BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G12210.1
Length=2658
Score E
Sequences producing significant alignments: (Bits) Value
Ahg920055 jgi|Araly1|920055|scaffold_101336.1 4145 0.0
Ahg334514 jgi|Araly1|334514|fgenesh1_pg.C_scaffold_1001079 3049 0.0
Ahg312255 jgi|Araly1|312255|fgenesh1_pm.C_scaffold_1001035 641 0.0
Ahg320641 jgi|Araly1|320641|fgenesh1_pm.C_scaffold_4000698 222 9e-57
> Ahg920055 jgi|Araly1|920055|scaffold_101336.1
Length=2692
Score = 4145 bits (2244), Expect = 0.0
Identities = 2529/2666 (95%), Gaps = 22/2666 (1%)
Strand=Plus/Plus
Query 1 ATGGGCGGTTGTGTCTCGGTCTCGTTGTCATGTGATCGAGAAGTGAATCAGTTTTCACAG 60
||||| |||||| |||| |||||||||||||||||||||| |||||||||| |||| |||
Sbjct 21 ATGGGAGGTTGTATCTCTGTCTCGTTGTCATGTGATCGAGTAGTGAATCAGATTTCTCAG 80
Query 61 TGGTTATGTGTCAGTGGGAGTTATATCCAAAACCTATCTGAGAATCTGGCTTCCCTGCAG 120
|| |||||||||||||| | |||||| || ||||| ||||||||||||||||| ||||||
Sbjct 81 TGTTTATGTGTCAGTGGTAATTATATTCATAACCTCTCTGAGAATCTGGCTTCTCTGCAG 140
Query 121 AAAGCCATGGGAGTGCTCAACGCTAAGCGAGATGACGTGCAAGGAAGGATAAATAGAGAA 180
|||||||||||||||||||| ||||||||||||||||||||||||||| || ||||||||
Sbjct 141 AAAGCCATGGGAGTGCTCAAGGCTAAGCGAGATGACGTGCAAGGAAGGGTAGATAGAGAA 200
Query 181 GAGTTTACTGGGCATCGTAGAAGGCTTGCTCAAGTTCAGGTATGGCTTACACGTATCCAA 240
|||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
Sbjct 201 GAGTTTACTGGGCATCGTCGAAGGCTTGCTCAAGTCCAGGTATGGCTTACACGTATCCTA 260
Query 241 ACCATCGAAAACCAATTCAATGAT-TTGCTTAGCACTTGTAACGCTGAGATACAAAGGTT 299
|||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||
Sbjct 261 ACCATCGAAAACCAATTCAATGATCTT-CTTAGCACTTGTAACGCTGAGATTCAAAGGTT 319
Query 300 GTGTCTCTGTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGGAAAAGGGT 359
|||||||||||| ||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct 320 GTGTCTCTGTGGTTTTTGCTCTAAAAATATGAAAATGAGCTATCTTTATGGGAAAAGAGT 379
Query 360 TATTGTCTTATTGAGGGAGGTTGAGGGTCTTAGTTCTCAAGGAGTATTTGATATAGTGAC 419
|||||| || |||||||||||||||||||| || |||||||||| ||||||| | |||||
Sbjct 380 TATTGTGTTGTTGAGGGAGGTTGAGGGTCTCAGCTCTCAAGGAGAATTTGATGTGGTGAC 439
Query 420 TGAGGCAGCTCCTATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 479
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 440 TGAGGCAACTCCGATAGCTGAGGTTGAAGAGTTGCCTATTCAATCCACAATTGTTGGTCA 499
Query 480 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTTTGGATTGTGGG 539
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 500 GGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTCGGGATTGTGGG 559
Query 540 TCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 599
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 560 TCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGATCAACAATAAGTT 619
Query 600 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCGTGGTGTCTAAAAACGCAAC 659
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 620 TTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGTGTCTAAAAATGCAAC 679
Query 660 AGTACATAAGATTCAAAAAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAATTGGGA 719
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 680 AGTACATAAGATTCAAAGAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAAGTGGGA 739
Query 720 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAATT 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 740 CGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAGTT 799
Query 780 TGTGTTGTTGTTGGATGATATATGGGAGAAAGTGGAGTTAAAGGTGATTGGAGTCCCGTA 839
||| ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||||
Sbjct 800 TGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTTAAATGTGATTGGAGTCCCGTA 859
Query 840 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCATTCTAAGGAAGTTTGTGG 899
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 860 TCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCGTTCTAAGGAAGTTTGTGG 919
