BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10450.1
Length=4024
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471159 jgi|Araly1|471159|fgenesh2_kg.1__1113__AT1G10450.1 5686 0.0
Ahg334309 jgi|Araly1|334309|fgenesh1_pg.C_scaffold_1000874 774 0.0
Ahg925075 jgi|Araly1|925075|scaffold_200636.1 490 3e-137
> Ahg471159 jgi|Araly1|471159|fgenesh2_kg.1__1113__AT1G10450.1
Length=3734
Score = 5686 bits (3079), Expect = 0.0
Identities = 3492/3686 (95%), Gaps = 49/3686 (1%)
Strand=Plus/Plus
Query 312 AGAAATCAGTCTGCGGGAGAAAGTGGAAGAAGACTGAAGATGAAGAGAGCTAGAGAAGAT 371
|||||||||||||||||||||| || |||||| |||||||||||||| ||||||||||
Sbjct 76 AGAAATCAGTCTGCGGGAGAAA---GAGGAAGAC-GAAGATGAAGAGAGTTAGAGAAGAT 131
Query 372 GTTCACACTG-ACACTCAA-AAGCGAAAGCCTGAAGTTTCGTCTCGAGGAGAAACAAACA 429
|||||||||| || || || ||||||| ||||||||||||||||||||||||||||||||
Sbjct 132 GTTCACACTGAAC-CT-AATAAGCGAAGGCCTGAAGTTTCGTCTCGAGGAGAAACAAACA 189
Query 430 AGCTACCTCGAACCATCGATGCCCTAACGTATCTCAAAGCTGTGAAGGATATTTTTCACG 489
||| |||||||||| |||||||||||||||||||||||||||| ||||| |||||||| |
Sbjct 190 AGCAACCTCGAACCGTCGATGCCCTAACGTATCTCAAAGCTGTTAAGGACATTTTTCAAG 249
Query 490 ACAATAAAGAGAAATATGAGTCATTCCTGGAGCTCATGAAGGAGTTCAAAGCTCAGACAA 549
|||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| ||||
Sbjct 250 ACAATAAAGAGAAATATGAGTCTTTCCTTGAGCTCATGAAGGAGTTTAAAGCTCATACAA 309
Query 550 TCGACACTAATGGTGTCATAGAAAGGATTAAAGTGTTGTTCAAGGGTTACAGGGACCTAC 609
|||||||| |||||||||| ||||| |||||||| |||||||||||||| | ||||||||
Sbjct 310 TCGACACTGATGGTGTCATTGAAAGAATTAAAGTATTGTTCAAGGGTTATAAGGACCTAC 369
Query 610 TTTTGGGTTTTAATACTTTCTTGCCCAAAGGGTATAAAATAACCCTTCTGCCAGAGGAAG 669
|||| |||||||||||||||||||||||||| |||| ||||||||||||||| |||||||
Sbjct 370 TTTTAGGTTTTAATACTTTCTTGCCCAAAGGCTATAGAATAACCCTTCTGCCGGAGGAAG 429
Query 670 AGAAGCCTAAGATCCGGGTGGATTTCAAAGACGCTATCGGTTTCGTCACCAAGATTAAGA 729
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 430 AGAAGCCTAAGGTCCGGGTGGATTTCAAAGACGCTATCGGTTTCGTCACCAAGATTAAGA 489
Query 730 CGAGGTTTGGAGATGATGAACATGCGTATAAACGGTTTCTAGACATCTTGAACTTGTATA 789
||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 490 CGAGGTTCGGAGATGATGAACATGCGTATAAAAGGTTTCTAGACATCTTGAACATGTATA 549
Query 790 GAAAGGAGAA-AAAGTCCATCTCTGAGGTCTACGAAGAGGTTACTATGTTATTCAAGGGT 848
||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 550 GAAAGGA-AAGAAAGTCCATCTCTGAGGTCTACGAAGAGGTTACTATGTTATTCAAGGGT 608
Query 849 CATGAAGATCTGCTTATGGAGTTCGTTAATTTCTTACCTAATTGTCCAGAATCAGCTCCC 908
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 609 CATGAAGATCTGCTCATGGAGTTCGTTAATTTCTTACCTAACTGTCCAGAATCAGCTCCC 668
Query 909 TCGACAAAGAATGCAGTACCGCGTCACAAGGGCACTGCAACTACTGCCATGCATTCTGAT 968
||| |||| |||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct 669 TCGGCAAATAATGCAGTGCCGCGTCACAAGGGCACTGCAATTACTGCCATGCATTCTGAT 728
Query 969 AAGAAAAGAAAACAACGATGTAAGCTTGAGGATTATTCTGGACACTCTGATCAACGAGAA 1028
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 729 AAGAAAAGAAAACAACGACGTAAGCTTGAGGATTATTCTGGACACTCTGATCAACGAGAA 788
