BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G13120.1
Length=2427
Score E
Sequences producing significant alignments: (Bits) Value
Ahg920182 jgi|Araly1|920182|scaffold_101463.1 2824 0.0
Ahg352353 jgi|Araly1|352353|fgenesh1_pg.C_scaffold_6002946 566 3e-160
Ahg908002 jgi|Araly1|908002|Al_scaffold_0002_1083 466 3e-130
> Ahg920182 jgi|Araly1|920182|scaffold_101463.1
Length=1885
Score = 2824 bits (1529), Expect = 0.0
Identities = 1744/1847 (94%), Gaps = 18/1847 (1%)
Strand=Plus/Plus
Query 441 GGGG-ATTGTTTTGGAACCTCCTTGTCCTAAAAGTGTTGATGGGATTAGCATTGATCCTG 499
|||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||
Sbjct 40 GGGGAATTGTTTTGGAACCTCCTTGTCCTAAAAGCGTTGATGGGATTAGCATTGACCCTG 99
Query 500 AGCCTAATTGGAATTTCGAGAGTTTGGTCGCTGAGATTGCTTCTGTTGAAAAGAAGCTCA 559
||||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |
Sbjct 100 AGCCTAATTGGAATTTCGATAGTTTGGTCGCTGAGATCGAGTCTGTTGAAAAGAAGCTTA 159
Query 560 ATGGCTTCTCAATGTATCCTCAGCCAATTACTAACACAACCTTACGGATGGGAAGGAG-A 618
||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||| |
Sbjct 160 ATGGCTTCTCAATGTTTCCTCAGCCAATTACTAACACTACCTTACGGGTGGGAAGGAGTA 219
Query 619 GGTGGAGGATTTGTAATGCATGTCTCagaagatgagatggagagtgacgaaggtgaagag 678
|||| |||||||| |||| ||| ||||| || |||||||||||||| | | || |||
Sbjct 220 -GTGGGGGATTTGTGATGCGTGTATCAGATGAAGAGATGGAGAGTGATG-A--TGTAGA- 274
Query 679 agtgatgatgaggaagaagaagaagatCATAGTCAAATCTGTACAGCGGGAAAACGTTTT 738
| || | || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 275 A--GA--A-GAAGAAGAAGAAGAAGATCATAGTCAAATCTGTACAGCGGGGAAACGTTTT 329
Query 739 GCCTGTGATGAGCTTTACTTGAGTGATGAATCTGATGAAGAGTTTGATCATGAACCTGAG 798
||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct 330 GCCTGTGATGAGCTTTATTTGAGTGATGAATCTGATGATGAGTTTGATCATGAACCTGAG 389
Query 799 TATATGATGAATAAGTTGGGTCTGGCTGAGAGTGCCCTATATGAGGTTATCAACGACCAC 858
||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||
Sbjct 390 TATATGATGAATAAGATGGGTTTGGCTGAGAGTGCCCTATATGAGGTTATTAACGACCAC 449
Query 859 CAAACCGAAATCAAGGACGACATTAGGAATCAAGTATCAGTTGTTGAAACAGAAATAATG 918
|||| |||||| ||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct 450 CAAAACGAAATTAAGGATGACATTAGGAATCAAGTATCAGTTGTTGAAACGGAAATAATG 509
Query 919 AATGAGATTGAAACGTCTCTCTCTGCCATAGCCCGGGTTGAAAAGTACAGTGAGACTCGG 978
||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct 510 AATGAGATTGAAACGTCTCGCTCTGCCATAGCCCGGGTTGAAAAGTACAGTGAAACTCGA 569