Query 900 ACGCATGGGGGTAGATAACCCGATGGAAATCAGTTGTCTGGACACTGGAAACGCTTGGGA 959
|||||||||||||||| ||||||||||| |||||||| | ||||| ||||||| |||||
Sbjct 920 ACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGTTTAGACACCAGAAACGCCTGGGA 979
Query 960 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 980 TTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAGCT 1039
Query 1020 AGCACGCAAAGTTTCGGAAAAATGTTGTGGTCTACCACTAGCACTGAATGT-CATTGGTG 1078
|||||||||||||||||||||||| ||||||||||||||||||||||||| | ||||||
Sbjct 1040 TGCACGCAAAGTTTCGGAAAAATGTCGTGGTCTACCACTAGCACTGAATGTTC-TTGGTG 1098
Query 1079 AGACCATGTCATTCAAGAGGACAATACAAGAATGGCGTCATGCAACTGAGGTTTTGACTT 1138
|||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct 1099 AGACCATGTCATGCAAGAGGACAATACAAGAATGGTGTCATGCAATTGAGGTTTTGACTT 1158
Query 1139 C-T--GCTACAGATTTTTCTGGCATGGAAGATGAAATTCTTCCAATTTTAAAATATAGCT 1195
| | |||||||||||||| || ||||||||||| ||||||||||||||||||||||||
Sbjct 1159 CATCTGCTACAGATTTTTCAGGAATGGAAGATGAGGTTCTTCCAATTTTAAAATATAGCT 1218
Query 1196 ATGATAGCTTGAATGGGGAGGATGCGAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1255
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1219 ATGATAGCTTGAATGGGGAGGATGCAAAGTCGTGTTTCCTATATTGCTCTCTATTTCCTG 1278
Query 1256 AAGATTTTGAAATCAGAAAAGAGATGCTTATTGAATACTGGATTTGTGAGGGATTCATAA 1315
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1279 AAGATTTTAAAATCAGAAAAGAGATGTTTATTGAATACTGGATTTGTGAGGGATTCATAG 1338
Query 1316 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1339 AAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCTTG 1398
Query 1376 TCCGTTCATCTTTATTGTTGGAGGGAGCAAAGGATAAAGATGTCGTGAGTATGCATGATA 1435
|||||||||||||||||||||||| | |||| || | | |||||||||||||||
Sbjct 1399 TCCGTTCATCTTTATTGTTGGAGG-AT-AAAG-ATT----T-T-GTGAGTATGCATGATG 1449
Query 1436 TGGTTCGTGAGATGGCTCTGTGGATATTTTCTGATCTTGGAAAGCATAAAGAGAGATGTA 1495
||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 1450 TGGTTCGTGAGATGGCTCTGTGGATATCATCTGATCTTGGAAAGCATAAAGAGCGATGTA 1509
Query 1496 TTGTGCAAGCCGGCATTGGATTAGATGAACTACCTGAAGTCGAGAACTGGAGAGCTGTGA 1555
||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||||
Sbjct 1510 TTGTGCAAGCCGGTGTTGGATTAGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGTGA 1569
Query 1556 AAAGGATGTCGCTAATGAATAACAATTTTGAAAAGATACT-TGGCAGTCCCGAATGCGTT 1614
|||||||||||||||||||||| ||||||||||| ||| | |||| ||||||||||||||
Sbjct 1570 AAAGGATGTCGCTAATGAATAATAATTTTGAAAACATA-TATGGCTGTCCCGAATGCGTT 1628
Query 1615 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGACATCTCAATGGAATTC 1674
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1629 GAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGTCATCTCAATGGAATTC 1688
Query 1675 TTTCGGTGTATGCCTAGTCTAGCTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1734
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1689 TTTCGGTGTATGCCTAGTCTAACTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTGAA 1748
Query 1735 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1794
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1749 CTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATAT 1808
Query 1795 ATAGAGCGACTACCTCATGGTTTACACGAGTTGAGAAAGCTAGTACATTTGAAACTGGAA 1854
|||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||||
Sbjct 1809 ATAGAGCGACTACCTCATGGTTTACAAAAGTTGAGAAAGTTAGTACATCTGAAACTGGAA 1868
Query 1855 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTG 1914
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1869 AGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACATTA 1928
Query 1915 AGACTAAGAGATTCAAAAACGACACTAGATACGGGGCTTATGAAAGAACTACAGCTCTTA 1974
||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||||
Sbjct 1929 AGACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCTTA 1988
Query 1975 GAACATTTAGAACTCATAACCACAGATATCTCGTCAGGTTTGGTTGGGGAATTGTTCTGT 2034
|||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | | |
