BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G07650.2
Length=3231
Score E
Sequences producing significant alignments: (Bits) Value
Ahg470791 jgi|Araly1|470791|fgenesh2_kg.1__745__AT1G07650.1 4896 0.0
Ahg916651 jgi|Araly1|916651|Al_scaffold_0008_1402 1131 0.0
Ahg898471 jgi|Araly1|898471|Al_scaffold_0005_2437 1103 0.0
> Ahg470791 jgi|Araly1|470791|fgenesh2_kg.1__745__AT1G07650.1
Length=3334
Score = 4896 bits (2651), Expect = 0.0
Identities = 3047/3235 (94%), Gaps = 40/3235 (1%)
Strand=Plus/Plus
Query 1 ATTTTATTATTTTGTATAGAAAAAATGATATATTTACATCGCATATATTTCATCATCGTC 60
|||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||||
Sbjct 95 ATTTTATTGTTTTGTATAGAAAAGATGATTTCCTTACATCGCATATATTTCATCATCGTC 154
Query 61 CTCTTCACACTAATTTTCCATGGGCGTCTTGGTTTTTCCGACAACAATAAACTTCACGAG 120
| |||||||||| || |||||| |||||||| |||||||||| || |||||| ||||||
Sbjct 155 TTATTCACACTAACTTCCCATGGCCGTCTTGGATTTTCCGACAGCACTAAACTCCACGAG 214
Query 121 GCCGAAGTGAGGGCATTAAAGGAGATAGGGAAGAAGCTAGGGAAGAAAGATTGGGACTTC 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 215 GCCGAAGTGAGGGCATTAAAGGAGATAGGGAAGAAGCTAGGGAAGAAAGATTGGAACTTC 274
Query 181 AACAAAGATCCATGTAGTGGTGAAGGCACTTGGATTGTAACAACTTACACAACCAAAGGG 240
|||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
Sbjct 275 AACAAAGATCCATGTAGTGGTGAAGGCAATTGGGTTGTAACAACTTACACAACCAAAGAG 334
Query 241 TTTGAGAGTAATATCACTTGTGATTGCTCCTTTCTTCCTCAAAACTCTTCTTGCCACGTC 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 335 TTTGAGAGTAATATCACTTGTGATTGCTCCTTTCTTCCTCCAAACTCTTCTTGCCACGTC 394
Query 301 ATTAGAATTGGCAATTTGGTTGGCAGAGCTCTGAAGTCGCAGAACTTAACAGGCATTGTC 360
||| | | || | ||||||||||||||||||||||||||||||||||
Sbjct 395 ATT---A---G-AA------T-----AGCTCTGAAGTCGCAGAACTTAACAGGCATTGTC 436
Query 361 CCTCCAGAATTCTCTAAGCTTCGTCACCTTAAAGTTTTAGACCTAAGCCGTAACTCTCTG 420
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||
Sbjct 437 CCTCCAGAATTCTCTAAGCTTCGCCACCTTAAAGTTTTAGACCTTAGCCGTAACTCCCTG 496
Query 421 ACTGGTTCCATTCCAAAGGAATGGGCTTCTATGCGCTTGGAAGATTTATCTTTCATGGGG 480
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 497 ACTGGTTCCATTCCAAAGGAATGGGCTTCGATGCGCTTGGAAGATTTATCCTTCATGGGG 556
Query 481 AACCGATTGTCTGGTCCGTTTCCGAAAGTCCTGACCCGCCTTACAATGCTCAGAAACTTG 540
||||||||||||||||| |||||||||||||| || |||||||||||||||| |||||||
Sbjct 557 AACCGATTGTCTGGTCCATTTCCGAAAGTCCTAACTCGCCTTACAATGCTCAAAAACTTG 616
Query 541 AGCCTAGAAGGAAATCAGTTTTCAGGACCAATCCCTCCTGATATTGGACAGTTGGTTCAT 600
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct 617 AGCCTAGAAGGAAATCAGTTTTCAGGACCAATCCCTCCTGATATTGGAAAGTTAGTTCAT 676
Query 601 TTGGAGAAACTTCATCTCCCTTCAAATGCTTTCACTGGTCCATTGACTGAAAAACTTGGA 660
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 677 TTGGAGAAACTTCATCTTCCTTCAAATGCTTTCACTGGTCCATTGACTGAAAAACTTGGA 736
Query 661 TTGCTCAAGAACCTGACTGATATGAGGATAAGTGATAATAATTTCACTGGACCAATACCA 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 TTGCTCAAGAACCTGACTGATATGAGGATAAGTGATAATAATTTCACTGGACCAATACCA 796
Query 721 GATTTCATCAGCAATTGGACAAGAATACTGAAACTGCAGATGCATGGTTGCGGTTTGGAT 780
