BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10670.3
Length=1724
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471195 jgi|Araly1|471195|fgenesh2_kg.1__1149__AT1G10670.1 2154 0.0
Ahg475250 jgi|Araly1|475250|fgenesh2_kg.2__380__AT1G60810.1 1517 0.0
Ahg919870 jgi|Araly1|919870|scaffold_101151.1 942 0.0
Ahg471036 jgi|Araly1|471036|fgenesh2_kg.1__990__AT1G09430.1 71.3 2e-11
> Ahg471195 jgi|Araly1|471195|fgenesh2_kg.1__1149__AT1G10670.1
Length=1662
Score = 2154 bits (1166), Expect = 0.0
Identities = 1306/1371 (95%), Gaps = 19/1371 (1%)
Strand=Plus/Plus
Query 368 GATTAATGAAACAACTGATCTAAATGAGCTAGTTGAAAAGGAACCTTGGCTCTCGTCTGA 427
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||
Sbjct 296 GATTAATGAAACAACTGATCTAAATGAGGTAGTTGAAAAGGAGCCTTGGCTCTCGTCCGA 355
Query 428 GAAGCTGGTGGTGAAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGC 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 356 GAAGCTGGTGGTGAAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGC 415
Query 488 CTTGAAATTAGATTTTGCTGATGTTGCCACTTTTGTTAAAGAACGTTTGGGAAAAGAGGT 547
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 416 CTTGAAATTAGATTTTGCTGATGTTGCCACTTTTGTGAAAGACCGTTTGGGCAAAGAGGT 475
Query 548 AGAGATGAGTGGATGCAAAGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACA 607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 476 AGAGATGAGTGGATGCAAAGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACA 535
Query 608 CAATGAGGAGTATTATCTCAATGTTGTCTCGGATCGGCTTGGTTGCAGCATAAGCTTTTC 667
|||||| |||| |||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 536 CAATGAAGAGTTTTATCTTAATGTTGTCTCGGATCGGCTTGGGTGCAGCATAAGCTTTTC 595
Query 668 TGAGTGTGGAGGAATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACAATATTTTTACC 727
||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 596 AGAGTGCGGAGGAATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACTATATTTTTACC 655
Query 728 AACAGGTGCTTCCCTGACACCTGAAATATGTGCACCTCTTGTCGCAACTCTTCCCTTAGA 787
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 656 AACAGGTGCTTCCCTGACACCTGAAATATGTGCACCTCTTGTGGCAACTCTTCCCTTAGA 715
Query 788 GATCAAAGCTGAAATTGAAGAATTTATCAAAGTCATTTTCACCCTATTCCAAGATCTTGA 847
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 716 GATCAAAGCTCAAATTGAAGAATTTATCAAAGTCATTTTCACCCTATTCCAAGATCTTGA 775
Query 848 TTTCACTTTCTTGGAGATGAATCCTTTCACTCTAGTTGATGGAAGTCCTTATCCTCTGGA 907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TTTCACTTTCTTGGAGATGAATCCTTTCACTCTAGTTGATGGAAGTCCTTATCCTCTGGA 835
Query 908 TATGAGGGGTGAGCTTGATGATACTGCTGCCTTCAAAAACTTTAAAAAATGGGGCGACAT 967
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 836 TATGAGGGGTGAGCTTGATGATACTGCCGCCTTCAAAAACTTTAAAAAATGGGGCGACAT 895