Sbjct 1989 GAACATTTAGAACTCATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAATTGGTATAT 2048
Query 2035 TATCCCAGAGTTGGGAGATGTATTCAACACATTTATATTAGGGACCATTGGGAGC-GTCC 2093
||||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||||
Sbjct 2049 TATCCCAGAGTAGGGAGATGTATTCAACACATTTTTATTAGGGACCACTGGG-GCCGTCC 2107
Query 2094 GGAGGAATCCGTAGGAGTATTAGTTTTGCCAGCTATA-CATAATCTGTGTTACATCTCCA 2152
|||||||| ||||||||||||||||||||||||||| | |||||| |||||||||||||
Sbjct 2108 AGAGGAATCAGTAGGAGTATTAGTTTTGCCAGCTATAAC-TAATCTCTGTTACATCTCCA 2166
Query 2153 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGaaaaaaaaTCTAA 2212
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2167 TATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAACAAAAATCTAA 2226
Query 2213 CAAATCCCAACTTCTCAAACCTCTCTAATGTGCGAATAGAAGGGTGTGATGGTTTAAAGG 2272
||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2227 CAAGTCCCAACTTCTCAAACCTCTCTAATGTGCGTATAGAAGGGTGTGATGGTTTAAAGG 2286
Query 2273 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTGATCAATCTTCGCGTTTGGGGGTGTAAGC 2332
||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct 2287 ATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTAATCTTCGCGTTTGGGGGTGTAAGC 2346
Query 2333 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCAAGTGTTTTAGAAAAGGAGATTCTTC 2392
|||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||||
Sbjct 2347 ATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCGAGTGTTCTAGATAAGGAGATTCTTC 2406
Query 2393 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2407 CTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGTTGTCTGAGCTGAAGAGCATCTACT 2466
Query 2453 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2467 GGAATGCTCTGCCTTTTCAGCGTTTGAGATGTCTTGACATACTAAACAATTGTCCGAAGC 2526
Query 2513 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTCAAAGTTGAAGAATTTGTCATAAAAT 2572
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 2527 TGAGAAAGCTTCCGCTGGATTCTAAAAGTGTTGTAAAAGTTGAAGAATTTGTCATAAAAT 2586
Query 2573 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACAATACCGTT 2632
||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||||
Sbjct 2587 ACAAGGAGAAAAAATGGATAGAAAGAGTTGAATGGGAGGACGAAGCGACACGACAGCGTT 2646
Query 2633 TCTTACCTACTTGTAGGCTGCGTTGA 2658
|||||||| |||||||||||||||||
Sbjct 2647 TCTTACCTTCTTGTAGGCTGCGTTGA 2672
> Ahg334514 jgi|Araly1|334514|fgenesh1_pg.C_scaffold_1001079
Length=5556
Score = 3049 bits (1651), Expect = 0.0
Identities = 1859/1958 (95%), Gaps = 20/1958 (1%)
Strand=Plus/Plus
Query 478 CAGGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTTTGGATTGTG 537
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 217 CAGGATTCGATGCTCGACAAGGTATGGAACTGTCTAATGGAAGATAAAGTCGGGATTGTG 276
Query 538 GGTCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACGCAGATCAACAATAAG 597
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 277 GGTCTGTATGGTATGGGTGGAGTAGGAAAAACCACCCTTCTCACGCAGATCAACAATAAG 336
Query 598 TTTTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCGTGGTGTCTAAAAACGCA 657
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct 337 TTTTCTAAACTAGGTGGTGGATTTGATGTCGTGATATGGGTTGTGGTGTCTAAAAATGCA 396
Query 658 ACAGTACATAAGATTCAAAAAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAATTGG 717
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct 397 ACAGTACATAAGATTCAAAGAAGCATCGGGGAAAAACTAGGCCTTGTTGGGAAGAAGTGG 456
Query 718 GACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAA 777
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 457 GACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAGAAG 516
Query 778 TTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGGAGTTAAAGGTGATTGGAGTCCCG 837
||||| ||||||||||||||||||||||| |||||| | ||||| |||||||||||||||
Sbjct 517 TTTGTCTTGTTGTTGGATGATATATGGGAAAAAGTGAACTTAAATGTGATTGGAGTCCCG 576
