BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G11160.1
Length=3812
Score E
Sequences producing significant alignments: (Bits) Value
Ahg471250 jgi|Araly1|471250|fgenesh2_kg.1__1204__AT1G11160.1 5297 0.0
> Ahg471250 jgi|Araly1|471250|fgenesh2_kg.1__1204__AT1G11160.1
Length=3716
Score = 5297 bits (2868), Expect = 0.0
Identities = 3415/3669 (93%), Gaps = 77/3669 (2%)
Strand=Plus/Plus
Query 15 aaaaatctcttcttttctttctaagttcttctttaaatctctaatctcagcaggaagcaa 74
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1 AAAAATCTCTTCTTTTCTTTCTAAGTTCTTCTTTAAATCTTTAATCTCAGCAGGAAGCAA 60
Query 75 tctct-tATGTCTCAAGTTTCTATTTTCCGAATCTCCCAGAAATCTTCAACTCTGTCTTG 133
||||| | |||||||||||||||||||| ||||||| ||||||||| ||||||||||||
Sbjct 61 TCTCTCT-TGTCTCAAGTTTCTATTTTCTTAATCTCCGAGAAATCTTGAACTCTGTCTTG 119
Query 134 TCGTCTAGTCACATTTTGAATTTTTAAACCAGCTCCGACAtttttttgtttttAATTCTT 193
|||||||||||||||||||||||||| |||| | || | | | ||||||
Sbjct 120 TCGTCTAGTCACATTTTGAATTTTTACACCA----C--CA-------G-CTCTCATTCTT 165
Query 194 TTCGATTCATAACAAAGGCTGGTGATTTGGCTTCAGCTTCCTAGTCGCATGAATCTACTG 253
|||||||||||||||||||||| ||||||| ||||||||| || ||||||||||||||||
Sbjct 166 TTCGATTCATAACAAAGGCTGGAGATTTGGTTTCAGCTTCGTAATCGCATGAATCTACTG 225
Query 254 AAATCGAGTAGAAAATGGCGAAGCGTGGATATAAGCTACAGGAGTTTGTGGCACATTCTG 313
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct 226 AAATCGAGTAGATGATGGCGAAGCGTGGATATAAGCTACAAGAGTTTGTGGCACATTCCG 285
Query 314 GAAATGTGAATTGTCTAAGTATCGGAAAGAAGACGTCACGGCTCCTTCTAACAGGTGGAG 373
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 286 GAAATGTGAATTGTCTAAGTATCGGAAAGAAGACGTCACGGCTCCTTCTAACTGGTGGAG 345
Query 374 ATGATTATAAGGTCAACCTTTGGTCAATCGGCAAAACCACTTCTCCAATGAGTCTTTGTG 433
||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 346 ATGATTATAAGGTCAACCTTTGGTCAATCGGCAAAACCACTTCGCTAATGAGTCTTTGTG 405
Query 434 GGCATACAAGCCCGGTTGATTCAGTAGCTTTTAACTCAGAAGAAGTTTTGGTACTCGCTG 493
||||||||||||||||||||||||||||||||||||| | |||| ||||||| |||| ||
Sbjct 406 GGCATACAAGCCCGGTTGATTCAGTAGCTTTTAACTCGGGAGAAATTTTGGTGCTCGGTG 465
Query 494 GGGCTTCTTCAGGTGTGATAAAGCTGTGGGATCTAGAAGAATCAAAGATGGTTCGAGCTT 553
| |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||
Sbjct 466 GAGCTTCTTCAGGTGTGATAAAGCTGTGGGATGTAGAAGAAGCAAAGATGGTTAGAGCTT 525
Query 554 TTACTGGACACAGATCCAATTGTTCTGCTGTTGAGTTTCATCCATTTGGTGAATTTCTTG 613
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 526 TTACTGGACACAGATCCAATTGTTCTGCTGTTGAGTTTCATCCATTTGGTGAATTTCTTG 585
Query 614 CATCGGGATCTAGTGACACCAATCTAAGGGTTTGGGATACCAGAAAGAAGGGATGCATCC 673
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct 586 CATCGGGATCTAGTGACACAAATCTAAGGGTTTGGGATACTAGAAAGAAGGGATGCATCC 645
Query 674 AAACATACAAGGGTCATACTCGCGGCATCAGCACTATTGA-ATTTAGCCCTGATGGTCGT 732
