BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10900.1
Length=2644
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471229 jgi|Araly1|471229|fgenesh2_kg.1__1183__AT1G10900.1 3714 0.0
Ahg475243 jgi|Araly1|475243|fgenesh2_kg.2__373__AT1G60890.1 1373 0.0
> Ahg471229 jgi|Araly1|471229|fgenesh2_kg.1__1183__AT1G10900.1
Length=2365
Score = 3714 bits (2011), Expect = 0.0
Identities = 2219/2316 (96%), Gaps = 28/2316 (1%)
Strand=Plus/Plus
Query 218 ATGGATATGAGGTCTGGAGATAGAGAATTCCCAAATGGTGATTTCTATTCTGGGGAAGTG 277
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1 ATGGATATGAGGTCTGGAGATAGAGAATTCCCAAATGGTGATTTCTATTCTGGTGAAGTT 60
Query 278 AAAGGAATAATTCCTAATGGGAAGGGAAAGTATGCATGGTCAGATGGAACTATCTACGAG 337
|||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 61 AAAGGATTACTTCCTAATGGGAAGGGAAAGTATGCGTGGTCAGATGGAACTATCTACGAA 120
Query 338 GGTGATTGGGATGAAGGCAAAATCTCTGGTAAAGGGAAGCTTATTTGGTCATCTGGAGCT 397
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 GGTGATTGGGATCAAGGCAAAATCTCTGGTAAAGGGAAGCTTATTTGGTCATCTGGAGCT 180
Query 398 AAATATGAGGGAGATTTCTCTGGTGGATACCTTCATGGTTTTGGCACCATGACCTCACCT 457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 AAATATGAGGGAGATTTCTCTGGTGGATACCTTCATGGTTTTGGCACCATGACCTCACCT 240
Query 458 GATGAGTCTGTCTACAGCGGAGCCTGGAGAATGAATGTGAGGCATGGGCTTGGCAGGAAA 517
||||| |||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 GATGAATCTGTCTATAGTGGAGCCTGGAGAATGAATGTGAGGCATGGGCTTGGCAGGAAA 300
Query 518 GAGTATTGTAACTCAGATCTATATGACGGTTTGTGGAAAGAAGGATTACAAGACGGGCGT 577
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 301 GAGTATTCTAACTCAGATCTATATGACGGTTTGTGGAAAGAAGGATTACAAGACGGGCGT 360
Query 578 GGTAGTTATTCTTGGACCAATGGAAATAGGTACATAGGGAACTGGAAAAAGGGTAAGATG 637
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 361 GGTAGTTATTCTTGGACCAATGGAAATAGGTACATAGGGAATTGGAAAAAGGGTAAGATG 420
Query 638 TGTGAGAGAGGAGTTATGAGATGGGAAAACGGTGATCTTTATGACGGTTTTTGGTTGAAT 697
||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||
Sbjct 421 TGTGAGAGAGGAGTTATGAGATGGGCCAATGGTGATCTTTATGACGGTTTTTGGTTGAAT 480
Query 698 GGCTTTAGACATGGCTCTGGAGTTTATAAGTTTGCTGATGGATGTTTATATTATGGTACC 757
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 481 GGCTTTAGACATGGCTCTGGAGTTTATAAGTTTGCTGATGGATGTTTATATTATGGGACC 540
Query 758 TGGTCCCGAGGCCTAAAAGACGGGAAGGGAGTCTTTTATCCTGCTGGAACTAAACAACCA 817