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 797 GATTTCATCGGCAATTGGACAAGAATAATGAAACTGCAGATGCATGGTTGCGGTTTGGAT 856
Query 781 GGTCCGATACCTTCCAGTATTTCTAGCTTAACAAGCTTGACCGACCTGAGAATTAGCGAC 840
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 857 GGTCCGATACCTTCCAGTATTTCTACCTTAACAAGCTTGACCGACCTGAGGATTAGCGAC 916
Query 841 TTAGGAGGCAAACCGTCTTCCTTCCCCCCACT-GAAGAATTTGGAATCTATCAAGACGCT 899
|||||||||||||||||||||||||| | | | |||||||||||| ||||||||||||||
Sbjct 917 TTAGGAGGCAAACCGTCTTCCTTCCCTC-AGTTGAAGAATTTGGAGTCTATCAAGACGCT 975
Query 900 GATACTGAGAAAATGCAAAATAATTGGCCCAATTCCAAAATATATTGGGGACT-TGAAGA 958
|||||||||||||||||| ||| ||||||||||||||||||||||||||| | ||||||
Sbjct 976 GATACTGAGAAAATGCAATTTAAATGGCCCAATTCCAAAATATATTGGGGA-TATGAAGA 1034
Query 959 AGCTCAAAACACTTGACCTCAGTTTTAATCTCCTAAGTGGTGAGATTCCTTCATCGTTTG 1018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1035 AGCTCAAAACACTTGACCTCAGTTTTAATCTCCTAAGTGGTGAGATTCCTTCATCGTTTG 1094
Query 1019 AAAATATGAAGAAAGCCGATTTCATTTATTTGACAGGAAACAAATTGACAGGAGGGGTTC 1078
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1095 AAAATATGAAGAAAGCTGATTTCATTTATTTGACAGGAAACAAATTGACAGGAGGTGTTC 1154
Query 1079 CAAACTACTTTGTCGAAAGAAATAAAAATGTAGATGTTTCTTTTAATAACTTCACCGATG 1138
|||||||||||||||||||||| ||||||||||||||||||||||||||||| || ||||
Sbjct 1155 CAAACTACTTTGTCGAAAGAAACAAAAATGTAGATGTTTCTTTTAATAACTTTACTGATG 1214
Query 1139 AAAGTTCAATTCCTAGCCATG---ACTGTAACCGAGTTACTTCAAATTTGGTGGAAAGCT 1195
||||||||||||| | ||| | ||||||||||||| || ||| |||||||| |||
Sbjct 1215 AAAGTTCAATTCCCAAAAATGGTGATTGTAACCGAGTTAGTTTTAATATGGTGGAAGGCT 1274
Query 1196 TCGCCTTGGGGAACAAATCACACAAGGGTTCAACCTGTTTTCTTCAACGCATGCCTTGTG 1255
|||||||| ||||| ||||||||| |||||||||||||||||| | | | |||||||
Sbjct 1275 TCGCCTTG---AACAAGTCACACAAGAATTCAACCTGTTTTCTTCAGCACTTCCCTTGTG 1331
Query 1256 TTCATCCTAAGAGATATCATTTATATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAA 1315
|||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1332 TTCATCCTAAGAGACATCATATGTATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAA 1391
Query 1316 AAGTGGATAAAGAAATAACATATCAGGCTGATGACGAACCCAAAGGTGCTTCTATGTACG 1375
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1392 AAGTGGATAAAGGAATAACATATCAGGCTGATGACGAACCCAAAGGTGCTTCTATGTACG 1451
Query 1376 TCCTTGGCGCTAACAAGCGCTGGGCGTTGAGCAGCACCGGGAACTTCATGGACAATGATG 1435
|||||||| || || |||||||||||||||||||||||||||||||||||||||||
Sbjct 1452 TCCTTGGC---AA---GCACTGGGCGTTGAGCAGCACCGGGAACTTCATGGACAATGATG 1505
Query 1436 ACGATGCTGATGAGTATACTGTGCAGAACACATCCAGGTTATCAGTTAATGCTTCCTCTC 1495
||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1506 ACGATGCTGATGATTATACTGTGCAGAACACATCCAGGCTATCAGTTAATGCTTCCTCTC 1565
Query 1496 CCAGCTTTGGACTTTATAGGACAGCTCGAGTCTCTCCTTTATCGTTGACTTACTACGGAA 1555
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 1566 CCAGCTTTGGACTTTATAGGACTGCTCGAGTCTCTCCTTTATCGTTGACTTACTATGGAC 1625
Query 1556 TCTGTCTTGGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTTACCG 1615
| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 1626 TTTGTCTCGGAAATGGGAACTACACTGTGAATCTCCACTTCGCTGAGATCATCTTTACTG 1685
Query 1616 ATGACAATACA-TTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGATCAG 1674
