BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G12920.1
Length=1656
Score E
Sequences producing significant alignments: (Bits) Value
Ahg920157 jgi|Araly1|920157|scaffold_101438.1 2285 0.0
Ahg484426 jgi|Araly1|484426|fgenesh2_kg.5__418__AT3G26618.1 1517 0.0
Ahg494831 jgi|Araly1|494831|fgenesh2_kg.8__647__AT5G47880.2 891 0.0
> Ahg920157 jgi|Araly1|920157|scaffold_101438.1
Length=1346
Score = 2285 bits (1237), Expect = 0.0
Identities = 1309/1345 (97%), Gaps = 0/1345 (0%)
Strand=Plus/Plus
Query 126 ACCTCGAGAGAAGCTAAAAATGGCAGAAGAAGCGGATACGAACATCGAGATCTGGAAGAT 185
|||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 2 ACCTCGAGAGAAGCAAAAAATGGCAGAAGAATCAGATACGAACATCGAGATCTGGAAGAT 61
Query 186 TAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAATGGAACGAGTATGATCTCTCT 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 62 TAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAATGGAACGAGTATGATCTCTCT 121
Query 246 TATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAAGATGCTTGGTGATGAATATGG 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 122 TATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAAGATGCTTGGTGATGAATATGG 181
Query 306 AACTGCTTCAAACATTAAGAGTCGAGTCAATCGTCAATCTGTTTTGTCTGCCATTACTTC 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 182 AACTGCTTCAAACATTAAGAGTCGAGTCAATCGTCAATCTGTTTTGTCTGCCATTACTTC 241
Query 366 TGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCTACTAATGGTCTTGTTCTCTATAC 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 242 TGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCTACTAATGGTCTTGTTCTCTATAC 301
Query 426 CGGCACCATTGTTAATGATGACGGTAAAGAGAAGAAGGTGACGTTTGATTTCGAGCCCTT 485
|||||| |||||||||||||| |||||||||||||| || || |||||||||||||||||
Sbjct 302 CGGCACTATTGTTAATGATGATGGTAAAGAGAAGAAAGTCACCTTTGATTTCGAGCCCTT 361
Query 486 TAGGCCGATTAATGCTTCCTTGTACCTTTGTGACAACAAGTTCCATACTGAGGCATTGAA 545
|||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 362 TAGGCCGATTAACGCTTCCTTGTACCTTTGTGACAACAAGTTCCATACCGAGGCATTGAA 421
Query 546 CGAGCTTCTTGAGTCTGATGACAAGTTTGGTTTCATTGTTATGGATGGTAATGGGACACT 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 422 CGAGCTTCTTGAGTCTGATGACAAGTTTGGTTTCATTGTTATGGATGGTAATGGGACACT 481
Query 606 GTTTGGAACTTTGAGTGGGAATACTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCC 665
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 482 GTTTGGTACTTTGAGTGGGAATACTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCC 541
Query 666 GAAGAAGCACGGAAGAGGAGGACAGTCTGCACTTCGTTTTGCCCGTCTTAGGATGGAGAA 725
