BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G07510.1
Length=2917
Score E
Sequences producing significant alignments: (Bits) Value
Ahg919477 jgi|Araly1|919477|scaffold_100758.1 3973 0.0
Ahg344684 jgi|Araly1|344684|fgenesh1_pg.C_scaffold_4001026 1899 0.0
> Ahg919477 jgi|Araly1|919477|scaffold_100758.1
Length=2482
Score = 3973 bits (2151), Expect = 0.0
Identities = 2371/2479 (96%), Gaps = 8/2479 (0%)
Strand=Plus/Plus
Query 298 CTGATTATCTGACAATGATATTCTCCAAGCTTGGTTCTTCCCTCGCTCGATCCTCACGTT 357
|||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct 7 CTGATTCTCTGACAATGATATTCTCCAAGCTTGGTTCTTCACTCGCTCGATCCTCTCGTT 66
Query 358 CTAAGGGATTTGTGTACGGCGGTGGTGTGAGATCGGCGGTATTT-AACCAAGGGAGGTTA 416
|||||||||| |||||||||||||||||| |||||||| | ||| |||||||||||| ||
Sbjct 67 CTAAGGGATTGGTGTACGGCGGTGGTGTGCGATCGGCGAT-TTTAAACCAAGGGAGGCTA 125
Query 417 CGAGCGCCGCAGAATCTCGAGGCGGCCGTCAATCAGGTGGATGGTGGATTAGGGTTTTTG 476
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 126 CGAGCGCCGCAGAATCTTGAGGCGGCCGTCAATCAGGTGGATGGTGGATTAGGGTTTCTG 185
Query 477 AGGCGGCACTTTGCTTCTTTTGCTGCTCGAAAGGGACTAGAAGCCGGTGATTTAAGCCGT 536
|||||||||||||||||||| |||||||| ||||||||||| |||||||||||||||||
Sbjct 186 AGGCGGCACTTTGCTTCTTTAGCTGCTCGGAAGGGACTAGATGCCGGTGATTTAAGCCGC 245
Query 537 GCTTTCGCTAACCCTAGATTGCGTCGGTTCTTTTCTAGTCAAACCCCAAAGAAGAAGAAT 596
| |||||||||||||||||||||||||||||||||||| |||| ||| ||||| ||||||
Sbjct 246 GTTTTCGCTAACCCTAGATTGCGTCGGTTCTTTTCTAGCCAAAGCCCGAAGAAAAAGAAT 305
Query 597 TATGAGAACTACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCTGAA 656
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 306 TATGAGAACTACTATCCAAAAGACAGTAAGAAAGCACCCAAGAATGAGCAGAAATCCGAA 365
Query 657 TCCAGAGATGGTTCAAAGAAAAATGAAAACGAAAATGCTGGGGACGCGTTCTCAAATGAA 716
||| |||| ||||||||||| ||||||||||| |||| ||||||| |||| | || |||
Sbjct 366 TCCGGAGAGGGTTCAAAGAAGAATGAAAACGAGAATGTTGGGGACATGTTCACCAAGGAA 425
Query 717 TATCAAAATATGTTAATTCCTCTTATGGCCATTGCTTTAATCCTTTCTACTTTCTCTCTT 776
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 426 TATCAAAATATGTTAATTCCTCTGATGGCCATTGCTTTAATCCTTTCTACTTTCTCTCTT 485
Query 777 GGTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTCGAGGCT 836
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 486 GGTTCCCGAGAACAGCAACAGATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTTGAGCCT 545
Query 837 GGTTTAGTGGATCACATAGATGTTTCCAATAAAGAAGTCGCAAAAGTCTATGTGAGGAGT 896
||| |||||||||||||||||||||| || ||| |||||| ||||||||||||||||||
Sbjct 546 GGTCTAGTGGATCACATAGATGTTTCTAACAAATCAGTCGCGAAAGTCTATGTGAGGAGT 605
Query 897 TCACC-AAAAAGCCAAACAACGGAAGAAGTTGTTCAAGGTCCTGGTAATGGAGTTCCTGC 955