Query 838 TATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCATTCTAAGGAAGTTTGT 897
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 577 TATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCGTTCTAAGGAAGTTTGT 636
Query 898 GGACGCATGGGGGTAGATAACCCGATGGAAATCAGTTGTCTGGACACTGGAAACGCTTGG 957
|||||||||||||||||| ||||||||||| |||||||| | ||||| ||||||| |||
Sbjct 637 GGACGCATGGGGGTAGATGACCCGATGGAAGTCAGTTGTTTAGACACCAGAAACGCCTGG 696
Query 958 GATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 697 GATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACATTCCCCAG 756
Query 1018 CTAGCACGCAAAGTTTCGGAAAAATGTTGTGGTCTACCACTAGCACTGAATG-TCATTGG 1076
|| |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||
Sbjct 757 CTTGCACGCAAAGTTTCGGAAAAATGTCGTGGTCTACCACTAGCACTGAATGTTC-TTGG 815
Query 1077 TGAGACCATGTCATTCAAGAGGACAATACAAGAATGGCGTCATGCAACTGAGGTTTTGAC 1136
|||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct 816 TGAGACCATGTCATGCAAGAGGACAATACAAGAATGGTGTCATGCAATTGAGGTTTTGAC 875
Query 1137 -T--TCTGCTACAGATTTTTCTGGCATGGAAGATGAAATTCTTCCAATTTTAAAATATAG 1193
| ||||||||||||||||| || ||||||||||| ||||||||||||||||||||||
Sbjct 876 TTCATCTGCTACAGATTTTTCAGGAATGGAAGATGAGGTTCTTCCAATTTTAAAATATAG 935
Query 1194 CTATGATAGCTTGAATGGGGAGGATGCGAAGTCGTGTTTCCTATATTGCTCTCTATTTCC 1253
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 936 CTATGATAGCTTGAATGGGGAGGATGCAAAGTCGTGTTTCCTATATTGCTCTCTATTTCC 995
Query 1254 TGAAGATTTTGAAATCAGAAAAGAGATGCTTATTGAATACTGGATTTGTGAGGGATTCAT 1313
|||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 996 TGAAGATTTTAAAATCAGAAAAGAGATGTTTATTGAATACTGGATTTGTGAGGGATTCAT 1055
Query 1314 AAAAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCT 1373
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1056 AGAAGAAAAGCAAGGTAGAGAAAAAGCATTCAACCAAGGTTATGATATACTCGGTACTCT 1115
Query 1374 TGTCCGTTCATCTTTATTGTTGGAGGGAGCAAAGGATAAAGATGTCGTGAGTATGCATGA 1433
||||||||||||||||||||| | | ||||||||||| | ||||||||||||||
Sbjct 1116 TGTCCGTTCATCTTTATTGTT-----G-G---AGGATAAAGATTTTGTGAGTATGCATGA 1166
Query 1434 TATGGTTCGTGAGATGGCTCTGTGGATATTTTCTGATCTTGGAAAGCATAAAGAGAGATG 1493
| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||
Sbjct 1167 TGTGGTTCGTGAGATGGCTCTGTGGATATCATCTGATCTTGGAAAGCATAAAGAGCGATG 1226
Query 1494 TATTGTGCAAGCCGGCATTGGATTAGATGAACTACCTGAAGTCGAGAACTGGAGAGCTGT 1553
||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||||
Sbjct 1227 TATTGTGCAAGCCGGTGTTGGATTAGATGAACTACCTGAAGTCAAGAATTGGAGAGCTGT 1286
Query 1554 GAAAAGGATGTCGCTAATGAATAACAATTTTGAAAAGATACT-TGGCAGTCCCGAATGCG 1612
|||||||||||||||||||||||| ||||||||||| ||| | |||| ||||||||||||
Sbjct 1287 GAAAAGGATGTCGCTAATGAATAATAATTTTGAAAACATA-TATGGCTGTCCCGAATGCG 1345
Query 1613 TTGAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGACATCTCAATGGAAT 1672
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1346 TTGAACTTATAACTCTGTTCCTTCAGAATAACTACAAGTTGGTAGTCATCTCAATGGAAT 1405
Query 1673 TCTTTCGGTGTATGCCTAGTCTAGCTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTG 1732
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1406 TCTTTCGGTGTATGCCTAGTCTAACTGTTTTGGATCTATCAGAAAATCACAGTCTTAGTG 1465
Query 1733 AACTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACAT 1792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1466 AACTGCCAGAAGAAATATCAGAGTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACAT 1525
Query 1793 ATATAGAGCGACTACCTCATGGTTTACACGAGTTGAGAAAGCTAGTACATTTGAAACTGG 1852
|||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct 1526 ATATAGAGCGACTACCTCATGGTTTACAAAAGTTGAGAAAGTTAGTACATCTGAAACTGG 1585
Query 1853 AAAGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACAT 1912
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1586 AAAGGACGAGGAGACTTGAGAGCATTTCAGGGATATCATATTTGTCAAGTTTGAGAACAT 1645
Query 1913 TGAGACTAAGAGATTCAAAAACGACACTAGATACGGGGCTTATGAAAGAACTACAGCTCT 1972