||||||| ||| || ||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1686 ATGACAACACACTT-TACAGTCTCGGCAAACGTTTGTTCGATATTTATGTTCAGGATCAG 1744
Query 1675 TTGGTGATTAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAATCATT 1734
|| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||
Sbjct 1745 TTAGTGATTAAAAACTTTAACATTCAAGAAGCAGCTCGAGGATCAGGTAAGCCAGTCATA 1804
Query 1735 AAATCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGGCTGGC 1794
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1805 AAATCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATCGGTTTGCGATGGGCTGGC 1864
Query 1795 AAAGGGACAACAGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCTATATCT 1854
||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct 1865 AAAGGAACAACAGGCATTCCAATTAGAGGAGTATATGGTCCTATGATTTCAGCTATATCT 1924
Query 1855 GTGGAACCCAATTTCAAACCTCCGGTATATTATGACACAAAGGATATCATACTAAAAGTG 1914
||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct 1925 GTGGAACCCAATTTCAAACCTCCGGTATATTATGACATAAAGGGTATCATACTAAAAGCG 1984
Query 1915 GGGGTACCTGTCGCTGCAGCAACACTTCTTTTGTTTATCATAGTGGGTGTATTCTGGaaa 1974
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1985 GGGGTACCTGTTGCTGCAGCAACACTTCTTTTGTTTATCATAGTGGGTGTATTCTTGAAA 2044
Query 1975 aaaaGGCGTGACAAAAATGATATTGACAAAGAGCTAAGGGGTCTAGATCTTCAAACTGGA 2034
||||| ||||||||||||| |||||| |||||| |||||||| |||||||||||||||||
Sbjct 2045 AAAAGACGTGACAAAAATGCTATTGATAAAGAGTTAAGGGGTTTAGATCTTCAAACTGGA 2104
Query 2035 ACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAATTTCGATGTAACAAGAAAGATT 2094
|||||||||||||| |||||||||||||||||||| ||||| |||||||||| |||||||
Sbjct 2105 ACTTTTACTCTACGACAGATAAAAGCAGCCACTGACAATTTTGATGTAACAAAAAAGATT 2164
Query 2095 GGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGAAATTAATTGCA 2154
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2165 GGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGAAATTAATCGCA 2224
Query 2155 GTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAATGAGATAGGA 2214
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2225 GTTAAACAGCTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAATGAGATAGGA 2284
Query 2215 ATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCTATATGGATGTTGTGTTGAAGGA 2274
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2285 ATGATCTCAGCTCTTCAACATCCAAATCTTGTGAAGCTATATGGATGTTGTGTTGAAGGA 2344
Query 2275 AACCAATTGATATTGGTGTATGAGTACTTGGAGAACAACTGTCTATCTCGAGCGTTATTT 2334
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||
Sbjct 2345 AACCAATTGATATTGGTGTATGAGTATTTGGAGAACAACTGTCTATCTCGTGCGCTATTT 2404
Query 2335 GGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGAAGAtttttttG 2394
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2405 GGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGAAGATATTTTTG 2464
Query 2395 GGGATAGCCAAGGGACTGACATTTCTCCATGAAGAATCTAGGATAAAGATTGTACACAGA 2454
|||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2465 GGGATAGCTAAAGGACTGACATTTCTCCATGAAGAATCTAGGATAAAGATTGTACACAGA 2524
Query 2455 GATATAAAGGCAAGCAATGTGTTACTCGATAAGGATCTCAACGCTAAAATTTCTGACTTT 2514