Query 1029 GATGGTGATGAGAATCTTGTCACTTGCTCCGCTGACTCCCCTGTCGGGGAAGGTCAGCCA 1088
||||||||||||||||||||| |||||||||||||||||||||| || ||||||||||||
Sbjct 789 GATGGTGATGAGAATCTTGTCGCTTGCTCCGCTGACTCCCCTGTTGGAGAAGGTCAGCCA 848
Query 1089 GGATACTTTCGAGATTATGAAAATAGAGAAGATACTGAAACAGATACAGCAGATAGAACT 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 849 GGATACTTTCGAGATTATGAAAATAGAGAAGATACTGAAACAGATACAGCAGATAGAACT 908
Query 1149 GAAAAAAGTGCAGCATCTGGCAGTCAAGATATCGGAAATCACAAATCGACTACCAAGTAT 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 909 GAAAAAAGTGCAGCATCTGGCAGTCAAGATATCGGAAATCACAAATCGACTACCAAGTAT 968
Query 1209 GTGGGAACACCTATAAATGAGCTTGATCTTTCTGAATGCACTCAGTGTACCCCAAGTTAT 1268
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 969 GTGGGAACACCTATAAATGAGCTTGATCTTTCTGAGTGCACTCAGTGTACCCCAAGTTAT 1028
Query 1269 CGACTCCTGCCAAAGGATTATGCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAA 1328
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1029 CGACTCCTGCCAAAGGATTATGCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAA 1088
Query 1329 AAGACACTCAATGACCACTTGGTATCTGTCACTTCAGGGAGTGAAGATTACTCATTCAGT 1388
|||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct 1089 AAGACACTCAATGACCACCTGGTATCTGTCACCTCAGGGAGTGAAGATTACTCATTCAGT 1148
Query 1389 CATATGCGCAAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGACAGGTATGAA 1448
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1149 CATATGCGCAAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGACAGGTATGAA 1208
Query 1449 ATGGACATGTTACTAGGATCTGTAAGTTCAGCCATTAAACAGGTGGAAATCCTTCTCGAA 1508
||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct 1209 ATGGACATGTTACTAGGATCTGTAAGTTCAGCCATTAAACACGTGGAAATTCTTCTCGAG 1268
Query 1509 AAGATGAACAACAACACTATCTCAGTAGACTCTACTATATGTATCGAAAAACACTTATCA 1568
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1269 AAGATGAACAACAATACTATCTCAGTAGACTCTACTATATGTATCGAAAAACACTTATCA 1328
Query 1569 GCTATGAACTTAAGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGAT 1628
||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1329 GCTATAAACTTGAGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGAT 1388
Query 1629 CTTTTGAAGAAGAATATGCATAGCGCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAG 1688
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1389 CTTTTGAAGAAGAATATGCATAGCGCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAG 1448
Query 1689 CAAGAAGAATGGGCAAGGTGCCATTCTGATTTCCAGAAAGTTTGGGCAGAAGTATATGCT 1748
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 1449 CAAGAAGAATGGGCAAGGTGCCACTCTGATTTCCAGAAAGTTTGGGCTGAAGTATATGCT 1508
Query 1749 AAGAATCACCATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAG 1808
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1509 AAGAATCACCATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCTAAG 1568
Query 1809 AACTTGAGCACAAAATGTTTAGTGGCAGAAGTGAAAGATATCAGTGAGAAAAAGCATCAA 1868
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1569 AACTTGAGCACAAAATGTTTAGTGGCAGAAGTAAAAGATATCAGTGAGAAAAAGCATCAA 1628