|||||||||||| ||||||||||| ||||| ||||||||||| || ||||||||||||||
Sbjct 542 GAAGAAGCACGGTAGAGGAGGACAATCTGCGCTTCGTTTTGCTCGACTTAGGATGGAGAA 601
Query 726 GAGACACAATTATGTTAGGAAAACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGC 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 602 GAGACACAATTATGTTAGGAAAACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGC 661
Query 786 TACGAGTCAGCCTAATGTCTCTGGTCTGATCCTTGCTGGTTCAGCTGATTTCAAAACTGA 845
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 662 TACGAGTCAGCCTAATGTCTCTGGTCTGATCCTTGCTGGTTCAGCTGATTTTAAAACTGA 721
Query 846 GCTCAGTCAATCAGAGTTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTTGA 905
||||||||| || |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 722 GCTCAGTCAGTCTGAGTTGTTTGATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTCGA 781
Query 906 TGTTTCTTACGGAGGTGAAAACGGTTTCAACCAAGCGATTGAGCTGTCTGCTGAGATTCT 965
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 782 TGTTTCTTACGGAGGTGAAAACGGTTTCAACCAAGCTATTGAGCTGTCTGCTGAGATTCT 841
Query 966 ATCCAATGTGAAGTTCATACAGGAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAG 1025
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 842 ATCAAATGTGAAGTTCATACAGGAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAG 901
Query 1026 TCAAGATACCGGGAAATACGTTTTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGG 1085
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 902 TCAAGATACCGGGAAATACGTTTTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGG 961
Query 1086 TGCTATCGAAACCCTTATCGTGTGGGAGAATCTGGACATAAACAGGTATGAGCTAAAGAA 1145
|||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct 962 TGCTATCGAAACCCTTATCGTGTGGGAGAATCTGGATATAAACAGGTACGAGCTAAAGAA 1021
Query 1146 CAGTACGACAGGAGAAATGGTGGTGAAACACTTTGGGAAAGATCAAGAGTCTGATACAAG 1205
||| ||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct 1022 CAGCACGACAGGAGAAATGGTGGTGAAACACCTTGGGAAAGATCAAGAGTCAGATACAAG 1081
Query 1206 CAACTTCCATGATTCAGAGACTAACGCGGAGCTAGAAGTACAGGAGAAGATGCCTCTACT 1265
||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| ||
Sbjct 1082 CAACTTCCATGATTCAGAGACTAACGCCGAGCTAGAAGTCCAGGAGAAGATGCCTCTGCT 1141
Query 1266 CGAATGGTTTGCAAATGAGTACAAACGTTTCGGCTGCACTCTTGAGTTTGTGACTAACAA 1325
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 1142 AGAATGGTTTGCAAATGAGTACAAACGTTTCGGCTGCACACTTGAGTTTGTGACTAACAA 1201
Query 1326 ATCCCAAGAAGGGTCACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGTATGTTACGTTA 1385