Query 979 AAAGAAGTTGAACGGAAACTTGATCTTCAATATCAGCGAAAAGTTGCTGAAGCACTTGAT 1038
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 AAAGAAGTTGAACGGAAACTTGATCTTCAATATCAGCGAAAAGTTGCTGAAGCACTTGAT 629
Query 1039 ACCCATCTGACTGCAGTCCAACGCGAACATAAAATTAAATCGCAAATagaagaaagaaag 1098
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 630 ACCCATCTGACTGCAGTCCAACGCGAACATAAAATTAAATCGCAAATAGAAGAAAGAAAG 689
Query 1099 ataaggagcgaggaagctcaggaggaggccaggaggaaggaaaggGCTCATCAAGAAGAG 1158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 690 ATAAGGAGCGAGGAAGCTCAGGAGGAGGCCAGGAGGAAGGAAAGGGCTCATCAAGAAGAG 749
Query 1159 AAAATACGTCAAGAAAAAGCTCGCGCAGAGGCTCAAATGCTAGCaaaaatcagagctgaa 1218
|||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||
Sbjct 750 AAAATACGTCAAGAAAAAGCTCACGCAGAGGCTGAAATGCTAGCAAAAATCAGAGCTGAA 809
Query 1219 gaagaaaagaaagaagttgagagaaaggcagccagagaagtagctgaaaaagaagtagca 1278
|||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct 810 GAAGAAAAGAAAGAAGTTGAGAGAAAGGCAGCCAAAGAAGTAGCCGAAAAAGAAGTAGCA 869
Query 1279 gaTCGCAAAGCTGCCGAACAAAAACTTGCGGAACAGAAGGCTGTGATAGAGAGTGTTACG 1338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 870 GATCGCAAAGCTGCCGAACAAAAACTTGCGGAACAGAAGGCTGTGATAGAGAGTGTTACG 929
Query 1339 GGGAGTTCAGCTACATCAAATGCTCAAGCTGGGGGTAATTCAATCCGAGCTGCAGAAAGT 1398
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
Sbjct 930 GGGAGTTCAGCTACATCAAATGCTCAAGCTGGGGGTAAATCAATCCGAGCTGCAGAAAAT 989
Query 1399 GCTTTGATATTGGAGAACCACAGATTGAAAAAGCTCGAAGAACTAGAAACAACGAACCAA 1458
|||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 990 GCTTTGGCATTGGAGAACCACAGATTGAAAAAGCTCGAAGAATTAGAAACAATGAACCAA 1049
Query 1459 TCGCTTAAGTCACGTTCAAATGAAAACTTTAGCAGTTTTGAGAAGCATATTGGAAGAGTG 1518
||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct 1050 TCGCTAAAGTCACGTTCAAATGAGAACTTTAGCAGTTTTGAAAAGCATATTGGAAGGGTG 1109
Query 1519 ATAAGGCAAATAAGTGGGACAAAGGATAGTGTAAGTGGGAAAATCAATGATATTGTGAAA 1578
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 1110 ATAAGGCAAATAAGTGGGACAAAGGATAGTGTAAGTGGGAAAATCAATGAAATTGTCAAA 1169
Query 1579 ATATTTAAAGACCCTCGTTGTCCGGTATCCATAAGTATTGCAGCTTTTGCAAAGAAGATG 1638
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1170 ATATTTAAAGACCCTCGTTGTCCGGTATCCATTAGTATTGCAGCTTTTGCAAAGAAGATG 1229
Query 1639 GTCACCACTAAGGAAAAACCAAACCCTTTTGCATGCAGCTATGTCATTGTTTACATCAAC 1698
|||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 1230 GTCACCACTAAGGAGAAACCAAACCCTTTTGCATCCAGCTATGTCATTGTTTACATCACC 1289
