BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G12460.1 Length=3289 Score E Sequences producing significant alignments: (Bits) Value Ahg920084 jgi|Araly1|920084|scaffold_101365.1 4076 0.0 Ahg475059 jgi|Araly1|475059|fgenesh2_kg.2__189__AT1G62950.1 2012 0.0 > Ahg920084 jgi|Araly1|920084|scaffold_101365.1 Length=2691 Score = 4076 bits (2207), Expect = 0.0 Identities = 2532/2692 (94%), Gaps = 9/2692 (0%) Strand=Plus/Plus Query 434 GGATCCGTTTATGAGCTGAATATGAGAAAGGTTCATCTTTTTCTGGTTTTGGTTCATTTC 493 |||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||| Sbjct 2 GGATCCGTTTATGAGCTGAATATGAGAAAGATTCATCTTTTTCTTGTTTTGGTAAATTTC 61 Query 494 ATCTACATTTCAACTTCTCGCTCTGATTCCATCAGTGAACGAGACATTCTGCTTCAGTTC 553 |||||||||||| |||||| ||| | | |||| ||| ||||||||| ||||||||||| Sbjct 62 ATCTACATTTCATCTTCTCTCTCCCAGACAATCAATGAGCGAGACATTTTGCTTCAGTTC 121 Query 554 AAAGGCAGTATCAGTGACGATCCATACAACAGCTTGGCTTCTTGGGTTTCCGATGGTGAC 613 |||| |||||||||||||||||| |||||||| |||||||||||||| ||||| |||||| Sbjct 122 AAAGACAGTATCAGTGACGATCCGTACAACAGTTTGGCTTCTTGGGTCTCCGACGGTGAC 181 Query 614 CTCTGCAATAGCTTCAATGGAATCACTTGTAACCCACAAGGTTTCGTGGACAAAATCGTT 673 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 182 CTCTGCAATAGCTTCAATGGAGTCACTTGTAACCCACAAGGTTTCGTGGACAAAATCGTT 241 Query 674 CTGTGGAACACAAGTCTCGCCGGAACCTTAGCTCCGGGATTGTCAAATCTAAAGTTTATT 733 || |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| || Sbjct 242 CTTTGGAACACCAGTCTCGCCGGAACCCTAGCTCCGGGATTGTCAAATCTAAAGTTTGTT 301 Query 734 CGAGTTCTGAACTTGTTTGGCAACAGGTTTACAGGTAATTTACCGTTGGATTACTTC-AA 792 |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || || Sbjct 302 CGAGTTCTGACCTTGTTTGGCAACAGGTTTACAGGTAATTTACCGTTGGATTAC-TCAAA 360 Query 793 GTTGCAAACTTTGTGGACGATTAATGTTAGTTCCAATGCGTTGTCTGGTCCGATTCCGGA 852 ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| Sbjct 361 GTTGCAAACTTTGTGGACGATTAATGTTAGTTCCAATGCGTTGTCTGGTACGATCCCGGA 420 Query 853 GTTTATTAGTGAATTGTCTAGCTTAAGGTTTCTAGACTTGTCTAAAAATGGTTTCACCGG 912 |||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 421 GTTTATCGGTGAATTGTCTAGCTTAAGGTTTCTTGACTTGTCTAAAAATGGTTTCACCGG 480 Query 913 AGAGATTCCGGTTTCTCTGTTTAAGTTCTGTGACAAGACCAAATTTGTTTCACTGGCTCA 972 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||| Sbjct 481 AGAGATTCCGGTTTCTCTGTTTAAGTTCTGTGAGAAGACCAAATTTGTTTCACTGTCTCA 540 Query 973 TAACAATATCTTTGGATCAATCCCTGCTTCAATTGTAAACTGTAACAACCTCGTAGGATT 1032 ||||||| ||| |||||||||||||| | | || || ||||||||||||||||||||||| Sbjct 541 