Query 1869 GAAGATCTGCTTCAAGCTATTGCTGTTAGAGTTATGCCCTTATTTACTCCTGATTTGGAG 1928
||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||
Sbjct 1629 GAAGATCTGCTTCAAGCTATTTCTGTTAGAGTTATGCCCTCATTTACTCCGGATTTGGAG 1688
Query 1929 TTCAATTATTGTGATACACAAATTCACGAGGATCTATATCTGCTAATCAAGTATTACTGT 1988
||||| |||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1689 TTCAACTATTGTGATATACAAATTCACGAGGATCTCTATCTGCTAATCAAGTATTACTGT 1748
Query 1989 GAAGAAATATGTGCCACTGAACAATCAGATAAGGTAATGAAGCTGTGGATAACCTTTTTG 2048
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1749 GAAGAAATATGTGCCACTGAACAATCAGATAAGGTGATGAAGCTGTGGATAACCTTTTTA 1808
Query 2049 GAGCCCATCTTTGGCATTCTTTCGAGGTCTCAAGATAACCTTGCTCTGGAAGATGTGTCA 2108
|||||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct 1809 GAGCCCATGTTTGGCATTCTTTCGAGGTCTCAAGGTAACCATGCTCTGGAAGATGTGTCA 1868
Query 2109 AAGTTGAAAAACAACCGAGAATTGCAAGATGCATGTTTGGCAGTGAAGGAGACAGCTTCT 2168
|||||||||||||||| |||||||||||||||||| ||||||||||||| |||||||||
Sbjct 1869 AAGTTGAAAAACAACCAAGAATTGCAAGATGCATGCGTGGCAGTGAAGGACACAGCTTCT 1928
Query 2169 GGGTCAAACCGTAAACATCCAATATCCCCGAAACGACTGAGCAAAGATAATACAAAAATG 2228
|||||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||
Sbjct 1929 GGGTCAAACCTTAAACATCCAATATCCCCGAAACTACTGAACAAAGATAATTCAACAATG 1988
Query 2229 CAAGGAAGTTCTTCTCGGGAAGATGTCTCAGCCAATATAAAAGTGAAAACTGCCCAGCCC 2288
|||||||||||| ||||| ||||||||||||| ||||||| |||||||||| ||||||
Sbjct 1989 CAAGGAAGTTCTCCTCGGAAAGATGTCTCAGCGAATATAA---TGAAAACTGCTCAGCCC 2045
Query 2289 GATAAGCTTCAGGATGATGCAGCTATGACTAATGAGGTTATCCAGTCTTCCAAATTTGTG 2348
|||||||| |||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 2046 GATAAGCTGCAGGATGATGCAGCTATGACTAATGAGGTTATTCAGTCTTCCAAACTTGTG 2105
Query 2349 TCACCCAAAAATGACCAGATAATGGAGGATGAAGGGAATCATATGGTTAACGCAGCATCG 2408
||||||| |||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 2106 TCACCCAGAAATGATCAGATAATGGAGGATGAAGGGAATCATATGGTTAACGAAGCATCG 2165
Query 2409 GTGGAAAAGCATGAGCT--AG--A-A-GAGGGTGAATTATCTCCCACCGCCAGTCGTGAG 2462
||||||||||||||| | || | | ||||||||||||||||||||| |||||||||||
Sbjct 2166 GTGGAAAAGCATGAGGTTGAGCGAGAAGAGGGTGAATTATCTCCCACCCCCAGTCGTGAG 2225
Query 2463 CAAAGCAACTTTGAGGTTAATGGACAGAATGCCTTCAAGCCTTTACAAAAGGTGACGGAC 2522
||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2226 CAAGGCAACTTTGAGGTTAATGGACAGAATGGCTTCAAGCCTTTACAAAAGGTGACGGAC 2285
Query 2523 AATGTAAGAAGCAATAAAGACAAGCAAAGTTGTGATAAAAAGGGAGCAAAGAACAAAACT 2582
||||||||||||||||||||| ||||||||||||||| |||||||||||||||| | |||
Sbjct 2286 AATGTAAGAAGCAATAAAGACCAGCAAAGTTGTGATATAAAGGGAGCAAAGAACGATACT 2345
Query 2583 CGCGCTGAAGATGACAAACAAGAAAATTGTCACAAGTTATCAGAGAATAATAAGACTGCC 2642
|||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 2346 CGCGGTGAAGATGACAAACAAGAAAATTGTCACAAGTTATCAGAGGATAATGAGACTGCC 2405
Query 2643 TCTGAAATGCTTGTTTCAGGAACCAAGGTTAGTTGTCATGAAGAGAACAACAGAGTTATG 2702
||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |
Sbjct 2406 TCTGAAATGCTTGTTTCAGGAACCAAGTTTAGTTGTCATGAAGAGCACAACAGAGTTACG 2465
Query 2703 AACTGTAATGGGCGTGGTAGTGTGGCTGGAGAGATGGCTAATGGAAATCAAGGTGAAGAT 2762