|||||||||||||||||||| |||| || ||||||| | | |||||| ||||||||||||
Sbjct 646 AAACATACAAGGGTCATACTTGCGGTATTAGCACTA-TCAGATTTAGTCCTGATGGTCGT 704
Query 733 TGGGTAGTGTCTGGAGGACTTGACAACGTTGTAAAGGTATGGGATTTGACTGCTGGAAAG 792
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 705 TGGGTAGTGTCCGGAGGACTTGACAATGTTGTAAAGGTATGGGATTTGACTGCTGGAAAG 764
Query 793 CTATTGCATGAGTTTAAGTGTCATGAAGGACCTATTCGCTCCCTAGACTTCCATCCGCTG 852
|| ||||| || ||||||| ||||||||||||||| || || ||||| |||||||||||
Sbjct 765 CTTTTGCACGAATTTAAGTTTCATGAAGGACCTATCCGTTCGCTAGAATTCCATCCGCTT 824
Query 853 GAGTTTCTCTTAGCCACTGGTTCTGCTGACAGGACTGTGAAATTCTGGGATTTGGAAACG 912
||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct 825 GAGTTTCTCCTAGCCACAGGTTCTGCTGACAGAACTGTGAAATTCTGGGATTTGGAAACG 884
Query 913 TTTGAACTGATTGGAACTACTAGACCAGAGGCTACTGGAGTTCGTGCAATCGCTTTTCAT 972
||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 885 TTTGAACTGATTGGATCTACTAGACCAGAGGCTGCTGGAGTTCGTGCAATCGCTTTTCAT 944
Query 973 CCAGATGGTCAAACCCTTTTCTGTGGATTGGATGATGGCTTGAAGGTTTATTCATGGGAA 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 945 CCAGATGGTCAAACCCTTTTCTGTGGATTGGATGATGGCTTGAAGGTTTATTCATGGGAA 1004
Query 1033 CCAGTGATTTGCCGGGACGGTGTTGATATGGGATGGTCAACACTTGGTGACTTCTGCATC 1092
||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1005 CCAGTGATTTGCCGGGATGGTGTTGATATGGGATGGTCAACCCTTGGTGACTTCTGCATC 1064
Query 1093 AACGAAGGAAAGTTTATTGGTTGCTCATATTACCGAAATTCTGTTGGGATATGGGTTTCA 1152
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1065 AACGAAGGAAAGTTCATTGGTTGTTCATATTACCGAAATTCTGTTGGGATATGGGTTTCA 1124
Query 1153 GATATATCGGAACTTGAGCCATATGGAGCAGTATCTGAGGATAAGAATGAATGCATGGTG 1212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1125 GATATATCGGAACTTGAGCCATATGGAGCAGTATCTGAGGATAAGAATGAATGCATGCTG 1184
Query 1213 AAAAGATTTAGTGTCTTGAATGATCAGTCTGAGAGAATGGGAAGTGGCCCAAGGGGCAGC 1272
|||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct 1185 AAAAGATTCAGTGTCTTCAATGATCAGTCTGAGAGAGTGGGAAGTGGCCCAAGGGGCAGT 1244
Query 1273 GTATCCCCAGATTATGAGACAAGAGAGATAAAGAACATATACGTCGACTCCACAGGTGGA 1332
|||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1245 GTATCCCCAGATAATGAGACAAAAGAGATAAAGAACATATACGTTGACTCCACAGGTGGA 1304
Query 1333 AATTTGAATGTAGCGCAAAATCCAGGATCTCTGAAAGCGACATTGCCTTTGGAATCAGGA 1392
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1305 AATTCGAATGTAGCGCAAAATCCAGGATCTCTGAAAGCGACATTGCCTTTGGAATCAGGA 1364
Query 1393 AAAGTAGCTACTATGGTGAGCGAGAAGCAGAATGCAGCATATTTTGGACCAGCAGGAGAC 1452
|||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||
Sbjct 1365 AAAGTAGCTACTATGGCGAGCGAGAAGCAGAATGCAACATATTTTGGACAAGCAGGAGAT 1424
Query 1453 AAGTATTC---TA-G--TA------CATCGCGGGATAGTGATAGTGGAGAGGAATCTTCT 1500
|||||||| || | || |||||||||||||||||||||||||||||||||||
