BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G09970.2
Length=3251
Score E
Sequences producing significant alignments: (Bits) Value
Ahg919763 jgi|Araly1|919763|scaffold_101044.1 4602 0.0
Ahg919769 jgi|Araly1|919769|scaffold_101050.1 2780 0.0
> Ahg919763 jgi|Araly1|919763|scaffold_101044.1
Length=2979
Score = 4602 bits (2492), Expect = 0.0
Identities = 2815/2974 (95%), Gaps = 10/2974 (0%)
Strand=Plus/Plus
Query 82 TCTCTCCGACATGGCTCCGTCGTTAAGGAATTTCAACTTCTTTCACCGCTTCTCCACCTT 141
|||| ||||||||||||| |||| ||||||||||||||||||||| | ||||||| ||||
Sbjct 12 TCTCACCGACATGGCTCCCTCGTCAAGGAATTTCAACTTCTTTCATCACTTCTCCTCCTT 71
Query 142 CCTCGTCTTCTCTCTATTCTCCGTCGTTTCTTCCGACGATCTCCAAGTCTTACTCAAGCT 201
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 CCTCGTTTTCTCTCTGTTCTCCGTCGTTTCTTCCGACGATCTCCAAGTCTTACTCAAGCT 131
Query 202 CAAATCATCATTCGCCGATTCCAATCTCGCCGTGTTCGATTCCTGGAA-ACTGAACTCCG 260
||||||||||||||| ||||| ||||||||||| |||||||||||||| | ||||||||
Sbjct 132 CAAATCATCATTCGCGGATTCGAATCTCGCCGTCTTCGATTCCTGGAAGA-TGAACTCCC 190
Query 261 GTATCGGTCCTTGTAGCTTCATCGGAGTAACCTGTAATTCTAGAGGCAACGTTACAGAGA 320
||| |||||| |||||||||| |||||||||||| ||||||| |||||||||||||||||
Sbjct 191 GTACCGGTCCATGTAGCTTCACCGGAGTAACCTGCAATTCTAAAGGCAACGTTACAGAGA 250
Query 321 TTGATCTCTCTCGTCGAGGTTTATCTGGGAATTTTCCATTCGATTCGGTTTGTGAGATTC 380
||||||||||||||| ||||||||||||||||||||||||||||| ||| || |||||||
Sbjct 251 TTGATCTCTCTCGTCAAGGTTTATCTGGGAATTTTCCATTCGATTTGGTCTGCGAGATTC 310
Query 381 AGAGTCTCGAGAAACTCTCTCTCGGATTCAATTCACTATCTGGAATAATCCCCAGCGATT 440
||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||
Sbjct 311 AGAGTCTCGAGAAACTCTCTCTCGGATTCAATTCACTGTCTGGAATAATTCCCAGTAATA 370
Query 441 TGAAAAACTGCACGAGTTTGAAGTATTTGGATCTCGGCAACAATTTATTCTCCGGTGCTT 500
||| ||||||||||| ||||||||||||||||||||| |||||||| ||||| ||| |||
Sbjct 371 TGAGAAACTGCACGAATTTGAAGTATTTGGATCTCGGGAACAATTTGTTCTCTGGTACTT 430
Query 501 TCCCTGAGTTCTCATCTTTAAATCAGTTACAGTTTC-TGTATCTCAACAACAGCGCTTTT 559
||||||| ||||| ||| | |||||||||||| | | ||||||||||||||||||| |||
Sbjct 431 TCCCTGAATTCTCCTCTCTGAATCAGTTACAG-TACTTGTATCTCAACAACAGCGCATTT 489
Query 560 TCCGGCGTCTTTCCGTGGAAATCGCTCCGAAACGCAACGAGTCTCGTCGTTTTGAGCCTA 619
||||||| ||||||||||||||| || |||||||| ||||||||||||||||||||||||
Sbjct 490 TCCGGCGCCTTTCCGTGGAAATCACTTCGAAACGCGACGAGTCTCGTCGTTTTGAGCCTA 549
Query 620 GGCGATAATCCGTTTGATGCGACGGCTGATTTCCCGGTGGAGGTTGTTTCTCTGAAGAAA 679
||||||||||||||||||||||| |||||||| |||||||||||||||||||| | ||||
Sbjct 550 GGCGATAATCCGTTTGATGCGACTGCTGATTTTCCGGTGGAGGTTGTTTCTCTCACGAAA 609
Query 680 CTCTCGTGGCTTTACTTGTCGAATTGCAGTATCGCCGGAAAAATTCCACCGGCGATTGGA 739
||||||||||||||||| |||||||||||||| ||||||||||||||| ||||||| ||