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 606 TCACCGAAAAA-CCAAACAACGGAAGAAGTTGTTCAAGGTCCTGGTAATGGAGTTCCTGC 664
Query 956 TAAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGTGTTGAATCATTTGA 1015
||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 665 TAAAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGCGTTGAAACATTTGA 724
Query 1016 GGAGAAACTAGAAGAGGCCCAAGAAGCTATAGGCGTTAATTCTCATGACTTTGTTCCTGT 1075
||||||||| |||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct 725 GGAGAAACTTGAAGAGGCTCAAGAAGCGATAGGCGTTAATTCTCATGACTTTGTTCCTGT 784
Query 1076 CACCTACGTC-AGTGAAACT-ATCTGGTACCAGGAACTATTGAGATTTGCACCGACTTTA 1133
|||||||||| | |||| | ||||||||||||||| | ||||| |||||||||||||||
Sbjct 785 CACCTACGTCTCG-GAAA-TGATCTGGTACCAGGAAATGTTGAGGTTTGCACCGACTTTA 842
Query 1134 CTTCTCGTGGCTACGCTAATTTTTGGGGCAAGACGGATGCAAGGTGGACTGGGAGGTTTA 1193
|||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct 843 CTTCTCTTGGGTACGCTAATTTATGGGGCAAGACGGATGCAAGGTGGACTGGGAGGTGTA 902
Query 1194 GGCGGACCTGGTGGGAAGGCTGGCCGTGGAATTTTCAATATAGGGAAAGCTCAAATAACG 1253
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 903 GGCGGACCTGGTGGGAAGGGTGGCCGTGGAATTTTCAATATAGGGAAAGCTCAAATTACG 962
Query 1254 AGAGCAGATAAAAACTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGCGAGGAG 1313
|||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 963 AGAGCAGATAAAAATTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGTGAGGAG 1022
Query 1314 GCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGAAGAT 1373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1023 GCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGAAGAT 1082
Query 1374 TTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCCGGGACTGGAAAGACC 1433
|||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct 1083 TTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCAGGGACGGGAAAGACC 1142
Query 1434 CTTCTAGCAAAAGCTACTGCAGGAGAATCAGCTGTACCGTTTCTCTCAATATCTGGTTCA 1493
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 1143 CTTCTAGCAAAAGCTACTGCGGGAGAATCAGCTGTACCGTTTCTGTCAATATCTGGTTCA 1202
Query 1494 GATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAGAG 1553
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1203 GATTTCATGGAAATGTTTGTTGGTGTTGGACCTTCAAGAGTGAGAAACTTGTTTCAAGAG 1262
Query 1554 GCTAGACAGTGTGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCCGTGCG 1613
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1263 GCTAGACAATGTGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCCGTGCA 1322
Query 1614 AGGGGACGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATCAACTG 1673