Sbjct 1425 AAGTATTCTAGTATGCATACTGTTGCATCGCGGGATAGTGATAGTGGAGAGGAATCTTCT 1484
Query 1501 TATTCAGAAAGGGAATCTATCCCTTTCTCAAGAACGAAATCGGGCATGTTGCTAAGACCA 1560
||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||
Sbjct 1485 TATTCAGAAAGGGAATCTATCACTTTCTCAAGAACTAAATCGGGTATGTTGCTAAGACCA 1544
Query 1561 GCACATGTAAGAAAGACGCTAGCAAAGTTTGAAGAATCAAAACAGTCAGCGGTTGTTCAA 1620
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1545 GCTCATGTAAGAAAGACGCTAGCAAAGTTTGAAGAATCAAAACAGTCAGCGGTTGTTCAA 1604
Query 1621 TCTGCAACTCGAAAGAAAAGCGGATTGGCTGTTGAGGAGGAACCACAAACTCAAAACGCG 1680
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1605 TCTGCATCTCGGAAGAAAAGCGGATTGGCTGTTGAGGAGGAACCACAAACTCAAAATGTA 1664
Query 1681 TTTCTTTCAGAACAGAATGCTAGTAAACCTTTTGATGCTGAAGATTCTATCATCAAGGGT 1740
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1665 CTTCTTTCAGAACAGAATGGTAGTAAACCTTTTGATGCTGAAGATTCTACCATCAAGGGT 1724
Query 1741 ATTACTA-ACAAGTTTGAAAAAGCTTTATCATCGGAACCACCAACTGATGAAGCGAATCG 1799
||||| | ||||||||||||||| |||||||||||||||||| ||||||||| |||||||
Sbjct 1725 ATTAC-AGACAAGTTTGAAAAAGGTTTATCATCGGAACCACCGACTGATGAAACGAATCG 1783
Query 1800 TATGTTCCTTAAACCACCTCGTATCCATAGGTCATCAAATAGCAAGTACAATGACACAAG 1859
|||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct 1784 TATGTTCCTTAAACCACCTCGTGTCCATAGGTCATCAAATAGCAAGTACAATGACTTAAA 1843
Query 1860 ACGAGCAATGTCTGCTGATCCGGCAACTTTTGGCAAAGGTGGGATGGAGAACTCAGGAGA 1919
| ||| |||||| |||||| | |||||||||| |||||||||||||||| ||||||||||
Sbjct 1844 AAGAGTAATGTCCGCTGATTCTGCAACTTTTGACAAAGGTGGGATGGAGTACTCAGGAGA 1903
Query 1920 CGTAGAGGATATTCCCAGCAAAACTGAAAGAGTTCTTTCACGAGAAAAACCTGGCGATGA 1979
||||||||||||| |||||||||||||||||||||||||| |||||||||||| |||||
Sbjct 1904 CGTAGAGGATATTTGCAGCAAAACTGAAAGAGTTCTTTCACCAGAAAAACCTGGTGATGA 1963
Query 1980 ACAGAAAAACACTGAGTACCCTAGCGGCAGCAGAGAATTGAACCCTGTGAAGATTGTTGA 2039
||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1964 ACAGAAAAACACTGAATACCCTAGCAGCAGCAGAGAATTGAACCCTGTGAAGATTGTTAA 2023
Query 2040 AGGAGTAAATGTTGTCTCGGGGAGGACACGCTCCTTAGTTGAGAAGTTTGAGAGAGGAGA 2099
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2024 AGGAGTAAACGTTGTCTCGGGGAGGACACGCTCGTTAGTTGAGAAGTTTGAGAGAGGAGA 2083
Query 2100 AAAAACTACTCATACTGAAGGAGCCAGTACAACAATAGA-ACAGAACAATAATGCAGTGC 2158
||||| || |||||| |||| |||||||||||||||| | ||||||| |||||||||||
Sbjct 2084 AAAAATTATTCATACCGAAGCAGCCAGTACAACAATA-ACTCAGAACACTAATGCAGTGC 2142
Query 2159 AGGAAGATCCGCGTAAGACATCAAGACAGACAGGTGAAACTCCTGTCATATCAACACGAC 2218
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2143 TGGAAGATCCGCGTAAGACATCAAGACAGACAGGTGAAACTCCTGTCATATCAACACGAC 2202
Query 2219 GAGCTAGGAGTACTCCAGCCAGAGTGATGCCTATTGTTCTCAATCGGGATAGTAACGTGA 2278