||||||||||||||||||||||| |||||||||||||||| ||||||| |||||||||||
Sbjct 2466 AACTGTAATGGGCGTGGTAGTGTTGCTGGAGAGATGGCTAGTGGAAATGAAGGTGAAGAT 2525
Query 2763 GGATCCTTCGCATTTTCAGAACGGTTTCTGCAAACTGTAAAACCTGTTGCCAAGCATCTG 2822
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2526 GGATCCTTTGCATTTTCAGAACGGTTTCTGCAAACTGTAAAACCTGTTGCCAAGCATCTG 2585
Query 2823 TCTTGGCCATTGCAAGCTAGTGAAACTTGCTCCCAGAATGATTCTCAAGTTTTTTACGGG 2882
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2586 TCTTGGCCATTGCAAGCTAGTGAAACTTGCTCCCAAAATGATTCTCAAGTTTTTTACGGG 2645
Query 2883 AATGATTCCTATTATGTGCTATTTAGGCTTCATCAAATGTTGTACGAGAGAATACAAACA 2942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2646 AATGATTCCTATTATGTGCTATTTAGGCTTCATCAAATGTTGTACGAGAGAATACAAACA 2705
Query 2943 GCAAAGAAACATTCAGAAAAGAAATGGAAGGCTGCAGATAACACGACTCCTGATTCTTAT 3002
||||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||
Sbjct 2706 GCAAAGAAACATTCAGAAAAGAAGTGGAAGGCTCCAGATAACACAACTCCTGATTCTTAT 2765
Query 3003 CCCAGGTTCATGGATGCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTT 3062
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2766 CCCAGGTTCATGGATGCACTCTATAATTTACTTGACGGTTCTATTGACAATACAAAGTTT 2825
Query 3063 GAAGATGAGTGCCGAGCTATTTTTGGAGCACAGTCATATGTTCTTTTCACATTGGACAAG 3122
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2826 GAAGATGAGTGCCGAGCTATTTTTGGAGCACAGTCGTATGTTCTTTTCACATTGGACAAG 2885
Query 3123 CTAGTTCAGAAGTTTGTTAAGCATCTCCATTCGGTTGCATCTGATGAAACAGACACCAAG 3182
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 2886 CTAGTTCAGAAGTTTGTTAAGCATCTCCATGCGGTTGCATCTGATGAAACAGACACCAAG 2945
Query 3183 CTTCTGCAACTACATGCGTATGAGAACTACAGAAAACCTGGAAAATTCTTTGATCTAGTG 3242
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 2946 CTTCTGCAACTACATGCGTATGAGAACTACAGAAAACCAGGAAAATTCTTTGATCTTGTG 3005
Query 3243 TATCATGAGAATGCATGTGCCCTCCTCCATGAGGCAAACATATACCGGATCAGATATTCA 3302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3006 TATCATGAGAATGCATGTGCCCTCCTCCATGAGGCAAACATATACCGGATCAGATATTCA 3065
Query 3303 TCAGAAGGAACACGTCTCTCGATTCAGCTTATGAACAGTGGGAACAATCAGCTTGAAGTA 3362
|||| || |||||||||||||||||||||||||||||| ||||||||||||| |||||||
Sbjct 3066 TCAGCAGAAACACGTCTCTCGATTCAGCTTATGAACAGCGGGAACAATCAGCCTGAAGTA 3125
Query 3363 ATGGGTGTAGCGATGGAGCC-GGCATTTGCAGATTATCTACAAAATAAATGTCTGAAATC 3421
|||||||||||||||||||| || |||||||||||||||||||| |||| |||||||||
Sbjct 3126 ATGGGTGTAGCGATGGAGCCAGGT-TTTGCAGATTATCTACAAAAGAAATTTCTGAAATC 3184
Query 3422 CGTCAATGATGAAGAGAATCACGGACTGTTTCTGAACAGGAACAAAAAGAAATTCACCAG 3481
|||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||
Sbjct 3185 CGTCAATGATGAAGAGAATCACGGACTGTTTCTGAAAAGGAACAAGAAGAAATTCACCAG 3244
Query 3482 CTTAGATGAATCTAGGGGGATGCCTGTTGCGATGGAAAGATTGAATATTATCAACGAGAT 3541
||||||||||||| |||||||||| |||||||||||| ||||| ||||||||||||||||
Sbjct 3245 CTTAGATGAATCTCGGGGGATGCCCGTTGCGATGGAAGGATTGCATATTATCAACGAGAT 3304
Query 3542 GGAATGTAGGATGGCTTGCAGTTCTTCAAAGGTGAAGTACGTAGCAAATACATCAGATCT 3601