|| || |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1323 AGAGGTCGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATCAGCTG 1382
Query 1674 CTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGACTAAC 1733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1383 CTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGACTAAC 1442
Query 1734 AGGCCAGATATTCTTGATAAAGCTTTATTACGGCCTGGCCGGTTTGATCGCCAGATAACC 1793
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1443 AGGCCAGATATTCTTGATAAAGCTTTATTACGACCTGGCCGGTTTGATCGCCAGATAACC 1502
Query 1794 ATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAGAAGATC 1853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1503 ATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAGAAGATC 1562
Query 1854 AAACTTGATCACGAGCCCTCATATTACTCACAAAGGCTTGCAGCCCTCACTCCCGGATTT 1913
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1563 AAACTTGATCACGAGCCCTCATATTACTCGCAAAGGCTTGCAGCCCTCACTCCCGGATTT 1622
Query 1914 GCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGACATGAA 1973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1623 GCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGACATGAA 1682
Query 1974 GGAGCAACAGTTACAATGGCGCACTTTGACTCTGCAATCGATCGTGTTATTGGTGGTCTG 2033
|||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||
Sbjct 1683 GGAGCAACAGTTACAATGGCACACTTTGACTCTGCAATTGATCGTGTTATTGGAGGTCTG 1742
Query 2034 GAGAAGAAAAACCGGGTAATAAGCAAGCTGGAGCGCCGTACAGTTGCATATCATGAATCT 2093
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1743 GAGAAGAAAAACCGGGTAATAAGCAAGCAGGAGCGCCGTACAGTTGCATATCATGAATCT 1802
Query 2094 GGCCATGCGGTTGCTGGGTGGTTCCTGGAACATGCGGAACCGTTGCTAAAGGTGACTATT 2153
||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1803 GGCCACGCGGTTGCTGGTTGGTTCCTGGAACATGCGGAACCATTGCTAAAGGTGACTATT 1862
Query 2154 GTTCCTCGTGGCACAGCAGCGCTCGGATTTGCCCAGTATGTTCCAAATGAAAACTTGCTC 2213
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1863 GTTCCTCGTGGCACAGCAGCGCTCGGGTTTGCCCAGTATGTTCCAAATGAAAACTTGCTC 1922
Query 2214 ATGACAAAAGAACAACTCTTTGATATGACTTGCATGACTCTCGGGGGCCGGGCAGCTGAA 2273
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1923 ATGACAAAAGAACAACTCTTTGACATGACTTGCATGACTCTCGGGGGCCGGGCAGCTGAA 1982
Query 2274 CAGGTATTGATTGGAAGAATATCCACTGGGGCTCAGAACGATCTGGAAAAGGTGACTAAG 2333
|||||||| || ||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 1983 CAGGTATTAATAGGAAGAATATCGACCGGGGCTCAGAACGATCTGGAAAAGGTGACTAAG 2042
Query 2334 ATGACTTATGCGCAAGTGGCAGTGTACGGATTCAGCGACAAGATAGGATTGCTTTCATTC 2393
