BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G10930.1
Length=3916
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471231 jgi|Araly1|471231|fgenesh2_kg.1__1185__AT1G10930.1 6242 0.0
Ahg907367 jgi|Araly1|907367|Al_scaffold_0002_448 2250 0.0
Ahg944813 jgi|Araly1|944813|scaffold_701042.1 449 6e-125
> Ahg471231 jgi|Araly1|471231|fgenesh2_kg.1__1185__AT1G10930.1
Length=3923
Score = 6242 bits (3380), Expect = 0.0
Identities = 3750/3927 (95%), Gaps = 31/3927 (1%)
Strand=Plus/Plus
Query 16 TTCTACGGCCTTGAGCTCAAGTCGGTGGTGGCCATTTTATCCTGTGCTTCGTCTCGCCGA 75
|||||||||||||||||||||||||||||| |||||||||||| | |||||||| |||
Sbjct 1 TTCTACGGCCTTGAGCTCAAGTCGGTGGTGACCATTTTATCCTATATTTCGTCTCTTCGA 60
Query 76 CTTCCCTGATTGTTTCGCCGCCGGAGTGTTAAAAGCAACGTTACAGAAGCAAGAGACTCC 135
|||||| |||||||||| ||||||||||| |||| | |||||||||||||||| ||||||
Sbjct 61 CTTCCCGGATTGTTTCGTCGCCGGAGTGTCAAAATCGACGTTACAGAAGCAAG-GACTCC 119
Query 136 ACTGAATCGAAAATTGACTGA---ATTGCGGTGTCAAAGGAAGTAAAAATTACTGGAACC 192
||||||||||||||||||||| ||||||||||||| || ||| ||||||||||||||
Sbjct 120 ACTGAATCGAAAATTGACTGATCGATTGCGGTGTCAAGGGGAGTGAAAATTACTGGAACT 179
Query 193 TCTTCAACATGTTAGACC-CATGATTAATTCGAATCAAATGAGTAGGAGTCACCTCCCCG 251
|||||| ||||||| ||| | |||||||||||| |||||||||| ||||||| || || |
Sbjct 180 TCTTCAGCATGTTAAACCTC-TGATTAATTCGAGTCAAATGAGTTGGAGTCATCTTCCTG 238
Query 252 AAGTTCAGAAACCTAGAGGTCCTCAAACGAATTGGTCAGAACATGCAAAGGCGCTCGAGA 311
|||||||||||||||||||||||||||| |||||||||||||||||| |||| |||||||
Sbjct 239 AAGTTCAGAAACCTAGAGGTCCTCAAACAAATTGGTCAGAACATGCAGAGGCACTCGAGA 298
Query 312 GTTCATCATCGGTGACTAAGTTTCTGAGCTCCAATGTCCTTTACGCCCTAGAAAGCCAAA 371
||||||| || ||||||||||||||||||||||||||||||||||| |||||||| ||||
Sbjct 299 GTTCATCGTCCGTGACTAAGTTTCTGAGCTCCAATGTCCTTTACGCTCTAGAAAGTCAAA 358
Query 372 AGCCTAGAGATATGGCTGCAAGGTCAATTGCGTTTCCCAGTGTGAATGTGCATACTTTGG 431
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 359 AGCCTAGAGATATGTCTGCAAGGTCAATTGCGTTTCCCAGTGTGAATGTGCATACTTTGG 418
Query 432 CGCACCCGCAAATTTCAAAGGCTTGGCGTGCTCTTTCAAGTCTTTCAGTAAATAATACCT 491
||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||| |||
Sbjct 419 CGCACCCACAAATTTCAAAGGCTTGGCGTGCTCTTTCAAGTCTCTCAATAAATAATGCCT 478
Query 492 ACCTAAGACCTGGCGTTACTCCCCCCATTGATG-T--TGGCACCAATGACTCTTATTCTG 548
||||||||||||||||||||||||||||||||| | ||||||||||| ||| |||||||
Sbjct 479 ACCTAAGACCTGGCGTTACTCCCCCCATTGATGATGGTGGCACCAATGGCTCATATTCTG 538
Query 549 CAAGAGAGAGATCTACCGCAAAAGTTATATCTAGCACTGGTGGTTCTGTTTATTCGAGCA 608
|||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 539 CAAGAGAGGGATCCACCGTGAAAGTTATATCTAGCACTGGTGGTTCTGTTTATTCGAGCA 598
Query 609 -CTCGACCAAACCTAAGTGCAATGAATGTTTCAGGAACTGGAAGATCCTTTCATAGTTTC 667
| |||| ||||| || ||||||||||||||| |||||||||||||||||||| ||||||
Sbjct 599 GC-CGACAAAACCAAAATGCAATGAATGTTTCGGGAACTGGAAGATCCTTTCACAGTTTC 657
Query 668 CCTTCCTCTGTCCCTGGTGATGATAAAATAG-TTGCTGAAAAGTTTCCACGGGGAAACAA 726
||||||||||| | ||||| ||||||||| | |||||||||||||||||| ||||||| |
Sbjct 658 CCTTCCTCTGTACTTGGTGCTGATAAAAT-GATTGCTGAAAAGTTTCCACTGGGAAACGA 716
Query 727 TGAGATCAGAGAATCAGAACCCAGTTGCACGCATTTAAATGGTGTGGAGAAGTCATTCGG 786
||| ||||||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct 717 CGAGGTCAGAGAATCAGAACCCAGTTTCACTCATTTAAATGGTGTGGAGAAGTCATTCAC 776
Query 787 GAATTCTGCATTCCCAGCTGAGCAGTTCGAATCTAGAAAAGCATGTCTTGATGATATGGA 846
|||||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||
Sbjct 777 GAATTCTGCATTCCCACCTGAGCAGTTCGAATCTGGAAAAGCATGTCTTGGTGATATGGA 836
Query 847 TGATGATGACATACTTGAGAATATTGACGTCGACCAAATAGTGATGGAACACTACCATTC 906