Query 968 TGAATTTCCTCTGCCATTTGGAAGAGTAATGAGT-CCTACAGAAAGCTTTATCCACGGAC 1026
|||||||||| ||||||||||||||||||||||| || ||||||||||||||||| ||||
Sbjct 896 TGAATTTCCTATGCCATTTGGAAGAGTAATGAGTGCC-ACAGAAAGCTTTATCCATGGAC 954
Query 1027 TGGATGAGAAGACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACCCCAAGGGACGGATTT 1086
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 955 TGGATGAGAAGACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACCCCAAGGGACGGATTT 1014
Query 1087 GGACAATGGTAGCTGGTGGAGGAGCAAGTGTCATCTATGCGGATACGGTTGGAGATCTCG 1146
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1015 GGACAATGGTAGCTGGTGGAGGAGCAAGTGTCATCTATGCGGATACTGTTGGAGATCTCG 1074
Query 1147 GGTATGCATCTGAACTTGGCAACTATGCTGAATACAGTGGAGCACCCAAAGAAGATGAGG 1206
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1075 GGTATGCATCTGAACTTGGCAACTATGCTGAATATAGTGGAGCACCCAAAGAAGATGAGG 1134
Query 1207 TTTTGCAGTACGCCAGAGTCGTTATTGATTGTGCTACAGCAAACCCGGATGGAAAAAGCA 1266
|||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct 1135 TTTTGCAGTACGCCAGAGTCGTTATTGACTGTGCTACAGCAAACCCTGATGGAAAAAGCA 1194
Query 1267 GAGCCCTTGTCATCGGAGGCGGAATTGCCAACTTCACTGACGTTGCTGCTACTTTCAATG 1326
|||| ||||| || || || |||||||||||||||||||| |||||||||||||||||||
Sbjct 1195 GAGCTCTTGTGATTGGGGGTGGAATTGCCAACTTCACTGATGTTGCTGCTACTTTCAATG 1254
Query 1327 GCATAATCCGCGCTCTTAAAGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATAT 1386
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1255 GCATAATCCGCGCTCTTAAAGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATTT 1314
Query 1387 TTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGCGAGCCCTTGGAG 1446
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1315 TTGTGAGGAGGGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGCGAGCCCTTGGAG 1374
Query 1447 ATGATATCGGTGTCCCCATCGAGGTCTATGGCCCAGAAGCAACCATGACAGGTATCTGCA 1506
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1375 ATGAAATCGGTGTCCCCATCGAGGTCTATGGTCCAGAAGCAACCATGACAGGTATCTGCA 1434
Query 1507 AGGAGGCAATCCAGTACATCACAGCAGCAGCATAAGCTTCTCTCAGTACCTT-----C-- 1559
||||||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1435 AGGAGGCCATCCAGTACATCACAGCAGCAGCATAAGCTTCTCTCAGTACCTTAAGATCCA 1494
Query 1560 T----ATGACCAAAACTTTGTCTGTGTTTTAGAGCCTTTATTTACTGTG-GTT-AAGATT 1613
| ||||| |||||| ||| |||||||||||||| ||| |||| || ||| ||||||
Sbjct 1495 TTTCTATGACAAAAACT--GTCGGTGTTTTAGAGCCTCTATCTACTTTGTGTTCAAGATT 1552
Query 1614 ACTCAAGCTATAAGATACTTGCAATTTCTTGAAAACTTCTGTTG-TTCGATTCTCTTTCC 1672
|||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||||
Sbjct 1553 ACTCAAGCTATAAGCTACTTGCAATTTCTTGAAAACTTCTGT-GATTCGATTCTCTTTCC 1611
Query 1673 CCTAACGTTTTCTTCAGATTCAATAAATAATCGTTACttttttttCCCCTC 1723