|||||||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct 2043 ATGACTTACGCGCAAGTGGCGGTGTACGGATTCAGCGACAAGATAGGGTTGCTTTCATTC 2102
Query 2394 CCACAACGGGAAGACGAGTTCTCCAAGCCGTACAGCAACAGAACCGGTGCGATGATAGAT 2453
|| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2103 CCGCAACGGGAAGACGAGTTCTCCAAGCCGTACAGCAACAGAACTGGTGCGATGATAGAT 2162
Query 2454 GAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAGCGGACGGTTGAGCTGATAGAGGAA 2513
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct 2163 GAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAACGGACGGTTGAGCTGATCGAGGAA 2222
Query 2514 CACAAAGAGCAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAGAAGGAGGTTTTGCATCAG 2573
||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2223 CACAAAGAGGAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAGAAGGAGGTTCTGCATCAG 2282
Query 2574 GATGATCTCACTAAAGTATTGGGCGAGCGTCCGTTTAAGTCGGGTGAGACAACGAATTAC 2633
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 2283 GATGATCTTACTAAAGTATTGGGTGAGCGTCCATTTAAGTCGGGTGAGACAACGAATTAC 2342
Query 2634 GACAGGTTTAAATCTGGATTTGAAGAGTCGGAGAAGGAGAGCCAGAAGGAGTCTGTGCCG 2693
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2343 GACAGGTTTAAATCTGGATTTGAAGAGACGGAGAAGGAGAGCCAGAAGGAGTCTGTGCCG 2402
Query 2694 GTGAAGCCTGTGGAGGATGATGGAATTCCGCCTCTTGAGCCACAGGTAGTTCCGACGTAG 2753
|||||||||||||||||||||||| |||| || |||||||||||||| ||||||||||||
Sbjct 2403 GTGAAGCCTGTGGAGGATGATGGAGTTCCACCGCTTGAGCCACAGGTGGTTCCGACGTAG 2462
Query 2754 CTGTTGGAGACACCCAAAG 2772
|||||||||| |||||||
Sbjct 2463 ATGTTGGAGACTCCCAAAG 2481
> Ahg344684 jgi|Araly1|344684|fgenesh1_pg.C_scaffold_4001026
Length=2457
Score = 1899 bits (1028), Expect = 0.0
Identities = 1957/2395 (82%), Gaps = 106/2395 (4%)
Strand=Plus/Plus
Query 340 TCGCTCGATCCTCACGTTCTAA-GGGATTTGTGTACGGCGGTGGTGTGAGATCGGCGGTA 398
|||||| || || ||||| || ||| ||| ||||||| |||||||| |||||||||||
Sbjct 24 TCGCTCCAT-TTCTCGTTC-AAGGGGGTTTTTGTACGGTGGTGGTGTTAGATCGGCGGT- 80
Query 399 TTTAACCAAGG-GAGGTTACGAGCGCCG-CAGAATCTCGAGGCGGC--C-GTCAATCAGG 453
|||| | ||| ||| ||| || || ||| ||| |||||||| | || ||||| |
Sbjct 81 GTTAAACGAGGCAAGGCTACTTGCTTCGCCAG-GTCTTGAGGCGGCGTCTGTGAATCAAG 139
Query 454 TGGATGGTGGATTAGGGTTTTTGAGGCGGCACTTTGCTTCTTTTGCTGCTCGAAAGGGAC 513
|||| ||||||||||||||| | || | |||||||||||||| ||| | || |||||
Sbjct 140 TGGAAGGTGGATTAGGGTTTATAAGAAGACACTTTGCTTCTTTAGCTTCACGGAAGGGTT 199
Query 514 TAG--AAGCCGGTGATTTAAGCCGTGCTTTCGCTAA-CCCTAGATTGCGTCGGTTCTTTT 570
||| || |||||| | ||| ||| ||||| || ||||| ||||| ||||| |
Sbjct 200 TAGTCAA--TAATGATTTGATTGGTGTTTTTGCTAATCCAAAGATT-CGTCGATTCTTCT 256
Query 571 CTAG-TCAAACCCCAAAGAAGAAGAATTATGAGAACTACTATCCAAAAGACAGTAAGAAA 629