|||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 837 TGATGATGACATACTTAAGAATATTGATGTCGACCAAATTGTGATGGAACACTACCATTC 896
Query 907 AACAAGTACCCCACAGCCATCAGTGTCTAATTTTTCGTTGAG-A----A-CT---CCACC 957
|||||||| || ||||||||||| ||||||||||| ||||| | | || |||||
Sbjct 897 GACAAGTACTCCTCAGCCATCAGTATCTAATTTTTCATTGAGAACTCCACCTGCCCCACC 956
Query 958 TGTAGATAGAAGTGCTTCCAGATTAGAAGAAGAGTGCAATCTGCCTCCTGAATTATGTTC 1017
||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 957 TGTGGATAGAAGTGCTTCCAGATTAGAAGAAGAGTGCTGTCTGCCTCCTGAATTATGTTC 1016
Query 1018 CAACTGTAGTCATGGAATAAAGTTGGGGCTTTGTCCAGAAGCTTCAACCCATGTGGAGCA 1077
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1017 CAACTGTAGTCATGGAATAAAGTTAGGGCTTTGTCCAGAAGCTTCAACCCATGTGGAACA 1076
Query 1078 GATGAAGGACGTGTTGCTTGCAATATCAAATGAACTCCTTGACGATGCTACTGACCTGAG 1137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1077 GATGAAGGACGTGTTGCTTGCAATATCAAATGAACTCCTTGACGATGCTACTGACCTGAG 1136
Query 1138 TCCTGATCGTGTTGGACAGCTCCGTCAAGAGAGGTTACGGCTGAAGAAACAAATTCAGCA 1197
|||| ||||||||| |||||| ||||||||||| |||| |||||||||||||||||||||
Sbjct 1137 TCCTTATCGTGTTGAACAGCTTCGTCAAGAGAGATTACAGCTGAAGAAACAAATTCAGCA 1196
Query 1198 GCTCGAGAACCATATCCGAGATAAAGAAAGCCAAAAATCTCAGTTTTTGTCATCGACAGC 1257
|||||||||||||||||||||||||||||| |||||||||||||||| |||||| |||||
Sbjct 1197 GCTCGAGAACCATATCCGAGATAAAGAAAGGCAAAAATCTCAGTTTTCGTCATCTACAGC 1256
Query 1258 TACTCGTATTTTCCAGTATGAAACACCTAAATCAACAAATTATAAAATGGATCAACCACA 1317
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1257 TACTCGTACTTTCCAGTATGAAACACCTAAATCAACAAATTATAAAATGGATCAACCACA 1316
Query 1318 AACTGATTTTCGAGCACATGTAAGTGACCAAGGCAGATATGCCTGTGATAGCTGGAACAC 1377
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct 1317 AACTGATTTTCGAGCACATCTAAGTGACCAAGGCAGATATGCCGGTGATAGCTGGAACAC 1376
Query 1378 GCCAAGAGATTCTTCCTTTTCTGTAGATAGATATGGTCTTTCATCTGCTCCTGTAGAGAG 1437
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1377 GCCAAGAGATTCTTCCTTTTCTGTTGATAGATATGGTCTTTCATCTGCTCCTGTAGAGAG 1436
Query 1438 GGAACAATATGTTCCAAAGATTATTGACGTAACCTACACTGAAGGTTCAAACGACAAAAA 1497
||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1437 GGAACCATATGTTCCAAAGATTATTGACGTGACCTACACTGAAGGTTCAAACGACAAAAA 1496
Query 1498 ATGGAGCAGTCGTGAATTTCCCTGGACAAGGAAATTGGAGGTTAATAACAAAAAAGTGTT 1557
||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct 1497 GTGGAGCAGTCGTGAATTTCCCTGGACAAGAAAACTGGAGGTTAATAACAAAAAAGTGTT 1556
Query 1558 TGGAAATCATTCGTTTCGACCTAACCAGAGAGAAATTATCAATGCAACAATGAGTGGCTC 1617
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1557 TGGAAATCATTCGTTTCGACCTAACCAGAGAGAAATTATCAATGCAACAATGAGTGGCTC 1616
Query 1618 TGATGTTTTTGTTTTGATGCCAACTGGAGGAGGGAAGAGTTTGACATATCAGCTCCCCGC 1677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1617 TGATGTTTTTGTTTTGATGCCAACTGGAGGAGGGAAGAGTTTGACATATCAGCTCCCCGC 1676
Query 1678 TCTGATCTGTGGAGGAATAACATTAGTAATTTCTCCACTTGTGTCTCTTATTCAAGACCA 1737
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct 1677 TCTGATCTGTGGAGGAATAACATTAGTCATTTCTCCACTTGTGTCGCTTATTCAAGACCA 1736
Query 1738 GATAATGAACCTATTGCAGGCCAATATACCAGCTGCTTCCCTAAGTGCCGGGATGGAATG 1797
|||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 1737 GATAATGAACCTATTGCAGGCCAATATACCGGCTGCTTCCCTAAGTGCCGGTATGGAATG 1796
Query 1798 GGCTGAACAACTAAAGATCTTTCAGGAGCTGAATTCCGAGCATTCTAAGTACAAGTTGCT 1857
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1797 GGCTGAACAACTGAAGATCTTTCAGGAGCTGAATTCCGAGCATTCTAAGTACAAGTTGCT 1856