TAACAATCTCTCTGGATCAATCCCTGGTACGATCGTGAACTGTAACAACCTCGTAGGATT 600 Query 1033 TGATTTCTCTTACAATAATCTGAAGGGAGTGTTGCCGCCTAGGATTTGTGATATTCCTGT 1092 |||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| || Sbjct 601 TGATTTCTCTTATAATAATCTGAAGGGAGTGTTACCGCCTAGGATTTGTGATATTCCGGT 660 Query 1093 GCTTGAATATATCTCAGTGAGAAACAATTTGTTGTCTGGTGATGTCTCTGAGGAGATACA 1152 |||||| ||||||| |||||||||||||||||||||||||||||||| ||| |||||| | Sbjct 661 GCTTGAGTATATCTTAGTGAGAAACAATTTGTTGTCTGGTGATGTCTTTGACGAGATAAA 720 Query 1153 GAAATGTCAGAGGTTGATTCTTGTTGATTTAGGAAGCAATTTGTTTCATGGATTAGCGCC 1212 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| Sbjct 721 GAAATGTCAGAGGTTGATTCTTGTCGATTTCGGAAGCAATTTGTTTCATGGATTAGCGCC 780 Query 1213 TTTTGCGGTTCTTACGTTCAAGAACATAACTTATTTCAATGTCTCTTGGAACCGATTTGG 1272 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct 781 TTTTGAGGTCCTTACGTTCAAGAACATAACTTACTTCAATGTCTCTTGGAACCGGTTTGG 840 Query 1273 TGGTGAGATTGGAGAGATAGTTGATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTC 1332 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 841 TGGGGAGATTGGAGAGATAGTTGATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTC 900 Query 1333 GAATGAGTTAACCGGTAGGATTCCTACTGGTGTTATGGGTTGCAAAAGTCTCAAGCTTTT 1392 |||||||||||| |||||||| || | ||||||| ||||||||||||||||||||||||| Sbjct 901 GAATGAGTTAACTGGTAGGATCCCAAATGGTGTTGTGGGTTGCAAAAGTCTCAAGCTTTT 960 Query 1393 GGATTTGGAGTCTAACAAGCTGAATGGAAGTATCCCGGGAAGTATTGGGAAGATGGAGAG 1452 ||||||||||||||||||||||||||| |||||||| ||| |||| | ||||||||||| Sbjct 961 GGATTTGGAGTCTAACAAGCTGAATGGTAGTATCCCTGGAGGTATCGAGAAGATGGAGA- 1019 Query 1453 C-CTCTCAGTGATCAGATTAGGGAATAATTCTATAGATGGGGTGATACCAAGAGATATTG 1511 | ||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||| Sbjct 1020 CGCTCTCGGTGATCAGATTAGGCAATAATTCTATAGATGGGGAGATACCAAGAGAGATTG 1079 Query 1512 GAAGTTTGGAGTTTCTACAGGTTTTGAATCTGCATAATCTCAATCTCATTGGTGAAGTTC 1571 ||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||| Sbjct 1080 GAAGTTTGGAGTTTCTACAAGTTTTGAATCTGCATAACCTCAATCTCATTGGTGAAGTTC 1139 Query 1572 CAGAGGATATATCCAATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGGAATGATTTAG 1631 ||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 1140 CAGAGGATATATCTAATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGTAATAATTTAG 1199 Query 1632 AAGGAAAGATCTCTAAGAAGCTATTAAACTTAACAAACATAAAGATTCTTGATCTGCATC 1691 ||||| || || |||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1200 AAGGAGAGGTCCCTAAGAAGCTATTAAACTTAACAAACTTAGAGATTCTTGATCTGCATC 1259 Query 1692 