Sbjct 610 CTCTCGTGGCTTTACTTATCGAATTGCAGTATAGCCGGAAAAATTCCAGCGGCGATCGGT 669
Query 740 GATTTGACGGAGCTTCGGAATTTGGAGATTTCCGATAGCGGATTAACCGGAGAGATTCCG 799
||||||||||||||||| |||||||||||| |||||||| | ||||||||||||||||||
Sbjct 670 GATTTGACGGAGCTTCGAAATTTGGAGATTGCCGATAGCAGTTTAACCGGAGAGATTCCG 729
Query 800 TCGGAGATTTCGAAACTTACTAATCTCTGGCAGTTAGAGCTTTACAACAACTCCTTGACC 859
|||||||| |||||||| || ||||| |||||||||||||||||||||||||||||||||
Sbjct 730 TCGGAGATCTCGAAACTCACCAATCTTTGGCAGTTAGAGCTTTACAACAACTCCTTGACC 789
Query 860 GGAAAACTTCCTACCGGATTCGGAAACTTGAAGAATCTGACTTACTTGGACGCTTCAACA 919
||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||
Sbjct 790 GGAAAACTTCCTACCGGATTCGGAAACCTGAAGAATCTGACTTACTTGGATGCTTCAACA 849
Query 920 AATCTTCTACAAGGCGATTTATCGGAGCTTAGGTCTCTGACTAATCTCGTTTCACTACAA 979
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 850 AATCTTCTACAAGGCGATTTATCGGAGCTCAGGTCTCTGACTAATCTCGTTTCACTACAA 909
Query 980 ATGTTCGAAAACGAATTCTCCGGTGAGATTCCGCTGGAGTTTGGTGAATTCAAGGATCTC 1039
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 910 ATGTTCGAAAACGAATTCTCCGGTGAGATTCCGATGGAGTTTGGCGAATTCAAGGATCTC 969
Query 1040 GTGAATCTCTCTCTGTATACAAACAAGTTAACCGGTTCTCTGCCTCAAGGACTCGGTTCA 1099
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 970 GTGAATCTCTCTCTGTATACCAACAAGTTAACCGGTTCTCTGCCTCAAGGACTCGGTTCA 1029
Query 1100 CTTGCTGATTTTGATTTCATCGACGCATCAGAGAATCTCTTAACCGGACCGATCCCTCCA 1159
||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1030 CTTGCCGATTTTGATTTCATCGACGCATCAGAGAATCTCTTAACCGGACCTATCCCTCCA 1089
Query 1160 GATATGTGCAAGAACGGGAAGATGAAAGCTCTGCTTCTCCTGCAAAACAACCTCACTGGC 1219
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1090 GATATGTGCAAGAACGGGAAGATGAAAGCTCTGCTTCTCCTGCAAAACAATCTCACTGGC 1149
Query 1220 TCTATCCCTGAGTCCTACGCTAACTGTTTGACTCTGCAACGGTTCAGAGTTAGCGAGAAC 1279
|| |||||||| || ||||||| ||||||||||||| ||||||||||||| |||||||||
Sbjct 1150 TCCATCCCTGACTCGTACGCTAGCTGTTTGACTCTGGAACGGTTCAGAGTAAGCGAGAAC 1209
Query 1280 AAC-CTCAACGGAACTGTTCCCGCGGGACTTTGGGGATTACCGAAGCTCGAGATCATCGA 1338
| || ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1210 -TCGCTTAACGGAACTGTTCCCGCGGGACTTTGGGGCTTACCGAAGCTCGAGATCATCGA 1268
Query 1339 TATAGAGATGAATAACTTCGAAGGTCCAATCACCGCGGATATAAAGAACGGTAAAATGCT 1398
||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct 1269 TATAGAGATGAATAACTTCGAAGGTCCGATCACTGCCGATATAAAGAACGGTAAAATGCT 1328
Query 1399 CGGAGCGTTGTATCTAGGGTTCAACAAGTTGTCTGATGAGCTGCCTGAAGAGATAGGTGA 1458
|||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 1329 CGGAGCATTGTATCTAGGGTTCAACAAGTTGTCTGATGAGCTGCCGGAGGAGATAGGTGA 1388
Query 1459 CACTGAATCTTTGACTAAGGTTGAGCTTAACAATAACCGGTTTACCGGGAAGATTCCTAG 1518
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1389 CACTAAATCTTTGACTAAGGTTGAGCTTAACAATAACCGGTTTACCGGGAAGATTCCGAG 1448