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 2525 GATATAAAGGCAAGCAACGTGTTACTCGATAAGGATCTCAACGCTAAAATTTCTGACTTT 2584
Query 2515 GGTTTGGCAAAGCTGAATGATGATGGAAACACACACATCAGCACTCGTATTGCAGGAACT 2574
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 2585 GGTTTGGCAAAGCTGAACGATGATGGAAATACACACATCAGCACTCGTATTGCAGGAACT 2644
Query 2575 ATAGGTTATATGGCTCCTGAATATGCAATGCGTGGTTACTTGACTGAAAAAGCGGATGTT 2634
||||||||||||||||| || ||||| |||||||| ||| ||||||||||||||||||||
Sbjct 2645 ATAGGTTATATGGCTCCCGAGTATGCGATGCGTGGCTACCTGACTGAAAAAGCGGATGTT 2704
Query 2635 TATAGCTTCGGCGTCGTTGCACTCGAAATCGTTAGTGGAAAGAGTAACACAAACTTTAGG 2694
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2705 TATAGCTTTGGCGTCGTTGCACTCGAAATCGTGAGTGGAAAGAGTAACACAAACTTTAGG 2764
Query 2695 CCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGCAAGAGAGAGGAAGC 2754
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2765 CCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGCAAGAGAGGGGAAGC 2824
Query 2755 TTACTAGAGCTGGTTGATCCAACGTTAGCCTCAGATTACTCAGAAGAGGAAGCCATGTTG 2814
|||||||||||||||||||||||||||| |||| ||||||||||||||||||||||| ||
Sbjct 2825 TTACTAGAGCTGGTTGATCCAACGTTAGTCTCAAATTACTCAGAAGAGGAAGCCATGCTG 2884
Query 2815 ATGCTGAACGTGGCATTGATGTGCACTAACGCATCACCGACTCTAAGGCCTACAATGTCG 2874
|||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||
Sbjct 2885 ATGCTGAACGTGGCATTGATGTGCACTAGCGCGTCACCGACGCTAAGGCCTACAATGTCA 2944
Query 2875 CAGGTGGTGAGTCTCATAGAGGGGAAGACAGCGATGCAAGAGTTGCTGTCGGATCCGAGC 2934
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2945 CAGGTGGTGAGTCTCTTAGAGGGAAAGACAGCGATGCAAGAGTTGCTGTCGGATCCGAGC 3004
Query 2935 TTCTCAACGGTTAACCCGAAGCTTAAAGCCTTGAGGAACCATTTTTGGCAAAACGAGCTG 2994
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3005 TTCTCAACGGTTAACCCGAAGCTTAAAGCCTTAAGGAACCATTTTTGGCAAAACGAGCTG 3064
Query 2995 AGCAGATCGCTTAGCTTCTCCACAAGCGGGCCTCGTACTGCCTCTGCTAACTCACTCGTT 3054
|||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 3065 AGCAGATCACTTAGCTTCTCCACAAGCGGGCCTCGTACTGGCTCTGCTAACTCACTCGTT 3124
Query 3055 GATGCAGAGGAGAAAACCGGACTTTTGGATTAAGTTCTTAAAATTCCAAATTT-TTAGTG 3113
||||| ||||||||||| |||||||||||||| ||||||||||||||||| ||||||
Sbjct 3125 GATGCTGAGGAGAAAACTGGACTTTTGGATTAGGTTCTTAAAATTCCAAAAAAATTAGTG 3184
Query 3114 AAATTCGCGAGAGTAATGAAGTTTTCACCAATGAAAA-GAGTTTGCTTTTAAGTGTATAT 3172
| ||||| | |||| |||||||||||||||| |||| ||||||||||| ||||||||||
Sbjct 3185 AGATTCGTGGGAGTGGTGAAGTTTTCACCAATAAAAAAGAGTTTGCTTTCAAGTGTATAT 3244
Query 3173 ATAGTTGGAAGTTCTTTAGCTCAAAATAGTGTTATATGAACTAA-AGTGATCTCA 3226
|||||||||||||||||||||| |||||||||||||||||| || | ||||||||
Sbjct 3245 ATAGTTGGAAGTTCTTTAGCTCGAAATAGTGTTATATGAAC-AAGATTGATCTCA 3298
> Ahg916651 jgi|Araly1|916651|Al_scaffold_0008_1402
Length=2856
Score = 1131 bits (612), Expect = 0.0
Identities = 1367/1722 (79%), Gaps = 90/1722 (5%)
Strand=Plus/Plus
Query 1278 ATATAAATTGTACATAAATTGCGGAGGAGGTGAAGTAAAAGTGGATAAAGAAATA-ACAT 1336
|||||| |||||||||| || || |||| |||| ||||||| |||||||||| | ||||
Sbjct 1050 ATATAAGCTGTACATAAACTGTGGGGGAGATGAAATAAAAGTTGATAAAGAAA-AGACAT 1108