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct 3305 GGAATGTAATATGGCTTGCAGTTCTTCAAAGGTGAAGTATGTAGCAAATACATCAGATGT 3364
Query 3602 TTTGTACAGAAGCAAACAGGGGAAACCGAATTCAAGAGTTAGTGAAATCTTGAAACAGAG 3661
|||||| || |||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 3365 TTTGTATAGGAGCAAACAGGGGAAACCGAATTTAAGAGTCGGTGAAATCTTGAAACAGAG 3424
Query 3662 AAGAATATCGCGGTTTCACATAATGCTGAATTGCAGACTTTGTGCCTTGCCTC-T--ATA 3718
||| ||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct 3425 AAGGATATCGCGGTTTCACATAATGCTGAATTGCAGACTTTGTGCCTTGCCTCCTCTATA 3484
Query 3719 AACTGGTGTTAGTGTGGAGGTCCTTAATGGTAAAGACTCTTTGGCTCTTAAAGATTATGC 3778
||||||||||||||| ||||| ||||||||||||| ||| |||||||||| |||||||||
Sbjct 3485 AACTGGTGTTAGTGTCGAGGTTCTTAATGGTAAAGGCTCGTTGGCTCTTAGAGATTATGC 3544
Query 3779 AAACTTTTGGTGGTAGAAAAGAAGTTAACTTGTTTTTAAAGTGACATGGACTGGGATCAT 3838
||| |||| | ||| || |||||||| ||||||||||||||||||||
Sbjct 3545 AAA-----------AGAA--GT--TTA-CTCGTTTTTAACGTGACATGGACTGGGATCAT 3588
Query 3839 ATGGCTCATGATTCACTACGCGGCTACTCCACAttttttgtttgtttttctttttt-ctt 3897
|||||||||| || |||||||||||||||||||||||||||||||||||||||||| | |
Sbjct 3589 ATGGCTCATGGTTAACTACGCGGCTACTCCACATTTTTTGTTTGTTTTTCTTTTTTGCGT 3648
Query 3898 tttGCGTTTGGAGCCGTCAGTTTTGGTGTATAGTTGTA---TT--AG-A-A-TATGTGAT 3949
|||||||| |||| | || |||||||| |||||||||| || || | | ||| ||||
Sbjct 3649 TTTGCGTTCGGAGTCTTCGGTTTTGGTATATAGTTGTAGACTTGTAGTAGAATATATGAT 3708
Query 3950 ACGAAAGTTGCCAAAATCGAAAGACT 3975
||||||||||||||||||||||||||
Sbjct 3709 ACGAAAGTTGCCAAAATCGAAAGACT 3734
> Ahg334309 jgi|Araly1|334309|fgenesh1_pg.C_scaffold_1000874
Length=639
Score = 774 bits (419), Expect = 0.0
Identities = 451/466 (97%), Gaps = 3/466 (1%)
Strand=Plus/Plus
Query 2912 TCATCAAATGTTGTACGAGAGAATAC-AAACAGCAAAGAAACATTCAGAAAAGAAATGGA 2970
|||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 164 TCATCAAATGTTGTACGAGAGAATACAAAACAACAAAGAAACATTCAGAAAAGAAATGGA 223
Query 2971 AGGCTGCAGATAACACGACTCCTGATTCTTATCCCAGGTTCATGGATGCACTCTATAATT 3030
||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 224 AGGCTCCAGATAACACGACTCTTGATTCTTATCCCAGGTTCATGGATGCACTCTATAATT 283
Query 3031 TACTTGACGGTTCTATTGACAATACAAAGTTTGAAGATGAGTGCCGAGCTATTTTTGGAG 3090
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 284 TACTTGACGGTTCTATTGACAATACCAAGTTTGAAGATGAGTGCCGAGCTATTTTTGGAG 343
Query 3091 CACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGTTTGTTAAGCATCTCC 3150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 344 CACAGTCATATGTTCTTTTCACATTGGACAAGCTAGTTCAGAAGTTTGTTAAGCATCTCC 403
Query 3151 ATTCGGTTGCATCTGATGAAACAGACACCAAGCTTCTGCAACTACATGCGTATGAGAACT 3210
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 ATGCGGTTGCATCTGATGAAACAGACACCAAGCTTCTGCAACTACATGCGTATGAGAACT 463
Query 3211 ACAGAAAACCTGGAAAATTCTTTGATCTAGTGTATCATGAGAATGCATGTGCCCTCCTCC 3270
|||||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct 464 ACAGAAAACCGGGAAAATTCTTTGATATAGTGTATCATGAGAATGCATGTGCCATCCTCC 523
Query 3271 ATGAGGCAAACATATACCGGATCAGATATTCATCAGAAGGAA-CACGTCTCTCGATTCAG 3329
|||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||