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 541 TGGTCCAGAGGCCTAAAAGACGGGAAGGGAGTCTTTTATCCTGCTGGAAGTAAACAACCA 600
Query 818 TCTCTAAAGAAGTGGTGTCGCTCTCTTGAATATGATGACACTGGAAAGTTTGTACTTTCT 877
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TCTCTAAAGAAGTGGTCTCGCTCTCTTGAATATGATGACACTGGAAAGTTTGTACTTTCT 660
Query 878 CGCAGTGCATCGGTAAATGTTGAGGAGCTAAGGAGTTTAAACACTGTGACACAAAGTCTT 937
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 CGTAGTGCATCAGTAAATGTTGAGGAGCTAAGGAGTTTAAACACTGTGACACAAAGTCTT 720
Query 938 TCTGTGAAAACTTCAGC--------T---GG-TGAAA--C----CACCTGTGATCCTCCA 979
||||||||||||||||| | || ||||| | |||||||||||||||
Sbjct 721 TCTGTGAAAACTTCAGCTGATAGGTTGCCGGATGAAATTCGGAGGACCTGTGATCCTCCA 780
Query 980 AGAGACTTTACATGTCATGGGCCAG-TATCTAAGTCTGCACGGTTTTCTGGCTCAGGCCA 1038
||||||||||||||||||||||| | ||||||||||||||||||||| |||||||||||
Sbjct 781 AGAGACTTTACATGTCATGGGCC-GTTATCTAAGTCTGCACGGTTTTTTGGCTCAGGCCT 839
Query 1039 AAGCGAGGGACAAGATAAG-AACCGTATTGTTTATGAAAGGGAATACATGCAAGGAGTTT 1097
||||| |||||||||| || |||||||||||||| |||||||||||||||||||||||||
Sbjct 840 AAGCGTGGGACAAGAT-AGAAACCGTATTGTTTACGAAAGGGAATACATGCAAGGAGTTT 898
Query 1098 TGATTAGAGAAACTATTATGAGTTCCGTTGACAGGTCACACAAAATTAAACCTCCAAATC 1157
|||||||||||||||| ||||| || |||||||||||||||||||||||||||||| |||
Sbjct 899 TGATTAGAGAAACTATCATGAGCTCTGTTGACAGGTCACACAAAATTAAACCTCCACATC 958
Query 1158 GTCC-AAGAGAAGTCAGGGCTAGGTCTTTAATGACCTTTCTTAGGGGGGAACACAATTAT 1216
|||| || |||||||||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct 959 GTCCTAA-AGAAGTCAGGGCCAGGTCTTTACTGACCTTTCTTATGGGGGAACACAATTAT 1017
Query 1217 TACT-TAATGCTAAATCTCCAACTTGGTATCAGGTATACTGTAGGAAAAATTACACCAGT 1275
|| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1018 TA-TCTAATGCTAAATCTCCAACTTGGTATCAGGTATACTGTTGGAAAAATTACACCAGT 1076
Query 1276 GCCGAGGCGAGAAGTGCGTGCTTCTGACTTTGGTAAGAACGCTAGAACAAAGATGTTCTT 1335
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GCCTAGGCGAGAAGTGCGTGCTTCTGACTTTGGTAAGAACGCTAGAACAAAGATGTTCTT 1136
Query 1336 CCCTAGAGACGGCTCCAATTTTACCCCTCCACACAAATCTGTCGACTTCTCCTGGAAAGA 1395
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1137 CCCTAGAGACGGCTCCAATTTTACGCCTCCACACAAATCTGTCGACTTCTCCTGGAAAGA 1196
Query 1396 CTATTGTCCCATGGTTTTCAGGAATTTAAGGCAGATGTTCAAGTTAGATGCTGCAGAGTA 1455
||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1197 CTATTGTCCTATGGTTTTCAGGAATTTACGGCAGATGTTCAAGTTAGATGCTGCAGAGTA 1256
