BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G09410.1
Length=2118
Score E
Sequences producing significant alignments: (Bits) Value
Ahg337864 jgi|Araly1|337864|fgenesh1_pg.C_scaffold_1004429 1413 0.0
Ahg471032 jgi|Araly1|471032|fgenesh2_kg.1__986__AT1G09410.1 896 0.0
> Ahg337864 jgi|Araly1|337864|fgenesh1_pg.C_scaffold_1004429
Length=2853
Score = 1413 bits (765), Expect = 0.0
Identities = 1669/2093 (80%), Gaps = 111/2093 (5%)
Strand=Plus/Plus
Query 70 ATCACTCATCTCTCTCGTATCGG-CAAGATTC-ATGAAGCTCGGAAGCTTTTCGATTCAT 127
||| ||| |||||| || ||||| ||| | || |||||||||| ||| ||||||||||
Sbjct 70 ATCTCTCGTCTCTCACGAATCGGTCAA-A-TCAATGAAGCTCGAAAGTTTTTCGATTC-- 125
Query 128 GTGA--CTCGAAATCAATCTCTTCCTGGAACTCTATGGT-TGCTGGGTACTTTGCGAATC 184
|| | || ||| ||||| |||||||||||| || || | |||||||||| || || |
Sbjct 126 GTTACGCTATAAAGCAATCGGTTCCTGGAACTCAATTGTCT-CTGGGTACTTCGC-AAAC 183
Query 185 --TAATGCCCCGAGATGCACG-GAAACTGTTCGATGAAATGCCTGACAGAAACATCA-TC 240
| | || |||| ||||| ||| ||||||||||||||||||| ||||| || | |
Sbjct 184 GGT-TTACCGAGAGAAGCACGCCAAA-TGTTCGATGAAATGCCTGAGAGAAATAT-AGTT 240
Query 241 TCTTGGAATGGTTTGGTGTCCGGGTATATGAAGAACGGGGA-GATTGACGAAGCTAGGAA 299
|||||||| || ||||| || |||||||| ||||| ||| |||||| |||||||||||
Sbjct 241 TCTTGGAACGGGTTGGTTTCAGGGTATATTAAGAA-TAGGATGATTGAAGAAGCTAGGAA 299
Query 300 AGTGTTTGATTTAATGCCTGAGAGGAATGTTGTCTCATGGACGGCGTTGGTGAAAGGGTA 359
|||||||| |||||||||||||||| ||||| || ||||| ||| |||| ||||| ||
Sbjct 300 TGTGTTTGAGATAATGCCTGAGAGGAACGTTGTGTCGTGGACCGCGATGGTTAAAGGTTA 359
Query 360 TGTGC-ACAATGGTAAGGTTGATGTGGCAGAGTCGTTGTTTTGGAAAATGCCTGAGAAGA 418
||||| | || |||| ||||| || || |||| ||||||||||| ||||||||||| ||
Sbjct 360 TGTGCAAGAA-GGTATGGTTGTTGAAGCGGAGTTGTTGTTTTGGAGAATGCCTGAGAGGA 418
Query 419 ATAAGGTTTCTTGGACTGTGATGCTTATTG-GGTTT--TTGCAAGATGGGCGAATCGATG 475
|| |||||||||||||||||||| || | | ||||| ||| | | ||| || |||||||
Sbjct 419 ATGAGGTTTCTTGGACTGTGATG-TT-TGGTGGTTTGATTG-ATGGTGGACGTATCGATG 475
Query 476 ATGCGTGTAAGCTGTATGAAATGATACCGGATAAAGATAATATTGCAAGGACTAGTATGA 535
||||| | ||| ||||||| ||||| |||| |||||| | | || || |||| |||||
Sbjct 476 ATGCGAGGAAGTTGTATGATATGATGCCGGGGAAAGATGTTGTAGCGAGTACTAATATGA 535
Query 536 TTCATGGATTGTGCAAAGAAGGAAGAGTGGATGAGGCAAGAGAGATTTTTGATGAGATGT 595
|| ||| ||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct 536 TTGGTGGGTTGTGTAGAGAAGGAAGAGTGGATGAGGCAAGAGAGATTTTTGATGAGATGA 595