| ||||||||||||||||||||||||||||| ||| | || |||||||||||||||||||
Sbjct 1646 TAAGACTAAGAGATTCAAAAACGACACTAGAGACGAGCCTAATGAAAGAACTACAGCTCT 1705
Query 1973 TAGAACATTTAGAACTCATAACCACAGATATCTCGTCAGGTTTGGTTGGGGAATTGTTCT 2032
|||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| | |
Sbjct 1706 TAGAACATTTAGAACTCATAACCACAAATATCTCCTCAAGTTTGGTTGGGGAATTGGTAT 1765
Query 2033 GTTATCCCAGAGTTGGGAGATGTATTCAACACATTTATATTAGGGACCATTGGGAGC-GT 2091
|||||||||||| |||||||||||||||||||||| |||||||||||| |||| || ||
Sbjct 1766 ATTATCCCAGAGTAGGGAGATGTATTCAACACATTTTTATTAGGGACCACTGGG-GCCGT 1824
Query 2092 CCGGAGGAATCCGTAGGAGTATTAGTTTTGCCAGCTATA-CATAATCTGTGTTACATCTC 2150
|| |||||||| ||||||||||||||||||||||||||| | |||||| |||||||||||
Sbjct 1825 CCAGAGGAATCAGTAGGAGTATTAGTTTTGCCAGCTATAAC-TAATCTCTGTTACATCTC 1883
Query 2151 CATATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGaaaaaaaaTCT 2210
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1884 CATATGGAACTGTTGGATGTGGGAGATAATGATAGAGAAGACACCATGGAACAAAAATCT 1943
Query 2211 AACAAATCCCAACTTCTCAAACCTCTCTAATGTGCGAATAGAAGGGTGTGATGGTTTAAA 2270
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1944 AACAAGTCCCAACTTCTCAAACCTCTCTAATGTGCGTATAGAAGGGTGTGATGGTTTAAA 2003
Query 2271 GGATTTGACGTGGCTGCTGTTTGCTCCAAACCTGATCAATCTTCGCGTTTGGGGGTGTAA 2330
||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 2004 GGATTTGACGTGGCTGCTGTTTGCTCCAAACCTTATTAATCTTCGCGTTTGGGGGTGTAA 2063
Query 2331 GCATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCAAGTGTTTTAGAAAAGGAGATTCT 2390
|||||||||||||||||||||||||||||||||||| |||||| |||| |||||||||||
Sbjct 2064 GCATCTGGAGGATATAATAAGCAAAGAGAAAGCTGCGAGTGTTCTAGATAAGGAGATTCT 2123
Query 2391 TCCTTTCCAGAAACTAGAATGCCTGAACTTGTATCAGT 2428
|||||||||||||||||||||||||||||||||| |||
Sbjct 2124 TCCTTTCCAGAAACTAGAATGCCTGAACTTGTATAAGT 2161
Score = 765 bits (414), Expect = 0.0
Identities = 1090/1407 (77%), Gaps = 84/1407 (6%)
Strand=Plus/Plus
Query 656 CAACAGTACATAAGATTCAAAAAAG-CATCGGGGAAAAACTAGGCCTTGTTGGGAAGAAT 714
||||||| | |||||||| ||| || ||| | ||||| | ||||||| |||| | |
Sbjct 2633 CAACAGTCCGTAAGATTC-AAAGAGACATAGCAGAAAAGGTTGGCCTTGGGGGGATGGAG 2691
Query 715 TGGGACGAGAAAAACAAAAACCAGAGAGCCCTTGACATCCACAACGTTCTTAGGAGGAAG 774
|||| |||||||||| | ||||||| |||| ||||||||||||| || ||||||| || |
Sbjct 2692 TGGGGCGAGAAAAACGATAACCAGATAGCCGTTGACATCCACAATGTCCTTAGGA-GACG 2750
Query 775 -AAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGGAGTTAAAGGTGATTGGAGT 833
|||||||| |||||||||||||||||||||||||||||| | ||||| | | |||||||
Sbjct 2751 AAAATTTGTTTTGTTGTTGGATGATATATGGGAGAAAGTGAATTTAAAAGCGGTTGGAGT 2810
Query 834 CCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATTCACCACTCATTCTA-AGGAAG 892
||||||||| || ||| ||||||||||| ||||||||||| |||| |||| || | |
Sbjct 2811 CCCGTATCCAAGCAAAGATAACGGATGCAAGGTAGCATTCACTACTCGTTCTCGAG-ATG 2869
Query 893 TTTGTGGACGCATGGGGGTAGATAACCCGATGGAAATCAGTTGTCTGGACA-CTGGAA-A 950
| ||||| ||||||||||| ||| | ||||||||| | || ||||| ||| | ||| |
Sbjct 2870 TGTGTGGGCGCATGGGGGTTGATGATCCGATGGAAGTTAGCTGTCT--ACAACCCGAAGA 2927
Query 951 CGCTTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACACATTAGGAAGCCACCCAGACAT 1010
| ||||||||||| ||| || ||| ||| |||| ||| | ||||| |||||||||||
Sbjct 2928 ATCATGGGATTTGTTCCAAATGACAGTTGGGAAAAATACACTGGGAAGTCACCCAGACAT 2987
Query 1011 TCCCC-AGCTAGC-ACGCAAAGTTTC--GGAAAAATGTTGTGGTCTACCACTAGCACTGA 1066
|||| | || || | | ||||| | ||||| ||| |||| |||||| ||||||| |
Sbjct 2988 TCCCGGA-CTTGCTA-GAAAAGTCGCTAGGAAA--TGTCGTGGCCTACCATTAGCACTCA 3043
Query 1067 ATGTCATTGGTGAGACC-ATGTCATTCAAGAGGACAATACAAGAATGG-CGTCATGCAAC 1124
|||| || ||||| | | ||| ||| ||| || ||| |||| |||||| | |||||| |
Sbjct 3044 ATGTTATCGGTGA-AGCTATGGCATGCAAAAGAACAGTACATGAATGGTC-TCATGCCAT 3101
Query 1125 TGAGGTTTTGAC-T--TCTGCTACAGATTTTTCTGGCATGGAAGATGAAATTCTTCCAA- 1180
||| |||||||| | ||||| ||||||||||| || ||||||||||||||||| |||