Query 1699 TCACAGTTTCCCCAAGTTATGGATATTCTTCTCGCGGAATTCCACAAAGCTTGCATTTAC 1758
|| |||||||| |||| ||||||||||||||| || ||||||||||||||||||||||||
Sbjct 1290 TCCCAGTTTCCACAAGCTATGGATATTCTTCTTGCTGAATTCCACAAAGCTTGCATTTAC 1349
Query 1759 ACTGTCCCAAAGCATATTGTAAACTCACAGTCAGCTTGGGATTCAGACGCATATGAACGC 1818
||||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct 1350 ACTGTTCCAAAGCATATTATAAACTCACAGTCAGCGTGGGATTCAGACGCATATGAACGC 1409
Query 1819 CTAGATTCTATAATGAGGCTCTACGGTGCACTTGTTCAGACCGATATCCGCGTTGGCAAT 1878
|||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct 1410 CTAGATTCTATAATGAGGCTCTACGGTGCACTTGTTCAGACCGATACCCGCGGTGGCAAT 1469
Query 1879 GCTACTAACGTTCATGGGATAGAACATGGATGGGCTTGGTTAGCCCGGTTCCTTAACAAA 1938
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct 1470 GCTACTAACGTTCATGGGATCGAACATGGATGGGCTTGGTTAGCCCGGTTTCTTAACAAA 1529
Query 1939 ATCCCAGCCAACAGAGCCACTGCGACAGCCTTGAACTCCTTTCTCCAGACGGCTGGGTTT 1998
||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 1530 ATCCCAGCCAACAGAGCCACTGCAACAGCCTTGAACTCCTTTCTCCAGACGGCAGGGTTT 1589
Query 1999 GGTCTTCATCAGAGGTACAAATCTCAGTTTCTGAAGGTTGTGAATGTTGTGAGAGAGCAT 2058
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1590 GGTCTTCATCAGCGGTACAAATCTCAGTTTGTGAAGGTTGTGAATGTTGTGAGAGAGCAT 1649
Query 2059 TTCTTGCAGAAATTGCGGGCGAAGAAGGACACGTCGGATCTACT-TGTGATCATAGCCGA 2117
||||||||||||||| |||||| |||||||||||||||||||| | |||||||||||||
Sbjct 1650 TTCTTGCAGAAATTGAAGGCGAAAAAGGACACGTCGGATCTACTAT-TGATCATAGCCGA 1708
Query 2118 AATCACAGCGTACTTAGATGACCGGATGTATCTCAAGGAACCTGAAGGAAGA-GCTATGA 2176
||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 1709 AATAACAGCGTACTTAGATGACCGGATGTATCTCAAGGAACCTGAAGGAAGAAG-TATGA 1767
Query 2177 AGACGACTAGTACCTTGTCCTCTGAACT-TACTGCTGAATTAAATCAGCCGAACTACAAT 2235
||||||| |||||||||||||| ||| | |||||||||| ||||||| | |||| |||||
Sbjct 1768 AGACGACGAGTACCTTGTCCTCGGAA-TATACTGCTGAAATAAATCAACAGAACGACAAT 1826
Query 2236 CAGAATTACCAGAGGAATGATTACAGAAACTACTATTGATTTGATGT 2282
||||||||| ||| ||| |||||||| ||||||||||||| ||||
Sbjct 1827 CAGAATTACAAGAATAATTATTACAGAGGCTACTATTGATTTTATGT 1873
> Ahg352353 jgi|Araly1|352353|fgenesh1_pg.C_scaffold_6002946
Length=1446
Score = 566 bits (306), Expect = 3e-160
Identities = 548/661 (83%), Gaps = 31/661 (5%)
Strand=Plus/Plus
Query 1398 TGCTTTGATATTGGAGAACCACAGATTGAAAAAGCTCGAAGAACTAGAAACAACGAACCA 1457
||||||| ||||||||| || |||||||| ||||| ||||| ||||| ||| ||||||