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1202 ATCCCAAGAAGGGTCACAGTTTTGCAGAGGTTTTGGTGGGATTGGTGGGATGTTACGTTA 1261
Query 1386 CCAGCTTGACATGAGGACATTTGATGAGTTATCAGATACTGAAGTTTACGAAGATTCTGA 1445
||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 1262 CCAGCTTGACATGAGGACATTTGATGAGTTATCGGATACTGAAGTTTATGAAGATTCTGA 1321
Query 1446 TTAAAGTGGGAAAACTTTTGGTGAT 1470
|||||||||| ||||||||||||||
Sbjct 1322 TTAAAGTGGGTAAACTTTTGGTGAT 1346
> Ahg484426 jgi|Araly1|484426|fgenesh2_kg.5__418__AT3G26618.1
Length=1528
Score = 1517 bits (821), Expect = 0.0
Identities = 1148/1307 (88%), Gaps = 18/1307 (1%)
Strand=Plus/Plus
Query 152 AAGAAGCGGATACGAACATCGAGATCTGGAAGATTAAGAAACTAATCAAGGGACTTGAAT 211
||||| | |||| |||||||||||| |||||||||||||| |||||||| |||||||||
Sbjct 54 AAGAATCAGATAAGAACATCGAGATTTGGAAGATTAAGAAGCTAATCAAAGGACTTGAAA 113
Query 212 CAGCTAGAGGTAATGGAACGAGTATGATCTCTCTTATTATGCCTCCTCGTGATCAAGTAT 271
| ||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||
Sbjct 114 CCGCTAGAGGTAATGGAACAAGTATGATCTCTCTTATTATGCCTCCTAGAGATCAAGTAG 173
Query 272 CTCGTGTCACAAAGATGCTTGGTGATGAATATGGAACTGCTTCAAACATTAAGAGTCGAG 331
||||||| || |||||||||| ||||||||| ||||| || |||||||||||||||||||
Sbjct 174 CTCGTGTTACTAAGATGCTTGCTGATGAATACGGAACCGCCTCAAACATTAAGAGTCGAG 233
Query 332 TCAATCGTCAATCTGTTTTGTCTGCCATTACTTCTGCTCAACAAAGGTTGAAGCTTTACA 391
| ||||||||||||||||| ||||| |||||||||||||||||||| |||||||||||||
Sbjct 234 TGAATCGTCAATCTGTTTTATCTGCTATTACTTCTGCTCAACAAAGATTGAAGCTTTACA 293
Query 392 ACAAGGTTCCTACTAATGGTCTTGTTCTCTATACCGGCACCATTGTTAATGATGACGGTA 451
| || |||||| | |||||||||||||| ||||| || |||||||||| |||||| ||||
Sbjct 294 ATAAAGTTCCTCCAAATGGTCTTGTTCTGTATACTGGAACCATTGTTACTGATGATGGTA 353
Query 452 AAGAGAAGAAGGTGACGT-TTGATTTCGAGCCCTTTAGGCCGATTAATGCTTCCTTGTAC 510
|||||||||| ||||| | ||||||||||||| |||| |||||||||||||| |||||
Sbjct 354 AAGAGAAGAAAGTGAC-TATTGATTTCGAGCCTTTTAAACCGATTAATGCTTCGTTGTA- 411
Query 511 CTT-TGTGACAACAAGTTCCATACTGAGGCATTGAACGAGCTTCTT-GAGTCTGATGACA 568
|| |||||||| ||||| ||||| ||| | ||||| |||||| || ||||||||||| |
Sbjct 412 TTTGTGTGACAATAAGTTTCATACCGAGCCTTTGAATGAGCTT-TTGGAGTCTGATGATA 470
Query 569 AGTTTGGTTTCATTGTTATGGATGGTAATGGGACACTGTTTGGAACTTTGAGTGGGAATA 628
||||||||||||||||||||||||| ||||| || ||||||| ||||||||||||||||
Sbjct 471 AGTTTGGTTTCATTGTTATGGATGGAAATGGAACTTTGTTTGGTACTTTGAGTGGGAATA 530
Query 629 CTAGAGAGGTTCTTCATAAGTTTACTGTTGATCTCCCGAAGAAGCACGGAAGAGGAGGAC 688
| |||||||||||||| ||||| ||||||||||| || || |||||||||||||||||||
Sbjct 531 CAAGAGAGGTTCTTCACAAGTTCACTGTTGATCTTCCTAAAAAGCACGGAAGAGGAGGAC 590