GAAACCGTCTGAACGGAAGTATCCCACCTGAACTTGGAAACCTCTCCA-AAGTCCAGTTT 1750 |||||||||| || |||||||| ||||||||||||||||||||||||| || |||||||| Sbjct 1260 GAAACCGTCTCAATGGAAGTATTCCACCTGAACTTGGAAACCTCTCCAGAA-TCCAGTTT 1318 Query 1751 CTTGATCTTTCACAGAATTCGCTTTCAGGGCCAATCCCGTCTTCCCTCGGGAGTTTGAAT 1810 |||||||||||||||||||| |||||||| |||||||||||||||||| || |||| || Sbjct 1319 CTTGATCTTTCACAGAATTCACTTTCAGGTTCAATCCCGTCTTCCCTCGAGAATTTGCAT 1378 Query 1811 ACTCTAACGCATTTCAATGTCTCCTATAACAATCTCTCTGGTGTTATCCCTCCTGTTCCA 1870 | ||||| ||||||||||||||||| ||||||||||| ||| ||||||||||||||||| Sbjct 1379 GCACTAACACATTTCAATGTCTCCTACAACAATCTCTCCGGTATTATCCCTCCTGTTCCA 1438 Query 1871 ATGATACAAGCTTTTGGATCTTCTGCATTTTCGAACAACCCTTTCCTTTGCGGTGATCCT 1930 ||||||||||||| ||||||||||| ||||| ||||||||||||||||||||||||||| Sbjct 1439 GTGATACAAGCTTTCGGATCTTCTGCGTTTTCAAACAACCCTTTCCTTTGCGGTGATCCT 1498 Query 1931 CTTGTAACTCCCTGCAATTCACGTGGAGCTGCAGCAAAATCCAGAAATTCTGATGCTCTA 1990 |||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||| Sbjct 1499 CTTGTAACTCCCTGCAATTCTCGTGGGGCTGCAGCAAAATCCAGAAATTCTAATGCTCTA 1558 Query 1991 AGCATTTCGGTTATCATCGTTATTATTGCGGCTGCTGTCATCCTCTTTGGTGTCTGCATT 2050 ||||||||||||||||| |||||||||||||||||| | ||||||||||||||||| || Sbjct 1559 AGCATTTCGGTTATCATTGTTATTATTGCGGCTGCTATTATCCTCTTTGGTGTCTGTATA 1618 Query 2051 GTGCTTGCTTTGAACCTAAGAGCTCGTAAAAGGAGAAAAGATGAAGAAATACTTACAGTT 2110 |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 1619 GTGCTTGCTTTGAACCTAAGAGCTCGTAAAAGGAGAAAAGATGAGGAAATACTTACAGTG 1678 Query 2111 GAAACCACTCCACTGGCGTCTTCGATTGACTCTAGCGGTGTGATAATTGGAAAGCTTGTT 2170 ||||||||||| ||||||||||| ||||||||||||||||||||||| |||||||||||| Sbjct 1679 GAAACCACTCCTCTGGCGTCTTCAATTGACTCTAGCGGTGTGATAATCGGAAAGCTTGTT 1738 Query 2171 CTTTTCAGCAAGAATTTGCCTTCAAAGTATGAAGATTGGGAGGCAGGTACAAAAGCTTTG 2230 |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||| Sbjct 1739 CTTTTCAGCAAGAATTTGCCATCAAAATATGAAGATTGGGAGGCGGGTACAAAAGCTTTA 1798 Query 2231 CTCGACAAGGAAAATATAATCGGCATGGGATCGATTGGATCAGTCTATAGAGCATCTTTC 2290 |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 1799 CTCGACAAAGAAAATATAATTGGCATGGGGTCGATTGGATCAGTCTATAGAGCATCTTTC 1858 Query 2291 GAAGGAGGAGTTTCCATTGCAGTGAAGAAGCTTGAGACCTTAGGAAGAATCAGAAACCAA 2350 |||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||| Sbjct 1859 GAAGGAGGGGTTTCCATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGAATCAGAAACCAA 1918 Query 2351 GAAGAGTTTGAGCAAGAAATTGGACGGCTTGGAGGTTTGCAACATCCGAATCTGTCTTCT 2410 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 1919 