAATCACCTGCGAATCTTG-CTTCGGAGACAATCCGTACGTGCGAATGACC 81
Query 179 AAAGCGAATTATGATAAGGAATGCAAGATATGTACACGACCTTTCAC-GGTGTTTAGGTG 237
|||| ||||||||||||||||||||||||||| ||| |||||||| | | ||||||||
Sbjct 82 CGAGCGGATTATGATAAGGAATGCAAGATATGTAGACGCCCTTTCACAGCT-TTTAGGTG 140
Query 238 GCGACCTGGCCGGGATGCTAGATACAAGAAAACCGAAATTTGTCAGACTTGCTGCAAGTT 297
|||||| |||||| ||||||||| |||||||||||||||||||||||||||||||| | |
Sbjct 141 GCGACCAGGCCGGAATGCTAGATTCAAGAAAACCGAAATTTGTCAGACTTGCTGCAGGCT 200
Query 298 GAAAAATGTTTGTCAAGTCTGTCTTCTGGATCTTGAGTATGGTCTTCCAGTTCAAGTAAG 357
||||||||| || |||||||||||||||||||| |||| ||||||||| ||||| || ||
Sbjct 201 GAAAAATGTATGCCAAGTCTGTCTTCTGGATCTCGAGTTTGGTCTTCCTGTTCAGGTCAG 260
Query 358 AGACACAGCACTC-AACATTA---GTACTCATGACTCTATCCCTAAA-AGTGATGTCAAC 412
|||||| |||||| || |||| |||||||| |||||||||| | | || ||||||||
Sbjct 261 AGACACCGCACTCCAA-ATTAATAGTACTCATTACTCTATCCC-AGAGAGCCATGTCAAC 318
Query 413 AGAGAGTATTTTGCTGAAGAGCATGACAGGAAGGCTAGAGCTGGACTGGATTATGAATCT 472
|||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct 319 AGAGAGTACTTTGCTGAAGAGCACGACAGGAAGACTAGAGCTGGACTGGATTATGAATCT 378
Query 473 TCATTCGGGAAGATGCGACCCAATGATACTATTTTAAAGCTTCAAAGAACAACACCGTAC 532
||||| |||||||||| ||| |||| |||||||| ||| ||||||||||||||||| |||
Sbjct 379 TCATTTGGGAAGATGCTACCTAATG-TACTATTTCAAATCTTCAAAGAACAACACCATAC 437
Query 533 TATAAGAGGAACCGAGC-AC-ATGTTTGTAGTTTCT 566
||| | |||||||| || || | |||||||||||||
Sbjct 438 TATGATAGGAACCG-GCCACGA-GTTTGTAGTTTCT 471
Score = 265 bits (143), Expect = 9e-70
Identities = 190/213 (89%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 616 GATGCCCGAAACAGGAGAGCTATCCCAGCAAAACATAAAAGACCGTTATTATGGTGTTAA 675
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 480 GATGCCCGAAACAGGAGAGCTATCCCAGCAAAACATAAAAGATCGTTATTATGGTGTAAA 539
Query 676 TGATCCAGTTGCTATGAAGTTGCTTGGCAAAGCTGGTGAGATGGGCACTTTGGAATCGCC 735
||||||||| || | |||||| | ||| ||||||||||||||||||||||||||| | ||
Sbjct 540 TGATCCAGTCGCGAAGAAGTTACATGGAAAAGCTGGTGAGATGGGCACTTTGGAACCACC 599
Query 736 AGACGATGAAAGCATCAAAACCCTTTACGTCGGTGGACTTAACTCGAGAATTCTCGAGCA 795
||| ||||||||||||||||| ||||| ||| |||||||||||||||| || ||||| ||
Sbjct 600 AGAGGATGAAAGCATCAAAACGCTTTATGTCCGTGGACTTAACTCGAGTATCCTCGAACA 659
Query 796 GGACATACGA-GACCAATTCTACGCTCATGGAG 827
||||||| | ||| || |||||||| ||||||
Sbjct 660 AGACATAC-ATGACAAACTCTACGCTTATGGAG 691
Score = 261 bits (141), Expect = 1e-68
Identities = 184/204 (90%), Gaps = 6/204 (3%)
Strand=Plus/Plus
Query 1074 TGCAGCAGTACTATATGCACCCACCACCAGCTAACCAAGACAAACCTTATTACCCATCAA 1133
||||||||||||||| ||||||||||||| |||||||| ||| ||||||| |||||||||
Sbjct 782 TGCAGCAGTACTATACGCACCCACCACCACCTAACCAATACAGACCTTATGACCCATCAA 841
Query 1134 TGGACCCACAGAGAATGGGTGCAGTCATTTCAACCCAAGAGGCTGGTGGTTCAAGCAC-- 1191
||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 842 TGGACCCGCAGAGAATGGGTGCAGTCATTTCAACCCAAGAGGGTGGTGGTTCAAGCACCA 901
Query 1192 -TGAGAACAACGGAGCTTCATCTTCTTCTTACATGATGCCTCCACACCAGTCATACCCAC 1250
|||||||||||||||||| | | |||||||| |||||||||||||||| || ||| |
Sbjct 902 GTGAGAACAACGGAGCTTC-T-T-CTTCTTACCCGATGCCTCCACACCAGCCAAACCTGC 958
Query 1251 CACCACCATATGGATATATGCCAT 1274
|||||||||||||||||||| |||
Sbjct 959 CACCACCATATGGATATATGACAT 982
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63344077435
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5