Query 689 AGTCTGCACTT-CGTTTTGCCCGTCTTAGGATGGAGAAGAGACACAATTATGTTAGGAAA 747
| ||||| || || ||||| ||||||||||||||||||||||| || ||||| ||||||
Sbjct 591 AATCTGC-GTTGCGATTTGCTCGTCTTAGGATGGAGAAGAGACATAACTATGTGAGGAAA 649
Query 748 ACCGCTGAGCTTGCTACACAGTTTTACATCAATCCAGCTACGAGTCAGCCTAATGTCTCT 807
||||| |||||||| || ||||||||||| |||||||||||||||||||| |||||||||
Sbjct 650 ACCGCGGAGCTTGCCACTCAGTTTTACATTAATCCAGCTACGAGTCAGCCCAATGTCTCT 709
Query 808 GGTCTGATCCTTGCTGGTTCAGCTGATTTCAAAACTGAGCTCAGTCAATCAGAGTTGTTT 867
||||| || |||||||||||||| |||||||| |||||||| ||||||||||| |||||
Sbjct 710 GGTCTTATACTTGCTGGTTCAGCGGATTTCAAGACTGAGCTAAGTCAATCAGAACTGTTT 769
Query 868 GATCCTCGTCTTCAAGCTAAGATATTGAATGTTGTTGATGTTTCTTACGGAGGTGAAAAC 927
|||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct 770 GATCCTCGTCTTCAAGCTAAGATATTGAATGTGGTTGATGTTTCTTACGGAGGAGAGAAT 829
Query 928 GGTTTCAACCAAGCGATTGAGCTGTCTGCTGAGATTCTATCCAATGTGAAGTTCATACAG 987
|||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 830 GGTTTCAACCAAGCAATTGAGCTGTCTGCTGAGATTCTATCTAATGTGAAGTTCATACAG 889
Query 988 GAGAAGAAACTGATTGGGAAGTACTTTGAGGAGATAAGTCAAGATACCGGGAAATACGTT 1047
|| |||||| ||||||||||||||||||||||||| |||||||| || |||||||| |||
Sbjct 890 GAAAAGAAATTGATTGGGAAGTACTTTGAGGAGATCAGTCAAGACACTGGGAAATATGTT 949
Query 1048 TTCGGTGTGGAGGATACTCTAAAGGCTCTAGAAATGGGTGCTATCGAAACCCTTATCGTG 1107
|||||||| ||||||||| ||||||||||||||||||||||| | ||||| ||||| |||
Sbjct 950 TTCGGTGTTGAGGATACTTTAAAGGCTCTAGAAATGGGTGCTGTTGAAACTCTTATAGTG 1009
Query 1108 TGGGAGAATCTGGACATAAACAGGTATGAGCTAAAGAACAGTACGACAGGAGAAATGGTG 1167
||||||||||| || || || ||||||||| |||| |||| ||||| |||||||| |||
Sbjct 1010 TGGGAGAATCTAGATATCAATAGGTATGAGTTAAAAAACAACACGACCGGAGAAATTGTG 1069
Query 1168 GTGAAACACTTTGGGAAA-GATCAAGAGT-CTGATAC-AA-GCAACTTCCATGATTCAGA 1223
| || || ||||||||| ||||||||| | | || || |||| ||||||||| ||||
Sbjct 1070 ATTAAGCA-TTTGGGAAAAGATCAAGAGAAC--A-ACCAAAGCAATTTCCATGATGCAGA 1125
Query 1224 GACTAACGCGGAGCTAGAAGTACAGGAGAAGATGCCTCTACTCGAATGGTTTGCAAATGA 1283
||| || || ||| ||||||| ||||||||||||||||| || ||||||||||| || ||
Sbjct 1126 GACCAATGCAGAGTTAGAAGTTCAGGAGAAGATGCCTCTGCTTGAATGGTTTGCTAACGA 1185
Query 1284 GTACAAACGTTTCGGCTGCACTCTTGAGTTTGTGACTAACAAATCCCAAGAAGGGTCACA 1343
||| |||||||| || || || |||||||||||||||||||| ||||||||||| |||||
Sbjct 1186 GTATAAACGTTTTGGTTGTACACTTGAGTTTGTGACTAACAAGTCCCAAGAAGGATCACA 1245
Query 1344 GTTTTGCAGAGGTTTTGGTGGGATTGGTGGTAT-GTTACGTTACCAGCTTGACATGAGGA 1402
||||||||||| ||||| || || ||||| || ||| || ||||||||||| |||||||