Sbjct 3102 TGACGTTTTGACATCATCTGCCACAGATTTTTCAGGTATGGAAGATGAAATTCT-CCATG 3160
Query 1181 TTTTAAAATATAGCTATGATAGCTTGAATGGGGAG--GATGCGAAGTCGTGTTTCCTATA 1238
|||| || ||||||||||||| || ||||||||| |||| || || || ||||| ||
Sbjct 3161 TTTTGAAGTATAGCTATGATAATTTAAATGGGGAGCTGATGA-AA-TCCTGCTTCCTGTA 3218
Query 1239 TTGCTCTCTATTTCCTGAAGATTTTGAAATCAGA-AAAGAGATGCTTATT-GAATACTGG 1296
||||||||| ||||||||||||| | || || |||||| | || | || ||||||
Sbjct 3219 TTGCTCTCTGTTTCCTGAAGATTATCTTATT-GATAAAGAGGGG-TTGGTAGACTACTGG 3276
Query 1297 ATTTGTGAGGGATTCATAAAAGAAAA-GCAAGGTAGAGAAAA-AGCATTCAACCAAGGTT 1354
|| ||||||||||| ||||| ||||| | |||| ||||| | | || | ||||||||||
Sbjct 3277 ATATGTGAGGGATTTATAAATGAAAAAG-AAGGCAGAGAGAGGA-CACTAAACCAAGGTT 3334
Query 1355 ATGATATACTCGGTACTCTTGTCCGTTCATCTTTATTGTTGGAGGGAGCAAAGGAT-AAA 1413
|||| ||| | ||||| ||||||||| ||| ||| ||| |||||| || |||||| |||
Sbjct 3335 ATGAGATAATTGGTACCCTTGTCCGTGCATGTTTGTTGATGGAGGAAG-AAAGGAACAAA 3393
Query 1414 G-ATGTCGTGAGTATGCATGATATGGTTCGTGAGATGGCTCTGTGGATATTTTCTGATCT 1472
| | || | ||||||||| ||||||||||||||||||| ||||||| || |||||
Sbjct 3394 TCAAAT-GTAAAAATGCATGATGTGGTTCGTGAGATGGCTCTATGGATATCATCCGATCT 3452
Query 1473 TGGAAAGCATAAAG-AGAGATGTATTGTGCAAGCCGGCATTGGATTA-GATGAACTACCT 1530
||| ||||| |||| ||| ||||||||||| ||| || |||| ||| | |||| ||||
Sbjct 3453 TGGGAAGCA-AAAGGAGAAATGTATTGTGCGAGCTGGTGTTGGGTTATG-TGAAGTACCA 3510
Query 1531 GAAGTCGAGAACTGGAG-AGCTGTGA-AAAGGATGTCGCTAATGAATAACAATTTTGAAA 1588
||||| || | |||| | |||| | |||| ||||| | |||||||| | |||||
Sbjct 3511 CAAGTCAAGGATTGGAACA-CTGTAAGAAAG-ATGTCTTTGATGAATAATGAGATTGAAG 3568
Query 1589 AGATACTTGGCAGTCCCGAATGCGTTGAACTTATAACTCTGTTCCTTCAGAATAACTACA 1648
||||| ||| ||||| ||| || | || ||||| |||||| || || || || ||| |||
Sbjct 3569 AGATATTTGACAGTCACGAGTGTGCTGCACTTACAACTCTATTTCTCCAAAAGAACGACA 3628
Query 1649 AGTTGGTAGACATCTCAA-TGGAATTCTTTCGGTGTATGCCT-AGTCTAGCTG-TTTTGG 1705
| |||| | ||||| || |||||||||| ||||||||| | ||| | || |||| |
Sbjct 3629 --T-GGTAAAGATCTCGGCTG-AATTCTTTCGATGTATGCCTCA-TCTGG-TGGTTTTAG 3682
Query 1706 ATCTATCAGAAAATCACAGTCTT-AGTGAACTGCCAGAAGAAATATCAGAGTTGGTGTCC 1764
|||||||||| || ||||||||| | |||| | ||||||||||||||||||||||| ||
Sbjct 3683 ATCTATCAGAGAACCACAGTCTTGA-TGAATTACCAGAAGAAATATCAGAGTTGGTCTCT 3741
Query 1765 TTGCAG-TATCTTGAT-TTGTCCGGGACATATATAGAGCGACTACCTCAT-GGTTTAC-- 1819
||| || ||| || | ||||| || | |||| | | |||||| | | ||||||
Sbjct 3742 TTG-AGATAT-TTCAACTTGTCATATACTTGTATACATCAACTACC-CGTAGGTTTATGG 3798
Query 1820 ACGAGTTGAGAAAGCTAGTACATTTGAAACTGGAA-AGGACGAGGAGACTTGAGAGCAT- 1877
|| | |||| ||||||| ||||| |||| || ||| | | ||| || |||| ||| ||
Sbjct 3799 AC-A-TTGAAAAAGCTAATACATCTGAATCTCGAACAC-ATGAGCAGTCTTGGGAGTATA 3855
Query 1878 TTCAGGGATATCATATTTGTC-AAGTTTGAGAACATTGAGACTAAGAGATTCAAAAAC-G 1935
|| |||||||||| |||||| || |||||| |||||| ||||| ||||||| ||| | |
Sbjct 3856 TT-AGGGATATCAAATTTGTGGAA-TTTGAGGACATTGGGACTACGAGATTCCAAA-CTG 3912
Query 1936 ACACTAGATACGGGGCTTA-TGAAAGAACTACAGCTCTTAGAACATTTAGAACTCATAAC 1994
||||||| | | || |||| || || ||||||||||||||| ||||| | | ||
Sbjct 3913 TTGCTAGATATGAGT-TTGGTGAAGGAGCTGCAGCTCTTAGAACATCTAGAAGTTGTGAC 3971
Query 1995 CAC-AGATATCTCGTCAGGTTTGGTTG 2020
| | |||||| || ||| |||||||||
Sbjct 3972 C-CTAGATATATCATCAAGTTTGGTTG 3997
> Ahg312255 jgi|Araly1|312255|fgenesh1_pm.C_scaffold_1001035
Length=5142
Score = 641 bits (347), Expect = 0.0
Identities = 823/1045 (79%), Gaps = 64/1045 (6%)
Strand=Plus/Plus
Query 1 ATGGGCGGTTGTGTCTCGGTCTCGTTGTCATGTGATCGAGAAGTGAATC-AGT-TTTCAC 58
||||| |||||| | | ||||||||||||||||||| || ||||||| | | | |||
Sbjct 2509 ATGGGAGGTTGTTTAACAGTCTCGTTGTCATGTGATCAAGTTGTGAATCAAATCTCTCA- 2567
Query 59 AGTGGTTATGTGTCAGTGGGA-GTTATATCCAAAACCTATCTGAGAATCTGGCT-TCCCT 116
|| | ||||| ||| | | | ||||| | || || || |||||||| | | | |
Sbjct 2568 AG-GTTTATGCATCAAT-GCAGGTTATGTTTGCAAGCTTTCCGAGAATCTAG-TGGCTAT 2624
Query 117 GCAGAAAGCCATGGGAGTGCTCAACGCT-AAGCGAGATGACGTGCAAGGAAGGATAAATA 175