GAAGAGTTTGAGCAAGAAATCGGACGGCTTGGAGGTTTGCAACATCCGAATCTGTCTTCT 1978 Query 2411 TTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTCTCTCTGAGTTTGTCCCTAAT 2470 ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||| Sbjct 1979 TTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTTTCTCTGAATTTGTCCCTAAC 2038 Query 2471 GGTAGCCTCTACGATAATCTACACCTAAGAATTTTCCCGGGAACCAGCTCAAGCTATGGG 2530 |||||||||||||||||||||||| ||||||||| ||| ||||||||||||||| ||||| Sbjct 2039 GGTAGCCTCTACGATAATCTACACTTAAGAATTTACCCTGGAACCAGCTCAAGCCATGGG 2098 Query 2531 AATACTGATTTGAATTGGCACAGAAGATTTCAGATTGCTTTAGGAACTGCAAAAGCGCTC 2590 ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||| Sbjct 2099 AATACCGATTTGAATTGGCACAGAAGATTTCAGATTGCTTTAGGAACCGCGAAAGCGCTC 2158 Query 2591 TCTTTCCTTCACAATGACTGTAAACCGGCGATTCTTCATCTCAATGTTAAGTCCACCAAC 2650 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 2159 TCTTTCCTACACAATGACTGTAAACCGGCAATTCTTCATCTCAATGTTAAGTCCACCAAC 2218 Query 2651 ATTCTTCTAGACGAAAGGTACGAGGCAAAGCTATCGGATTATGGGTTAGAAAAGTTTCTT 2710 ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 2219 ATTCTTCTAGACGAAAGATATGAGGCAAAGCTATCGGATTATGGGTTAGAAAAGTTTCTT 2278 Query 2711 CCGGTTATGGACAGCTTTGGTTTGACTAAGAAGTTCCACAACGCGGTTGGGTACATTGCT 2770 ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| Sbjct 2279 CCGGTTATGGACAGCTTCGGTTTGACCAAGAAGTTCCACAACGCGGTTGGGTACATTGCT 2338 Query 2771 CCAGAGTTAGCTCAGCAGAGTTTGAGAGCGAGTGAGAAATGCGATGTGTATAGTTACGGT 2830 |||||| ||||||||||||||||||||| ||||||||||||||| ||||||||||| ||| Sbjct 2339 CCAGAGCTAGCTCAGCAGAGTTTGAGAGTGAGTGAGAAATGCGACGTGTATAGTTATGGT 2398 Query 2831 GTGGTTCTTCTTGAGCTGGTTACAGGTAGAAAACCGGTGGAGTCTCCATCG-GAAAACCA 2889 || |||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| Sbjct 2399 GTAGTTCTTCTTGAGCTGGTTACAGGTAGAAAACCGGTGGAGTCTCCATCGAGAAA-CCA 2457 Query 2890 AGTCTTGATCTTGAGAGACTATGTGAGGGATTTGTTGGAGACTGGTTCAGCTTCTGATTG 2949 |||||||||||||||||| |||||||||||||||||||| |||||||| ||||||||||| Sbjct 2458 AGTCTTGATCTTGAGAGATTATGTGAGGGATTTGTTGGAAACTGGTTCGGCTTCTGATTG 2517 Query 2950 TTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAATGAGCTGATTCAAGTCATGAAGTTAGG 3009 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 2518 TTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAACGAGCTGATTCAAGTCATGAAGTTAGG 2577 Query 3010 ACTCCTTTGTACGTCCGAGAATCCACTGAAGAGACCGAGCATGGCTGAGGTTGTGCAGGT 3069 ||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||||| Sbjct 2578 ACTCCTTTGTACGTCAGAGAATCCACTGAAGAGACCGAGTATGGCTGCGGTTGTGCAGGT 2637 Query 