||||| ||| || ||||||||||||||||||||||| || |||| |||||
Sbjct 1612 CCTAAAGTTCTCCTCAGATTCAATAAATAATCGTTAAATTCTTTTGCCCTC 1662
Score = 353 bits (191), Expect = 2e-96
Identities = 221/234 (94%), Gaps = 7/234 (3%)
Strand=Plus/Plus
Query 81 TTTGGAAGTTGCAACTATAAATGGTAAATTCGGTCC-TTAAGATTAGAA-G---ACAA-A 134
|||| ||||||||||||||||||||||||||||||| |||||||||||| | | || |
Sbjct 64 TTTGTAAGTTGCAACTATAAATGGTAAATTCGGTCCTTTAAGATTAGAAGGCAAAGAAGA 123
Query 135 GAAGAGTCGTGTTGGTGAGCTAACTACCCAACCTGTGAAGCTACCCCCATTCTCTCTCAA 194
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 124 GAAGAGTCGTGTTGGTGAGCTAACTACCCAACCTGTGAAGCTA-CACCATTCTCTCTCAA 182
Query 195 CGTTTTCGTTTTGAAATGGCGAGGAAGAAGATCAGAGAGTATGACTCAAAGAGGTTGGTG 254
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 183 CGTTTTCGTTTTGAAATGGCGAGGAAGAAGATTAGAGAGTATGACTCAAAGAGATTGGTG 242
Query 255 AAGGAACATTTCAAAAGGCTTTCTGGCAAAGAGCTTCCTATCAGATCCGTTCAG 308
|||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 243 AAGGAACACTTCAAAAGGCTTTCTGGCAAAGAGCTTCCTATCAGATCCGTTCAG 296
> Ahg475250 jgi|Araly1|475250|fgenesh2_kg.2__380__AT1G60810.1
Length=1453
Score = 1517 bits (821), Expect = 0.0
Identities = 1053/1167 (90%), Gaps = 8/1167 (1%)
Strand=Plus/Plus
Query 381 ACTGATCTAAATGAGCTAGTTGAAAAGGAACCTTGGCTCTCGTCTGAGAAGCTGGTGGTG 440
|||||||| ||||||||||| || | ||| ||||||||||| ||||||||||| ||||||
Sbjct 158 ACTGATCTGAATGAGCTAGTAGAGAGGGAGCCTTGGCTCTCATCTGAGAAGCTTGTGGTG 217
Query 441 AAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGCCTTGAAATTAGAT 500
|||||||| |||||||| |||||||||||||| || ||||||||||||||||||||||||
Sbjct 218 AAACCTGATATGTTGTTCGGAAAGCGTGGCAAAAGCGGTTTGGTTGCCTTGAAATTAGAT 277
Query 501 TTTGCTGATGTTGCCACTTTTGTTAAAGAACGTTTGGGAAAAGAGGTAGAGATGAGTGGA 560
|||||||||||||| ||||| || |||||||| || || |||||||||||||||||||||
Sbjct 278 TTTGCTGATGTTGCTACTTTCGTGAAAGAACGGTTAGGCAAAGAGGTAGAGATGAGTGGA 337
Query 561 TGCAAAGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACACAATGAGGAGTAT 620
|||||||||||||||||||| || || |||||||||||||| |||||||||||||||| |
Sbjct 338 TGCAAAGGACCCATAACAACGTTTATTGTTGAACCATTTGTCCCACACAATGAGGAGTTT 397
Query 621 TATCTCAATGTTGTCTCGGATCGGCTTGGTTGCAGCATAAGCTTTTCTGAGTGTGGAGGA 680
||||| ||| ||||||| ||| | ||||| |||||||| |||||||| |||||||||||
Sbjct 398 TATCTTAATATTGTCTCTGATAGACTTGGCTGCAGCATTAGCTTTTCGGAGTGTGGAGGT 457
Query 681 ATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACAATATTTTTACCAACAGGTGCTTCC 740
|| || ||||||||||||||||||||||||||||| |||| | |||| || |||||||||
Sbjct 458 ATCGACATCGAGGAGAACTGGGACAAGGTCAAGACCATATCTATACCGACGGGTGCTTCC 517
Query 741 CTGACACCTGAAATATGTGCACCTCTTGTCGCAACTCTTCCCT-TAGAGATCAAAGCTGA 799
||||||||||| |||||||||||||||| ||||| ||| ||| |||||||||||| ||
Sbjct 518 CTGACACCTGAGCTATGTGCACCTCTTGTTGCAACACTT-CCTCTAGAGATCAAAGGGGA 576