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2203 GAGCTAGGAGTACCCCAGCCAGAGTGATGCCTATTGTTCTCAATCGGGATAGTAACATGA 2262
Query 2279 CATCTGATGAGCCTCCTTTAACACAACCAGCTAGGACTTCTTCATTTCCAGTGATGCCTG 2338
|||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct 2263 CATCTGATGAGCCTCCTTTAACACAACCAGCTAGGA---CTTCAGTTCCAGTGATGCCTG 2319
Query 2339 TGATACTCAATCAAGCTTCTAATGTCACATATGATGAGCCTTCTGTAGCGTTAACACAAG 2398
||||||||| ||||||| |||||||||||||||||||||| || || ||||||||||
Sbjct 2320 TGATACTCAGTCAAGCTACTAATGTCACATATGATGAGCC-TC-GT----TTAACACAAG 2373
Query 2399 AATCTAGAACTTCT-CATGCCCGTATATTGCCTGTGACATTCAATCAGGCGACAAATATT 2457
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 2374 AATCTAGAACTTCTCCAT-CCCGTATATTGCCTGTGACATTCAATCAGGCGACAAATATT 2432
Query 2458 ACATCTGAGGAGGCTTCTGTAACATTAAGGCG-CCAACGCAGGAATTCTGCAGCACGAGT 2516
||||||||||||||||||||||||| |||||| || ||||||||||||||||||||||||
Sbjct 2433 ACATCTGAGGAGGCTTCTGTAACATCAAGGCGACC-ACGCAGGAATTCTGCAGCACGAGT 2491
Query 2517 AAGGCCTGTGTTACTCAGTCA-G--G-CA--ACATCTCATGAGTGTCCTGTAACATCAGT 2570
||||||||||| ||||||||| | | || |||||||||||||| || |||||||||||
Sbjct 2492 AAGGCCTGTGTCACTCAGTCAGGCAGACATGACATCTCATGAGTGCCCAGTAACATCAGT 2551
Query 2571 ACGTCCA-TTAAGGACTTCTCCAGCCCGTGTAATGCCCACGAAACTAAATCAATCTGTTA 2629
||||||| | ||||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct 2552 ACGTCCAGCT-AGGACTTCTCCTGCACGTGTAATGCCCACGAAACTAAATCAATCTGTTA 2610
Query 2630 ACATGACATCTGATACATCTCATATAGCATCCATGCACCGAGTTAGTCCAACACAAATGT 2689
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct 2611 ACATGACATCTGATACATCTCATATAGCATCCAGGCACCGCGTTAGTCCAACACAAATGT 2670
Query 2690 TGGCTACACCCACTGTGATTGATCAAGTGGCTGATATGACATTGGATGAGACACATGCAA 2749
|| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2671 TGACTACACCCACTGTCATTGATCAAGTGGCTGATATGACATTGGATGAGACACATGCAA 2730
Query 2750 CACAAATTCAACCAGCTTGCGATAACATGCCTCAGAAGGAAGAGCCGAATATATCTGATA 2809
||||||||||||||||||| |||||| |||| |||||||||||||||||||||||||| |
Sbjct 2731 CACAAATTCAACCAGCTTGTGATAACTTGCCCCAGAAGGAAGAGCCGAATATATCTGAGA 2790
Query 2810 GGGAAGATGATAGTGACATAACTGAAAATCTTATGCTAACCCATAACGAGTTCTTAAGCA 2869
||||||||||||||||||| ||||||||||| |||| ||| |||||| ||||||||| ||
Sbjct 2791 GGGAAGATGATAGTGACATCACTGAAAATCTAATGCAAACTCATAACAAGTTCTTAACCA 2850
Query 2870 CTCTTCAATCGAGGTTGACAAAGTTACAAATTGTAAGACATTTTTGGGAGCGTAGCGATG 2929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2851 CTCTTCAATCGAGGTTGACAAAGTTACAAATTGTAAGACATTTTTGGGAGCGTAGCGATG 2910
Query 2930 TTAAAGGCGCAATTGGGGCATTAAGAAAACTGACAGATCAGTCTGTTCAAGCAGATGTGA 2989
|||||||||| || |||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct 2911 TTAAAGGCGCGATCGGGGCATTGAGAAAGCTGACAGATCAGTCTGTTCAAGCAGATGTGA 2970
Query 2990 TCAGTATTCTAACTGAAAAAATAGAAATTCTCACATTGGATATGTTTTCTCAATTGGTCC 3049