|| | | || | || ||||||||||||||||||||||| | ||| ||||| | ||| ||
Sbjct 257 CT-GATGAAGCTCCTAAGAAGAAGAATTATGAGAACTATTTTCCTAAAGATACAAAGCAA 315
Query 630 GCACCCAAGAATGAGCAGAAATCTGAATC-CAGAGATGGTTCAAAGAAAAATGAAAACGA 688
| |||||||| ||| |||||||| | | | | ||| |||||| |||| |||||||| ||
Sbjct 316 GAACCCAAGAGTGATCAGAAATCAG-AGCATAAAGAGGGTTCAGAGAAGAATGAAAATGA 374
Query 689 AAATGCTGGG-GACGCGTTC-TCAAAT-GAATAT-CAAAATATGTTAATTCCTCTTA-TG 743
|| | |||| || |||| | ||| | || | |||||| || | ||||||| || |
Sbjct 375 GAACG-TGGGAGATATGTTCAT-GAATCG-AT-TCCAAAATTTGCTGATTCCTC-TATTA 429
Query 744 GC-CATTGCTTTAATCCTTTCTACTTTCTC---T--CT-TGGTTCCCGAGAACA-GC-AA 794
|| | ||||| | || ||||| ||||||| | || ||| || | |||| || ||
Sbjct 430 GCTC-TTGCTGTGTTCTTTTCTTCTTTCTCGTTTGGCTCTGGGGACCAACAACAGGCAAA 488
Query 795 -------C-A--GATTAGTTTCCAGGAGTTCAAAAACAAGCTCCTCGAGGCTGGTTTAGT 844
| | ||||||||||||||||||||||||||||| |||||| | ||| ||||
Sbjct 489 TGTGGTTCTACTTATTAGTTTCCAGGAGTTCAAAAACAAGCTTCTCGAGCCAGGTCTAGT 548
Query 845 GGATCACATAGATGTTTCCAATAAAGAAGTCGCAAAAGTCTATGTGAGGAGTTCACCAAA 904
|| ||||||||||||| || ||| ||| |||||||||||||||||||| ||||| |
Sbjct 549 TGACCACATAGATGTTTTAAACAAATCAGTAGCAAAAGTCTATGTGAGGAGCTCACC-GA 607
Query 905 AAG-CCAAAC-AACGGAA--GAAGTTGTTCAAGGTC-CTGGTAATGG-AGTTCCTGCT-A 957
||| || ||| ||| || || ||||| || || | ||||||||| | | |||||| |
Sbjct 608 AAGACC-AACAAAC--AACTGACGTTGTCCATGG-CAATGGTAATGGTA-TACCTGCTAA 662
Query 958 AAGGACGTGGTGGTCAGTATAAGTACTACTTTAATATTGGTAGTGTTGAATCATTTGAGG 1017
||| || ||||||||||||||||||||||| ||||| ||||||||||| || |||||||
Sbjct 663 AAGAAC-AGGTGGTCAGTATAAGTACTACTTCAATATCGGTAGTGTTGATTCTTTTGAGG 721
Query 1018 AGAAACTAGAAGAGGCCCAAGAAGCTATAGGCGTTAATTC-TCATGACTTTGTTCCTGTC 1076
||||||| ||||| || |||||||| |||| ||| | || |||||| | ||||||||||
Sbjct 722 AGAAACTCGAAGAAGCTCAAGAAGCGCTAGGTGTTGA-TCGTCATGAATATGTTCCTGTC 780
Query 1077 ACCTACGTCAGTGAAACT-ATCTGGTACCAGGAACT-ATTGAGATTTGCACCGACTTTAC 1134
|| || ||| ||||| | ||||||| || || | | |||| |||||||||||||||
Sbjct 781 ACATATGTCTCTGAAA-TGGTCTGGTATCAAGAGTTCA-TGAGGTTTGCACCGACTTTA- 837
Query 1135 TT-CTCGTGGCTACGCTAATTTTTGGGGCAAGACGGATGCAAGGTGGACTGGGAGGTTTA 1193
|| ||| ||| ||| || || | |||||| |||||||||||||||||| | | ||| ||
Sbjct 838 TTGCTCTTGGGTACTCTTATCTATGGGGCGAGACGGATGCAAGGTGGA-T-TG-GGTGTA 894
Query 1194 GGCGG-ACCTGGTGGGAAGGCTGGCCGTGGAATTTTCAATATAGGGAAAGCTCA-AATAA 1251
|| || ||| || || ||| ||| |||||||||||||||||||| ||||| || |||||
Sbjct 895 GGAGGAACC-GGCGGTAAGAATGGTCGTGGAATTTTCAATATAGGCAAAGC-CACAATAA 952
Query 1252 CGAGAGCAGATAAAAACTCCAAGAATAAGATATATTTTAAAGATGTTGCGGGATGCGAGG 1311
||||| |||||| | |||||||||||||| |||||||| |||||||| ||||| || |