Sbjct 524 ATGAGGCAAACATATACCAGATCAGATATTCATCAGC-GGAAACACGTCTCTCGATTCAG 582
Query 3330 CTTATGAACAGTGGGAACAATCAGCTTGAAGTAATGGGTGTAGCGA 3375
||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct 583 CTTATGAACAGCGGGAACAATCAGCCTGAAGTAATGGGTGTAGCGA 628
Score = 195 bits (105), Expect = 3e-48
Identities = 144/161 (89%), Gaps = 10/161 (6%)
Strand=Plus/Plus
Query 2370 ATGGAGGATGAAGGGAATCATATGGTTAACGCA-GCATCGGTGGAAAAGCATGAG----- 2423
|||||||||||||||||||||||||||| || | ||||| |||||||||||||||
Sbjct 1 ATGGAGGATGAAGGGAATCATATGGTTA-CGGAAGCATCAGTGGAAAAGCATGAGGTTGA 59
Query 2424 -CTAGAAGAGGGTGAATTATCTCCCACCGCCAGTCGTGAGCAAAGCAACTTTGAGGTTAA 2482
||||||||||||||||||||||| ||||||||| |||||||| |||| |||||||||||
Sbjct 60 GCTAGAAGAGGGTGAATTATCTCC-ACCGCCAGTTGTGAGCAAGGCAATTTTGAGGTTAA 118
Query 2483 TGGACAGAATGCCTTCAAGCCTTTACAAAAGGTGACGGACA 2523
||||||||||| ||||||||||||||| ||| |||||||||
Sbjct 119 TGGACAGAATGGCTTCAAGCCTTTACATAAG-TGACGGACA 158
> Ahg925075 jgi|Araly1|925075|scaffold_200636.1
Length=3500
Score = 490 bits (265), Expect = 3e-137
Identities = 1076/1446 (74%), Gaps = 141/1446 (10%)
Strand=Plus/Plus
Query 1581 AGATGCATTGAGCGGTTATACGGTGATAATGGGCTTGATGTCATGGATCTTTTGAAGAAG 1640
||||||||||||||||||||||| ||| |||||||||||||| ||||| |||||||||||
Sbjct 1150 AGATGCATTGAGCGGTTATACGGGGATTATGGGCTTGATGTCGTGGATTTTTTGAAGAAG 1209
Query 1641 A-ATATGCATAGC-GCTTTACCGGTGATACTAACGCGCTTGAAGCAGAAGCAAGAAGAAT 1698
| | | |||| | || ||||||||||||||||| ||||||||||| || ||| ||||||
Sbjct 1210 AGTTCT-CATA-CTGCCTTACCGGTGATACTAACACGCTTGAAGCAAAAACAAAAAGAAT 1267
Query 1699 GGGCAAGGTGCCATTCTGATTTCCA-GAAAGTTTGGGCAGAAGTATATGCTAAGAATCAC 1757
|||| ||||| | |||||||| || |||||| ||||| ||||||||||||||||||||
Sbjct 1268 GGGCTAGGTGTCGCTCTGATTT-CAGGAAAGTATGGGCTGAAGTATATGCTAAGAATCAT 1326
Query 1758 CATAAGTCACTAGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAACTTGAGC 1817
|| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1327 CAAAAATCACTCGATCATCGTAGTTTCTATTTCAAGCAGCAGGACTCCAAGAATTTGAGC 1386
Query 1818 ACAAAATGTTTAGTGGCAGAAGTGAAAGATATCAGTGAGAAAAAGCATCAAGAAGATCTG 1877
|||||| |||||||||| ||| | ||||||||||| |||| |||||| ||||||| ||
Sbjct 1387 ACAAAAGGTTTAGTGGCGGAAATTAAAGATATCAGCGAGAGGAAGCATAAAGAAGACCTT 1446
Query 1878 CTTCAAGCTATTGCTGTTAGAGTTATGCCCTTATTT-ACTCCTGATTTGGAGTTCAATTA 1936
||| || |||||||| || || ||| ||| || || ||| ||||||| | |||
Sbjct 1447 ATTCGTGCCGTTGCTGTTGGAAATAAACCCGC-TTTCACCCCAGATATGGAGTTTAGTTA 1505
Query 1937 TTGTGATACACAAATTCACGAG-GATCTATATCTGCTAATCAAGTATTACTGTGAAGAAA 1995
| |||||||||| |||| | || ||||||| |||||||||||||| ||||||||||
Sbjct 1506 TACTGATACACAAGTTCAT-ACTGACCTATATCAACTAATCAAGTATTATTGTGAAGAAA 1564
Query 1996 TATGTGCCACTGAACAATCAGATAAGGTAATGAAGCTGTGGATAACCTTTTTGGAGCCCA 2055
||| ||| |||||||| | ||||| || ||| |||||||| |||| |||||||| || |
Sbjct 1565 TATATGCTACTGAACAGGCGGATAAAGTCATGGAGCTGTGGGTAACTTTTTTGGAACCAA 1624
Query 2056 T-CTTTGGCATTCTTTCGAGGTCTCAAGA-TAACCTTG-CTCTGGAAG-ATGT-GTCAAA 2110
| ||| || ||| ||| ||||||||| | ||| | | || ||| |||| | ||||