Query 1456 CATGATGTCTATTTGTGGTGATGATGGCCTGACAGAAATTTCTTCCCCCGGGAAAAGTGG 1515
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1257 TATGATGTCTATTTGTGGTGATGATGGCCTGACAGAAATTTCTTCTCCCGGGAAAAGTGG 1316
Query 1516 CAGTATCTTCTACCTTTCTCATGACGACAGATTTGTGATCAAGACTTTAAAAAAGTCTGA 1575
||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||
Sbjct 1317 CAGTATCTTCTACCTTTCTCATGACGACAGATTTGTGATCAAGACATTAAAAAAATCTGA 1376
Query 1576 GTTGCAGGTTCTACTCAGAATGTTGCCTAAGTACTATGAACATGTAGGCGACCATGAAAA 1635
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1377 GTTGCAGGTTCTACTCAGAATGTTGCCTAAGTACTATGAACATGTAGGGGACCATGAAAA 1436
Query 1636 CACACTTATAACCAAATTTTTTGGAGTTCACAGAATAACCCTCAAGTGGGGTAAAAAGGT 1695
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1437 CACACTTATAACCAAATTTTTTGGAGTTCACAGAATAACACTCAAGTGGGGTAAAAAGGT 1496
Query 1696 ACGCTTTGTAGTCATGGGGAATATGTTTTGCACAGAATTGAAGATTCATCGTCGTTATGA 1755
||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1497 ACGCTTTGTGGTCATGGGGAATATGTTTTGCACAGAATTGAAGATCCATCGTCGTTATGA 1556
Query 1756 TCTAAAGGGTTCAACTCAAGGGAGATTTACTGAAAAGATCAAAATCCAAGAGAAGACCAC 1815
||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1557 TCTAAAGGGTTCATCTCAAGGGAGATTTACTGAAAAGATTAAAATCCAAGAGAAGACCAC 1616
Query 1816 ATTGAAAGATCTTGATCTAGCTTATGAATTTCATATGGACAAGCTGTTACGGGAAGCCCT 1875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 ATTGAAAGATCTTGATCTAGCTTATGAATTTCATATGGACAAGCTGTTACGGGAAGCCCT 1676
Query 1876 TTTCAAGCAAATTTACTTAGACTGCTCGTTTTTGGAATCGCTGAACATCATTGACTACAG 1935
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1677 CTTCAAGCAAATTTACTTAGACTGCTCGTTCTTGGAATCGCTGAACATCATTGACTACAG 1736
Query 1936 TCTTTTACTGGGATTACATTTTAGAGCTCCTGGCCAACTTAATGATATCCTTGAGCCTCC 1995
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1737 TCTTTTACTGGGATTACATTTTAGAGCTCCTGGCCAACTTAATGATATCCTAGAGCCTCC 1796
Query 1996 AAATGCAATGTCAGATCAAGAAAGCGTTTCTTCAGTAGATGTCGGTTTGACTCAGGAACA 2055
||||||||||||||||||||||||||||||||| ||||| ||||||||| |||||||||
Sbjct 1797 AAATGCAATGTCAGATCAAGAAAGCGTTTCTTCTGTAGACGTCGGTTTGGCTCAGGAACT 1856
Query 2056 CTCCATTCCTCCAAAAGGATTGCTTTTGGTAACTCATGAACCCAATTCCGTGAATACTGC 2115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1857 CTCCATTCCTCCAAAAGGATTGCTTTTGGTAACTCATGAACCCAATTCCGTGAATACTGC 1916
Query 2116 ACCGGGTCCTCACATCAGAGGGAGCACACTCAGAGCATTTTCCGTTGGCGAGCAGGAAGT 2175