Sbjct 953 TAAGAGCGGATAAACATTCCAAGAATAAGATTTATTTTAAGGATGTTGCTGGATGTGATG 1012
Query 1312 AGGCTAAACAAGAAATTATGGAATTTGTGCATTTCCTTCAGAACCCAAAGAAATATGAAG 1371
|||||||||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||
Sbjct 1013 AGGCTAAACAAGAAATTATGGAGTTTGTACATTTCCTTAAGAACCCAAAGAAGTATGAAG 1072
Query 1372 ATTTGGGAGCTAAAATCCCAAAAGGTGCGCTTTTAGTTGGCCCACCCGGGACTGGAAAGA 1431
||||||| |||||||| || ||||| || |||||||| || || || || || |||||||
Sbjct 1073 ATTTGGGTGCTAAAATTCCGAAAGGGGCACTTTTAGTCGGTCCGCCTGGAACCGGAAAGA 1132
Query 1432 CCCTTCTAGCAAAAGCTACTGCAGGAGAATCAGCTGTACCGTTTCTCTCAATATCTGGTT 1491
||||| |||||||||| || || |||||||| | ||| || ||||| || || ||||| |
Sbjct 1133 CCCTTTTAGCAAAAGCCACAGCGGGAGAATCGGGTGTGCCATTTCTGTCTATTTCTGGCT 1192
Query 1492 CAGATTTCATGGAGATGTTTGTTGGTGTTGGACCTTCCAGAGTGAGAAACTTGTTTCAAG 1551
||||||||||||||||||||||||||||||| ||||| || |||||| | ||||| ||||
Sbjct 1193 CAGATTTCATGGAGATGTTTGTTGGTGTTGGGCCTTCGAGGGTGAGACATTTGTTCCAAG 1252
Query 1552 AGGCTAGAC-AGTGTGCACCTAGCATAATATTTATTGATGAGATCGATGCGATTGGCCGT 1610
|||| |||| || |||||| ||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1253 AGGCAAGACAAG-CTGCACCGAGCATTATATTTATAGATGAGATTGATGCGATTGGTCGG 1311
Query 1611 GCGAGGGGACGTGGAGGTTTCTCTGGTGGAAATGATGAGCGTGAAAGCACACTTAATCAA 1670
|| || || |||||||| || | || || || ||||||||||||||||| || |||||
Sbjct 1312 GCAAGAGGTCGTGGAGG-TT-T-AGGCGGTAACGATGAGCGTGAAAGCACTCTGAATCAG 1368
Query 1671 CTGCTAGTTGAAATGGATGGATTTGGTACTACCGCTGGAGTTGTCGTCCTTGCTGGGACT 1730
|||||||||||||||| || |||||||| |||||||||||||| || |||||||||||
Sbjct 1369 TTGCTAGTTGAAATGGACGGTTTTGGTACAACCGCTGGAGTTGTGGTTCTTGCTGGGACC 1428
Query 1731 AACAGGCCAGATATTCTT-GATAAAGCTTTATTACGGCCTGGCCGGTTTGATCGCCAGAT 1789
||||| || |||||| || ||||||||||| ||| |||||||||| ||||||||||||||
Sbjct 1429 AACAGACCGGATATT-TTGGATAAAGCTTTGTTAAGGCCTGGCCGTTTTGATCGCCAGAT 1487
Query 1790 AACCATAGATAAACCTGATATTAAAGGCCGTGATCAGATATTCCAGATATACCTGAAGAA 1849
|||||| |||||||||||||||||||| ||||||||||| |||||||| ||| |||||||
Sbjct 1488 AACCATTGATAAACCTGATATTAAAGGGCGTGATCAGATTTTCCAGATTTACTTGAAGAA 1547
Query 1850 GATCAAACTTGATCACGAGCCCTCATATTACTCACAAAGGCTTGCAGCCCTCACTCCCGG 1909
||||||||||||||| ||||| ||||||||||| ||||||||||| || |||||||||||
Sbjct 1548 GATCAAACTTGATCATGAGCCATCATATTACTCTCAAAGGCTTGCGGCTCTCACTCCCGG 1607
Query 1910 ATTTGCTGGAGCTGACATTGCGAATGTCTGTAACGAGGCGGCTCTTATTGCTGCCAGACA 1969
|||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||
Sbjct 1608 ATTTGCTGGAGCTGACATTGCGAATGTCTGTAACGAAGCAGCTCTTATTGCTGCTAGACA 1667
Query 1970 TGAAGGAGCAACAGTTACAATGGCGCACTTTGACTCTGCAATCGATCGTGTTATTGGTGG 2029