Query 1519 CTCCATTGGGAAACTCAAAGGACTTAGCAGTCTAAAGATGCAGAGCAATGGCTTCTCCGG 1578
||||||||||||||| || |||||||||||||| |||||||||||||||| |||||| ||
Sbjct 1449 CTCCATTGGGAAACTGAAGGGACTTAGCAGTCTGAAGATGCAGAGCAATGACTTCTCTGG 1508
Query 1579 TGAGATACCTGACTCGATTGGTTCGTGCTCGATGCTCAGCGATGTCAACATGGCTCAAAA 1638
||||||||| ||||||||||| || |||||||||||||||||||| ||||||||||||||
Sbjct 1509 TGAGATACCGGACTCGATTGGATCATGCTCGATGCTCAGCGATGTAAACATGGCTCAAAA 1568
Query 1639 CTCGATATCCGGAGAAATCCCCCACACGCTTGGATCACTCCCGACGCTCAACGCTTTGAA 1698
|||| ||||||| |||||||| |||||||||||||| || ||||||||||||||||||||
Sbjct 1569 CTCGCTATCCGGTGAAATCCCGCACACGCTTGGATCTCTTCCGACGCTCAACGCTTTGAA 1628
Query 1699 TCTTTCGGACAATAAGTTGTCTGGGAGAATCCCAGAGAGTTTGTCGTCTTTAAGGCTTAG 1758
|||||| ||||||||| | | ||||||||||||||||||||||||||| ||||||||||
Sbjct 1629 TCTTTCAGACAATAAGCTCACCGGGAGAATCCCAGAGAGTTTGTCGTCTCTAAGGCTTAG 1688
Query 1759 CCTTCTTGATCTGTCTAACAACAGATTATCAGGTCGTATCCCTCTGAGTTTGTCATCATA 1818
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1689 CCTTCTTGATCTGTCTAACAACAGATTATCCGGTCGTATCCCTCTGAGTTTGTCATCATA 1748
Query 1819 TAATGGTAGCTTCAATGGCAATCCTGGCCTCTGTAGCACGACGATCAAATCGTTTAACCG 1878
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct 1749 TAATGGTAGCTTCAATGGCAATCCTGGACTCTGTAGCATGACGATCAAATCGTTTAACCG 1808
Query 1879 GTGCATAAATCCTTCGAGATCGCATGGAGACACTCGCGTGTTCGTGTTGTGTATAGTTTT 1938
||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||
Sbjct 1809 GTGCATAAATCCTTCGAGATCGCATGGAGACACTCGCGTATTCGTGCTGTGTATAGTTTT 1868
Query 1939 CGGGTTACTGATCTTGCTAGCGTCTCTTGTGTTTTTCTTGTACCTGAAGAAAACAGAGAA 1998
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1869 CGGGTCACTGATCTTGCTTGCGTCTCTTGTGTTTTTCTTGTACCTGAAGAAAACAGAGAA 1928
Query 1999 GAAGGAGGGACGTTCGCTTAAACACGAATCTTGGAGTATAAAGTCATTCCGAAAGATGAG 2058
|||||| || ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1929 GAAGGAAGGCCGTTCGCTTAAACACGAGTCTTGGAGTATAAAGTCATTCCGAAAGATGAG 1988
Query 2059 TTTCACTGAAGATGATATCATTGATTCAATCAAAGAAGAGAATTTGATTGGTAGAGGAGG 2118
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct 1989 TTTCACTGAAGATGATATCATCGATTCAATCAAAGAAGAGAATTTGATCGGTAGAGGAGG 2048
Query 2119 TTGTGGGGATGTGTACAGAGTAGTACTTGGTGATGGTAAAGAAGTTGCGGTCAAACACAT 2178
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2049 TTGTGGCGATGTGTACAGAGTAGTACTTGGTGATGGTAAAGAAGTTGCGGTCAAACACAT 2108
Query 2179 CCGGTGTAGTAGTACTCAGAAAAACTTCAGCAGTGCAATGCCGATTCTCACTGAACGGGA 2238
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2109 CCGGTGTAGTAGTACTCAGAAAAATTTCAGCAGTGCAATGCCGATTCTCACTGAACGGGA 2168
Query 2239 GGGAAGATCGAAAGAGTTTGAAACAGAGGTGCAAACGCTTAGTTCGATACGACACTTAAA 2298