||||||||||||| || |||||||| |||||||||||||||||||||||||| |||||||
Sbjct 2971 TCAGTATTCTAACCGACAAAATAGAGATTCTCACATTGGATATGTTTTCTCAGTTGGTCC 3030
Query 3050 CTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCGGTAAATGTCTCCTTGGATA 3109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3031 CTGTCCTCACAAGCTTATTGGGTAGCAGGACAGAGAGGCCGGTAAATGTCTCCTTGGATA 3090
Query 3110 TGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATACGCTCAACTGTTTCAGCTCCAC 3169
|||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 3091 TGCTCTTGAAGCTTGTAGCAGTGTTCGGTACAGTTATACGGTCAACTGTCTCAGCTCCAC 3150
Query 3170 GGATTGTCGGCGTTGATCTTCATGCAAATGAAAGGCTAGAAATTTGCCAAATTTGTTCTG 3229
|||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |
Sbjct 3151 GGATTGTCGGTGTTGATCTTCATGCAGATGAAAGGCTAGAAATTTGCCAAATTTGTTCAG 3210
Query 3230 CGGGACTGCACAAGATTCAAAGAATTCTTCCAGTTCTCGCAAGAAGAGGCGGTCTAATAA 3289
||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||
Sbjct 3211 CGGGATTGCACAAGATTCAAAGGATTCTTCCAGTTCTCGCAAGAAGAGGCGGTCTCATAA 3270
Query 3290 CAAGAAAGGCTCAAGAACTAAACCTAGTTCTTCAAGAACCATAGCGGCAAGCAAAACCAA 3349
||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||
Sbjct 3271 CAAGAAAGGCTCAAGAACTAAACCTAGTTCTTCAAGAACCATAGCCACAGGCAAAATCAA 3330
Query 3350 GAATTGATCATACAAGCGGTCCACAAGTTGTTGTAATGTACGTTGCAAAGAAGCGTCTTG 3409
||||||||||| | ||||||| ||||||||||| |||| ||||||||||| ||| |
Sbjct 3331 CAATTGATCATATATGCGGTCCGCAAGTTGTTGTGCTGTATATTGCAAAGAAG--TCT-G 3387
Query 3410 TGTCTCTCGAGTCCAATCTCACTAAGGTTTATATATCAGAGAGAA--AGGCAGAGTCTCT 3467
||||||| ||||||||||||||| |||||||||||| ||| | || |||||||| |
Sbjct 3388 TGTCTCTAGAGTCCAATCTCACTGAGGTTTATATAT-AGATTCATCTAG-CAGAGTCTTT 3445
Query 3468 TGCTGTGGGATCGAACTATATATTCTGGAAACTAATGGTTGTTGTAAATCAtttttttGG 3527
|||||||||||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct 3446 TGCTGTGGGATCGAACTATATAATCCGGAAACTAATGGGTGTTGTAAATCATTTTTTTGG 3505
Query 3528 CCT-ACGTAGCTTCAATTCTTGGTTTGTTGTTGTT---CCGTGGAACTGCAACTCATATT 3583
| | | |||||||||||||||| |||||||||||| |||||||||||| |||||||||
Sbjct 3506 C-TGA-GTAGCTTCAATTCTTGATTTGTTGTTGTTGTTCCGTGGAACTGCGACTCATATT 3563
Query 3584 GATTTAATTCCTAACTGATGTG-T----C-TTTGTGTAGTCTTTCTTATTTTGTCTACAA 3637
|||||||||||||||||||||| | | ||||||||||| ||||||||||||||||
Sbjct 3564 GATTTAATTCCTAACTGATGTGCTAATGCCTTTGTGTAGTC---CTTATTTTGTCTACAA 3620
Query 3638 TATCATTTT 3646
|||||||||
Sbjct 3621 TATCATTTT 3629
Score = 54.7 bits (29), Expect = 5e-06
Identities = 31/32 (97%), Gaps = 0/32 (0%)
Strand=Plus/Plus
Query 3781 TTCCACTTTTGGTAATTCGAAAAGATTATTCT 3812
|||||||||||||||||||||||||||| |||
Sbjct 3685 TTCCACTTTTGGTAATTCGAAAAGATTAGTCT 3716
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144047913805
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5