Query 1858 ATATGTCACACCTGAAAAAGTAGCAAAAAGCGATTCTCTTTTAAGGCATCTGGAAAACTT 1917
||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct 1857 ATATGTCACACCTGAAAAAGTGGCAAAAAGCGATTCTCTTTTGAGGCATCTGGAAAACTT 1916
Query 1918 AAATTCTCGTGGTTTGCTTGCTCGGTTTGTTATTGATGAAGCTCATTGTGTGAGCCAATG 1977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1917 AAATTCTCGTGGTTTGCTTGCTCGGTTTGTTATTGATGAAGCTCATTGTGTGAGCCAATG 1976
Query 1978 GGGACATGACTTTCGACCAGACTACCAGAGTCTTGGTATTCTGAAGCAGAAATTTCCCAA 2037
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1977 GGGGCATGACTTTCGACCAGACTACCAGAGTCTTGGTATTCTGAAGCAGAAATTTCCCAA 2036
Query 2038 CATTCCCGTGTTAGCTTTAACAGCTACAGCAACAGCCAGTGTGAAAGAAGATGTGGTACA 2097
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2037 CATTCCTGTGTTAGCTTTAACAGCTACAGCAACAGCCAGTGTGAAAGAAGATGTGGTACA 2096
Query 2098 AGCCCTTGGCCTTGTTAACTGTGTCGTGTTCCGGCAAAGTTTTAATCGTCCAAATCTATG 2157
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2097 AGCCCTTGGCCTTGTTAACTGTGTCGTGTTCCGGCAAAGTTTTAATCGTCCAAATCTATG 2156
Query 2158 GTATTCTGTTGTTCCCAAGACAAAAAAGTGTCTGGAAGACATCGACAAATTTATTAAGGA 2217
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2157 GTATTCCGTTGTTCCCAAGACAAAAAAGTGTCTGGAAGACATCGACAAATTTATTAAGGA 2216
Query 2218 AAACCATTTTGATGAGTGTGGAATTATATATTGTCTTTCAAGAATGGACTGCGAAAAAGT 2277
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2217 AAACCATTTTGATGAATGTGGAATTATATATTGTCTTTCAAGAATGGACTGCGAAAAAGT 2276
Query 2278 CTCTGAACGGTTGCAGGAGTTTGGTCATAAAGCAGCATTCTACCATGGCAGTATGGAGCC 2337
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 2277 CTCTGAACGGTTGCAGGAGTTTGGTCATAAAACAGCATTCTACCATGGCAGTATGGAGCC 2336
Query 2338 TGAGCAACGTGCCTTTATACAGACACAATGGAGCAAGGACGAAATCAATATAATATGTGC 2397
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2337 TGAGAAACGTGCCTTTATACAGACACAATGGAGCAAGGACGAAATCAATATAATATGTGC 2396
Query 2398 TACTGTGGCATTTGGAATGGGAATCAACAAGCCTGATGTCCGCTTTGTTATTCATCACTC 2457
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2397 TACTGTGGCATTTGGAATGGGAATCAACAAGCCTGATGTCCGCTTTGTTATTCATCACTC 2456
Query 2458 GCTCCCAAAGTCTATAGAAGGCTATCATCAGGAATGCGGTCGTGCTGGCAGGGATGGCCA 2517
|||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2457 GCTCCCGAAGTCTATAGAAGGCTATCATCAGGAATGTGGTCGTGCTGGCAGGGATGGCCA 2516
Query 2518 GCGGTCATCTTGTGTTTTATATTACGGTTATGGCGACTATATACGAGTTAAGCATATGAT 2577
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2517 GCGGTCATCTTGTGTTTTGTATTACGGTTATGGCGACTATATACGAGTTAAGCATATGAT 2576
Query 2578 TAGCCAAGGAGGAGTTGACCAAAGCCCCATGGCAACTGGGTATAATCGTGTAGCAAGTTC 2637
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2577 TAGCCAAGGAGGAGTTGACCAAAGCCCCATGGCAACTGGGTATAATCGTGTAGCAAGTTC 2636
Query 2638 AGGGAGGTTACTTGAAACAAATACCGAAAACCTTCTCCGCATGGTTAGATACTGCGAAAA 2697
||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2637 AGGGAGGATACTTGAAACAAATACCGAAAACCTTCTCCGCATGGTTAGCTACTGCGAAAA 2696
Query 2698 TGAGGTGGAATGCCGACGTTTCCTACAACTAGTGCATTTGGGGGAAAAATTCGATTCCAC 2757
|||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||
Sbjct 2697 TGAGGTGGAATGCCGACGCTTCCTACAACTAGTGCATTTCGGGGAAAAATTCGATTCCAC 2756
Query 2758 AAACTGCaaaaaaaCGTGTGATAATTGTTGCAGTAGTCAGAGTTTGATTGACAAAGATGT 2817
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2757 AAACTGCAAAAAAACGTGTGATAATTGTTGCAGTAGTCAGAGTTTGATTGACAAAGATGT 2816
Query 2818 CACCTTGATCACAAGGCAACTGGTTGAACTGGTGAAGCAAACAGGAGAAAGGTTTTCTTC 2877
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2817 CACCTTGATCACAAGGCAACTGGTTGAACTGGTGAAGCAAACAGGAGAAAGGTTTTCTTC 2876