Query 800 AATTGAAGAATTTA-TCAAAGTCATTTTCACCCTATTCCAAGATCTTGATTTCACTTTCT 858
| ||||||| |||| || |||| ||||| ||| ||||| |||||||||||||||||||||
Sbjct 577 ACTTGAAGATTTTATTC-AAGTTATTTTTACCTTATTCGAAGATCTTGATTTCACTTTCT 635
Query 859 TGGAGATGAATCCTTTCAC-TCTAGTTGATGG-AAGTCCTTATCCTCTGGATATGAGGGG 916
||||||||||||||||||| | | |||||||| ||| ||||||||||| |||||||||||
Sbjct 636 TGGAGATGAATCCTTTCACAT-TGGTTGATGGAAAG-CCTTATCCTCTAGATATGAGGGG 693
Query 917 TGAGCTTGATGATACTGCTGCCTTCAAAAACTTTAAAAAATGGGGCGACATTGAATTTCC 976
|||||||||||| || ||||| |||||||||||||| || ||||| ||||||||||| ||
Sbjct 694 TGAGCTTGATGACACCGCTGCTTTCAAAAACTTTAAGAAGTGGGGTGACATTGAATTCCC 753
Query 977 TCTGCCATTTGGAAGAGTAATGAGTCCTACAGAAAGCTTTATCCACGGACTGGATGAGAA 1036
| ||||||||||||||||||||||| | ||||||||||| |||||||| || ||||||||
Sbjct 754 TATGCCATTTGGAAGAGTAATGAGTTCAACAGAAAGCTTCATCCACGGTCTAGATGAGAA 813
Query 1037 GACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACCCCAAGGGACGGATTTGGACAATGGT 1096
||||||||||||||||||||| || |||||||| ||||||||| |||||||||| |||||
Sbjct 814 GACAAGTGCGTCTTTGAAGTTCACTGTTCTGAATCCCAAGGGAAGGATTTGGACTATGGT 873
Query 1097 AGCTGGTGGAGGAGCAAGTGTCATCTATGCGGATACGGTTGGAGATCTCGGGTATGCATC 1156
|||||| ||||| ||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct 874 AGCTGGAGGAGGTGCAAGTGTCATCTATGCCGATACCGTTGGAGATCTCGGGTATGCATC 933
Query 1157 TGAACTTGGCAACTATGCTGAATACAGTGGAGCACCCAAAGAAGATGAGGTTTTGCAGTA 1216
||| ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 934 TGAGCTTGGAAATTATGCTGAATACAGTGGAGCACCCAAAGAAGACGAGGTTTTGCAGTA 993
Query 1217 CGCCAGAGTCGTTATTGATTGTGCTACAGCAAACCCGGATGGAAAAAGCAGAGCCCTTGT 1276
||| |||||||| || |||||||||||||| || |||||||||||||| ||||| || ||
Sbjct 994 CGCGAGAGTCGTCATCGATTGTGCTACAGCGAATCCGGATGGAAAAAGTAGAGCTCTGGT 1053
Query 1277 CATCGGAGGCGGAATTGCCAACTTCACTGACGTTGCTGCTACTTTCAATGGCATAATCCG 1336
|||||||| |||||||| |||||||| || ||||||||||| |||||||||||||||||
Sbjct 1054 AATCGGAGGAGGAATTGCTAACTTCACCGATGTTGCTGCTACCTTCAATGGCATAATCCG 1113
Query 1337 CGCTCTTAAAGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATATTTGTGAGGAG 1396
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 AGCTCTCAAGGAAAAGGAAGCAAAGCTGAAAGCAGCAAGGATGCATATATTTGTGAGGAG 1173
Query 1397 AGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGCGAGCCCTTGGAGATGATATCGG 1456
||||||||||||||||||||||||||||||||||||| || | ||||||||||| |||||
Sbjct 1174 AGGAGGACCAAACTACCAAAAGGGACTTGCTAAAATGAGATCACTTGGAGATGAAATCGG 1233
Query 1457 TGTCCCCATCGAGGTCTATGGCCCAGAAGCAACCATGACAGGTATCTGCAAGGAGGCAAT 1516
||||||||||||||| ||||| || |||||||| ||||||||||||||||||||||||||
Sbjct 1234 TGTCCCCATCGAGGTGTATGGTCCTGAAGCAACAATGACAGGTATCTGCAAGGAGGCAAT 1293
Query 1517 CCAGTACATCACAGCAGCAGCATAAGC 1543