Sbjct 690 TGCTTTGGCATTGGAGAAGCATAGATTGAAGAAGCTTGAAGAGTTAGAAGCAATGAACCA 749
Query 1458 ATCGCTTAAGTCACGTTCAAATGAAAACTTTAGCAGTTTTGAGAAGCA-TATTGGAAGAG 1516
| ||| || ||||||| |||| | ||||||| |||||||| ||| | ||||||||| |
Sbjct 750 AGAGCTAAAATCACGTTTAAATCAGGACTTTAGGAGTTTTGA-AAGGAGTATTGGAAG-G 807
Query 1517 T-GATAAGGCAAATAAGTGGGACAAAGGATA--GTGTAAGTGGGAAAATCAATGATATTG 1573
| ||||||||| |||| |||| ||| |||| ||| | || ||||||||| || || |
Sbjct 808 TCGATAAGGCAGATAACTGGGGTAAAAGATACGGTG-GA-TGCGAAAATCAACGAAATCG 865
Query 1574 TGAAAATATTTAAAGACCCTCGTTGTCCGGTATCCATAAGTATTGCAGCTTTTGCAAAGA 1633
| ||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||||
Sbjct 866 TCAAAGTATTTAAAGATCCTCGTTGTCCTTTATCCATCAGTATTGCAGCTTTTGCAAAGA 925
Query 1634 AGATGGTCACCACTAAGGAAAAACCAAACCCTTTTGCATGCAGCTATGTCATTGTTTACA 1693
||||||| || | ||| | ||||||||||||||||||||| |||||| |||
Sbjct 926 GGATGGTCTCCTGT-AGG-----CAAAACCCTTTTGCATGCAGCTACATCATTGGTTATG 979
Query 1694 TCAAC-TC-ACAGTTTCCCCAAGTTATGGATATTCTTCTCGCGGAATTCCACAAAGCTTG 1751
|| || || | ||||||| |||| ||||||||||||||| || |||||||||||||||||
Sbjct 980 TC-ACTTCGA-AGTTTCCACAAGCTATGGATATTCTTCTTGCTGAATTCCACAAAGCTTG 1037
Query 1752 CATTTACACTGTCCCAAAGCAT-ATTGTAAACTCACAGTCAGCTTGGGATTCAGACGCAT 1810
|||||||||||||||||| ||| || ||||| ||| || | | ||||||| || ||||
Sbjct 1038 CATTTACACTGTCCCAAATCATGAT-GTAAATTCA--GT--G-T-GGGATTCCGAGGCAT 1090
Query 1811 ATGAACGCCTAGATTCTATAATGAGGCTCTACGGTGCACTTGTTCAGACCGATATCCGCG 1870
|||| ||||||||||||| ||||||||| |||||||||||||| ||||| ||||| || |
Sbjct 1091 ATGAGCGCCTAGATTCTACAATGAGGCTATACGGTGCACTTGTCCAGACTGATATTCGTG 1150
Query 1871 TTGGCAATGCTACTAACGTTCATGGGATAGAACATGGATGGGCTTGGTTAGCCCGGTTCC 1930
||| |||||||| ||| |||||||||||||||||||||||||||||||||| ||||||
Sbjct 1151 GTGGTAATGCTACCAACATTCATGGGATAGAACATGGATGGGCTTGGTTAGCTCGGTTCT 1210
Query 1931 TTAACAAAATCCCAGCCA--A-CAGAGCCACTGCGACAGCCTTGAACTCCTTTCTCCAGA 1987
||||||| ||| |||||| | || ||| || | |||||| || ||| |||||||||| |
Sbjct 1211 TTAACAACATCTCAGCCATCAACATAGCTACCGTGACAGCGTTAAACGCCTTTCTCCAAA 1270
Query 1988 CGGCTGGGTTTGGTCTTCATCAGA-GGTACAAATCTCAGTTTCTGAAGGTTGTGAATGTT 2046
|||| ||||||||||||||||| | ||||||||||||||||| |||| ||| |||| |||
Sbjct 1271 CGGCAGGGTTTGGTCTTCATCA-ACGGTACAAATCTCAGTTTGTGAAAGTTATGAACGTT 1329
Query 2047 G 2047
|
Sbjct 1330 G 1330
Score = 385 bits (208), Expect = 1e-105
Identities = 292/332 (88%), Gaps = 8/332 (2%)
Strand=Plus/Plus