Query 2878 AGCTCATATTCTTGAAGTCTACAGAGGTTCCTTAAACCAAATGGTCAAGAAACACAGACA 2937
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2877 TGCTCATATTCTTGAAGTCTACAGAGGTTCCTTAAACCAAATGGTCAAGAAACACAGACA 2936
Query 2938 TGAGACTTTGCAGTTCCATGGAGCTGGAAAACATTTATCGAAAATTGAAGTCTCTCGTAT 2997
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2937 TGAGACTTTGCAGCTCCATGGAGTTGGAAAACATTTATCGAAAATTGAAGTCTCTCGTAT 2996
Query 2998 CTTGCATTATCTCGTAACAGAGGATATTCTTGTGGAAGATGTTAGGAAAAGTGATATGTA 3057
||| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2997 CTTACACTATCTCGTAACAGAGGACATTCTTGTGGAAGATGTTAGGAAAAGTGATATGTA 3056
Query 3058 TGGATCTGTGTCATCGTTGCTCCAGGTGAATAACGCAAAGGCTACCATACTATTTTCTGG 3117
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct 3057 TGGATCTGTGTCATCGTTGCTCAAGGTGAATAACGCAAAGGCTACCTTACTATTTTCTGG 3116
Query 3118 AAGCCAGACTATAGTGATGAAGTTCCCTTCTTCTGTAAAAGTATTAAAGCCAAGTAAACA 3177
||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 3117 AAGCCAGACTATAATGATGAAATTCCCTTCTTCTGTAAAAGTATTAAAGCCAAGTAAACA 3176
Query 3178 GGGGGCAACCGCAGCAAAAGGTCCGCTAACATCAGAGAAGCAAAGTACTCTTCCACTTAC 3237
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3177 GGGAGCAACCGCAGCAAAAGGTCCTCTAACATCAGAGAAGCAAAGTACTCTTCCACTTAC 3236
Query 3238 AACAGAAGATGCTCCTCCAAAAGATGTGAATCTCTCTGCCAACATGTACACAGCCTTGAG 3297
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 3237 AACAGAAGATGCTCCTCCAAAAGATTTGAATCTCTCTGCCAACATGTACACAGCCTTGAG 3296
Query 3298 GAAGCTTCGTACAGCTCTTGTCAAAGAAGCCCCTGATGGTGTCATGGCATATCATATATT 3357
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3297 GAAACTTCGTACAGCTCTTGTCAAAGAAGCCCCTGATGGTGTCATGGCATATCATATATT 3356
Query 3358 CATCAATTCAACGCTTCAGCAGATAAGCAGACGGATACCCAGAACCAAAGAGGAACTCCT 3417
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 3357 TATCAATTCAACGCTTCAGCAGATAAGCAGACGAATTCCCAGAACCAAAGAGGAACTCCT 3416
Query 3418 TGAAATCAATGGCCTTGGGAAGGCCAAAGTAAGCAAGTACGGTGATCAGTTGTTGGAAAC 3477
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3417 TGAAATCAATGGCCTTGGGAAGGCCAAAGTAAGCAAGTACGGTGATCGGTTGTTGGAAAC 3476
Query 3478 AATAGAAACAACGGTGAACGAGTACTATGGAACCAATAAGAAAGACTCCATCATCAGCAA 3537
||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct 3477 AATAGAAACAACGGTGAACGAGTACTACGGAACTAATAAGAAAGACTCCATCATCAGCAA 3536
Query 3538 CGATAGTCCCGATTCAGGGAAGAGAAGAAGAGACGAGAACATTAGTCCAAATGTAGCCGA 3597
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3537 CGACAGTCCCGATTCAGGGAAGAGGAGAAGAGACGAGAACATTAGTCCAAATGTAGCCGA 3596
Query 3598 GGATGATGATTTCGAAGTAAGCCCAAGCCAGTCCTGCaaaaaaaCAGTGAGAAACAAAAG 3657
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 3597 GGATGATGATTTCGAAGTAAGCCCAAGCCAGTCCTGCAAAAAGACAGTGAGAAACAAAAG 3656
Query 3658 CAATGAGGTTCTTCATGGTGAATGTATAGATGGAGATAGAAGAGGCATGG--A-G----- 3709
||||||||||||||||||||||||| |||||||||||||||||||||||| | |
Sbjct 3657 CAATGAGGTTCTTCATGGTGAATGTGTAGATGGAGATAGAAGAGGCATGGTTATGGAGAA 3716
Query 3710 -CTTGATTTTGATTTCAAAGACGAAGATGGGTCAGAGATACGACCGGAGGGAAGAGTATT 3768
||||| |||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct 3717 GCTTGACTTTGATTTCAGAGACGAAGATGTGTCAGAGATACGACCGGAGGGAAGAGTATT 3776
Query 3769 ACCGTGGTGAAGTTGTGACCACTGAAATTTTAGTTGTAAAGAAATTTTGATGTAATATTT 3828
||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct 3777 ACCTTGGTGAAGTTGTGACCACTGAAATTATAGTTGTAAAGAAATTTTGCTGTAATATTT 3836
Query 3829 TGTTAACTTCTATGGCCTACTCAATGTACCTTAATTTTCAGTAGATTGAAGAAACTAGTT 3888
||||||||||| |||||||||||||||||||| || |||||||||||| |||||||| ||
Sbjct 3837 TGTTAACTTCTGTGGCCTACTCAATGTACCTTGATGTTCAGTAGATTGCAGAAACTATTT 3896