Query 1337 ATC-AGGCTGATGA-CGA-ACCCAAAGGTGCTTCTATGTACGTCCT-TGGCGCTAACAAG 1392
| | | ||| | | || || || | || ||| | || || |||| || |||||
Sbjct 1109 A-CGAAGCT-AACATAGAGGGCC-AACGACCTACTACATTTGT-CTATGGCTCTGACAAG 1164
Query 1393 CGCTGGGCGTTGAGCAGCACCGGGA-ACTTCATGGACAATGA--TGAC-GATGCT-GATG 1447
| |||||| || || |||||| ||| ||||||| | ||||| | || || | | ||||
Sbjct 1165 CACTGGGCATTTAGTAGCACC-GGACACTTCAT-G--AATGATCTTACAGAAG-TGGATG 1219
Query 1448 AGTATACTGTG-CAGAACACATCCAGGTTATCAGTTAATGCTTCCTCTCCCAGCTTT-G- 1504
| || || ||| | ||||| || | ||| || |||||||| ||||| || ||| |
Sbjct 1220 ACTACACCGTGTC-TAACACCTCTACACTATTAGCCAATGCTTCTTCTCCAAG-TTTCGT 1277
Query 1505 GACTTTATAGGACAGCTC-GAGTCTCTCCTTTATCGTTGACTTACTACGGAATCTGTCTT 1563
| ||||| | ||| |||| || | |||||| | | |||||||||||||||| |||||||
Sbjct 1278 G-CTTTACAAGACGGCTCGGA-TTTCTCCTCTCTTGTTGACTTACTACGGACTCTGTCTG 1335
Query 1564 GGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTTACCGA-TGACAA 1622
|| |||||| | |||||||||| ||||||||| || ||||| || |||||| | ||||
Sbjct 1336 GGCAATGGGGAGTACACTGTGAGTCTCCACTTCGCAGAGATAATATTTACC-AGCGACAG 1394
Query 1623 TACATTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGATCAGTTGGTGAT 1682
|||||| |||||||| |||||||| | || ||||||||||||||||| ||||| ||||
Sbjct 1395 TACATTCTACAGTCTTGGCAAACGAGTCTTCGATATTTATGTTCAGGAGAAGTTGATGAT 1454
Query 1683 TAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAATCATTAAA-TCGT 1741
||||||||| |||||| ||||||||||| | ||||| || |||||||||| |||| | |
Sbjct 1455 TAAAAACTTCAACATTAAAGAAGCTGCTGGTGGATCGGGCAAGCCAATCA-TAAAGACAT 1513
Query 1742 TTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGGCTGGCAAAGGGA 1801
|| ||||||||||||| | || | ||||||||| | ||| | ||||||||||||||||
Sbjct 1514 TTGTGGTAAATGTAACAAATCACATTCTGAAGATCAGCTTGAGGTGGGCTGGCAAAGGGA 1573
Query 1802 CAAC-AGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCTATATCTGTGGAA 1860
|||| | || |||| |||||||| || ||||| || ||||| ||||||||||| || |||
Sbjct 1574 CAACTACGC-TTCCAATTAGAGGAGTTTATGGCCCAATGATCTCAGCTATATCAGTTGAA 1632
Query 1861 CCCAATTTCAAACCTCCGGTA-TATTATGACACA-AAGGATATCATACTAAAAGT-GGGG 1917
|| ||||| ||| |||||| | || |||||| | ||| ||||| | |||| ||| ||
Sbjct 1633 CCTAATTTTAAATCTCCGG-AGCATGATGACA-AGAAGAATATCCTGCTAATAGTAGGAA 1690
Query 1918 GTACCT-GTCGCTGCAGCAACACTTC-TTTT-G--TTTATCATAGTG--GGTGT-ATTCT 1969
|| | || || |||| || | || |||| | | |||| |||| | | || |
Sbjct 1691 TTA--TAGTTGCCGCAGTAA-TCCTCATTTTGGCCATCATCACAGTGATCATTTGCTTGT 1747
Query 1970 GGaaaaaaaGGCGTGACAAAAATG-ATATTGACAAAGAGCTAAGGGGTCTAGATCTTCAA 2028
||| || |||| || ||||||||| | || ||||||||||| |||||| ||||||||||
Sbjct 1748 GGAGAAGAAGGTGTTACAAAAATGCA-ATGGACAAAGAGCTTAGGGGTTTAGATCTTCAG 1806
Query 2029 ACTGGAACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAA-TTTCGATGTAACAAG 2087
|||| |||||||||||| || || ||||||||||| ||| |||| ||| |||| | |||
Sbjct 1807 ACTGAAACTTTTACTCTTCGACATATAAAAGCAGCTACTAATAACTTT-GATGCAGCAA- 1864
Query 2088 A-AAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTATCTGAGGGGA-AA 2145
| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||| |
Sbjct 1865 ACAAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGTGTTATCAGAGGGGAGGA 1924