3070 TCTTGAATCAATCAGAAATGGATTTGGATCATGATGAAGCTTTTTCCCtttt 3121 |||||||||||| |||||||||||||||||||||| ||||||||||| |||| Sbjct 2638 TCTTGAATCAATTAGAAATGGATTTGGATCATGATAAAGCTTTTTCC-TTTT 2688 > Ahg475059 jgi|Araly1|475059|fgenesh2_kg.2__189__AT1G62950.1 Length=2792 Score = 2012 bits (1089), Expect = 0.0 Identities = 2145/2641 (81%), Gaps = 128/2641 (5%) Strand=Plus/Plus Query 530 GAACGAGACATTCTGCTTCAGTTCAAAGGCAGTATCAGTGACGATCCATACAACAGCTTG 589 |||||||| ||||| ||||| |||| || || |||| || ||||| |||||||| || Sbjct 88 GAACGAGAGATTCTACTTCAATTCAGAGACAACATCAACGATGATCCGTACAACAGTTTA 147 Query 590 GCTTCTTGGGTTTCCGATGGTGACCTCTGCAATAGCTTCAATGGAATCA-CTTGTAACCC 648 ||||||||||| ||| ||||||| || || |||||||||||||| | | ||||||||| Sbjct 148 GCTTCTTGGGTCTCCAATGGTGATCTTTGTAATAGCTTCAATGGTGT-ATCTTGTAACCG 206 Query 649 ACAAGGTTTCGTGGACAAA-ATCGTTCTGTGGAACACAAGTCTCGCCGGAACCTTAGCTC 707 | |||| ||||| || ||| |||||||| |||||||||||||||||||||||| || | | Sbjct 207 AGAAGGATTCGTCGA-AAAGATCGTTCTTTGGAACACAAGTCTCGCCGGAACCCTAACGC 265 Query 708 CGGGATTGTCAAATCTAAAGTT-TATT-CGAGTTCTGAACT-TGTTTGGCAACAGGTTTA 764 ||| |||||| | | || || | || | ||| || ||| ||||||||||||| |||| Sbjct 266 CGGCATTGTCTGGT-TTAACTTCT-TTAAGGGTTTTG-ACTCTGTTTGGCAACAGTTTTA 322 Query 765 CAGGTAATTTACCGTTGGATTACTTC-AAGTTGCAAACTTTGTGGACGATTAATGTTAGT 823 ||||||| ||||||||||||||| || ||||| || ||||| |||| ||| ||||||||| Sbjct 323 CAGGTAAGTTACCGTTGGATTAC-TCAAAGTTACAGACTTTATGGAAGATCAATGTTAGT 381 Query 824 TCCAATGCGTTGTCTGGTCCGATTCCGGAGTTTATTAGTGAATTGTCTAGCTTAAGGTTT 883 |||||||| ||||||||| ||||||| || ||||| |||| ||| ||| |||||| || Sbjct 382 TCCAATGCATTGTCTGGTTCGATTCCTGAATTTATCGGTGATTTGCCTAATTTAAGG-TT 440 Query 884 C-TAGACTTGTCTAAAAATGGTTTCACCGGAGAGATTCCG-GTTTCTCTGTTTAAGTTCT 941 | | || ||||| |||||||||||| |||||||||||| | |||||||||||| |||| Sbjct 441 CTTGGATTTGTCGAAAAATGGTTTCTTTGGAGAGATTCCGAG-TTCTCTGTTTAAATTCT 499 Query 942 G-TGACAAGACCAAATTTGTTTCACTGGCTCATAACAATATCTTTGGATCAATCCCTGCT 1000 | | ||||||||| ||||||||| || ||||||||||| ||| ||||| ||||| | Sbjct 500 GCT-TCAAGACCAAGTTTGTTTCATTGTCTCATAACAATCTCTCAGGATCTATCCCGGAA 558 Query 1001 TCAATTGTAAACTGTAACAACCTCGTAGGATTTGATTTCTCTTACAATAATC-TGAAGGG 1059 ||||| |||||||||||||| ||| | || || ||||||||||||||| | | | | Sbjct 559 TCAATCGTAAACTGTAACAATCTCATCGGCTTCGATTTCTCTTACAAT-GGCAT-TACCG 616 Query 1060 AGTGTTGCCGCCTAGGATTTGTGATATTCCTGTGCTTGAATATATCTCAGTGAGAA-ACA 1118 || ||| |||| | || || |||||||| || ||||| | | | || || |||| | | Sbjct 617 -GT-TTGTTGCCTCGAATCTGCGATATTCCGGTTCTTGAGTTTGTATCCGTTAGAAGA-A 673 Query 