Query 3889 ATTAAATGCTGACTTCTTTGATGATCT 3915
|||| ||||||||||| ||||||||||
Sbjct 3897 ATTAGATGCTGACTTCATTGATGATCT 3923
> Ahg907367 jgi|Araly1|907367|Al_scaffold_0002_448
Length=3519
Score = 2250 bits (1218), Expect = 0.0
Identities = 2668/3343 (80%), Gaps = 199/3343 (6%)
Strand=Plus/Plus
Query 237 GGAGTCACCTCCCCGAAGTTC-AGAAA-CCTAGAGGT--C---C-TCAAACGAATTGGTC 288
||||||| ||||| |||| || | ||| || |||||| | | |||||| ||||||||
Sbjct 128 GGAGTCATCTCCCTGAAG-TCAATAAATCC-AGAGGTCACTTTCTTCAAACAAATTGGTC 185
Query 289 AG-AACATGCAAAGGCGCTCGAGAGT-TCATCATCGGTGACTAAGTTTCTGAGCTCCAAT 346
| ||||||| ||||| | ||| || | | |||| ||| ||||||| || ||||||||
Sbjct 186 -GAAACATGCCAAGGCTTTTGAGTGTAT-ACCATCCTTGAATAAGTTTATGGGCTCCAAT 243
Query 347 GTCCTTTACGCCCTAGAAAGCCAAAAGC---C------TAGAGATATGGCTGCAAGGTCA 397
|||||||| | |||||||| ||||||| | |||||| |||| |||||||||
Sbjct 244 TTCCTTTACTCTCTAGAAAGTCAAAAGCTGGCAAGAGATAGAGAAATGGGTGCAAGGTCT 303
Query 398 ATTG----CGTTTC-CCAGTGTGAA-TGTGCATACTTTGGCGC-ACCCGCAAATTTCAAA 450
|||| | | | || ||| || |||||| |||||||| | ||| | ||||| |||
Sbjct 304 ATTGAAAACATCGCTCC--TGT-AACTGTGCAAACTTTGGCACGACCAG-AAATTGAAAA 359
Query 451 GGCTTGGCGTGCTCTT-TCAAGTCTTTCAGTAAATAATACCTACCTAAGACCTGGCGTTA 509
||| ||| || ||||| | || ||| ||| |||||||||| ||||| ||||||||| |||
Sbjct 360 GGCGTGGTGTACTCTTAT-AAATCTCTCAATAAATAATACTTACCTGAGACCTGGCATTA 418
Query 510 CTCCCCCCATTGATGTTGGCACCAATGACTC-TT-ATTC-TGC-AAGAGAGAGATCTACC 565
|||| | ||||||| ||||| || ||| || || | || | | | || | ||||| ||
Sbjct 419 CTCCTGCAATTGATGATGGCAGCACTGA-TCGTTCA-TCAT-CTACGA-AAAGATCCACT 474
Query 566 GCAAAAGTTATATCTAGCACTGGTGGTTCTGTTTATTCG-AGCAC--TCGA-CCA-AACC 620
| ||||||| ||| || ||| ||| || ||| | || | ||| || | ||| | |
Sbjct 475 GTTAAAGTTACATCCAGTGCTGATGGATC--TTTCTACGCA-CACAATC-ATCCAGAGCA 530
Query 621 TAAGTGCAATGAATGTTT--CAGGAACTGGAAGATCCTTTCATAGTTTCCCTTCCTCTGT 678
| ||| ||| | | |||| ||| |||| || ||| ||| | |||||| | |||||| |
Sbjct 531 T-AGT-CAAAGGA-GTTTAAGAGGCACTGCAAAATCATTTGACAGTTTCTCATCCTCT-T 586
Query 679 CCCT-GGTGATGATAAAATAGTTGCTGAAAAGTTTCCACGGGGAAACAATGAGATCAGAG 737
|| | |||||| |||| ||| | || ||| ||||||||| || ||||| | ||||
Sbjct 587 CCGTAGGTGATAATAACATAACTATTGGCAAGGTTCCACGGGTCAATGATGAGGTTAGAG 646
Query 738 AATCAG-AACCCAGTTGCACGCATTTAAATGGTGTGGAGAAG---TCATTCGGGAATTCT 793
| |||| || | |||| | || ||||||| |||||| | || || |||||
Sbjct 647 ATTCAGTAA-CGGGTTGTAAATATACAAATGGTATGGAGATGCCACCAATCAAAAATTCC 705
Query 794 GCATTCCCAGCTGAG-CAGTTCGAATCTAGAAAAGCAT-GTCTTGATGATATGGATGATG 851
||| || || | || | | | || |||| |||| | |||||| ||| || ||| |||
Sbjct 706 GCACACCTAG-TCAGACTGGTGGAGCCTAGGGAAGC-TAGTCTTGGTGAGATTGATTATG 763
Query 852 ATGACATACTTGAGAATATTGACGTCGACCAAATAGTGATGGAACACTACCATTCAACAA 911
|||||||| | |||| |||||| || || || || |||||||| |||| || |||||
Sbjct 764 ATGACATAATGGAGATTATTGAGGTAGATCAGATTGTGATGGACCACTGCCCTTCAAGGT 823
Query 912 GTACCCCA-CAGCCATCAGTGTCTAATTTTTCGTTGAGAACTCCACCTGTAGATAGAAGT 970
|| ||| | || |||||||| ||||| ||| | || | | | | | || |
Sbjct 824 GT-CCCAAGCAACCATCAGTATCTAA-GTTT-G-TG-G-A-T--A-C-----AT----TT 864
Query 971 GCTTCCAGATTAGAAGAAGAGTGCAA--TCTGCCTCCTGAATTATGTTCCAACTGTAGTC 1028
||||||||| ||||||||| |||| | || ||||||||||||||||||||||||||
Sbjct 865 GCTTCCAGAAGAGAAGAAGA--GCAAGGTTTGTTTCCTGAATTATGTTCCAACTGTAGTC 922
Query 1029 ATGGAATAAAGTTGGGGCTTTGTCCAGAAGCTTCAACCCATGTGGAGCAGATGAAGGACG 1088
||||||||||| | ||||||||||| |||||||| ||||||||||| || ||||||||
Sbjct 923 ATGGAATAAAGCTAGGGCTTTGTCCTGAAGCTTCTACCCATGTGGAACAAATGAAGGATA 982
Query 1089 TGTTGCTTGCAATATCAAATGAACTCCTTGACGATGC-TACTGACCTGAGTCCTGATCGT 1147