Query 596 CAGAGAG-AAGTGTGATTACTTGGACTACAATGGTCACAGGATATGGGCAGAACAATCGT 654
||||| || |||||||||||||||||| ||| | || || || |||||||| || ||
Sbjct 596 GGGAGAGGAA-TGTGATTACTTGGACTACGATGATTACTGGGTACGGGCAGAATAAGCGA 654
Query 655 GTGGATGATGCTAGGAAGATT-TTTGATGTGATGCCAGAGAAAACTGAAGTTTCATGGAC 713
||||||| |||||||||| || ||||| |||||||| ||||||||||||||||| |||||
Sbjct 655 GTGGATGTTGCTAGGAAG-TTGTTTGAAGTGATGCCGGAGAAAACTGAAGTTTCGTGGAC 713
Query 714 TTCCATGCTTATGGGCTATG-TACAGAATGGGCGAATTGAGGATGCTGAAGAACTT-TTT 771
||| |||||| |||| ||| | || |||| |||||||||||||||| || || |||
Sbjct 714 TTCTATGCTTTTGGGGTATACTTT-GAGTGGGAGAATTGAGGATGCTGAGGAG-TTCTTT 771
Query 772 GAAGTTATGCC-AGTGAAGCCAGTTATTGCGTGTAATGCTATGATT-TCCGGGCTTGGAC 829
|| || ||||| | ||||||| |||||||||||||||||||||||| | ||| ||||
Sbjct 772 GAGGTGATGCCGA-TGAAGCCGGTTATTGCGTGTAATGCTATGATTGTT-GGG-TTGGGT 828
Query 830 -AGAAAGGAGAGATAGCAAAAGCAAGAAGGGTTTTTGATTCAA-TGAAGGAGAGAAATGA 887
|| ||||||||||| ||||| || |||||||||||| ||| || |||| ||| || |
Sbjct 829 GAGGTAGGAGAGATAGTGAAAGCGAGGAGGGTTTTTGAT-CAAATGGAGGATAGAGATAA 887
Query 888 TGC-ATCTTGGCAAACGG--TGATCAAAA-TTCACGAAAGAAACGGTTTTGAATTGGAGG 943
||| | |||||| | || |||| ||| || | |||||||| ||||||||||||||||
Sbjct 888 TGCGA-CTTGGCGA--GGAATGATTAAAGCTT-ATGAAAGAAAAGGTTTTGAATTGGAGG 943
Query 944 CTCTTGATTTATTTATTCTGATGCAGAAACAGGGAGTTAGACCCACTTTTCCAACATTGA 1003
|||||||||| ||| || ||||||| ||| ||||||||||| | |||||| | ||||
Sbjct 944 CTCTTGATTTGTTTGCTCAAATGCAGAGACAAGGAGTTAGACCGAGTTTTCCGTCTTTGA 1003
Query 1004 TAAGCATTCTTTCGGTCTGCGCCAGCTT-AGCAAGCCTCCACCATGGTAAACAGGTCCAT 1062
| |||||||||||||| || |||| ||| |||||| || || |||||| |||||||||
Sbjct 1004 TCAGCATTCTTTCGGTTTGTGCCA-CTTTAGCAAGTCTACAATATGGTAGGCAGGTCCAT 1062
Query 1063 GCTCAGTTGGTTAGATGTCAATTTGATGTTGATGTGTATGTTGCGTCTGTTTTAATGACA 1122
||||| |||||||||||||| ||||||| ||||||||||||||| |||||||| |||||
Sbjct 1063 GCTCACTTGGTTAGATGTCAGTTTGATGGTGATGTGTATGTTGCCTCTGTTTTGATGACC 1122
Query 1123 ATGTACATTAAATGCGGCGAGCTTGTGAA-GTCTAAA-CTAATATTTGACAGGTTTCCTT 1180
||||| | |||||||| |||||||| || | | ||| ||| |||||||||||||||| |
Sbjct 1123 ATGTATGTCAAATGCGGTGAGCTTGTAAAAG-C-AAAGCTAGTATTTGACAGGTTTCCCT 1180
Query 1181 CAAAGGACATTATCATGTGGAATTCAATCATATCTGGTTATGCCTCACACGGTCTT-GGA 1239
||||||||||||||||||||||||||||||| ||||||||||| || |||||| || |||