1119 ATTTGTTGTCTGGTGATGTCTCTGAGGAGATACAGAAATGTC-AGAGGTTGATTCTTGTT 1177 || |||||||||||||||| | |||||||||| ||| || | |||| |||| | ||| Sbjct 674 ATGTGTTGTCTGGTGATGTGTTTGAGGAGATATTGAAGTG-CAAGAGATTGAGCCATGTG 732 Query 1178 GATTTAGGAAGCAATTTGTTTC-ATGGATTAGCGCCTTTTGCGGTTCTTACG-TTCAAGA 1235 ||| |||||||||| || |||| ||||| ||| | |||| | ||||||| | ||||||| Sbjct 733 GATATAGGAAGCAA-TTCTTTCGATGGAGTAGGGTCTTTCGAGGTTCTT-GGATTCAAGA 790 Query 1236 ACATAACTTATTTCAATGTCTCTTGG-AACCGATTTGGTGGTGAGATTGGAGAGATAGTT 1294 ||||||||||||||||||| || ||| ||||| ||| || |||||||| ||||| ||| Sbjct 791 ACATAACTTATTTCAATGTGTC-TGGAAACCGGTTTACCGGGGAGATTGGTGAGATTGTT 849 Query 1295 GATTGCAGTGAAAGTTTGGAGTTTTTGGATGCTTCGTCGAATGAGTTAACCGGTAGGAT- 1353 ||||| ||||||||||||||||||||||||||||| |||||||||||||| |||| || Sbjct 850 GATTGTAGTGAAAGTTTGGAGTTTTTGGATGCTTCTTCGAATGAGTTAACGGGTA--ATG 907 Query 1354 T-CCTA-CTGGTGTTATGGGTTGCAAAAGTCTCAAGCTTTTGGATTTGGAGTCTAACAAG 1411 | |||| | ||| | | || ||||||||||| ||||||||||| |||| || || ||| Sbjct 908 TACCTAGC-GGTATAACCGGATGCAAAAGTCTTAAGCTTTTGGACCTGGAATCGAATAAG 966 Query 1412 CTGAATGGAAGTATCCCGGGAAGTATTG-GGAAGATGGAGA-GCCTCTCAGTGATCAGAT 1469 || ||||| ||| | || | | |||| | |||||||||||| || |||| |||||||||| Sbjct 967 CTCAATGGGAGTGTACCTGCAGGTAT-GAGGAAGATGGAGAAGC-TCTCTGTGATCAGAT 1024 Query 1470 TAGG-GAATAA-TTCTATAGATGGGGTGATACCAAGAGATATTGGAAGT-TTGGAGTTTC 1526 |||| || ||| || |||||||||| |||||| || | |||| | ||| ||| || Sbjct 1025 TAGGCGA-TAACTT-TATAGATGGGAAGATACCGCTCGAGCTCGGAAATCTTG-AGTATC 1081 Query 1527 TACAGGTTTTGAATCTGCATAATCTCAATCTCATTGGTGAAGTTCCAGAGGATATATCCA 1586 |||||||||||||| |||||||||||||||||||||||||| | ||||||||| |||| | Sbjct 1082 TACAGGTTTTGAATTTGCATAATCTCAATCTCATTGGTGAAATACCAGAGGATTTATCAA 1141 Query 1587 ATTGCAGAGTACTTCTTGAACTAGATGTTTCAGGGAATGATTTAGAAGGAAAGATCTCTA 1646 |||||||| |||||||||||||||||||||| ||||||| |||||||||| ||||| ||| Sbjct 1142 ATTGCAGACTACTTCTTGAACTAGATGTTTCTGGGAATGCTTTAGAAGGAGAGATCCCTA 1201 Query 1647 AGAAGCTATTAAACTTAACAAACATAAAGATTCTTGATCTGCATCGAAACCGTCTGAACG 1706 |||| ||||| |||||||||||| || |||| |||||||||||||| ||||| | | | Sbjct 1202 AGAATCTATTGAACTTAACAAACTTAGAGATCCTTGATCTGCATCGGAACCGAATCAGTG 1261 Query 1707 GAAGTATCCCACCTGAA-CTTGGAAACCTCTCCA-AAGTCCAGTTTCTTGATCTTTCACA 1764 |||| || || ||| || ||||| |||||||| | || ||||||| || ||||||||| | Sbjct 1262 GAAGCATTCCGCCT-AATCTTGGGAACCTCTCGAGAA-TCCAGTTCCTCGATCTTTCAGA 1319 Query 1765 GAATTCGCTTTCAGGGCCAATCCCGTCTTCCCTCGGGAGTTTGAATACTCTAACGCATTT 1824 ||||| |||||| || || ||||||||||| ||| ||| |||||||| || || ||||| Sbjct 