Sbjct 1625 TGCTT-GGTGTTCCTTCTAGGTCTCAA-ACTAATGA-GACAATG-AAGGATGTTG-CAAA 1679
Query 2111 GT-T-GAAAAACAACCGAGAATTGCAAGATGCATGTTTGGCAGTGAAGGAGA-CA---G- 2163
| | ||| | ||||| || || ||||||||| |||||||||||| | || |
Sbjct 1680 -TATCGAAGA-CAACCAAGCGCACCATGATGCATGTGAGGCAGTGAAGGAAAACACATGT 1737
Query 2164 --C--TTCTG-GGTC--AAACCGTAAACA-TCCAATATCC-CCGAAA-CGACTGAGCAAA 2213
| |||| || | ||||| ||||| | || | || || ||| || || | ||||
Sbjct 1738 GACGGTTCTTTGGCCTTAAACCTTAAACCGTT-AACA-CCTCCAAAATCGCCTAA-CAAA 1794
Query 2214 GATAATACAAAAATGCAAGGAAGTTCTTCTCGGGAAGATGTCTCAGC-CAATATAAAAGT 2272
|| || ||| | | |||||||| |||| || | ||||| || || | ||||| | ||
Sbjct 1795 GAAAACCCAATATTACAAGGAAGCTCTTTTCCGCAAGATATCCCA-CTCAATACACTAG- 1852
Query 2273 GAAAAC-TGCCCAGCCCGATAAGCTTCAGGATGATGCAGCTATGACTAATGAGGTT---- 2327
||| | | | | | ||||| | || |||| |||| |||| ||||||||||||
Sbjct 1853 -AAAGCATTC--ATCAAGATAAAATGCATGATGGTGCAACTATAACTAATGAGGTTCTGC 1909
Query 2328 A---T--CCAGTCTTCCAAATTTGTGTCACCCAAAAATGACCA-GATAATGGAGGATGAA 2381
| | |||| |||||||| | |||||||||| |||||| | ||||||| ||| || |
Sbjct 1910 AGGATAGCCAGCCTTCCAAACTGGTGTCACCCAGAAATGAT-ATGATAATGAAGGGTGTA 1968
Query 2382 GGGAATCATA-T--GGTTAACGCA-GCATCGGTGGAAAAGCATGAGCT--AG----AAGA 2431
| |||| || | ||||| | | | ||| ||| | ||||| || | || ||||
Sbjct 1969 GAGAATTGTAGTAAGGTTAGTG-ATGTATCAATGGGAGAGCATAAGGTCGAGCGTGAAGA 2027
Query 2432 GGGTGAATTATCTCCCACCGCCAGTCGT-GAGCAAAGCAACT-TTGAGGTTAATGGACAG 2489
|||||||||||||||||| | | | | ||||| | || | |||||||| || | ||
Sbjct 2028 GGGTGAATTATCTCCCACTGAAATTT-TCGAGCAC-GAAAATATTGAGGTTTATAAAGAG 2085
Query 2490 AATGC-CTTCAAGCCTTTACA-AAAGGTGACGGACAATGTAAGAAGCAATAAAGA-CAAG 2546
|||| || | ||||| |||| ||| || | ||||||| || ||| |||||||| | ||
Sbjct 2086 AATGGGCT-CGAGCCTGTACAGAAAC-TGCCAGACAATGAAATAAGTAATAAAGATCGAG 2143
Query 2547 ----CAAAGTTG-TG-ATAA---A---AAG--GGAGCAAAGAA-CAAAACTCGCGC-TGA 2590
||||| | || ||| | ||| ||||||| ||| ||| | || | |||
Sbjct 2144 AATACAAAGAGGGTGCATATGGTACTGAAGCTGGAGCAA-GAAGCAATA-TCAAACCTGA 2201
Query 2591 AGATGACAAACAAGAAAATTG-TCACAAGTTATCAGA-GAATAATAAGACTGCCTCTGAA 2648
|||||| || || |||||| ||| ||||||||||| | || || | ||||||| ||
Sbjct 2202 AGATGATGAA-AATAAAATTACTCAAAAGTTATCAGAAGGGGAAGAAAA-TGCCTCTAAA 2259
Query 2649 ATGCTTGTTTCAGGAACCAAGGTT-------A-GTTG-T-C--ATGAAGAGAACAACAG- 2695
|| |||| ||| || |||| || | ||| | | |||||||| | || ||
Sbjct 2260 ATTATTGTCTCAACAAGCAAGTTTGGTGGCCAAGTTTCTTCCGATGAAGAGCATAA-AGG 2318
Query 2696 AGTTATGAACTGTAATGGGCGTGGTAGTGTGGCTG-GAGAGAT---G-G-CT--A---AT 2744
|| |||||||||| | |||||| ||||||||||| ||| || | | || | ||
Sbjct 2319 AGCTATGAACTGTGACCGGCGTGATAGTGTGGCTGAGAGTGAAAACGAGGCTGGAGGGAT 2378
Query 2745 GGA-AAT-C-AA-G-G-T-GAAGATGGATCCTTCG-CA--TTTTCAGAACGGTTTCTGCA 2794
|| ||| | || | | | ||||||||||| || | || |||||||||||| ||||||
Sbjct 2379 GGTTAATTCTAACGAGGTTGAAGATGGATCTTTTGTCACATTTTCAGAACGGGATCTGCA 2438
Query 2795 AAC-TGTAAAACCTGTTGCCAAGCATCTGTCTTGGCCATTGCAAGCTAGTGAAACTTG-C 2852
| | |||||| || |||| |||||| || || || || ||||||| |||||| | | |
Sbjct 2439 A-CGTGTAAAGCCCCTTGCAAAGCATGTGCCTGGGACACTGCAAGCAAGTGAATGT-GAC 2496