Sbjct 1181 CAAAGGACATTATCATGTGGAATTCAATCATCTCTGGTTATGCGTCGCACGGT-TTAGGA 1239
Query 1240 GAGGAAGCA-TTAAAGGTTTTCTGTGAGATGCCTTTGTCTGGTAGTACTAAGCCTAACGA 1298
|||||||| |||| ||||||| ||||||||| |||||||||| | | ||| ||| |
Sbjct 1240 GAGGAAGCTCTTAA-GGTTTTCCATGAGATGCCATTGTCTGGTACCA-T--GCCAAACAA 1295
Query 1299 AGTCACCTTCGTTGCAACTCTCTCAGCATGTAGTTACGCTGGGATGGTTGAGGAAGGGCT 1358
||| ||||| |||||| ||| |||||||||| || | ||| | | || ||||||||
Sbjct 1296 AGTGACCTTAATTGCAATTCTGACAGCATGTAGCTATGGTGGAAAACTCGAAGAAGGGCT 1355
Query 1359 TAAGATCTATGAATCTATGGAATC-A-GTTTTTGGGGTTA-AGCCAATCACC-GCGCATT 1414
| |||| | |||||| |||||||| | || || | | | | | |||| | | |||||
Sbjct 1356 TGAGATATTTGAATCAATGGAATCCAAGTATT-GCG-TGACA-CCAA-CGGTTGAGCATT 1411
Query 1415 ATGCTTGCATGGTAGATATGCTTGGGCGTGCAGGACG-GTTTAATGAGGCAATGGAAATG 1473
|| |||||| ||| ||||||||||| ||||||||| || | | ||||||||||| ||
Sbjct 1412 ATTCTTGCACGGTGGATATGCTTGGACGTGCAGGAAAAGTAGA-TAAGGCAATGGAATTG 1470
Query 1474 ATTGATAGTATGACTGTCGAA-CCAGATGCTGCAGTTTGGGGTTCTCTATTAGGAGCGTG 1532
|| ||||||||||| | || ||||||||| ||||||||||| |||| || ||||||||
Sbjct 1471 ATCAATAGTATGACTATA-AAGCCAGATGCTACAGTTTGGGGTGCTCTGTTGGGAGCGTG 1529
Query 1533 CAGAACTCACTCGCAG-CTGGATGTGGCAGAATTTTG-TGCGAAGAAACTCATAGAGATT 1590
| ||||||||| || || ||| | || ||| || | ||| ||||||||| | |||||
Sbjct 1530 TAAAACTCACTCA-AGACTAGATTTAGCCGAAGTT-GCTGCAAAGAAACTCTTCGAGATA 1587
Query 1591 GAACCGGAGAATTCTGGGACTTACATCTTGCTCTCCAA-CATGTATGCATCTCAAGGTAG 1649
||||| || || |||| | ||||| ||||| || || ||| ||||||||| | |
Sbjct 1588 GAACCAGAAAACGCTGGTCCATACATTTTGCTATC-AAGCATAAATGCATCTCGATCCAA 1646
Query 1650 GTGGGCTGACGTTGCAGAACTGAG-AAAA-CTTATGAAGACTAGGTTGGTAAGAAAAT-C 1706
|||| || ||||||||| |||| |||| | |||| ||| | | ||||| |||| |
Sbjct 1647 ATGGGGAGATGTTGCAGAAGTGAGGAAAAAC--ATGAGGACAAAGAACGTAAGTAAATTC 1704
Query 1707 ACCAGGTTGTAGCTGGACTGAAGTCGAGAACAAGGTGCATGCAT-T-CACTCGTGGGGGT 1764
|| || |||||||||| ||| || | ||| || ||||| ||| | |||||| || |||
Sbjct 1705 -CCTGGATGTAGCTGGATTGAGGTAGGGAAAAAAGTGCA--CATGTTCACTCGCGGAGGT 1761
Query 1765 ATTA-ATAGCCATCCCGAGCA-G-GAATCTATTTTGAA-GATACTGGATGAATTG-GATG 1819
|| | | | |||||||||||| | || | || || || ||| |||| ||| ||||
Sbjct 1762 ATCAGAAA-CCATCCCGAGCAAGCGA-TG-ATATT-AATGATGTTGGA-GAAAACAGATG 1816
Query 1820 GGTTATTGAGAGAAGCCGGGTATAATCCTGATTGCAG-CTATG-CATTGCACGATGTAGA 1877