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1917 ACCGGGTCCTCACATCAGAGGAAGCACACTCAGAGCATTTTCTGTTGGCGAGCAGGAAGT 1976
Query 2176 TGATCTTATTCTTCCTGGAACTGCAAGGCTGCGGGTACAATTAGGAGTGAACATGCCGGC 2235
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 TGATCTTATTCTTCCCGGAACTGCAAGGCTGCGGGTACAATTAGGAGTGAACATGCCGGC 2036
Query 2236 ACAAGCTCATCACAAGCTTATTGAGGACAAGGAAGAGTCAGCGACAATTGAGCTTTTTGA 2295
|||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 2037 CCAAGCTCATCACAAGCTTATTGAGGACAAGGAAGAGTCGGCGACAATTGAGCTCTTTGA 2096
Query 2296 AGTATACGATGTGGTTGTGTACATGGGAATCATAGATATTTTGCAGGAGTATAACACCAA 2355
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2097 AGTATACGATGTGGTTGTGTACATGGGAATCATAGATATCTTGCAGGAGTATAACACCAA 2156
Query 2356 GAAGAAAGTGGAACATACTTGCAAATCTTTGCAGTATGATCCGATGACAATATCTGTGAC 2415
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2157 GAAGAAAGTGGAACATACTTGCAAGTCTTTGCAGTATGATCCGATGACAATATCTGTGAC 2216
Query 2416 CGAACCTTCTACTTACTCAAAACGCTTTGTCAATTTTCTACACAAGGTGTTCCCAGAAGA 2475
||||||||| | |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2217 CGAACCTTCCATTTACTCAAAACGCTTTGTCAATTTTCTACACAAGGTATTCCCAGAAGA 2276
Query 2476 AAGGTAGGATCAACAATTTTC-TTCTCAATGCCTTT 2510
|||||||||| || ||||||| || ||||||| |||
Sbjct 2277 AAGGTAGGATTAAGAATTTTCATT-TCAATGCTTTT 2311
> Ahg475243 jgi|Araly1|475243|fgenesh2_kg.2__373__AT1G60890.1
Length=2921
Score = 1373 bits (743), Expect = 0.0
Identities = 1291/1549 (83%), Gaps = 63/1549 (4%)
Strand=Plus/Plus
Query 964 CACCTGTGATCCTCCAAGAGACTTTACATG--TCATGGGCCAGTATCTAAGTCTGCACGG 1021
|||| |||| ||||||||||||||| | || ||||||||| | ||| ||||||||||||
Sbjct 1216 CACCAGTGACCCTCCAAGAGACTTT-C-TGCATCATGGGCCCGCATCCAAGTCTGCACGG 1273
Query 1022 T-TTTCTGGCTCAGGCCAAAGCGAGGGACAAGATAAGAACCGTATTGTTTATGAAAGGGA 1080
| | | || ||| || ||||||||| || |||||||||| ||| |||| |||||||||
Sbjct 1274 TCTGT-TGACTCTGGTCAAAGCGAGATACGGGATAAGAACCCTATCGTTTTTGAAAGGGA 1332
Query 1081 ATACATGCAAGGAGTTTTGATTAGAGAAAC-TATTATGAGTTCCGTTGACAGGTCACACA 1139
||||||||||||||||||||||| || ||| ||||||||||| | |||| ||||||||
Sbjct 1333 ATACATGCAAGGAGTTTTGATTAAAG-AACGAATTATGAGTTCTATCGACATGTCACACA 1391
Query 1140 AAATTAAACCTCCAAATCGT-CCAAGAGAAGTCAGGGCTAG-GTCTT-TAATGACCTTTC 1196
|| |||| |||| | | || |||||||| | ||| | ||| | ||| |||||
Sbjct 1392 GGGCTAGACCTTTGAATCTTACTAA-AGAAGTCACAGTTAGCG-CTTGT-GTGAGCTTTC 1448
Query 1197 TTAGGGGGG-AACACAATTATTACT-TAATGCTAAATCTCCAACTTGGTATCAGGTATAC 1254