Sbjct 1246 ATTTTGCAGAGGCTTTGGCGGAATCGGTGG-ATTGTTGCGATACCAGCTTGATATGAGGA 1304
Query 1403 CATTTGATGAGTTATCAGATACTGAAGTTTACGAAGATTCTGATTAA 1449
| |||||||| ||||| ||| || ||||| |||||||| ||||||
Sbjct 1305 CGTTTGATGAATTATCGGATGGGGATGTTTATGAAGATTCCGATTAA 1351
> Ahg494831 jgi|Araly1|494831|fgenesh2_kg.8__647__AT5G47880.2
Length=1711
Score = 891 bits (482), Expect = 0.0
Identities = 1007/1258 (80%), Gaps = 46/1258 (4%)
Strand=Plus/Plus
Query 165 GAACATCGAGATCTGGAAGATTAAGAAACTAATCAAGGGACTTGAATCAGCTAGAGGTAA 224
|||||| ||||| |||||||||||||| || ||||| |||||| | ||||| |||||
Sbjct 106 GAACATTGAGATATGGAAGATTAAGAAGCTGATCAAATCCCTTGAAGCTGCTAGGGGTAA 165
Query 225 TGGAACGAGTATGATCTCTCTTATTATGCCTCCTCGTGATCAAGTATCTCGTGTCACAAA 284
|||||| || |||||||||||||| |||||||| |||||||| || |||||||| || ||
Sbjct 166 TGGAACTAGCATGATCTCTCTTATCATGCCTCCACGTGATCAGGTCTCTCGTGTTACTAA 225
Query 285 GATGCTT-GGTGATGAATATGGAACTGCTTCAAACATTAAGAGTC-GAGTCAATCGTCAA 342
|||| || |||||||| ||||||||||| || ||||| ||||| | |||||||||| ||
Sbjct 226 GATG-TTGGGTGATGAGTATGGAACTGCGTCGAACATCAAGAG-CAGAGTCAATCGCCAG 283
Query 343 TCTGTTTTGTCTGCCATTACTTCTGCTCAACAAAGGTTGAAGCTTTACAACAAGGTTCCT 402
||||||||| |||||| || |||||||| |||||| |||| ||||| |||| ||| |||
Sbjct 284 TCTGTTTTGGGTGCCATAACATCTGCTCAGCAAAGGCTGAAACTTTATAACAGGGTCCCT 343
Query 403 ACTAATGGTCTTGTTCTCTATACCGGCACCATTGTTAATGATGACGGTAAAGAGAAGAAG 462
||||||||||||| || |||||||| |||||||| ||||| || ||||| |||||||||
Sbjct 344 CCTAATGGTCTTGTGCTATATACCGGAACCATTGTGAATGAGGAAGGTAAGGAGAAGAAG 403
Query 463 GTGACGT-TTGA-TTTCGAGCCCTTT-AGGCCGATTAATGCTTCCT-TGTACCTTTGTGA 518
|| || | |||| ||| ||| ||||| || || || ||||||| || | ||||| |||||
Sbjct 404 GTTAC-TATTGACTTT-GAG-CCTTTCAGACCCATCAATGCTT-CTCTCTACCTCTGTGA 459
Query 519 CAACAAGTTCCATACTGAGGCATTGAACGAGCTT-CTTGAGTCTGATGACAAGTTTGGTT 577
||||||||| ||||| || || ||||| || || || |||||||||||||||||||| |
Sbjct 460 CAACAAGTTTCATACGGAAGCTTTGAATGA-ATTGCTGGAGTCTGATGACAAGTTTGGCT 518
Query 578 TCATTGTTATGGATGGTAATGGGACACTGTTTGGAACTTTGAGTGGGAATACTAGAGAGG 637
||||||| |||||||| || ||||| || ||||||||| ||||||| ||||| | ||||
Sbjct 519 TCATTGTAATGGATGGAAACGGGACTCTCTTTGGAACTCTGAGTGGTAATACCCGTGAGG 578
Query 638 TTCTTCATAAGTT-TACTGTTGATCTCCCGAAGAAGCACGGAAGAGGAGGACAGTCTGCA 696
| ||||| ||||| | |||||||||| |||||||| |||||||||||||||||||||||
Sbjct 579 TGCTTCACAAGTTCT-CTGTTGATCTTCCGAAGAAACACGGAAGAGGAGGACAGTCTGCT 637
Query 697 CTTCGTTTTGCCCGTCTTAGGATGGAGAAGAGACACAATTATGTTAGGAAAACCGCTGAG 756
||||||||||||||||| | ||||||||| | ||||||||||| ||||| |||||||||