| ||||| |||||||| || |||| |||||||||||| | ||| | || |||||||||||
Sbjct 1817 GATTATTAAGAGAAGCTGGTTATAGTCCTGATTGCAGTC-ATGTC-TTACACGATGTAGA 1874
Query 1878 CGAGGAAGAGAAAGTCAATAGCCTGAAATA-TCATAGCGAGAGACTAGCGGTAGCTTATG 1936
||||||||||||||| ||||| | || | ||| ||||||||||| |||||||||||||
Sbjct 1875 CGAGGAAGAGAAAGTTGATAGCTT-AAGTCGTCACAGCGAGAGACTCGCGGTAGCTTATG 1933
Query 1937 CTCTTTTAAAGCTATCTGAAGGAATACCCATCCGAGTCATGAAGAACCTTAGAGTTTGTA 1996
|| ||||||||| | |||||| |||| || ||||||||||||||||||||||| |||
Sbjct 1934 GACTCTTAAAGCTACCCGAAGGAGTACCTATTCGAGTCATGAAGAACCTTAGAGTCTGTG 1993
Query 1997 GTGATTGCCACACAGCAATAAAAATAATCTCTAAGGTGAAAGAGAGGGAGATCATTCTAA 2056
| |||||||| | || || ||| | || ||||| || | ||| || |||||||||||||
Sbjct 1994 GAGATTGCCATGCCGCCATTAAACTCATTTCTAAAGTTACAGAAAGAGAGATCATTCTAA 2053
Query 2057 GAGATGCAAACAGATTCCATCACTTCAGA-AACGGAGAGTGTTCCTGTAAAGA 2108
|||||||||||||||||||||| |||| | || ||||||||||| |||| |||
Sbjct 2054 GAGATGCAAACAGATTCCATCATTTCA-ACAATGGAGAGTGTTCTTGTAGAGA 2105
> Ahg471032 jgi|Araly1|471032|fgenesh2_kg.1__986__AT1G09410.1
Length=1788
Score = 896 bits (485), Expect = 0.0
Identities = 537/562 (96%), Gaps = 4/562 (1%)
Strand=Plus/Plus
Query 832 AAAGGAGAGATAGCAAAAGCAAGAAGGGTTTTTGATTCAATGAAGGAGAGAAATGATGCA 891
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct 683 AAAGGAGAGATAGCAAAAGCAAGGAGGG-TTTTGATTCAATGAAGGAGAGAAATGATGCA 741
Query 892 TCTTGGCAAACGGTGATCAAAATTCACGAAAGAAACGGTTTTGAATTGGAGGCTCTTGAT 951
||||||||| ||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 742 ACTTGGCAAATGGTAATCAAATTTCACGAAAGAAACGGTTTTGAATTGGAGGCTCTTGAT 801
Query 952 TTATTTATTCTGATGCAGAAACAGGGAGTTAGACCCACTTTTCCAACATTGATAAGCATT 1011
|||||| |||||||||||||||||||||||||||| ||||||||||||||||| ||| ||
Sbjct 802 TTATTTGTTCTGATGCAGAAACAGGGAGTTAGACCGACTTTTCCAACATTGATCAGCGTT 861
Query 1012 CTTTCGGTCTGCGCCAGCTTAGCAAGCCTCCACCATGGTAAACAGGTCCATGCTCAGTTG 1071
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 862 CTTTCGGTCTGCGCCAGCTTAGCAAGCCTCCACCATGGTAAACAGGTCCATGCTCAGTTG 921
Query 1072 GTTAGATGTCAATTTGATGTTGATGTGTATGTTGCGTCTGTTTTAATGACAATGTACATT 1131
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct 922 GTTAGATGTCAATTTGATGTTGATTTGTATGTTGCGTCTGTTTTGATGACAATGTACATT 981
Query 1132 AAATGCGGCGAGCTTGTGAAGTCTAAACTAATATTTGACAGGTTTCCTTCAAAGGACATT 1191