| |||||| ||||| ||||||||| | | ||||||||||| |||||| ||||| || |||
Sbjct 2625 GAAGAAAGACATGGAAGTGCTCAA-GTTGAAGCGAGATGATGTGCAAAGAAGGGTAGATA 2683
Query 176 GAGAAGAGTTTACTGGGCATCGT-AGAAGGCTTGCTCAAGTTC-AGGTATGGCTTACACG 233
|||||||||| || ||| |||| | ||||||| ||||||| | ||| ||||| || |||
Sbjct 2684 GAGAAGAGTTCACAAGGCGTCGTCA-AAGGCTTTCTCAAGTCCAAGG-ATGGC-TA-ACG 2739
Query 234 --TATC-CAAACCATCGA--AAACCAATTCAATGATTTGCTTAGCACTTGTAACGCTGAG 288
| || | ||| |||| ||| |||||||||| |||||| |||| | ||| ||||
Sbjct 2740 AATGTCTC-GACCGTCGAGGAAA--AATTCAATGAACTGCTTATCACTAATGACGTTGAG 2796
Query 289 ATACAAAGGTTGTGTCTCTGT-GGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTA 347
| |||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 2797 CTTCAAAGGTTGTGTCTCT-TCGGATTTTGCTCTAAAAATGTGAAAATTAGCTATCTTTA 2855
Query 348 TGGGAAAAGGGTTATTGTCTTATTGAGGGAGGTTGAGGGTCTTAGTTCTCAAGGAGTA-T 406
||||||||||||| | | | |||| |||| ||||| |||||||||||||||||| | |
Sbjct 2856 TGGGAAAAGGGTTGTCATGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAG-ATT 2914
Query 407 TTGATATAGTGACTGAGG-CAGCTCCTATAGCTGAGG-TTGAAGAGTTGCCTATTCAATC 464
|||||| ||||||| || || ||| |||||| ||| |||||||| ||||||||||| |
Sbjct 2915 TTGATACGGTGACTGTGGCCA-ATCCGATAGCT-AGGATTGAAGAGATGCCTATTCAA-C 2971
Query 465 C-ACAATTGTTGGTCAGGATTCGATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGAT 522
| ||||| || |||||||| | |||||||| || |||||||| | |||| | || |||
Sbjct 2972 CTACAATCGTAGGTCAGGAAACAATGCTCGA-AAGGGTATGGACCCGTCTCACGGGAGAC 3030
Query 523 AAAGTTTGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACG 582
|| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 3031 GGAGACAAGATTGTGGGTCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACA 3090
Query 583 CAG-ATCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCG 640
| | |||||||| ||||||||| ||| | || | || |||| || ||||||||||| |
Sbjct 3091 C-GAATCAACAACAAGTTTTCTGAAA-AATGTAGCGGGTTTGGGGTTGTGATATGGGTTG 3148
Query 641 TGGTGTCTAAAA-ACGCA-ACAGTACATAAGATTCAAAAAAG-CATCGGGGAAAA-ACTA 696
|||||||||||| | || | | | | || ||||| || || |||| ||||||| ||||
Sbjct 3149 TGGTGTCTAAAAGTC-CAGATA-TCCGTAGGATTC-AAGGAGACATC-GGGAAAAGACTA 3204
Query 697 GGCCTTGTTGG-GAAGAATTGGGACGA-GAAAAACAAAAACCAGAGAGCCCTTGACATCC 754
| ||||| || |||| | ||||| | ||||| ||||| |||||||||||||||||
Sbjct 3205 GACCTTGGGGGCGAAG-AGTGGGATAATGAAAATGAAAAA-CAGAGAGCCCTTGACATAT 3262
Query 755 ACAACGTTCTTAGG-AGGAAGAAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTG 813
|||| || ||| || | || |||||||||||||||||||||||||||||||||||||||
Sbjct 3263 ACAATGTCCTTGGGAAACAA-AAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTG 3321
Query 814 GAGTTA-AAGGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATT 872
| ||| ||| | | |||||||| ||||| || | |||| |||||||||||||| ||
Sbjct 3322 AATTTAGAAGC-GCTCGGAGTCCCTTATCCAAGCAAACAAAATGGATGCAAAGTAGCCTT 3380
Query 873 CACCACTCATTCTA-AGGAAGTTTGTGGACGCATGGGGGTAGATAACCCGATGGAAATCA 931
||||||| ||||| || | |||||||| | |||||||| ||| ||||| | ||| |||
Sbjct 3381 TACCACTCGTTCTAGAG-ATGTTTGTGGGTGTATGGGGGTTGATGACCCGGTTGAAGTCA 3439
Query 932 GTTGTCTGGACACTGGA--AACGCTTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACAC 989
||||||| || || || || |||||| | |||| ||| |||||| || ||||||||
Sbjct 3440 GTTGTCTAGA-ACCCGACGAA-GCTTGGAAACTGTTCCAAATGAAAGTTGGAGAAAACAC 3497
Query 990 ATTAGGAAG-CCACCCAGACATTCC 1013
||| | ||| ||| |||||||||||
Sbjct 3498 ATT-GAAAGGCCATCCAGACATTCC 3521
> Ahg320641 jgi|Araly1|320641|fgenesh1_pm.C_scaffold_4000698
Length=2130
Score = 222 bits (120), Expect = 9e-57
Identities = 813/1126 (72%), Gaps = 133/1126 (12%)
Strand=Plus/Plus
Query 1586 AAAA-GATACT-TGGCAGTCCCGAATG-CGTTGAACTTATAACTCT-GTTCCTTCAGAA- 1640
|||| |||| | ||||| ||||| || | | |||||| |||||| || | ||| ||
Sbjct 1000 AAAATGATA-TCTGGCAACCCCGATTGTC-CTCAACTTACAACTCTCCTT-C-TCAAAAC 1055
Query 1641 TAACTACAAGTTGGTAGACATCTCAATG-GAATTCTTTCGGTGTATGCCTAGT-CTAGCT 1698