||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct 2169 AGGAAGATCGAAGGAGTTTGAAACAGAGGTGCAAACGCTTAGCTCAATACGACACTTAAA 2228
Query 2299 CGTGGTGAAACTCTATTGTAGCATCACGAGCGATGACTCGAGCTTGCTGGTGTACGAGTA 2358
||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2229 TGTGGTAAAACTCTATTGTAGCATCACGAGCGATGACTCAAGCTTGCTGGTGTACGAGTA 2288
Query 2359 CTTGCCTAATGGAAGCTTATGGGACATGCTTCACTCTTGCAAGAAGTCGAATCTTGGTTG 2418
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 2289 CTTGCCTAATGGAAGCTTATGGGACATGCTTCACTCTTGCAAGAAATCGAATCTCGGTTG 2348
Query 2419 GGAAACACGGTATGATATAGCTCTTGGTGCAGCAAAAGGGCTTGAGTACTTGCATCATGG 2478
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2349 GGAAACACGGTATGATATAGCTCTTGGTGCAGCGAAAGGGCTTGAGTACTTGCATCATGG 2408
Query 2479 GTATGAGAGACCGGTGATTCACCGTGATGTTAAGTCCAGTAACATATTGCTAGATGAGTT 2538
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2409 GTATGAGAGACCGGTGATTCACCGTGATGTTAAATCGAGTAACATATTGCTAGATGAGTT 2468
Query 2539 CTTGAAACCTAGAATTGCGGATTTTGGTCTTGCCAAGATTCTTCAGGCCAGCAATGGCGG 2598
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2469 CTTGAAACCTAGGATTGCAGATTTTGGTCTTGCCAAGATTCTTCAGGCCAGCAATGGCGG 2528
Query 2599 TCCAGAGTCCACGCATGTCGTTGCGGGAACCTATGGCTACATAGCTCCAGCAGAGTATGG 2658
|||||| ||||| ||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 2529 TCCAGATTCCACCCATGTCGTTGCGGGAACCTATGGCTACATAGCT-C--CAGAGTATGG 2585
Query 2659 ATATGCGTCAAAAGTGACTGAGAAATGCGATGTATATAGCTTCGGGGTCGTGTTGATGGA 2718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2586 ATATGCGTCAAAAGTGACTGAGAAATGCGATGTATATAGCTTCGGGGTCGTGTTGATGGA 2645
Query 2719 GCTAGTCACAGGGAAAAAACCGATAGAGGCAGAGTTTGGAGAGAGCAAAGACATAGTGAA 2778
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2646 GCTGGTCACAGGGAAAAAACCGATAGAGGCAGAGTTTGGAGAGAGCAAAGACATAGTGAA 2705
Query 2779 TTGGGTGAGCAACAATCTGAAGAGCAAAGAGAGTGTGATGGAGATTGTGGACAAGAAGAT 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2706 TTGGGTGAGCAACAATCTGAAGAGCAAAGAGAGTGTGATGGAGATTGTGGACAAGAAGAT 2765
Query 2839 AGGAGAAATGTATAGAGAAGACGCGGTCAAGATGCTGAGGATTGCGATCATCTGCACCGC 2898
||||||||||||||||||||| || ||||||| ||||||||||| ||| ||||||| ||
Sbjct 2766 AGGAGAAATGTATAGAGAAGATGCAATCAAGATACTGAGGATTGCAATCCTCTGCACGGC 2825
Query 2899 AAGACTTCCTGGACTAAGACCGACGATGAGGAGCGTGGTGCAGATGATCGAGGACGCGGA 2958
|||||||||||||||||||||||||||||||||||||| || |||||||||||||||||
Sbjct 2826 GAGACTTCCTGGACTAAGACCGACGATGAGGAGCGTGGTTCAAATGATCGAGGACGCGGA 2885
Query 2959 ACCTTGCAGATTGATGGGGATTGTGATCAGCAAAGAGAGTGATGTCAAGGTCAAAGAAAT 3018
||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct 2886 ACCATGCAGATTGATGGGGATTGTGATCAGCAAAGAGAGTGATGTGAAGATCAAAGAAAT 2945
Query 3019 AAGTTGATGATTGAGGGACCAA-GTCACTCTTTT 3051
|||||||||||||||||||||| |||||||||||
Sbjct 2946 AAGTTGATGATTGAGGGACCAAAGTCACTCTTTT 2979