|||||||||||| || || ||||||||
Sbjct 1294 CCAGTACATCACCGCGGCTGCATAAGC 1320
Score = 117 bits (63), Expect = 3e-25
Identities = 83/92 (90%), Gaps = 4/92 (4%)
Strand=Plus/Plus
Query 219 AAGAAGATCAGAGAGTATGACTCAAAGAGGTTGGTGAAGGAACATTTCAAAAGGCTTTCT 278
||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||
Sbjct 56 AAGAAGATCAGAGAGTATGACTCAAAGAGACTGGTGAAAGAACACTTCAAAAGGCTTTCT 115
Query 279 GG-CAAAGAGCTT-CCTATCAGATCCGTTCAG 308
|| ||| || || ||||||||||||||||||
Sbjct 116 GGTCAA-GAA-TTGCCTATCAGATCCGTTCAG 145
> Ahg919870 jgi|Araly1|919870|scaffold_101151.1
Length=1228
Score = 942 bits (510), Expect = 0.0
Identities = 539/553 (97%), Gaps = 2/553 (0%)
Strand=Plus/Plus
Query 368 GATTAATGAAACAACTGATCTAAATGAGCTAGTTGAAAAGGAACCTTGGCTCTCGTCTGA 427
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 80 GATTAATGAAACAACTGATCTAAATGAGCTAGTTGAAAAGGAGCCTTGGCTCTCGTCCGA 139
Query 428 GAAGCTGGTGGTGAAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGC 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 140 GAAGCTGGTGGTGAAACCTGACATGTTGTTTGGAAAGCGTGGCAAGAGTGGTTTGGTTGC 199
Query 488 CTTGAAATTAGATTTTGCTGATGTTGCCACTTTTGTTAAAGAACGTTTGGGAAAAGAGGT 547
|||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||
Sbjct 200 CTTGAAATTAGATTTTGCTGATGTTGCCACTTTTGTGAAAGACCGTTTGGGCAAAGAGGT 259
Query 548 AGAGATGAGTGGATGCAAAGGACCCATAACAACATTCATAGTTGAACCATTTGTTCCACA 607
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 260 AGAGATGAGTGGATGCAAAGGACCCATAACAACATTCATAGTTGAGCCATTTGTTCCACA 319
Query 608 CAATGAGGAGTATTATCTCAATGTTGTCTCGGATCGGC-TTGGTTGCAGCATAAGCTTTT 666
||||||||||| |||||| ||||||||||||||||||| || | ||||||||||||||||
Sbjct 320 CAATGAGGAGTTTTATCTTAATGTTGTCTCGGATCGGCTTTTG-TGCAGCATAAGCTTTT 378
Query 667 CTGAGTGTGGAGGAATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACAATATTTTTAC 726
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 379 CAGAGTGTGGAGGAATTGAGATCGAGGAGAACTGGGACAAGGTCAAGACAATATTTTTAC 438
Query 727 CAACAGGTGCTTCCCTGACACCTGAAATATGTGCACCTCTTGTCGCAACTCTTCCCTTAG 786
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 439 CAACAGGTGCTTCCCTGACACCTGAAATATGTGCACCTCTAGTGGCAACTCTTCCCTTAG 498
Query 787 AGATCAAAGCTGAAATTGAAGAATTTATCAAAGTCATTTTCACCCTATTCCAAGATCTTG 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 499 AGATCAAAGCTGAAATTGAAGAATTTATCAAAGTCATTTTCACCCTATTCCAAGATCTTG 558
Query 847 ATTTCACTTTCTTGGAGATGAATCCTTTCACTCTAGTTGATGGAAGTCCTTATCCTCTGG 906
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 559 ATTTCACTTTCTTGGAGATGAATCCTTTCACTCTAGTTGATGGAAGTCCTTATCCTCTGG 618
Query 907 ATATGAGGGGTGA 919
|||||||||||||
Sbjct 619 ATATGAGGGGTGA 631
Score = 857 bits (464), Expect = 0.0
Identities = 566/611 (93%), Gaps = 23/611 (4%)