Query 850 AACGACCACCAAACCGAAATC-AAGGACGACATTAGGAATCAAGTATCAGTTGTTGAAAC 908
||||||||||||||| ||| | ||||| || |||| |||||||||||||||||||||||
Sbjct 328 AACGACCACCAAACC-AAAACTAAGGAAGATATTAAGAATCAAGTATCAGTTGTTGAAA- 385
Query 909 A-GAAATAATGAATGAGATTGAAACGTCTCTCTCTGCCATAGCCCGGGTTGAAAAGTACA 967
| |||||||||||||||||||||||||||| |||||| |||| |||||||| ||||||
Sbjct 386 AGGAAATAATGAATGAGATTGAAACGTCTCGCTCTGCTTTAGCTCGGGTTGAGAAGTACC 445
Query 968 GTGAGACTCGGAAAGAAGTTGAACGGAAACTTGATCTTCAATATCAGCGAAAAGTTGCTG 1027
| || | ||| | |||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct 446 GCGAAAATCGTAGAGAAGTTGAACGGAGACTTGATCTTCAATATAAGCGAAAAGTTGCTG 505
Query 1028 AAGCACTTGATACCCATCTGACTGCAGTCCAACGCGAACATAAAATTAAATCGCAAATag 1087
||||||||||||| ||| ||| |||||||||||| |||||| | |||||||| |||||||
Sbjct 506 AAGCACTTGATACGCATATGAGTGCAGTCCAACGAGAACATGAGATTAAATCACAAATAG 565
Query 1088 aagaaagaa-agataaggagcgaggaagctcaggaggaggccaggaggaag-gaaaggGC 1145
||||||||| | |||||||| || || ||||||||||| |||| || | || ||||||||
Sbjct 566 AAGAAAGAATA-ATAAGGAGTGAAGAGGCTCAGGAGGAAGCCAAGAAG-AGAGAAAGGGC 623
Query 1146 TCATCAAGAAGAGAAAATACGTCAAGAAAAAG 1177
||||||||||||||||||||||||||||||
Sbjct 624 AAATCAAGAAGAGAAAATACGTCAAGAAAAAG 655
> Ahg908002 jgi|Araly1|908002|Al_scaffold_0002_1083
Length=1440
Score = 466 bits (252), Expect = 3e-130
Identities = 382/442 (86%), Gaps = 19/442 (4%)
Strand=Plus/Plus
Query 1557 GAAAATCAATGATATTGTGAAAATATTTAAAGACCC-TCGTTGTCCGGTATCCATAAGTA 1615
||||| ||| || ||||| ||||| ||||||||||| | |||||||| ||||||| || |
Sbjct 855 GAAAACCAACGAAATTGTCAAAATGTTTAAAGACCCAT-GTTGTCCGCTATCCATCAGCA 913
Query 1616 TTGCAGCTTTTGCAAAGAAGATGGTCACCACTAAGGAAAAACCAAACCCTTTTGCATGCA 1675
||||| |||||||||||||||||||| || |||| | | |||||| ||||||| ||
Sbjct 914 TTGCAACTTTTGCAAAGAAGATGGTCTCCTCTAA-G-----CAAAACCCATTTGCATACA 967
Query 1676 GCTATGTCATTGTTTACATCAAC-TCACAGTTTCCCCAAGTTATGGATATTCTTCTCGCG 1734
|||| |||||||||||| || || || |||||||| |||| ||||||||||||||| ||
Sbjct 968 GCTACGTCATTGTTTACGTC-ACATCGCAGTTTCCACAAGCTATGGATATTCTTCTTGCT 1026
Query 1735 GAATTCCACAAAGCTTGCATTTACACTGTCCCAAAGCATATTGT-AA---AC--TCACAG 1788
||||||| |||||||||||||||||| ||||||||||||||||| || || ||||||
Sbjct 1027 GAATTCCTCAAAGCTTGCATTTACACCGTCCCAAAGCATATTGTAAACTCACAGTCACAG 1086
Query 1789 TCAGCTTGGGATTCAGACGCATATGAACGCCTAGATTCTATAATGAGGCTCTACGGTGCA 1848
|||||||| |||||||| |||||||||||||||| || ||||||||||||||| ||||||
Sbjct 1087 TCAGCTTGTGATTCAGAAGCATATGAACGCCTAGGTTATATAATGAGGCTCTATGGTGCA 1146