| |||||||||||||||||||| |||| ||| || | || ||||||| | || |||| |
Sbjct 983 CGCTGCTTGCAATATCAAATGAATTCCTCGACAATACTTA-TGACCTGGGCCCCGATCAT 1041
Query 1148 GTTGGACAGCTCCGTCAAGAGAGGTTACGGCTGAAGAAA-CAAATTCAGCAGCTCGAGAA 1206
|||| |||||| |||||| ||||||||| | |||| ||| ||||| |||||||||||||
Sbjct 1042 GTTGAACAGCTTCGTCAAAAGAGGTTACTGTTGAA-AAAGCAAATCCAGCAGCTCGAGAT 1100
Query 1207 CCATATCCGAGATAAAGAAAGCCAAAAATCTCAGT-TTTTGTCATCGACAGCTACTCGT- 1264
|| ||||| | |||||||||| |||||||| ||| ||| || ||| ||| || ||| |
Sbjct 1101 CCTTATCCAAAATAAAGAAAGGAAAAAATCTGAGTGTTTGGT-ATCTACACCTTCTCATA 1159
Query 1265 ATTTTCCAGTATGAAACACCT-AAATCAACAAATTATAAAATGGATCA-ACCACAAACTG 1322
|| || ||||||||||||||| ||| |||||||| || ||| | | | | || || |
Sbjct 1160 ATATT-CAGTATGAAACACCTCAAA-CAACAAATCATGTGGTGGTTTATA-CGCAGACAG 1216
Query 1323 ATT-TTC-GAGC--A-CATGT--AAG----TG---A-C--C--AAGGCAGATATGCCTGT 1363
||| | | || | | ||||| | || | | | |||||||||||| |
Sbjct 1217 ATTCTCCTGA-CAAATCATGTGGTGGTTTATGCCCAGCAACGGAAGGCAGATATGTAACT 1275
Query 1364 GATAGCTGGAACACGCCAAGAGATTCTTCCTTTTCTGTAGATAGATATGGTCTTTCATCT 1423
|||| |||||| | ||||||||| | || ||||| ||| || |||| | ||||||||
Sbjct 1276 GATAACTGGAATATGCCAAGAGACTATTTAGTTTCTAAAGAGAGGTATGATATTTCATCT 1335
Query 1424 GCTCCTGTAGAGAGGGAACAATATG-TTCCAAAGATTATTGACGTAACCT-ACACTGAAG 1481
| | |||||||||||||||||| || |||| || |||| || || | || | || | ||
Sbjct 1336 GGTTCTGTAGAGAGGGAACAATCTGTTTCC-GAGGTTATAGATGTCA-CTGATACCG-AG 1392
Query 1482 -GTTCAAACGACAAAAAATGGAG-CAGTCGTGAATTTCCCTGGAC-AAGGAAAT-TGGAG 1537
||||||| |||||||| ||| | ||||||||| ||||| ||||| || |||| |||||
Sbjct 1393 AGTTCAAATGACAAAAAGTGG-GCCAGTCGTGATTTTCCTTGGACGAA--AAATCTGGAG 1449
Query 1538 GT-TAATAACAAAAAAGTGTTTGGAAATCATTCGTTTCGACCTAACCAGAGAGAAATTAT 1596
|| | ||||||||| |||||||||||| || || |||||||| ||||| ||||| || ||
Sbjct 1450 GTCT-ATAACAAAATAGTGTTTGGAAACCACTCATTTCGACCAAACCAAAGAGAGATCAT 1508
Query 1597 CAATGCAACAATGAGTGGCTCTGATGTTTTTGTTTTGATGCCAACTGGAGGAGGGAAGAG 1656
||||| ||||||||||| | |||||||||||||||||||||||| ||||| ||||| ||
Sbjct 1509 TAATGCTACAATGAGTGGTTGTGATGTTTTTGTTTTGATGCCAACCGGAGGGGGGAAAAG 1568
Query 1657 TTTGACATATCAGCTCCCCGCTCTGA-TCTGTGGAGGAATAACATTAGTAATTTCTCCAC 1715
||||||||||||||||| ||||| | |||||| ||||||||||||||| ||||||||||
Sbjct 1569 CTTGACATATCAGCTCCCTGCTCT-ACTCTGTGCAGGAATAACATTAGTCATTTCTCCAC 1627
Query 1716 TTGTGTCTCTTATTCAAGACCAGATAATGAACCTATTGCAGGCCAATATACCAGCTGCTT 1775
|||| || || ||||||||||||||||||||| |||||||| |||||||| | |||||||
Sbjct 1628 TTGTTTCACTCATTCAAGACCAGATAATGAACTTATTGCAGACCAATATAGCTGCTGCTT 1687
Query 1776 CCCTAAGTGCCGGGATGGAATGGGCTGAACAACTAAAGAT-CTTTCAGGAGCTGAATTCC 1834
|| |||||||||| ||||| ||||||||||| ||| |||| | |||||||||||| ||
Sbjct 1688 CCTTAAGTGCCGGAATGGAGTGGGCTGAACAGCTAGAGATAC-TTCAGGAGCTGAGCTCT 1746
Query 1835 GAGCATTCTAAGTACAAGTTGCTATATGTCACACCTGAAAAAGTAGCAAAAAGCGATTCT 1894
||| ||||||| |||||||| || ||||| ||||| |||||||| |||||||| || ||
Sbjct 1747 GAGAATTCTAAATACAAGTTACTGTATGTAACACCAGAAAAAGTGGCAAAAAGTGAATCC 1806
Query 1895 CTTTTAAGGCATCTGGAAAACTTAAATTCTCGTGGTTTGCTTGCTCGGTTTGTTATTGAT 1954
||| ||||||| || |||| |||||| || ||| ||||||||||||| ||||||||||||
Sbjct 1807 CTTATAAGGCACCTCGAAATCTTAAACTCCCGTAGTTTGCTTGCTCGATTTGTTATTGAT 1866
Query 1955 GAAGCTCATTGTGTGAGCCAATGGGGACATGACTTTCGACCAGACTACCAGAGTCTTGGT 2014
||||||||||||||||| || ||||| |||||||||||||||||||||||| ||||||||
Sbjct 1867 GAAGCTCATTGTGTGAGTCAGTGGGGGCATGACTTTCGACCAGACTACCAGGGTCTTGGT 1926
Query 2015 ATTCTGAAGCAGAAATTTCCCAACATTCCCGTGTTAGCTTTAACAGCTACAGCAACAGCC 2074
||||||||||||| ||||| ||||||||| |||||||||| |||||||| |||||| ||