Strand=Plus/Plus
Query 955 AATGGGGCGACATTGAATTTCCTCTGCCATTTGGAAGAGTAATGAGTCCTACAGAAAGCT 1014
|||||||||||||| |||||||| ||||||||||||||||||||||||| ||| ||||||
Sbjct 631 AATGGGGCGACATTAAATTTCCTATGCCATTTGGAAGAGTAATGAGTCCGACAAAAAGCT 690
Query 1015 TTATCCACGGACTGGATGAG-A-A-GACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACC 1071
|||||||| |||| |||||| | | |||||||||||||||||||||||||||||||||||
Sbjct 691 TTATCCACAGACTAGATGAGAAGACGACAAGTGCGTCTTTGAAGTTTACCGTTCTGAACC 750
Query 1072 CCAAGGGACGGATTTGGACAATGGTAGCTGGTGGAGGAGCAAGTGTCATCTATGCGGATA 1131
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 751 CCAAGGGACGGATTTGGACAATGGTAGCTGGTGGAGGAGCAAGGGTCATCTATGCGGATA 810
Query 1132 CGGTTGGAGATCTCGGGTATGCATCTGAACTTGGCAACTATGCTGAATACAGTGGAGCAC 1191
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 811 CCGTTGGAGATCTCGGGTATGCATCTGAACTTGGCAACTATGCTGAATACAGTGGCGCAC 870
Query 1192 CCAAAGAAGATGAGGTTTTGCAGTACGCCAGAGTCGTTATTGATTGTGCTACAGCAAACC 1251
|||||||||||||||||||||||||| | ||||| ||||| |||||||||||||||||||
Sbjct 871 CCAAAGAAGATGAGGTTTTGCAGTACACAAGAGTAGTTATAGATTGTGCTACAGCAAACC 930
Query 1252 CGGATGGAAAAAGCAGAGCCCTTGTCATCGGAGGCGGAATTGCCAACTTCACTGACGTTG 1311
||||||||||||||||||| ||||| || || || |||||||||||||||||||| ||||
Sbjct 931 CGGATGGAAAAAGCAGAGCTCTTGTGATTGGGGGTGGAATTGCCAACTTCACTGATGTTG 990
Query 1312 CTGC-T---ACTTTCAATGGCATAATCCGCGCTCTTAAAGAAAAGGAAGCAAAGCTGAAA 1367
|||| | |||||||||||||||||||||| || | |||||||||||
Sbjct 991 CTGCCTGCTACTTTCAATGGCATAATCCGCG-----AA-G---------CAAAGCTGAAA 1035
Query 1368 GCAGCAAGGATGCATATATTTGTGAGGAGAGGAGGACCAAACTACCAAAAGGGACTTGCT 1427
|||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||
Sbjct 1036 GCAGCAAGGATGCATATATTTGTGAGAAGAGGAGGACCAAACTACCAAA-GGGACTTGCT 1094
Query 1428 AAAATGCGAGCCCTTGGAGATGATATCGGTGTCCCCATCGAGGTCTATGGCCCAGAAGCA 1487
||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 1095 AAAATGCGAGCCCTTGGAGATGAAATCGGTGTCCCCATCGAGGTCTATGGTCCAGAAGCA 1154
Query 1488 ACCATGACAGGTATCTGCAAGGAGGCAATCCAGTACATCACAGCAGCAGCATAAGCTTCT 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1155 ACCATGACAGGTATCTGCAAGGAGGCAATCCAGTACATCACAGCAGCAGCATAAGCTTCT 1214
Query 1548 CTCAGTACCTT 1558
|||||||||||
Sbjct 1215 CTCAGTACCTT 1225
> Ahg471036 jgi|Araly1|471036|fgenesh2_kg.1__990__AT1G09430.1
Length=1711
Score = 71.3 bits (38), Expect = 2e-11
Identities = 51/57 (89%), Gaps = 2/57 (4%)
Strand=Plus/Plus
Query 210 ATGGCGAGGAAGAAGATCAGAGAGTATGACTCAAAGAGG-TTGGTGAAGGAACATTT 265
|||||||||||||||||||||||||||||||| ||||| || | |||||||||||
Sbjct 110 ATGGCGAGGAAGAAGATCAGAGAGTATGACTCCAAGAGACTTC-TCAAGGAACATTT 165
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 64677236010
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5