||||||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct 1668 CGAAGGAGCAACGGTTACAATGGCACACTTTGAATCTGCAATTGATCGTGTTATTGGTGG 1727
Query 2030 TCTGGAGAAGAAAAACCGGGTAATAAGCAAGCTGGAGCGCCGTACAGTTGCATATCATGA 2089
||| ||||||||||||||||| ||||||||| ||||||| ||||| ||||||||||||||
Sbjct 1728 TCTTGAGAAGAAAAACCGGGTGATAAGCAAGTTGGAGCGACGTACGGTTGCATATCATGA 1787
Query 2090 ATCTGGCCATGCGGTTGCTGGG-TGGTTCCTGGAACATGCGGAACCGTTGCT-AAAGGTG 2147
|||||| ||||| |||| | || |||||||| |||||||| || |||||||| |||| ||
Sbjct 1788 ATCTGGGCATGCAGTTG-TAGGATGGTTCCTCGAACATGCAGAGCCGTTGCTGAAAG-TG 1845
Query 2148 ACTATTGTTCCTCGTGGCACAGCAGCGCTCGGATTTGCCCAGTATGTTCCAAATGAAAAC 2207
|||||||| || ||||||||||| || ||||||||||| || ||||||||||| ||||||
Sbjct 1846 ACTATTGTACCACGTGGCACAGCGGCTCTCGGATTTGCACAATATGTTCCAAACGAAAAC 1905
Query 2208 -TTGCTCATGACAAAAGAACAACTCTTTGATATGACTTGCATGACTCTCGGGGGCCGGGC 2266
|| |||||||| ||||| ||||||||||| |||||||||||||| ||||| ||||| ||
Sbjct 1906 CTT-CTCATGACCAAAGAGCAACTCTTTGACATGACTTGCATGACCCTCGGTGGCCGTGC 1964
Query 2267 AGCTGAACAGGTATTGATTGG-AAGAATATCCACTGGG-GCTCAGAACGATCTGGAAAAG 2324
|||||| ||||||||||| || || ||| || || ||| || ||||||||||| || |||
Sbjct 1965 AGCTGAGCAGGTATTGATAGGTAA-AATCTCAAC-GGGTGCGCAGAACGATCTAGAGAAG 2022
Query 2325 GTGACTAAGATGACTTATGCGCAAGTGGCAGTGTACGGATTCAGCGACAAGATAGGATTG 2384
||||| |||||||| ||||||||||| || || ||||| ||||| |||||| | || ||
Sbjct 2023 GTGACAAAGATGACGTATGCGCAAGTAGCTGTATACGGTTTCAGTGACAAGGTTGGCCTG 2082
Query 2385 CTTTCATT-CCCACAACGGGA--A-G---ACGAGTTCTCCAAGCCGTACAGCAACAGAAC 2437
|| || || ||| ||| |||| | | |||| ||||| || || |||||||||| |||
Sbjct 2083 CTCTCGTTTCCCCCAA-GGGATGATGGCTACGACTTCTCTAAACCATACAGCAACAAAAC 2141
Query 2438 CGGTGCGATGATAGATGAAGAGGTCCGAGAATGGGTGGGGAAAGCTTACAAGCGGACGGT 2497
|| || || ||||| ||||| || | |||||||||| |||||||| ||||||| ||
Sbjct 2142 AGGCGCTATCATAGACGAAGAAGTTAGGGAATGGGTGGCCAAAGCTTATGAGCGGACCGT 2201
Query 2498 TGAGCTGATAGAGGAACACAAAGAGCAAGTGGCTCAGATCGCTGAGCTCTTGCTAGAGAA 2557
|||||| | ||||||||||||||| |||||||||||||||| ||||| || ||||||||
Sbjct 2202 AGAGCTGGTTGAGGAACACAAAGAGAAAGTGGCTCAGATCGCCGAGCTTTTACTAGAGAA 2261
Query 2558 GGAGGTTTTGCATCAGGATGATCTCACTAAA-GTATTGGGCGAGCGTCCGTTTAAGTCGG 2616
||||| |||||||||||||||||| |||| || || || || ||||| |||||||| |
Sbjct 2262 AGAGGTGTTGCATCAGGATGATCTCT-TAAAAGTTTTAGGTGAACGTCCATTTAAGTCCG 2320
Query 2617 GTGAGACAACGAATTACGACAGGTTTAAATCTGGATTTGAAGAGTCGGAGAAGGA 2671
|||| || ||||| ||| |||| || ||||| ||||| ||| | ||||||||
Sbjct 2321 CTGAGGTGACTAATTATGACCGGTTCAAGTCTGGGTTTGAGGAGACTGAGAAGGA 2375
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 110118898295
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5