Sbjct 1927 GTTCTGAAGCAGAAGTTTCCTAACATTCCCATGTTAGCTTTGACAGCTACTGCAACAACC 1986
Query 2075 AGTGTGAAA-GAAGATGTGGTACAAGCCCTTGGCCTTGTTAACTGTGTCGTGTTCCGGCA 2133
|| || ||| |||||||| |||||||| ||||| || || |||||||| || ||||||||
Sbjct 1987 AGCGT-AAAGGAAGATGTTGTACAAGCTCTTGGGCTGGTAAACTGTGTTGTTTTCCGGCA 2045
Query 2134 AAGTTTTAATCGTCCAAATCTATGGTATTCTGTTGTTCCCAAGACAAAAAAGTGTCTGGA 2193
|||||||||||| || ||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2046 AAGTTTTAATCGCCCTAATCTATGGTATTCTGTTGTTCCCAAGACGAATAAGTGTCTGGA 2105
Query 2194 AGACATCGACAAATTTATTAAGGAAAACCATTTTGATGAGTGTGGAATTATATATTGTCT 2253
||| || ||||| ||||| |||||||||||||||||| ||||| || || ||||||||
Sbjct 2106 AGATATTGACAAGTTTATCCGGGAAAACCATTTTGATGAATGTGGCATCATTTATTGTCT 2165
Query 2254 TTCAAGAATGGACTGCGAAAAAGTCTCTGAACGGTTGCAGGAGTTTGGTCATAAAGCAGC 2313
||||||||||||||||||||||||| | ||| ||||| || |||||| |||||||| ||
Sbjct 2166 TTCAAGAATGGACTGCGAAAAAGTCACGGAAATGTTGCGGGCGTTTGGCCATAAAGCGGC 2225
Query 2314 ATTCTACCATGGCAGTATGGAGCCTGAGCAA-CGTGCCTTTATACAGACACAATGGAGCA 2372
|||||||||||||||||||| |||| | || ||||||||| |||||| |||||||||||
Sbjct 2226 CTTCTACCATGGCAGTATGGATCCTG-GTAAACGTGCCTTTGTACAGAAACAATGGAGCA 2284
Query 2373 AGGACGAAATCAATATAATATGTGCTACTGTGGCATTTGGAATGGGAATCAACAAGCCTG 2432
|||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||||
Sbjct 2285 AGGATGAAATCAATATAATATGTGCTACAGTGGCATTTGGAATGGGAATCAATAAGCCTG 2344
Query 2433 ATGTCCGCTTTGTTATTCATCACTCGCTCCCAAAGTCTATAGAAGGCTATCATCAGGAAT 2492
|||| || ||||| |||||||| || || |||||||| ||||||||||||||||||||||
Sbjct 2345 ATGTTCGTTTTGTAATTCATCATTCTCTACCAAAGTCCATAGAAGGCTATCATCAGGAAT 2404
Query 2493 GCGGTCGTGCTGGCAGGGATGGCCAGCGGTCATCTTGTGTTTTATATTACGGTTATGGC- 2551
| ||||||||||| || || |||||| ||||||| |||||||| |||||| |||| |
Sbjct 2405 GTGGTCGTGCTGGTAGAGACGGCCAGAGGTCATCATGTGTTTTGTATTACAGTTACA-CT 2463
Query 2552 GACTATATACGAGTTAAGCATATGATTAGCCAAGGAGGAGTTGACCAAAGCCCCATGGCA 2611
|| ||||| ||||| |||||||||||||||||||||||| ||| |||| ||| ||| |
Sbjct 2464 GATTATATTCGAGTGAAGCATATGATTAGCCAAGGAGGACTTGGCCAAGGCCAGATGAAA 2523
Query 2612 ACTGGG-TATAATCGTGTAGCAAGTTCAGGGAGGTTACTTGAAACAAATACCGAAAACCT 2670
| |||| |||||| || |||||||||||||||| | || ||||| || || ||||||||
Sbjct 2524 A-TGGGATATAATTGTAAAGCAAGTTCAGGGAGGATGCTCGAAACGAACACGGAAAACCT 2582
Query 2671 TCTCCGCATGGTTAGATACTGCGAAAATGAGGTGGAATGCCGACGTTTCCTACAACTAGT 2730
||||||||||||||| ||||| |||||||||||||| || |||||||||||||| |||||
Sbjct 2583 TCTCCGCATGGTTAGTTACTGTGAAAATGAGGTGGACTGTCGACGTTTCCTACAGCTAGT 2642
Query 2731 GCATTTGGGGGAAAAATTCGATTCCACAAACTGCaaaaaaaCGTGTGATAATTGTTGCAG 2790
|||||||| |||||||| ||||| ||||||||||||||||| ||||||||||||| |||
Sbjct 2643 TCATTTGGGAGAAAAATTTGATTCAACAAACTGCAAAAAAACATGTGATAATTGTTCCAG 2702
Query 2791 TAGTCAGA-GTTTGATTGACAAAGATGTCACCT-TGATCACAAGGCAACTGGTTGAACTG 2848
|| || | ||||||||||||||||||| || | |||| ||||||||||||| ||||||
Sbjct 2703 CAG-CAAAAGTTTGATTGACAAAGATGTAAC-TGTGATTGCAAGGCAACTGGTGGAACTG 2760
Query 2849 GTGAAGCAAACAGGAGAAAGGTTTTCTTCAGCTCATATTCTTGAAGTCTACAGAGGTTCC 2908
|| |||| |||||||||||||||||| |||||||||||| | ||| ||||||| || |||
Sbjct 2761 GTTAAGCTAACAGGAGAAAGGTTTTCGTCAGCTCATATTGTAGAAATCTACAGGGGATCC 2820
Query 2909 TTAAACCAAAT-GGTCAAGA-AACACAGACATGAGACTTTGCAGTTCCATGGAGCTGGAA 2966
|||||||| | |||||||| || ||||||| ||||||||||| |||| ||||| ||||
Sbjct 2821 TTAAACCAG-TCGGTCAAGAGAA-ACAGACAAGAGACTTTGCACCTCCACGGAGCAGGAA 2878
Query 2967 AACATTTATCGAAAATTGAAGTCTCTCGTATCTTGCATTATCTCGTAACAGAGGATATTC 3026
| |||||| | |||| ||||| ||||||||| ||||| ||||| || |||||||||||||