1320 GAATTTGCTTTCTGGTCCTATCCCGTCTTCTCTCAGGAATTTGAATAGACTGACACATTT 1379 Query 1825 CAATGTCTCCTATAACAATCTCTCTGGTGTTATCCCTCCTGTTCCAATGATACAAGCTTT 1884 |||||| || || ||||| ||||| || |||| ||| || ||| ||||||| Sbjct 1380 CAATGTTTCTTACAACAACCTCTCCGGCATTAT---TCCA-----AA-GATTCAAGCTTC 1430 Query 1885 TGGATCTTCTGCATTTTCGAACAACCCTTTCCTTTGCGGTGATCCTCTTGTAACTCCCTG 1944 ||| ||||| | ||||| |||||||||||||| |||||||||||||||| ||| || || Sbjct 1431 GGGAGCTTCTTCGTTTTCCAACAACCCTTTCCTCTGCGGTGATCCTCTTGAAACACCGTG 1490 Query 1945 CAATTCACGTG-GAGCTGCAGCAAAATCCAGAAATTCTGATGCTCTAAGCATTTCGGTTA 2003 |||| | | | || ||| | ||| ||| ||||| | | |||||||||| || |||| Sbjct 1491 CAATGCTC-TCAGAACTGGATCAAGATCAAGAAAAACCAAAGCTCTAAGCACCTCTGTTA 1549 Query 2004 TCATCGTTATTATTGCGGCTGCTGTC-ATCCTCTTTGGTGTCTG-CATTGTGCTTGCTTT 2061 |||| ||||| || || ||||||| | ||| | |||| |||| | | ||||||| ||| Sbjct 1550 TCATTGTTATCATCGCTGCTGCTG-CGATCTTGGCTGGTATCTGTC-TAGTGCTTGTTTT 1607 Query 2062 GAACCTAAGAGCTCGTAAAAGGA-G-AAAA-GA-TGAAGAA-A--TACTTACAGTTGA-A 2113 |||||| || ||||||||||| | | |||| | ||||||| | || | || |||| | Sbjct 1608 GAACCTTAGGGCTCGTAAAAG-ACGGAAAAAGCCTGAAGAAGAAATAGTCACTTTTGATA 1666 Query 2114 AC-CA-CTCC-ACT--GGCGTCTTCG-A-T-TGACTC-TAGCGGTGTGATAATT-GG-AA 2162 || || | || || |||||| || | | || | | | ||||| | | || || || Sbjct 1667 ACACAACACCCACACAGGCGTCAACGGAATCTGG-TAATGGTGGTGTAACA-TTCGGGAA 1724 Query 2163 AGCTTGTTCTTTTCAGCAAGAATTTGCCTTCAAAGTATGAAGATTGGGAGGCAGGTACAA 2222 | |||||||| |||||||||| |||||||||||||||||||||||||||||| ||||||| Sbjct 1725 A-CTTGTTCTATTCAGCAAGAGTTTGCCTTCAAAGTATGAAGATTGGGAGGCGGGTACAA 1783 Query 2223 AAGCTTTGCTCGACAAGGAAAATATAATCGGCATGGGATC-GATTGGA-TCAGTCTATAG 2280 |||| || ||||||||||| || || ||||| || ||||| | ||||| | || ||||| Sbjct 1784 AAGCATTACTCGACAAGGATAACATTATCGGTATTGGATCAG-TTGGAGTG-GTTTATAG 1841 Query 2281 AGCATCTTTCGAAGGAGGAGTTTCCATTGCAGTGAAGAAGCTTGAGAC-CTTAGGAAGAA 2339 ||||||||||||||| || ||||||||||||||||| ||||| ||||| || |||||||| Sbjct 1842 AGCATCTTTCGAAGGCGGGGTTTCCATTGCAGTGAAAAAGCTCGAGACTCT-AGGAAGAA 1900 Query 2340 TCAGAAACCAAGAAGAGTTTGAGCAAGAAATTGGACGGCTTGGAGGTTTGCAA--CATCC 2397 |||||| |||||||||||||||||||||||| ||| |||||||| |||| || || || Sbjct 1901 TCAGAAGCCAAGAAGAGTTTGAGCAAGAAATCGGAAGGCTTGGAAGTTT--AAGTCACCC 1958 Query 2398 GAATCT-GTCTTCTTTCCAAGGTTACTACTTTTCCTCAACAATGCAGTTGATTCTCTCTG 2456 |||||| | ||||||| |||||||||||||||||||| ||||||||||| ||||| |||| Sbjct 1959 GAATCTTG-CTTCTTTTCAAGGTTACTACTTTTCCTCGACAATGCAGTTAATTCTTTCTG 2017 Query 2457 AGTTTGTCCCTAATGGTAGCCTCTACGATAATCTACACCTAAGAATTT-TCCCGGGAACC 