> Ahg919769 jgi|Araly1|919769|scaffold_101050.1
Length=2238
Score = 2780 bits (1505), Expect = 0.0
Identities = 1664/1743 (95%), Gaps = 2/1743 (0%)
Strand=Plus/Plus
Query 751 GCTTCGGAATTTGGAGATTTCCGATAGCGGATTAACCGGAGAGATTCCGTCGGAGATTTC 810
||||||||||||||||||| |||||||| | |||||||||||||||||||||||||| ||
Sbjct 33 GCTTCGGAATTTGGAGATTGCCGATAGCAGTTTAACCGGAGAGATTCCGTCGGAGATCTC 92
Query 811 GAAACTTACTAATCTCTGGCAGTTAGAGCTTTACAACAACTCCTTGACCGGAAAACTTCC 870
|||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 93 GAAACTCACCAATCTTTGGCAGTTAGAGCTTTACAACAACTCCTTGACCGGAAAACTTCC 152
Query 871 TACCGGATTCGGAAACTTGAAGAATCTGACTTACTTGGACGCTTCAACAAATCTTCTACA 930
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct 153 TACCGGATTCGGAAACCTGAAGAATCTGACTTACTTGGATGCTTCAACAAATCTTCTACA 212
Query 931 AGGCGATTTATCGGAGCTTAGGTCTCTGACTAATCTCGTTTCACTACAAATGTTCGAAAA 990
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 213 AGGCGATTTATCGGAGCTCAGGTCTCTGACTAATCTCGTTTCACTACAAATGTTCGAAAA 272
Query 991 CGAATTCTCCGGTGAGATTCCGCTGGAGTTTGGTGAATTCAAGGATCTCGTGAATCTCTC 1050
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 273 CGAATTCTCCGGTGAGATTCCGATGGAGTTTGGCGAATTCAAGGATCTCGTGAATCTCTC 332
Query 1051 TCTGTATACAAACAAGTTAACCGGTTCTCTGCCTCAAGGACTCGGTTCACTTGCTGATTT 1110
||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 333 TCTGTATACCAACAAGTTAACCGGTTCTCTGCCTCAAGGACTCGGTTCACTTGCCGATTT 392
Query 1111 TGATTTCATCGACGCATCAGAGAATCTCTTAACCGGACCGATCCCTCCAGATATGTGCAA 1170
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 393 TGATTTCATCGACGCATCAGAGAATCTCTTAACCGGACCTATCCCTCCAGATATGTGCAA 452
Query 1171 GAACGGGAAGATGAAAGCTCTGCTTCTCCTGCAAAACAACCTCACTGGCTCTATCCCTGA 1230
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 453 GAACGGGAAGATGAAAGCTCTGCTTCTCCTGCAAAACAATCTCACTGGCTCCATCCCTGA 512
Query 1231 GTCCTACGCTAACTGTTTGACTCTGCAACGGTTCAGAGTTAGCGAGAACAAC-CTCAACG 1289
|| ||||||| ||||||||||||| ||||||||||||| ||||||||| | || ||||
Sbjct 513 CTCGTACGCTAGCTGTTTGACTCTGGAACGGTTCAGAGTAAGCGAGAAC-TCGCTTAACG 571
Query 1290 GAACTGTTCCCGCGGGACTTTGGGGATTACCGAAGCTCGAGATCATCGATATAGAGATGA 1349
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 572 GAACTGTTCCCGCGGGACTTTGGGGCTTACCGAAGCTCGAGATCATCGATATAGAGATGA 631
Query 1350 ATAACTTCGAAGGTCCAATCACCGCGGATATAAAGAACGGTAAAATGCTCGGAGCGTTGT 1409
|||||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||
Sbjct 632 ATAACTTCGAAGGTCCGATCACTGCCGATATAAAGAACGGTAAAATGCTCGGAGCATTGT 691
Query 1410 ATCTAGGGTTCAACAAGTTGTCTGATGAGCTGCCTGAAGAGATAGGTGACACTGAATCTT 1469
|||||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 692 ATCTAGGGTTCAACAAGTTGTCTGATGAGCTGCCGGAGGAGATAGGTGACACTAAATCTT 751
Query 1470 TGACTAAGGTTGAGCTTAACAATAACCGGTTTACCGGGAAGATTCCTAGCTCCATTGGGA 1529