Sbjct 2879 AGCATTTAGCTAAAAGTGAAGCCTCTCGTATTTTGCACTATCTTGTGACAGAGGATATTC 2938
Query 3027 TTGTGGAAGATGTTAGGAAAAGTGATATGTATGGATCTGTGTCATCGTTGCTCCAGGTGA 3086
| | || | |||||| ||||||||| ||||||||||||| || |||||||| ||||||
Sbjct 2939 TCGCAGAGGGTGTTAGAAAAAGTGATCTGTATGGATCTGTATCGTCGTTGCTGAAGGTGA 2998
Query 3087 ATA-ACGCAAAGGCTACCATA-CTATTTTCTGGAAGCCAGACTATAGTGATGAAGTTCCC 3144
||| | ||||||| || | || || |||||| |||||| |||| ||||| ||| ||
Sbjct 2999 ATAGAT-CAAAGGCCGCC-TCGCTCTTATCTGGAGGCCAGAGTATAACGATGAGGTTTCC 3056
Query 3145 TTCTTCTGTAAAAGTATTAAAGCCAAGTAAA-CAGGGGGCAACCGCAGCAAAAGGTCCGC 3203
||| | |||||| | |||||| || ||| | || | |||||||| |||
Sbjct 3057 TTCGACCATAAAAGCGTCAAAGCCGAGCAAATC------CA-C---AGCAAAAGTTCC-- 3104
Query 3204 TAACATCAGAGAAGCAAAGTACTCTTCCACTTACAACAGAAGATGCTCCTCCAAAAGATG 3263
| | | | | | ||||| |||||||||| | ||| | | | ||| || | | |||||
Sbjct 3105 -A-C-T-A-A-A-GCAAACTACTCTTCCAATGGCAA-A-A-GCTGC-CC-C-ACAAGAT- 3150
Query 3264 T-GAATCTCTCTGCCAACAT---GTACACAGCCTTGAGGAAGCTTCGTACAGCTCTTGTC 3319
| ||||||| | ||| ||| || |||||||||| ||||||||| | | | |||||
Sbjct 3151 TCGAATCTCCC--CCA-CATTTTGTTGACAGCCTTGAAAAAGCTTCGTTCTGATATTGTC 3207
Query 3320 AAAGAAGCCCCTGATGGTGTCATGGCATATCATATATTCATCAATTCAACGCTTCAGCAG 3379
|||||| || | ||||| ||||||||||||||||||||| |||| | |||||| | |||
Sbjct 3208 AAAGAATCCTCAGATGGAGTCATGGCATATCATATATTCGGCAATGCGACGCTTGAACAG 3267
Query 3380 ATAAGCAGACGGA-TACCCAGAACCAAAGAGGAACTCCTTGAAATCAATGGCCTTGGGAA 3438
||||| | ||| | | |||||||||||||||||||||||||| |||||||| || || ||
Sbjct 3268 ATAAGTAAACG-ACTTCCCAGAACCAAAGAGGAACTCCTTGATATCAATGGTCTAGGAAA 3326
Query 3439 GGCCAAAGTAAGCAAGTACGGTGATCAGTTGTTGGAAACAATA 3481
||||| || ||||| ||||| |||| ||| |||||||| |||
Sbjct 3327 AGCCAAGGTGAGCAAATACGGAGATCGGTTATTGGAAACCATA 3369
> Ahg944813 jgi|Araly1|944813|scaffold_701042.1
Length=1939
Score = 449 bits (243), Expect = 6e-125
Identities = 350/400 (88%), Gaps = 13/400 (3%)
Strand=Plus/Plus
Query 3168 CAAGTAAACAGGGGGCAACCGC-AGCAAAAGGTCCGCTAACATCAGAGAAGCAAAGTACT 3226
||||||||| |||||||||| | |||||||| ||||||| ||||||||||||||||||||
Sbjct 1543 CAAGTAAACCGGGGGCAACC-CTAGCAAAAGATCCGCTAGCATCAGAGAAGCAAAGTACT 1601
Query 3227 CTTCCACTTACAAC-AGAAGATGCTCCTCCAAAAGATGTGAATCTCT-CTGCCAACATGT 3284
||||||||| |||| | |||||| || ||||| |||| | ||||||| || |||||| |
Sbjct 1602 CTTCCACTTCCAACTA-AAGATGGTCTTCCAATAGATATTAATCTCTCCT-TCAACATTT 1659
Query 3285 ACACAGCCTTGAGGAAGCTTCGTACAGCTCTTGTCAAAGAAGCCCCTGATGGTGTCATGG 3344
|||||||| |||||||||||||||||||||||| || ||||| |||||||||||||||||
Sbjct 1660 ACACAGCCGTGAGGAAGCTTCGTACAGCTCTTGCCAGAGAAGGCCCTGATGGTGTCATGG 1719
Query 3345 CATATCATATATTCATCAATTCAACGCTTCAGCAGATAAGCAGACGGATACCCAGAACCA 3404
||||||| |||||||| |||||||||||||||||||||||||| | || || |||||||
Sbjct 1720 CATATCAGATATTCATGAATTCAACGCTTCAGCAGATAAGCAGGCAAATTCCGAGAACCA 1779
Query 3405 AAGAGGAACTCCTTGAAATCAATGGCCTTGGGAAGGCCAAAGTAAGCAAGTACGGTGATC 3464
||||||||||||| ||||||||||||||| | |||| |||||||| |||||||||||||
Sbjct 1780 AAGAGGAACTCCTCCAAATCAATGGCCTTGTGCAGGCTAAAGTAAGTAAGTACGGTGATC 1839
Query 3465 AGTTGTTGGAAACAATAGAAACAACGGTGAACGAGTACTATGGAACCAATAAGAAAGA-C 3523
|||||| |||||||||||||||||||||||||||||||| |||||||| |||||||| |
Sbjct 1840 GGTTGTTAGAAACAATAGAAACAACGGTGAACGAGTACTACGGAACCAAAAAGAAAGATC 1899
Query 3524 TC-----CAT-CATCAGCAACGATAGTCCCGATTCAGGGA 3557
| ||| |||||| |||| ||| ||||||||||||
Sbjct 1900 CCATAATCATTCATCAGTAACGGCAGTACCGATTCAGGGA 1939
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 148005901397
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5