Query 1849 CTTGTTCAGACCGATATCCGCGTTGGCAATGCTACTAACGTTCATGGGATAGAACATGGA 1908
||||| ||||||||||| || | |||||||||||||||| ||||||||||||||||||||
Sbjct 1147 CTTGTCCAGACCGATATTCGAGGTGGCAATGCTACTAACATTCATGGGATAGAACATGGA 1206
Query 1909 TGGGCTTGGTTAGCCCGGTTCCTTAACAAAATCCCAGC---CAACAGAGCCACTGCGACA 1965
||||||||||| ||||||||||||||||||||| |||| |||||||| ||||| ||
Sbjct 1207 TGGGCTTGGTTGGCCCGGTTCCTTAACAAAATCTCAGCTAACAACAGAGTTACTGCAACC 1266
Query 1966 GCCTTGAACTCCTTTCTCCAGA 1987
||||| ||| ||||||||||||
Sbjct 1267 GCCTTAAACGCCTTTCTCCAGA 1288
Score = 313 bits (169), Expect = 5e-84
Identities = 201/216 (93%), Gaps = 4/216 (2%)
Strand=Plus/Plus
Query 1118 aggaggaggccaggaggaag-gaaaggGCTCATCAAGAAGAGAAAATACGTCAAGAAAAA 1176
||||||| ||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct 536 AGGAGGAAGCCAGGAGG-AGAGAAAGGGCTCATCAAGAAGAGAAAATACGTCAAGAAAAA 594
Query 1177 GCTCGCGCAGAGGCTCAAATGCTAGCaaaaatcagagctgaagaagaaaagaaagaagtt 1236
|||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 595 GCTCGCACAGAGGCTGAAATGCTAGCAAAAATCAGAGCTGAAGAAGAAAAGAAAGAAGTT 654
Query 1237 gagagaaaggcagccagagaagtagctgaaaaag-aagtagcagaTCGCAAAGCTGCCGA 1295
|||||||||||||||| |||||||| || ||||| ||| ||||| |||||||||| ||||
Sbjct 655 GAGAGAAAGGCAGCCAAAGAAGTAG-TGGAAAAGGAAGAAGCAGGTCGCAAAGCTACCGA 713
Query 1296 ACAAAAACTTGCGGAACAGAAGGCTGTGATAGAGAG 1331
| |||||||||| ||| |||||||||||||||||||
Sbjct 714 AAAAAAACTTGCAGAAGAGAAGGCTGTGATAGAGAG 749
Score = 274 bits (148), Expect = 2e-72
Identities = 188/207 (91%), Gaps = 4/207 (2%)
Strand=Plus/Plus
Query 818 GTCTGGCTGAGAGTGCCCTATATGAGGTTATCAACGACCACCAAACCGAAATCAAGGACG 877
||||||||| |||||||||||||||||| || || ||||||| |||||| |||||||| |
Sbjct 326 GTCTGGCTGCGAGTGCCCTATATGAGGTGATTAATGACCACCTAACCGATATCAAGGAGG 385
Query 878 ACATTAGGAATCAAGT-ATCAGTTGTTGAAACAGAAATAATGAATGAGATTGAAACGTCT 936
|||||||||||||||| | ||||||||||||| |||||| ||||||||||||||||||||
Sbjct 386 ACATTAGGAATCAAGTCA-CAGTTGTTGAAACGGAAATAGTGAATGAGATTGAAACGTCT 444
Query 937 CTCTCTGCCATAGCCCGGGTTGAAAAGTACAGTG-AGACTCGGAAAGAAGTTGAACGGAA 995
| ||||| |||||| |||||||||||||||||| || |||| |||||||| ||||||||
Sbjct 445 CGGTCTGCAATAGCCGGGGTTGAAAAGTACAGTGAAG-CTCGAAAAGAAGTAGAACGGAA 503
Query 996 ACTTGATCTTCAATATCAGCGAAAAGT 1022
|||||||||||||||||||||||||||
Sbjct 504 ACTTGATCTTCAATATCAGCGAAAAGT 530
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 91454678245
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5