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 752 TGACTAAGGTTGAGCTTAACAATAACCGGTTTACCGGGAAGATTCCGAGCTCCATTGGGA 811
Query 1530 AACTCAAAGGACTTAGCAGTCTAAAGATGCAGAGCAATGGCTTCTCCGGTGAGATACCTG 1589
|||| || |||||||||||||| |||||||||||||||| |||||| ||||||||||| |
Sbjct 812 AACTGAAGGGACTTAGCAGTCTGAAGATGCAGAGCAATGACTTCTCTGGTGAGATACCGG 871
Query 1590 ACTCGATTGGTTCGTGCTCGATGCTCAGCGATGTCAACATGGCTCAAAACTCGATATCCG 1649
|||||||||| || |||||||||||||||||||| |||||||||||||||||| ||||||
Sbjct 872 ACTCGATTGGATCATGCTCGATGCTCAGCGATGTAAACATGGCTCAAAACTCGCTATCCG 931
Query 1650 GAGAAATCCCCCACACGCTTGGATCACTCCCGACGCTCAACGCTTTGAATCTTTCGGACA 1709
| |||||||| |||||||||||||| || |||||||||||||||||||||||||| ||||
Sbjct 932 GTGAAATCCCGCACACGCTTGGATCTCTTCCGACGCTCAACGCTTTGAATCTTTCAGACA 991
Query 1710 ATAAGTTGTCTGGGAGAATCCCAGAGAGTTTGTCGTCTTTAAGGCTTAGCCTTCTTGATC 1769
||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 992 ATAAGCTCACCGGGAGAATCCCAGAGAGTTTGTCGTCTCTAAGGCTTAGCCTTCTTGATC 1051
Query 1770 TGTCTAACAACAGATTATCAGGTCGTATCCCTCTGAGTTTGTCATCATATAATGGTAGCT 1829
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1052 TGTCTAACAACAGATTATCCGGTCGTATCCCTCTGAGTTTGTCATCATATAATGGTAGCT 1111
Query 1830 TCAATGGCAATCCTGGCCTCTGTAGCACGACGATCAAATCGTTTAACCGGTGCATAAATC 1889
|||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1112 TCAATGGCAATCCTGGACTCTGTAGCATGACGATCAAATCGTTTAACCGGTGCATAAATC 1171
Query 1890 CTTCGAGATCGCATGGAGACACTCGCGTGTTCGTGTTGTGTATAGTTTTCGGGTTACTGA 1949
|||||||||||||||||||||||||||| |||||| |||||||||||||||||| |||||
Sbjct 1172 CTTCGAGATCGCATGGAGACACTCGCGTATTCGTGCTGTGTATAGTTTTCGGGTCACTGA 1231
Query 1950 TCTTGCTAGCGTCTCTTGTGTTTTTCTTGTACCTGAAGAAAACAGAGAAGAAGGAGGGAC 2009
||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 1232 TCTTGCTTGCGTCTCTTGTGTTTTTCTTGTACCTGAAGAAAACAGAGAAGAAGGAAGGCC 1291
Query 2010 GTTCGCTTAAACACGAATCTTGGAGTATAAAGTCATTCCGAAAGATGAGTTTCACTGAAG 2069
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1292 GTTCGCTTAAACACGAGTCTTGGAGTATAAAGTCATTCCGAAAGATGAGTTTCACTGAAG 1351
Query 2070 ATGATATCATTGATTCAATCAAAGAAGAGAATTTGATTGGTAGAGGAGGTTGTGGGGATG 2129
|||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 1352 ATGATATCATCGATTCAATCAAAGAAGAGAATTTGATCGGTAGAGGAGGTTGTGGCGATG 1411
Query 2130 TGTACAGAGTAGTACTTGGTGATGGTAAAGAAGTTGCGGTCAAACACATCCGGTGTAGTA 2189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1412 TGTACAGAGTAGTACTTGGTGATGGTAAAGAAGTTGCGGTCAAACACATCCGGTGTAGTA 1471
Query 2190 GTACTCAGAAAAACTTCAGCAGTGCAATGCCGATTCTCACTGAACGGGAGGGAAGATCGA 2249
||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1472 GTACTCAGAAAAATTTCAGCAGTGCAATGCCGATTCTCACTGAACGGGAAGGAAGATCGA 1531
Query 2250 AAGAGTTTGAAACAGAGGTGCAAACGCTTAGTTCGATACGACACTTAAACGTGGTGAAAC 2309