||||||||||||| | | || || | | ||||| ||| || |||||| | | |||| |
Sbjct 1056 AAACTACAAGTTGGAAAATATTTC-AGGTGAATTTTTTATGTCTATGCC-AATGCTAG-T 1112
Query 1699 -GTTTTGGATCTATC-A-GAAAATCACAGTCTTAG-TGAACTGCCAGAAGAAATATCAGA 1754
|| |||||||| || | | || | || | | | | ||| |||||||||||||||||||
Sbjct 1113 AGTCTTGGATCTGTCAATG-AACT-ACCG-CCTCGAAGAATTGCCAGAAGAAATATCAGA 1169
Query 1755 GTTGGTGTCCTTGCAGTATCTTGATTTGTCCGGGACATA-TATAGAGCGACTACCTCA-- 1811
|||||| |||||||||| |||||| ||||| ||| | |||||| ||||| |||
Sbjct 1170 GTTGGTCTCCTTGCAGTTTCTTGACTTGTCATACACA-AGTATAGATCGACT--GTCAGT 1226
Query 1812 TGGTTTACACGAGTTGAGAAAGCTAGTACATTTGAAA-CTGGAAAGGACGAGGAGACTTG 1870
||| |||| |||||| ||| ||| ||||| | ||| ||||| | | |||||||||
Sbjct 1227 TGGAATACAAAAGTTGAAAAAACTATTACATCT-AAATATGGAATCCATGTGGAGACTTG 1285
Query 1871 AGAGCATTTCA-GGGATATC-ATATTTGTCAAGTTTGAGAACATTGAGACTAAGAGATTC 1928
|||| |||| | |||||||| | ||||||| ||||||||| ||||| |||| || ||||
Sbjct 1286 AGAGTATTT-ACGGGATATCGA-ATTTGTCGAGTTTGAGATTATTGAAACTACGAAATTC 1343
Query 1929 AAAAAC-G-A-CACTAGAT-ACGGGGCTT-ATGA-AAGAACTACAGCTCTTAGAACATTT 1982
|| | | ||||| || |||| || | | || || || ||||| ||| || |
Sbjct 1344 ---CACGGTATTGGTAGATAAC--AGCTTAAT-AGAGGAGCTGCAACTCTTGGAATATCT 1397
Query 1983 AG-AACTCATAACC--ACAGATATCTCGTCAGGTTT-GG-TTG-GGGAATTGTTCTGTTA 2036
|| ||||| || || ||| ||| | | ||| |||| || ||| | || |||||| |
Sbjct 1398 AGAAACTCTTACCCTAACA-ATA-C-CATCAAGTTTGGGTTTGAAGAAACTGTTCTCTGC 1454
Query 2037 TCCCAGAGTTGG-GAGATGTATTCAACACATTTATATTAGGGACCATTGGGAGCGTCCGG 2095
|| || |||||| || ||| |||||| | | | ||| | | ||| || || ||
Sbjct 1455 TCACA-AGTTGGTGAAATGCATTCAAAAGGTATCTATAAAGAACC-TT--GA------GG 1504
Query 2096 AGGAATCCGT-AGGAGTATTAGT-TTTGCCAGCT-ATACATAATCTGTGTTACATCT--C 2150
| || | | | || ||||| | ||| |||| | || |||||||| || ||| |
Sbjct 1505 AAAAAACATTCAAGA-TATTA-TCTTTTCCAG-TCATGGATAATCTG-AATA-GTCTCGC 1559
Query 2151 CATATGGAACTGTTG-GATGTGGGAGATAATGATAGAGAAG--A-CACCATGGaaaaaaa 2206
||||||||| || || |||| |||||||| |||||||||| | || ||||||| ||||
Sbjct 1560 CATATGGAAGTG-TGACATGTTGGAGATAAAGATAGAGAAGTCACCATCATGGAACAAAA 1618
Query 2207 aTCTAACAAATCCCA-ACTTCTCAAACCTCTC-TA-ATGTGCGAATA-GAAGGGTGTGAT 2262
|| ||||| | || |||||| |||||||| || || || | ||| | || ||||
Sbjct 1619 GTCCAACAAGT-TCATGCTTCTCTAACCTCTCATATATATG-G-ATACG-AGAGTGTTCG 1674
Query 2263 GGTTTAAAGGATTTGACGTGGCTGCTGTTTGCTCCAAACCTGATCAATCTTCG-CGTTTG 2321
||| ||| ||||||||||||| || ||||||| |||||||| || ||| | | || ||
Sbjct 1675 GGTCTAAGGGATTTGACGTGGTTGTTGTTTGCACCAAACCTTATTGATC-T-GACGGTT- 1731
Query 2322 GGGGT-G-T-AA-GCATCTGGAGGATATAATAAGCAAAGAGAAAGCTG--CAAG-T-GTT 2373
|| | | | || | | || |||||||||||||||||||||||||||| |||| | |
Sbjct 1732 -GGTTCGATAAATG-AACTAGAGGATATAATAAGCAAAGAGAAAGCTGATCAAGCTAGAG 1789
Query 2374 TTAGAA-AAGG-AG-ATTCTTCCTTTCCAGAAACTAGAATGC-CTGAACTTGTATC-AGT 2428
||| |||| | ||| ||||||| || ||||| |||| | || |||| || | |
Sbjct 1790 A-AGAGCAAGGTAATATTATTCCTTTTCAAAAACTGGAAT-CTCTCTCCTTG-ATTGATT 1846
Query 2429 TGTCTGA-GCTGAAGAGCATCTACTGGAATGCTCTGCCTTTTC-AGCGT-TTGAGATGTC 2485
| || | | | || ||||||||||||| | |||| ||||||| | | | || ||| |
Sbjct 1847 TACCT-ACGTTAAAAAGCATCTACTGGAGTCCTCTACCTTTTCCATC-TCTTAAGA-GAA 1903
Query 2486 TTGACA-TACTAAACAATTGTCCGAAG-CTGAGAAAGCTTCCGCTGGATTCTAAAAGTGT 2543
| | | ||| ||| | | ||| ||| || |||| |||||| | || ||||||||||
Sbjct 1904 TCAA-AGTAC-AAA-AGT-GTC-GAAAACTTAGAAGGCTTCCATTCGACTCTAAAAGTGG 1958
Query 2544 TGTCAAAGTTGAAGAAT-TTGTCATAAAATACAAGGAGAAAA--AATGGATAGAAAGAGT 2600
||| || |||||| | |||||||||| ||| ||||| | ||||||||||||||||
Sbjct 1959 TGTTGTAGGTGAAGA-TCTTGTCATAAATTAC--GGAGAGGAGGAATGGATAGAAAGAGT 2015
Query 2601 TGAATGGGAGGACGAAGCGACACAATAC--CGTTTCTTACCTACTT 2644
| ||||||| |||||||| ||||| || ||||||||| || |||
Sbjct 2016 TAAATGGGAAGACGAAGC--CACAAGACTTCGTTTCTTATCTTCTT 2059
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 100253524840
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5