Query 2853 TCCCAGAATGATTCTCAAGTTTTTTACGGGAATGATTCCTATTATGTGCTATTTAGGCTT 2912
|||| ||||||||||| |||||| || |||||||| || | |||| |||| |||||||||
Sbjct 2497 TCCCGGAATGATTCTCGAGTTTTCTATGGGAATGACTCATTTTATATGCTTTTTAGGCTT 2556
Query 2913 CATCAA 2918
||||||
Sbjct 2557 CATCAA 2562
Score = 374 bits (202), Expect = 4e-102
Identities = 375/456 (82%), Gaps = 22/456 (5%)
Strand=Plus/Plus
Query 459 TATCTCAAAGCTGTGAAGGATATTTTTCACGACAATAAAGAGAAATATGAGTCATTCC-T 517
||||||||||||||||||||||| ||||||||||||||||| ||||||||| | |||| |
Sbjct 166 TATCTCAAAGCTGTGAAGGATATGTTTCACGACAATAAAGAAAAATATGAGACTTTCCTT 225
Query 518 GGAGCTCATGAAGGAGTTCAAAGCTCAGACAATCGACACTAATGGTGTCATAGA-AAGGA 576
|||| |||||||||| ||||||||||||| | | ||||||||||| |||||| | ||| |
Sbjct 226 GGAG-TCATGAAGGACTTCAAAGCTCAGAGAGTTGACACTAATGGCGTCATA-ACAAGAA 283
Query 577 TTAAAG-TGTTGTTCAAGGGTTACAG-GGACCTACTTTTGGGTTTTAATACTTTCTTGCC 634
| |||| | ||||||||||| || | ||| ||||||||||||||||||| ||||||||
Sbjct 284 TCAAAGAT-TTGTTCAAGGGCTA-TGACGACTTACTTTTGGGTTTTAATACCTTCTTGCC 341
Query 635 CAAAGGGTATAAAATAACCCTTCTGCCAGAGGAAGAGAAGCCTAAG-ATCCGGGTGGATT 693
|| ||||| |||| ||||||| ||| ||||| ||||| |||||| | || |||||||
Sbjct 342 GAAGGGGTACCAAATTACCCTTCAGCCCGAGGATGAGAAACCTAAGAAGCC-AGTGGATT 400
Query 694 TCAAAG-ACGCTATCG-GTTTCGTCACCAAGATTAAGACGAGGTTTGGAGATGATGAACA 751
|| ||| | ||||||| ||| |||| ||||||||| || | ||||||| ||||||||
Sbjct 401 TCCAAGTA-GCTATCGAATTT-GTCAATAAGATTAAGGCGCGATTTGGAGGTGATGAACG 458
Query 752 TGCGTATAAACGGTTTCTAGACATCTTGAACTTGTATAGAAAGGAGAA-AAAGTCCATC- 809
||| |||||| || ||||||||||||||| ||||||||||| | || |||||||||
Sbjct 459 TGCATATAAAAAATTCCTAGACATCTTGAACATGTATAGAAAGCA-AACCAAGTCCATCA 517
Query 810 TCTGAGGTCTA-CGAAGAGGTTACTATGTTATTCAAGGGTCATGAAGATCTGCTTATG-G 867
| |||||||| | ||||||||||| |||| ||| ||| ||||||||||||| | | |
Sbjct 518 AC-GAGGTCTATC-AAGAGGTTACTCTGTTGTTCCAGGACCATGAAGATCTGC-TCGGAG 574
Query 868 AGTTCGTTAATTTCTTACCTAATTGTCCAGAATCAG 903
|||| || ||||||||||| ||| || || |||||
Sbjct 575 AGTTTTTTCATTTCTTACCTGATTTTCGAGGATCAG 610
Score = 204 bits (110), Expect = 5e-51
Identities = 185/221 (84%), Gaps = 6/221 (3%)
Strand=Plus/Plus
Query 1221 ATAAATGAGCTT-GATCTTTCTGAATGCACTCAGTGTACCCCAAGTTATCGACTCCTGCC 1279
|||||||| || |||||| ||| ||| | || ||||| ||||||||||| | ||||||
Sbjct 931 ATAAATGA-ATTGGATCTTGCTGGCTGCGCACAATGTACACCAAGTTATCGTCGCCTGCC 989
Query 1280 AAAGGATTAT-GCAGTTGAGATCCCAAGCTACAGAAATACACTTGGTAAAAAGACACTCA 1338
| | |||||| || || | || ||||||||||||||| |||||||| ||||| ||| |
Sbjct 990 AGATGATTATCCCA-TTCATATTCCAAGCTACAGAAATTCACTTGGTGAAAAGGTACTTA 1048
Query 1339 ATGACCACTT-GGTATCTGTCACTTCAGGGAGTGAAGATTACTCATTCAGTCATATGCGC 1397
|||| || || ||||||||| || || |||||||| ||||||||||||| || ||||||
Sbjct 1049 ATGATCA-TTGGGTATCTGTGACATCGGGGAGTGAGGATTACTCATTCAAACACATGCGC 1107
Query 1398 AAAAACCAGTATGAAGAAAGCTTGTTTCGGTGTGAGGATGA 1438
||||||||||||||||||||||||||||| |||||||||||
Sbjct 1108 AAAAACCAGTATGAAGAAAGCTTGTTTCGATGTGAGGATGA 1148
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 152116119281
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5