Query 2146 TTAATTGCAGTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGCGAGTTTGTAAAT 2205
| ||||| |||||| || ||||| |||| || | || |||| || |||||||| |||
Sbjct 1925 -TGATTGCGGTTAAAAAATTGTCTTCAAAGTCCAATCAAGGAAGCCGGGAGTTTGTGAAT 1983
Query 2206 GAGATAGGAATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCTATATGGATGTTGT 2265
||| |||| ||||||||| |||| |||||||| |||||||||||||||||||||| ||||
Sbjct 1984 GAGTTAGGCATGATCTCATCTCTACAACATCCAAATCTTGTGAAGCTATATGGATCTTGT 2043
Query 2266 GTTGAAGGA-AACCAATTGATATTGGTGTATGAGTACTTGGAGAACAACTGTCTATCTCG 2324
| || || | || ||| |||||||||| || ||||| ||||||||||||||||| |||||
Sbjct 2044 G-TGGAGAAGAAGCAACTGATATTGGTCTACGAGTATTTGGAGAACAACTGTCTTTCTCG 2102
Query 2325 AGCGT-TATTTGGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGGTCAACAAGGAAGA 2383
|| | || || || || || ||||||||| |||| ||| |||| |||||||
Sbjct 2103 TGC-TCTA-TT--------TG-GA--TCCAGACTGAAATTAGAATGGCCAACGAGGAAGA 2149
Query 2384 AGAtttttttGGGGATAGCCAAGGGACTGACATTTCTCCATGAAGAATCTAG-GATAAAG 2442
|||||| |||||| ||||| || ||||| | ||||||||| ||||||||| | ||| |||
Sbjct 2150 AGATTTGTTTGGGCATAGCTAAAGGACTAAAATTTCTCCACGAAGAATCT-GCGATCAAG 2208
Query 2443 ATTGTACACAGAGATATAAAGGCAAGCAATGTGTTACTCGATAAGGATCTCAACGCTAAA 2502
||||| ||||| ||||||||||| ||||| ||||| || ||| | ||||||||||| |||
Sbjct 2209 ATTGTGCACAGGGATATAAAGGCGAGCAACGTGTTGCTAGATGACGATCTCAACGCCAAA 2268
Query 2503 ATTTCTGACTTTGGTTTGGCAAAGCTGAATGATGATG-GAAACACACACATCAGCACTCG 2561
|| |||||||||||||||||||||||||||||||||| ||| ||||||||||| |||||
Sbjct 2269 ATCTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGAGAA-CACACACATCAATACTCG 2327
Query 2562 TATTGCAGGAACTAT-AGGTTATATGGCTCCTGAATATGCAATGCGTGGTTACTTGACTG 2620
||| || ||||| | ||| ||||||||||| ||||| || ||||||||||| |||||||
Sbjct 2328 TATCGCCGGAAC-ACCAGGATATATGGCTCCGGAATACGCCATGCGTGGTTATTTGACTG 2386
Query 2621 AAAAAGCGGATGTTTATAGCTTCGGCGTCGTTGCACTCGAAATCGTTAGTGGAAAGAGTA 2680
||||||| |||||||||||||| ||||||||||| || ||||| || |||||||||||||
Sbjct 2387 AAAAAGCTGATGTTTATAGCTTTGGCGTCGTTGCCCTTGAAATTGTCAGTGGAAAGAGTA 2446
Query 2681 ACACAAACTTTAGGCCAACCGAGGACTTTGTTTACCTTCTTGATTGGGCTTACGTTTTGC 2740
|| ||||| | | |||| |||| |||| | | |||||||||| ||| ||||||||||
Sbjct 2447 ACTCAAACGTCAAACCAAGCGAGAACTTGGAGTGCCTTCTTGATCAGGCCTACGTTTTGC 2506
Query 2741 AAGAGAGAGGAA-GCTTACTAGAGCT-GGTTGATCCAACGTTAGCCTCAGATTACTCAGA 2798
|||| | ||| | |||||||||| || |||||||||| | ||| |||| |||||| |
Sbjct 2507 AAGACA-AGGGATGCTTACTAGA-CTTGGTTGATCCAGTGCTAGATTCAGCCTACTCAAA 2564
Query 2799 AGAGGAAGCCATGTTGATGCT-GAACGTGGCATTGAT-GTGCACTAACGCATCACCGAC- 2855
||||||||| ||| |||| || |||||||||| | || |||||||||| | || ||| |
Sbjct 2565 AGAGGAAGCAATGGTGAT-CTTGAACGTGGCACT-ATTGTGCACTAACACGTCCCCGGCG 2622
Query 2856 TCTAAGGCCTACAATGTCGCAGGTGGTGAGTCTCATAGAGGGGAAGACAGCGATGCAAGA 2915
| ||||||| | |||||||||||| ||||||||| | |||| ||| | || ||| || |
Sbjct 2623 T-TAAGGCCAAAAATGTCGCAGGTCGTGAGTCTCCTCGAGGAAAAGGCCGCAATGAAAAA 2681
Query 2916 GTTGCTGTCGGATCCGAGCTTCTCAACGGTTAACCCGAAGCT 2957
|| ||||||| || | ||||||| | || |||||||||||
Sbjct 2682 CCTGTTGTCGGACCCAAACTTCTCAGCAGTGAACCCGAAGCT 2723
> Ahg898471 jgi|Araly1|898471|Al_scaffold_0005_2437