2515 | |||||| | || || ||||| || ||||||||||||| ||||| | || | |||| Sbjct 2018 AATTTGTCACAAACGGAAGCCTTTATGATAATCTACACCCGAGAATCTCTCATAG-AACC 2076 Query 2516 AGC--T--CA--AGCT---ATGGGAATACTGATTT-GAATTGGCACAGAAGATTTCAGAT 2565 ||| | || ||| |||| || || || || || |||||| |||||||| || || Sbjct 2077 AGCAGTAGCAGCAGCAGCCATGGAAACACCGAGTTAGA-TTGGCATAGAAGATTCCAAAT 2135 Query 2566 TGCTTTAGGAACTGCAAAAGCGCTCTCTTTCCTTCACAATGACTGTAAACCGGCGATTCT 2625 || ||||||||||||| ||||| ||||| |||||||| || |||||||| |||||||| Sbjct 2136 AGCAGTAGGAACTGCAAAGGCGCTTTCTTTTCTTCACAACGATTGTAAACCCGCGATTCT 2195 Query 2626 TCATCTCAATGTTAAGTCCACCAACATTCTTCTAGACGAAAGG-TACGAGGCAAAGCTAT 2684 |||||||||| | ||||| ||||||||||| || || ||| || |||||||||||||||| Sbjct 2196 TCATCTCAATATAAAGTCTACCAACATTCTCCTTGATGAA-GGATACGAGGCAAAGCTAT 2254 Query 2685 CGGATTATGGGTTAGAAAAGTTTCTTCCGGTTATGGACAGCTTTGGTTTGACTAAGAAGT 2744 | ||||| || || |||||||||||||||||| || ||||||| ||||| | ||||| Sbjct 2255 CAGATTACGGTTTGGAAAAGTTTCTTCCGGTTTTGAACAGCTTCAATTTGA--A-GAAGT 2311 Query 2745 TCCACAACGCGGTTGGGTACATTGCTCCAGAGTTAGCTCAGCAGAGTTTGAGAGCGAGTG 2804 ||||||| |||||||| ||||| ||||||||| |||||||| || |||||||| ||||| Sbjct 2312 TCCACAATGCGGTTGGATACATAGCTCCAGAGCTAGCTCAG-AG--TTTGAGAGTGAGTG 2368 Query 2805 AGAAATGCGATGTGTATAGTTACGGTGTGGTTCTTCTTGAGCTGGTTACAGGTAGAAAAC 2864 | ||||| ||||| ||||| |||||||| |||||||||||||| |||||||||||||||| Sbjct 2369 ATAAATGTGATGTTTATAGCTACGGTGTAGTTCTTCTTGAGCTTGTTACAGGTAGAAAAC 2428 Query 2865 CGGTGGAGTCTCCATCGGAAAACCAAGTCTTGATCTTGAGAGA-CTATGTGAGGGATTTG 2923 |||||||||| ||||| |||||| | || |||||||| || || | |||||||||||||| Sbjct 2429 CGGTGGAGTCGCCATCCGAAAACGAGGTTTTGATCTTAAGGGATC-ATGTGAGGGATTTG 2487 Query 2924 TTGGAGACTGGTTCAGCTTCTGATTGTTTTGACAGAAGGTTGAGAGAGTTTGAAGAGAAT 2983 |||||||| || || |||||||||||||||||||| || |||| | ||||||||||||| Sbjct 2488 TTGGAGACAGGGTCGGCTTCTGATTGTTTTGACAGTAGATTGATTGGGTTTGAAGAGAAT 2547 Query 2984 GAGCTGATTCAAGTCATGAAGTTAGGACTCCTTTGTACGTCCGAGAATCCACTGAAGAGA 3043 |||||||||||||| ||||| ||||| || ||||| ||| | ||||||||| |||||||| Sbjct 2548 GAGCTGATTCAAGTGATGAAATTAGGTCTGCTTTGCACGACAGAGAATCCATTGAAGAGA 2607 Query 3044 CCGAGCATGGCTGAGGTTGTGCAGGTTCTTGAATCAATCAGAAATGGATTTGGA-TCATG 3102 ||||||||||| |||||||||||||||||||||| |||||||||||| | ||| ||||| Sbjct 2608 CCGAGCATGGCAGAGGTTGTGCAGGTTCTTGAATTGATCAGAAATGGAAT-GGAATCATG 2666 Query 3103 A 3103 | Sbjct 2667 A 2667 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 124143803126 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5