||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 982 AAATGCGGCGAGCTTTTGAAGTCGAAACTAATATTTGACAGGTTTCCTTCAAAGGACATT 1041
Query 1192 ATCATGTGGAATTCAATCATATCTGGTTATGCCTCACACGGTCTTGGAGAGGAAGCAT-T 1250
||||||||||| ||||||||||||||||||||||||||| |||| ||||||||||| | |
Sbjct 1042 ATCATGTGGAACTCAATCATATCTGGTTATGCCTCACACAGTCTAGGAGAGGAAGC-TCT 1100
Query 1251 AAAGGTTTTCTGTGAGATGCCTTTGTCTGGTAGTACTAAGCCTAACGAAGTCACCTTCGT 1310
|||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1101 AAAGATTTTCTATGAGATGCCTTTGTCTGGTAGTACTGAGCCTAACGAAGTCACCTTCGT 1160
Query 1311 TGCAACTCTCTCAGCATGTAGTTACGCTGGGATGGTTGAGGAAGGGCTTAAGATCTATGA 1370
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct 1161 TGCAACTCTCTCAGCATGTAGCTACGCTGGGATGGTTGAGGAAGGGCTTAAGATCTTTGA 1220
Query 1371 ATCTATGGAATCAGTTTTTGGG 1392
|||||||||||||||||| |||
Sbjct 1221 ATCTATGGAATCAGTTTT-GGG 1241
Score = 438 bits (237), Expect = 7e-122
Identities = 253/261 (97%), Gaps = 0/261 (0%)
Strand=Plus/Plus
Query 515 ATATTGCAAGGACTAGTATGATTCATGGATTGTGCAAAGAAGGAAGAGTGGATGAGGCAA 574
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 419 ATATTGCAAGGACTAGTATGATTCATGGATTGTGCAAAGAAGGAAGAGTGGATGAGGCAA 478
Query 575 GAGAGATTTTTGATGAGATGTCAGAGAGAAGTGTGATTACTTGGACTACAATGGTCACAG 634
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 479 GGGAGATTTTTGATGAGATGTCAGAGAGAAGTGTGATTACTTGGACTACAATGGTCACAG 538
Query 635 GATATGGGCAGAACAATCGTGTGGATGATGCTAGGAAGATTTTTGATGTGATGCCAGAGA 694
||||||| | ||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct 539 GATATGGTCGGAACAGCCGTGTGGATGATGCTAGGAAGATTTTTGACGTGATGCCAGAGA 598
Query 695 AAACTGAAGTTTCATGGACTTCCATGCTTATGGGCTATGTACAGAATGGGCGAATTGAGG 754
||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct 599 AAACTGAAGTTTCATGGACTTCCATGCTTATGGGCTATGTACAAAATGGACGAATTGAGG 658
Query 755 ATGCTGAAGAACTTTTTGAAG 775
|||||||||||||||||||||
Sbjct 659 ATGCTGAAGAACTTTTTGAAG 679
Score = 294 bits (159), Expect = 2e-78
Identities = 208/229 (91%), Gaps = 14/229 (6%)
Strand=Plus/Plus
Query 1436 TTGGG-CGTGCAGGACGGTTTAATGAGGCAATGGAAATGATTGATAGTATGACTGTCGAA 1494
||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1237 TTGGGACGTGCAGGGCGGTTTAATGAGGCAATGGAAATGATTGATAGTATGACTGTCGAA 1296
Query 1495 CCAGATGCTGCAGTTTGGGGTTCTCTATTAGGAGCGTGCAGAACTCACTCGCAGCTGGAT 1554
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1297 CCAGATGCTGCAGTTTGGGGTTCTCTATTGGGAGCGTGCAGAACTCACTCGCAGCTGGAT 1356