Length=2820
Score = 1103 bits (597), Expect = 0.0
Identities = 1300/1631 (80%), Gaps = 81/1631 (5%)
Strand=Plus/Plus
Query 1380 TGGCGCTAACAAGCGCTGGGCGTTGAGCAGCACCGGGA-ACTTCATGGACAATGA--TGA 1436
|||| || |||||| |||||| || ||||||||| ||| ||||||| | ||||| | |
Sbjct 1113 TGGCTCTGACAAGCACTGGGCATTTAGCAGCACC-GGACACTTCAT-G--AATGATCTTA 1168
Query 1437 C-GATGCT-GATGAGTATACTGTG-CAGAACACATCCAGGTTATCAGTTAATGCTTCCTC 1493
| || | | ||||| || || ||| | ||||| || | ||| || | ||||||| ||
Sbjct 1169 CAGAAG-TGGATGACTACACCGTGTC-TAACACCTCTACACTATTAGCTGATGCTTCGTC 1226
Query 1494 TCCCAGCTTTGGACTT-TATAGGACAGCTC-GAGTCTCTCCTTTATCGTTGACTTACTAC 1551
||| || ||| | || || | ||| |||| || | |||||| | | |||||||||||||
Sbjct 1227 TCCAAG-TTTCGTGTTGTACAAGACGGCTCGGA-TTTCTCCTCTCTTGTTGACTTACTAC 1284
Query 1552 GGAATCTGTCTTGGAAATGGGAACTACACTGTGAATCTCCACTTTGCTGAGATCATCTTT 1611
||| ||||||| || |||||| | |||||||||| ||||||||| || ||||| || |||
Sbjct 1285 GGACTCTGTCTCGGCAATGGGGAGTACACTGTGAGTCTCCACTTCGCAGAGATAATATTT 1344
Query 1612 ACCGA-TGACAATACATTATACAGTCTCGGCAAACGTTTGTTTGATATTTATGTTCAGGA 1670
||| | ||||||||||| |||||||| || ||| | |||| |||||||||||||||||
Sbjct 1345 ACC-AGCGACAATACATTCTACAGTCTTGGGAAAAGAGTGTTCGATATTTATGTTCAGGA 1403
Query 1671 TCAGTTGGTGATTAAAAACTTTAACATTCAAGAAGCTGCTCGAGGATCAGGTAAGCCAAT 1730
| ||||| ||||||||||||| |||||| ||||||||||| | ||||| || ||||||||
Sbjct 1404 TAAGTTGATGATTAAAAACTTCAACATTAAAGAAGCTGCTGGTGGATCGGGGAAGCCAAT 1463
Query 1731 CATTAAA-TCGTTTCTGGTAAATGTAACGGACCATACTCTGAAGATTGGTTTGCGATGGG 1789
|| |||| | ||| ||||| ||||||| | || | ||||||||| | ||| | ||||
Sbjct 1464 CA-TAAAGACATTTTTGGTAGATGTAACAAATCACAATCTGAAGATCAGCTTGAGGTGGG 1522
Query 1790 CTGGCAAAGGGACAAC-AGGCATTCCGATTAGAGGGGTATATGGTCCTATGATTTCAGCT 1848
|||||||||||||||| | || |||| |||||||| || || || |||||||| |||||
Sbjct 1523 CTGGCAAAGGGACAACTACGC-TTCCAATTAGAGGAGTTTACGGCCCTATGATCTCAGCC 1581
Query 1849 ATATCTGTGGAACCCAATTTCAAACCTCCGGTA-TATTATGACACA-AAGGATATCATAC 1906
||||| || ||||| ||||| ||| |||||| | || |||||| | ||| ||||| |||
Sbjct 1582 ATATCAGTTGAACCTAATTTTAAATCTCCGG-AGCATGATGACA-AGAAGAATATCCTAC 1639
Query 1907 TAAAAGT-GGGGGTACCT-GTCGCTGCAGCAACACTTC-TT-TTGT--TTATCATAGTG- 1959
||| ||| || || | || || |||| || | || || | || | |||| ||||
Sbjct 1640 TAATAGTAGGAATTA--TAGTTGCCGCAGTAA-TCCTCATTGTGGTCATCATCACAGTGA 1696
Query 1960 -GGTGT-ATTCTGGaaaaaaaGGCGTGACAAAAATG-ATATTGACAAAGAGCTAAGGGGT 2016
| | || ||||||| |||| || ||||||||| | || ||||||||||| ||||||
Sbjct 1697 TCATTTGCTTGTGGAAAAGAAGGTGTTACAAAAATGCA-ATGGACAAAGAGCTGAGGGGT 1755
Query 2017 CTAGATCTTCAAACTGGAACTTTTACTCTACGGCAGATAAAAGCAGCCACTGATAA-TTT 2075
|||||||||| |||||||| || ||||| || || |||||||| |||||| |||| |||
Sbjct 1756 TTAGATCTTCAGACTGGAACCTTCACTCTTCGACATATAAAAGCGGCCACTAATAACTTT 1815
Query 2076 CGATGTAACAAGA-AAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGAATTAT 2134
|||| | ||| | |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1816 -GATGCAGCAA-ACAAGATTGGTGAAGGTGGATTTGGCTCTGTTTACAAGGGTGTGTTAT 1873
Query 2135 CTGAGGGGA-AATTAATTGCAGTTAAACAACTGTCTGCAAAATCGAGGCAGGGAAATCGC 2193
| ||||||| | ||||| |||||| || ||||| |||| || | || |||| ||