|||||||| || || |||| | ||||||| ||||||||||| ||||||||||||||
Sbjct 1449 -TAGGGGGGAAATGGAACCATTA-TCTAATGCTTAATCTCCAACTCGGTATCAGGTATAC 1506
Query 1255 TGTAGGAAAAATTACACCAGTGCCGAGGCGAGAAGTGCGTGCTTCTGACTTT-G-GTAAG 1312
||| || ||||| ||||||||||| || ||||| ||||||||||||||| | | |||
Sbjct 1507 TGTTGGGAAAATCACACCAGTGCCTCCACGGGAAGTTCGTGCTTCTGACTTTAGTGAAAG 1566
Query 1313 AACGCTAGAA-CAAAGATGTTCTTCCCTAGAGACGGCTCCAATTTTACCCCTCCACACAA 1371
| || |||| | | |||||||||||||||| |||| ||| | | ||| |||||||||||
Sbjct 1567 -A-GCCAGAATC-ATGATGTTCTTCCCTAGAAACGGTTCCCAGTATACACCTCCACACAA 1623
Query 1372 ATCTGTCGACTTCT-CCTGGAAAGACTATTGTCCCATGGTTTTCAGGAATTTAAGGCAGA 1430
|| | || || | ||||||||||||||||| ||||||||||||||||||||| |||
Sbjct 1624 GTCCATTGA-TTTTGATTGGAAAGACTATTGTCCTATGGTTTTCAGGAATTTAAGGGAGA 1682
Query 1431 TGTTCAAGTTAGATGCTGCAGAGTACATGATGTCTATTTGTGGTGATGATGGCCTGACAG 1490
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| |
Sbjct 1683 TGTTCAAGTTAGATGCTGCAGACTACATGATGTCTATTTGTGGCGATGATGGCCTGAGGG 1742
Query 1491 AAATTTCTTCCCCCGGGAAAAGTGGCAGTATCTTCTACCTTTCTCATGACGACAGATTTG 1550
||||||| ||||| ||||||||||||||||||||||||||||| || |||||||||||||
Sbjct 1743 AAATTTCGTCCCCTGGGAAAAGTGGCAGTATCTTCTACCTTTCCCACGACGACAGATTTG 1802
Query 1551 TGATCAAGACTTTAAAAAAG-TCTGAGTTGCAGGTTCTACTCAGAATGTTGCCTAAGTAC 1609
|||| ||||| || |||||| ||||||||| ||||||||||||| |||||||| | ||||
Sbjct 1803 TGATAAAGACATT-AAAAAGATCTGAGTTGAAGGTTCTACTCAGGATGTTGCCCAGGTAC 1861
Query 1610 TATGAACATGTAGGCGACCATGAAAACACACTTATAACCAAATTTTTTGGAGTTCACAGA 1669
|||||||||||||| || ||||||| || || ||||| |||||||||||||||||||||
Sbjct 1862 TATGAACATGTAGGAAACTATGAAAATACGCTCATAACGAAATTTTTTGGAGTTCACAGA 1921
Query 1670 ATAACCCTCAAGTGGGGTAAAAAGGTACGCTTTGTAGTCATGGGGAATATGTTTTGCACA 1729
|||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 1922 ATAAAACTCAAGTGGGGTAAAAAGGTACGCTTTGTGGTCATGGGGAATATGTTTTGCACA 1981
Query 1730 GAATTGAAGATTCATCGTCGTTATGATCTAAAGGGTTCAACTCAAGGGAGATTTACTGAA 1789
||||||||||||||||| || ||||| |||||||| |||||||||||||||| ||| |||
Sbjct 1982 GAATTGAAGATTCATCGCCGCTATGACCTAAAGGGCTCAACTCAAGGGAGATATACAGAA 2041
Query 1790 AAGA-TCAAAATCCAAGAGAAGACCAC-ATTGAAAGATCTTGATCTAGCTTATGAATTTC 1847
|||| | ||||| ||| ||||| || || ||||||||||||||| |||||||||||||
Sbjct 2042 AAGAAT-AAAATTGGAGAAAAGACTACCAT-GAAAGATCTTGATCTTGCTTATGAATTTC 2099
Query 1848 ATATGGACAAGCTGTTACGGGAAGCCCTTTTCAAGCAAATTTACTT-AGACTGCT-CGTT 1905