Sbjct 638 CTTCGTTTTGCCCGTCTCCGTATGGAGAAGCGTCACAATTATGTGAGGAAGACCGCTGAG 697
Query 757 CTTGCTACACAGTTTTACATCAATCCAGCTACGAGTCAGCCTAATGTCTCTGGTCTGATC 816
|| || || |||| ||||||||||| || || |||||||| ||||| ||||| || ||
Sbjct 698 CTCGCCACGCAGTACTACATCAATCCTGCAACAAGTCAGCCGAATGTGTCTGGGCTAATA 757
Query 817 CTTGCTGGTTCAGCTGATTTCAAAACTGAGCTCAGTCAATCAGAGT-TGTTTGATCCTCG 875
||||| |||||||| |||||||| |||||| | ||||| ||||| | |||||||||| ||
Sbjct 758 CTTGCCGGTTCAGCAGATTTCAAGACTGAGTTGAGTCAGTCAGA-TATGTTTGATCCCCG 816
Query 876 TCTTCAAGCTAAGATATTGAATGTTGTTGATGTTTCTTACGGAGGTGAAAACGGTTTCAA 935
|| || |||||| ||||||| || ||||| || || ||||| ||||| ||||||||
Sbjct 817 GCTGGGTGCGAAGATACTGAATGTCGTGGATGTATCGTATGGAGGAGAAAATGGTTTCAA 876
Query 936 CCAAGCGATTGAGCTGTCTGCTGAGATTCTATCCAATGTGAAGTTCATACAGGAGAAGAA 995
|| || ||||||||||| ||||| ||||| | |||||||||||||| || ||||||
Sbjct 877 TCAGGCTATTGAGCTGTCAGCTGAAATTCTGGCGAATGTGAAGTTCATCCAAGAGAAGCG 936
Query 996 ACTGATTGGGAAGTACTTTGAGGAGATAAGTCAAGATACCGGGAAATACGT-TTTCGGTG 1054
||||||||||||||||||||||||||||| || || || ||||| || || ||| ||||
Sbjct 937 TCTGATTGGGAAGTACTTTGAGGAGATAAGCCAGGACACAGGGAAGTATGTGTTT-GGTG 995
Query 1055 TGGAGGATAC-TCTAAAGGCTCTAGAAAT-GGGTGCTATCGAAACCCTTATCGTGTGGGA 1112
|||| ||||| | | || ||| | || | ||||||||| || || || || || |||||
Sbjct 996 TGGAAGATACAT-TGAATGCTTTGGAG-TCGGGTGCTATAGAGACGCTGATTGTATGGGA 1053
Query 1113 GAATCTGGACATAAACAGGTATGAGCTAAAGAACAGTACGACAGGAGAAA-TGGTGGTGA 1171
||||| || || ||||| |||| | | ||||||||| |||| || |||| || || | |
Sbjct 1054 AAATCTCGATATCAACAGATATGTGATGAAGAACAGTGCGACTGGTGAAACTG-TGATCA 1112
Query 1172 AACACTTTGGGA-AAG-ATCAAGA-GTCTGATACA-AGCAACTTCCATGATTCAGAGACT 1227
| ||| | | | ||| | || || | | | || || || ||| | | | || |||
Sbjct 1113 AGCACCT-GA-ACAAGGAACAGGAAGCCA-ACACGGAG-AATTTCAAAG-TA-AGCGAC- 1165
Query 1228 AACG-CG-GAGCTA-GAA-GTACAGGAGAAGATGCC-TCTACTCGAATGGTTTGCAAATG 1282
| || | | ||| | | || |||||||| || | | |||| || ||| | || || |
Sbjct 1166 AGCGACTTG-GCTTTGGATGTGGAGGAGAAGCTGTCGT-TACTGGAGTGGCTGGCGAACG 1223
Query 1283 AGTACAAACGTTTCGGCTGCACTCTTGAGTTTGTGACTAACAAATCCCAAGAAGGGTCAC 1342
|||||| ||||| || || | || ||||||||||| |||||||| || ||||| || |
Sbjct 1224 AGTACAGGCGTTTTGGTTGTGCGCTAGAGTTTGTGACGAACAAATCACAGGAAGGTTCTC 1283
Query 1343 AGTTTTGCAGAGGTTTTGGTGGGATTGGTGGTATG-TTACGTTACCAGCTTGACATGA 1399
||||||||||||| ||||| || || || || || || |||||||||||||||||||
Sbjct 1284 AGTTTTGCAGAGGGTTTGGAGGAATCGGAGGAATACTT-CGTTACCAGCTTGACATGA 1340
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 62087099350
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5