Sbjct 1874 CCGAGGGGAGGA-CGATTGCGGTTAAAAAATTGTCTTCAAAGTCCAATCAAGGAAGCCGA 1932
Query 2194 GAGTTTGTAAATGAGA-TAGGAATGATCTCAGCTCTTCAACATCCGAATCTTGTGAAGCT 2252
|||||||| ||||| | |||| ||||||||| |||| |||||||| ||||||||||| ||
Sbjct 1933 GAGTTTGTGAATGA-ATTAGGGATGATCTCATCTCTACAACATCCAAATCTTGTGAAACT 1991
Query 2253 ATATGGATGTTGTGTTGAAGGA-AACCAATTGATATTGGTGTATGAGTACTTGGAGAACA 2311
|||||||||||||| || || | || ||| |||||||||| || ||||| ||||||||||
Sbjct 1992 ATATGGATGTTGTG-TGGAGAAGAAGCAACTGATATTGGTCTACGAGTATTTGGAGAACA 2050
Query 2312 ACTGTCTATCTCGAGCGT-TATTTGGAAAGGATGAGAGTTCTAGACTGAAACTAGACTGG 2370
||||||| ||||| || | || || || || || ||||||||| |||| |||
Sbjct 2051 ACTGTCTTTCTCGTGC-TCTA-TT--------TG-GA--TCGAGACTGAAATTAGAATGG 2097
Query 2371 TCAACAAGGAAGAAGAtttttttGGGGATAGCCAAGGGACTGACATTTCTCCATGAAGAA 2430
|||||||||||||||||| |||||| ||||| || ||||| ||||||||||||||||||
Sbjct 2098 CCAACAAGGAAGAAGATTTGTTTGGGCATAGCTAAAGGACTAACATTTCTCCATGAAGAA 2157
Query 2431 TCTAG-GATAAAGATTGTACACAGAGATAT-AAAGGCAAGCAATGTGTTACTCGATAAGG 2488
||| | ||| |||||||| ||||| ||||| |||| | ||||| ||||| || ||| |||
Sbjct 2158 TCT-GTGATCAAGATTGTGCACAGGGATATTAAAG-CGAGCAACGTGTTGCTAGATGAGG 2215
Query 2489 ATCTCAACGCTAAAATTTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGGAAACACAC 2548
||||||| || ||||| |||||||||||||||||||||||||||||||||| |||||| |
Sbjct 2216 ATCTCAATGCCAAAATCTCTGACTTTGGTTTGGCAAAGCTGAATGATGATGAAAACACGC 2275
Query 2549 ACATCAGCACTCGTATTGCAGGAACTAT-AGGTTATATGGCTCCTGAATATGCAATGCGT 2607
|||||| ||||||||| || ||||| | ||| ||||||||||| ||||| || |||||
Sbjct 2276 ACATCAACACTCGTATCGCCGGAAC-ACCAGGATATATGGCTCCGGAATACGCCATGCGG 2334
Query 2608 GGTTACTTGACTGAAAAAGCGGATGTTTATAGCTTCGGCGTCGTTGCACTCGAAATCGTT 2667
||| | ||||| |||||||| |||||||||||||| ||||||||||| || ||||||||
Sbjct 2335 GGTCATTTGACCGAAAAAGCAGATGTTTATAGCTTTGGCGTCGTTGCCCTTGAAATCGTC 2394
Query 2668 AGTGGAAAGAGTAACACAAACTTTAGGC--C-AACCGAGGACTTTGTTTACCTTCTTGAT 2724
||||||||||||||| ||||| | | | | || |||| |||| | | ||||||||||
Sbjct 2395 AGTGGAAAGAGTAACTCAAACGTCAAACAACCAAGCGAGAACTTGGAGTGCCTTCTTGAT 2454
Query 2725 TGGGCTTACGTTTTGCAAGAGA-GAGGAAGCTTACTAGAGCT-GGTTGATCCAACGTTAG 2782
||| |||||||||||||| | | ||| |||||||||| || |||||| ||| | |||
Sbjct 2455 CAGGCCTACGTTTTGCAAGACATG-GGATGCTTACTAGA-CTTGGTTGACCCAGTGCTAG 2512
Query 2783 CCTCAGATTACTCAGAAGAGGAAGCCATGTTGATGCT-GAACGTGGCATTGATGTGCACT 2841
|||| ||||||| |||||||||| ||| |||| || ||||||||| | |||||||||
Sbjct 2513 GTTCAGCTTACTCAAAAGAGGAAGCAATGGTGAT-CTTGAACGTGGCGCTAATGTGCACT 2571
Query 2842 AACGCATCACCGAC-TCTAAGGCCTACAATGTCGCAGGTGGTGAGTCTCATAGAGGGGAA 2900
||| | || ||| | | ||||||| | |||||||||||| ||||||||| | |||| ||
Sbjct 2572 AACACGTCCCCGGCGT-TAAGGCCAAAAATGTCGCAGGTCGTGAGTCTCCTCGAGGAAAA 2630
Query 2901 GACAGCGATGCAAGAGTTGCTGTCGGATCCGAGCTTCTCAACGGTTAACCCGAAGCTTAA 2960
||| || ||| || | || ||||||| || | ||||||| | || ||||||||||| ||
Sbjct 2631 GACCGCAATGAAAAACCTGTTGTCGGACCCAAACTTCTCAGCAGTGAACCCGAAGCTGAA 2690
Query 2961 AGCCTTGAGGA 2971
|| || ||||
Sbjct 2691 GGCTTTAAGGA 2701
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 121936463892
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5