Query 1555 GTGGCAGAATTTTGTGCGAAGAAACTCATAGAGATTGAACCGGAGAATTCTGGGACTTAC 1614
|||||||||||||||| ||||||||||||||||||||| ||||||||||||| || |
Sbjct 1357 TTGGCAGAATTTTGTGCAAAGAAACTCATAGAGATTGAAACGGAGAATTCTGG--CT--C 1412
Query 1615 ATCTTGCTCTCCAACATGTATGCATCTCAAGGTAGGTGGGCTGACGTTG 1663
|| | ||||| |||||||||||||||||||||||||| ||||
Sbjct 1413 -TC---C-----AACATTTATGCATCTCAAGGTAGGTGGGCTGATGTTG 1452
Score = 274 bits (148), Expect = 2e-72
Identities = 182/199 (91%), Gaps = 0/199 (0%)
Strand=Plus/Plus
Query 1692 GTTGGTAAGAAAATCACCAGGTTGTAGCTGGACTGAAGTCGAGAACAAGGTGCATGCATT 1751
||||||||||||||||||||| |||||||||| ||||||| || || ||||| || ||
Sbjct 1449 GTTGGTAAGAAAATCACCAGGCTGTAGCTGGAATGAAGTCAAGTTTAAAGTGCACGCGTT 1508
Query 1752 CACTCGTGGGGGTATTAATAGCCATCCCGAGCAGGAATCTATTTTGAAGATACTGGATGA 1811
||||| |||||||||| ||||||||||||||||||||| ||||||||| || |||||||
Sbjct 1509 CACTCATGGGGGTATTTGTAGCCATCCCGAGCAGGAATCGATTTTGAAGTTATTGGATGA 1568
Query 1812 ATTGGATGGGTTATTGAGAGAAGCCGGGTATAATCCTGATTGCAGCTATGCATTGCACGA 1871
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1569 ATTGGATGGGTTATTGAGAGAAGCCGGGTATAATCCTGATTGCAGTTATGCATTGCACGA 1628
Query 1872 TGTAGACGAGGAAGAGAAA 1890
|||||||||||||| ||||
Sbjct 1629 TGTAGACGAGGAAGGGAAA 1647
Score = 209 bits (113), Expect = 6e-53
Identities = 135/145 (93%), Gaps = 3/145 (2%)
Strand=Plus/Plus
Query 1977 GAAGAACCTTAGAGTTTGTAGTG--A-TTGCCACACAGCAATAAAAATAATCTCTAAGGT 2033
||| ||||||||||||||||||| | ||||| | |||||||||||||||||||||||||
Sbjct 1644 GAAAAACCTTAGAGTTTGTAGTGATATTTGCCGCGCAGCAATAAAAATAATCTCTAAGGT 1703
Query 2034 GAAAGAGAGGGAGATCATTCTAAGAGATGCAAACAGATTCCATCACTTCAGAAACGGAGA 2093
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1704 GAAAGAGATGGAGATCATTCTAAGAGATGCAAACAGATTCCGTCACTTCAGAAACGGAGA 1763
Query 2094 GTGTTCCTGTAAAGATTACTGGTGA 2118
||||||||||| |||||| ||||||
Sbjct 1764 GTGTTCCTGTACAGATTATTGGTGA 1788
Score = 91.6 bits (49), Expect = 2e-17
Identities = 49/49 (100%), Gaps = 0/49 (0%)
Strand=Plus/Plus
Query 375 GGTTGATGTGGCAGAGTCGTTGTTTTGGAAAATGCCTGAGAAGAATAAG 423
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 342 GGTTGATGTGGCAGAGTCGTTGTTTTGGAAAATGCCTGAGAAGAATAAG 390
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 79684792540
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5