| ||||||||||||||||||||||||||||| || |||||||||||||| ||||| ||||
Sbjct 1532 AGGAGTTTGAAACAGAGGTGCAAACGCTTAGCTCAATACGACACTTAAATGTGGTAAAAC 1591
Query 2310 TCTATTGTAGCATCACGAGCGATGACTCGAGCTTGCTGGTGTACGAGTACTTGCCTAATG 2369
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1592 TCTATTGTAGCATCACGAGCGATGACTCAAGCTTGCTGGTGTACGAGTACTTGCCTAATG 1651
Query 2370 GAAGCTTATGGGACATGCTTCACTCTTGCAAGAAGTCGAATCTTGGTTGGGAAACACGGT 2429
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct 1652 GAAGCTTATGGGACATGCTTCACTCTTGCAAGAAATCGAATCTCGGTTGGGAAACACGGT 1711
Query 2430 ATGATATAGCTCTTGGTGCAGCAAAAGGGCTTGAGTACTTGCATCATGGGTATGAGAGAC 2489
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 1712 ATGATATAGCTCTTGGTGCAGCGAAAGGGCTTGAGTACTTGCATCATGGGTATGAGAGAC 1771
Query 2490 CGG 2492
|||
Sbjct 1772 CGG 1774
Score = 752 bits (407), Expect = 0.0
Identities = 449/469 (96%), Gaps = 4/469 (1%)
Strand=Plus/Plus
Query 2584 GGCCAGCAATGGCGGTCCAGAGTCCACGCATGTCGTTGCGGGAACCTATGGCTACATAGC 2643
||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 1773 GGCCAGCAATGGCGGTCCAGATTCCACCCATGTCGTTGCGGGAACCTATGGCTACATAGC 1832
Query 2644 TCCAGCAGAGTATGGATATGCGTCAAAAGTGACTGAGAAATGCGATGTATATAGCTTCGG 2703
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1833 T-C--CAGAGTATGGATATGCGTCAAAAGTGACTGAGAAATGCGATGTATATAGCTTCGG 1889
Query 2704 GGTCGTGTTGATGGAGCTAGTCACAGGGAAAAAACCGATAGAGGCAGAGTTTGGAGAGAG 2763
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1890 GGTCGTGTTGATGGAGCTGGTCACAGGGAAAAAACCGATAGAGGCAGAGTTTGGAGAGAG 1949
Query 2764 CAAAGACATAGTGAATTGGGTGAGCAACAATCTGAAGAGCAAAGAGAGTGTGATGGAGAT 2823
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1950 CAAAGACATAGTGAATTGGGTGAGCAACAATCTGAAGAGCAAAGAGAGTGTGATGGAGAT 2009
Query 2824 TGTGGACAAGAAGATAGGAGAAATGTATAGAGAAGACGCGGTCAAGATGCTGAGGATTGC 2883
|||||||||||||||||||||||||||||||||||| || ||||||| |||||||||||
Sbjct 2010 TGTGGACAAGAAGATAGGAGAAATGTATAGAGAAGATGCAATCAAGATACTGAGGATTGC 2069
Query 2884 GATCATCTGCACCGCAAGACTTCCTGGACTAAGACCGACGATGAGGAGCGTGGTGCAGAT 2943
||| ||||||| || |||||||||||||||||||||||||||||||||||||| || ||
Sbjct 2070 AATCCTCTGCACGGCGAGACTTCCTGGACTAAGACCGACGATGAGGAGCGTGGTTCAAAT 2129
Query 2944 GATCGAGGACGCGGAACCTTGCAGATTGATGGGGATTGTGATCAGCAAAGAGAGTGATGT 3003
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2130 GATCGAGGACGCGGAACCATGCAGATTGATGGGGATTGTGATCAGCAAAGAGAGTGATGT 2189
Query 3004 CAAGGTCAAAGAAATAAGTTGATGATTGAGGGACCAA-GTCACTCTTTT 3051
||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2190 GAAGATCAAAGAAATAAGTTGATGATTGAGGGACCAAAGTCACTCTTTT 2238
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 122697615352
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5