BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G09030.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value Ahg919651 jgi|Araly1|919651|scaffold_100932.1 721 0.0 > Ahg919651 jgi|Araly1|919651|scaffold_100932.1 Length=460 Score = 721 bits (390), Expect = 0.0 Identities = 410/420 (98%), Gaps = 0/420 (0%) Strand=Plus/Plus Query 1 ATGACAGACGAAGATAGATTGTTGCCAATAGCCAATGTAGGGAGACTTATGAAGCAAATC 60 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 21 ATGACAGACGAAGATAGATTGTTACCAATAGCCAATGTAGGGAGACTTATGAAGCAAATC 80 Query 61 CTACCATCAAATGCAAAGATCTCAAAAGAAGCAAAACAAACAGTTCAAGAATGTGCAACA 120 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 81 CTACCATCAAATGCAAAGATCTCAAAAGAAGCAAAACAAACAGTTCAAGAGTGTGCAACA 140 Query 121 GAGTTCATAAGCTTTGTTACATGCGAAGCATCAGAGAAGTGCCACAGGGAGAATCGGAAG 180 ||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| Sbjct 141 GAGTTCATAAGCTTTGTTACATGCGAAGCCTCGGACAAGTGCCACAGGGAGAATCGAAAG 200 Query 181 ACGGTGAATGGAGACGACATCTGGTGGGCTCTCAGCACTCTCGGCCTCGATAACTATGCT 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 201 ACGGTGAATGGAGACGACATCTGGTGGGCTCTCAGCACTCTCGGCCTCGATAACTATGCT 260 Query 241 GACGCCGTGGGTAGGCATCTTCACAAGTACCGTGAAGCCGAGAGAGAAAGAACTGAGCAC 300 |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 261 GACGCCGTGGGTAGGCATCTTCACAAGTACCGTGAAGCCGAGCGAGAAAGAACTGAGCAC 320 Query 301 AACAAAGGTAGCAATGATAGTGGGAATGAGAAAGAAACCAACACTAGAAGTGATGTACAG 360 |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 321 AACAAAGGTAGCAATGATAGTGGGAATGAGAAAGAACCCAACACTAGAAGTGATGTACAC 380 Query 361 AACCAATCGACAAAATTTATTAGAGTTGTTGAGAAGGGAAGCAGCTCCTCGGCCCGTTGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 381 AACCAATCGACAAAATTTATTAGAGTTGTTGAGAAGGGAAGCAGCTCCTCAGCCCGTTGA 440 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 15109613244 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5