|||||||||||||| | || || || || |||||||||||| | || ||||| || ||||
Sbjct 2100 ATATGGACAAGCTGCTGCGAGAGGCTCTCTTCAAGCAAATT-ATTTTAGACT-CTTCGTT 2157
Query 1906 TTTGGAATCGCTG-AACATCATTGACTACAGTCTTTTACTGGGATTACATTTTAGAGCTC 1964
|||||||| ||| || ||| |||| ||||||||| | |||||||||||||||||||||
Sbjct 2158 CTTGGAATCTCTGCAA-ATCCTTGATTACAGTCTTCTGTTGGGATTACATTTTAGAGCTC 2216
Query 1965 CTGG-CCAACTTAATGATATCCTTGAGCCTCCAAATGCAATGTCAGATCAAGAAAGCG-T 2022
||| ||| |||| ||||||||| |||||||| |||| |||||||||||||||||| | |
Sbjct 2217 CTGATCCA-CTTACTGATATCCTGGAGCCTCCCAATGAAATGTCAGATCAAGAAAGTGAT 2275
Query 2023 --T-T--CTTCAGTAGATGTCGGTTTGACTCAG-GAACACTCCATTCCTCCAAAAGGATT 2076
| | |||| || || ||| ||||| ||| | |||| | ||||||||||||||||
Sbjct 2276 AGTGTTGCTTCTGTTGACGTCAGTTTGCCTC-GTGAACCCGCCATTCCTCCAAAAGG--- 2331
Query 2077 GCT-TT--TGGTAACTCATGAACCCAATTCCGTGAATACTGCACCGGGTCCTCACATCAG 2133
||| || |||| || || |||||||||||||| ||||| || || ||||||||||||||
Sbjct 2332 GCTATTAATGGTTACCCACGAACCCAATTCCGTTAATACCGCCCCAGGTCCTCACATCAG 2391
Query 2134 AGGGAGCACACT-CAGAGCATTTTCCGTTGGCGAGCAGGAAGTTGATCTTATTCTTCCTG 2192
||| |||||||| | |||| || || ||||||||||| ||||||||||||||||| ||||
Sbjct 2392 AGGTAGCACACTGC-GAGCCTTCTCTGTTGGCGAGCAAGAAGTTGATCTTATTCTACCTG 2450
Query 2193 GAACTGCAAGGCTGCGGGTACAATTAGGAGTGAACATGCCGGCACAAGCTCATCACAAGC 2252
||||||||||||| |||||||| ||||||||||||||||| || ||||| || ||||| |
Sbjct 2451 GAACTGCAAGGCTCCGGGTACAGTTAGGAGTGAACATGCCAGCTCAAGCCCACCACAAAC 2510
Query 2253 TTATTGAGGACAAGGAAGAGTCAGCGACAAT-T-GAGCTTTTTGAAGTATACGATGTGGT 2310
| | | |||| |||||| |||| || | | | ||||| ||||||||||| ||||||||
Sbjct 2511 TCCGTCAAGACACGGAAGAATCAG-GA-ACTGTCGAGCTCTTTGAAGTATATGATGTGGT 2568
Query 2311 TGTGTACATGGGAATCATAGATATTTTGCAGGAGTATAACACCAAGAAGAAAGTGGAACA 2370
|||||||||||| ||||| || || | || ||||| |||| |||||||||||||||||
Sbjct 2569 TGTGTACATGGGTATCATTGACATCCTCCAAGAGTACAACATGAAGAAGAAAGTGGAACA 2628
Query 2371 TACTTGCAAATCTTTGCAGTATGATCCGATGACAATATCTGTGACCGAACCTTCTACTT- 2429
||||||||||||| || | ||||||||||||||||| || | | ||| || | ||||
Sbjct 2629 TACTTGCAAATCTATGAAATATGATCCGATGACAATTTCAGCCATCGAGCCAAC-ACTTT 2687
Query 2430 ACTCAAAACGCTTTGTCAATTTTCTACACAAGGTGTTCCCAGAAGAAAG 2478
|||| ||||| || || |||| || | ||||| ||||||||| ||||
Sbjct 2688 ACTCTAAACGATTCATCGATTTCCTCCTTAAGGTATTCCCAGAA-AAAG 2735
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 99720261410
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5