BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G13320.1
Length=2070
Score E
Sequences producing significant alignments: (Bits) Value
Ahg920212 jgi|Araly1|920212|scaffold_101493.1 3066 0.0
Ahg936261 jgi|Araly1|936261|scaffold_500452.1 2041 0.0
Ahg472822 jgi|Araly1|472822|fgenesh2_kg.1__2776__AT1G25490.1 1136 0.0
> Ahg920212 jgi|Araly1|920212|scaffold_101493.1
Length=1804
Score = 3066 bits (1660), Expect = 0.0
Identities = 1746/1789 (98%), Gaps = 0/1789 (0%)
Strand=Plus/Plus
Query 71 TGATTTGAGTTTTGGTGAGGATGTCTATGGTTGATGAGCCTTTATACCCGATTGCTGTGC 130
|||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 TGATTTGAGTTTTGGTCAGGATGTCTATGGTTGATGAGCCTTTATACCCGATTGCCGTGC 60
Query 131 TTATCGACGAGCTAAAAAACGATGATATTCAGCGTAGATTGAACTCTATTAAACGGCTTT 190
||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct 61 TTATCGACGAGCTAAAAAACGATGATATTCAGCTTAGATTGAACTCTATTAGACGGCTTT 120
Query 191 CTATCATTGCTCGTGCTCTTGGAGAGGAGAGGACAAGAAAAGAGTTGATTCCATTTCTTA 250
||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct 121 CTATCATTGCTCGTGCTCTTGGAGAGGAGAGGACAAGGAAAGAGTTGATTCCGTTTCTTA 180
Query 251 GTGAGAACAATGACGATGACGATGAGGTGCTTTTGGCTATGGCGGAAGAGTTGGGGGGTT 310
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||
Sbjct 181 GTGAGAACAATGACGATGATGATGAGGTGCTTTTGGCTATGGCGGAAGAGTTGGGGGTTT 240
Query 311 TTATTCTGTATGTAGGAGGGGTTGAGTATGCATATGTTCTGCTTCCACCTTTGGAGACTC 370
|||||| ||||||||||||||||||||||||| ||||| |||||||||||||||||||||
Sbjct 241 TTATTCCGTATGTAGGAGGGGTTGAGTATGCACATGTTTTGCTTCCACCTTTGGAGACTC 300
Query 371 TATCCACTGTTGAGGAAACTTGCGTGAGGGAGAAAGCTGTGGATTCACTTTGTAGAATTG 430
| | | |||||||||||||||||||||||| |||||||| ||||||||||| |||||||
Sbjct 301 TCGCGAGTGTTGAGGAAACTTGCGTGAGGGAAAAAGCTGTAGATTCACTTTGCAGAATTG 360
Query 431 GTGCTCAGATGAGGGAGAGTGACTTGGTTGAGCATTTCACTCCTCTGGCTAAGCGACTTT 490
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GTGCTCAGATGAGGGAGAATGACTTGGTTGAGCATTTCACTCCTCTGGCTAAGCGACTTT 420
Query 491 CAGCTGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGATTTTCCATATTGCATACC 550
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 421 CAGCTGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGATTTTCCATATTGCATACC 480
Query 551 CAAGTGCCCCAGATGTGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAG 610
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 481 CAAGTGCCCCAGATCCGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAG 540
Query 611 ATGACATGCCAATGGTGCGCAGAGCTGCAGCAACTAATTTGGGGAAGTTTGCTGCTACAA 670
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct 541 ATGACATGCCAATGGTGCGCAGAGCTGCAGCAACCAATTTGGGGAAGTTTGCTGCTACCA 600
Query 671 TTGAATCAGCTCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATG 730
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 601 TTGAATCAGCTCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATG 660
Query 731 ATCAAGATTCGGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGG 790
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 661 ATCAAGATTCGGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGG 720
Query 791 AGCCCCAGGACTGTGTTGCACACATTCTTCCTGTGATTGTCAATTTCTCGCAGGATAAGT 850
|||||||||||||||| ||||||||||||||||||||||| | |||||||||||||||||
Sbjct 721 AGCCCCAGGACTGTGTCGCACACATTCTTCCTGTGATTGTGACTTTCTCGCAGGATAAGT 780
Query 851 CCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGAC 910
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 781 CCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGAC 840
Query 911 CGGAGCCAACTAGGACGGATCTGGTGCCTGCATATGCTCGTCTACTTTGTGATAATGAGG 970
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 841 CGGAGCCAACTAGGACGGATCTGGTGCCTGCATATGCTCGTCTACTTCGTGATAATGAGG 900
Query 971 CAGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTG 1030
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 901 CTGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTG 960
Query 1031 AACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGC 1090
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 961 AACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGC 1020
Query 1091 ACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATG 1150
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1021 ACGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATG 1080
Query 1151 CAACAATTGAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATG 1210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1081 CAACAATTGAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATG 1140
Query 1211 TACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTAC 1270
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1141 TACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTGC 1200
Query 1271 TATCACAATCGTTACTGCCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTAC 1330
|||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 TATCGCAATCATTACTACCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTAC 1260
Query 1331 GTCTGGCTATAATCGAGTATATTCCCTTGTTGGCCAGTCAATTAGGTGTAGGCTTCTTTG 1390
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GTCTGGCTATAATAGAGTATATTCCCTTGTTGGCCAGTCAATTAGGTGTAGGCTTCTTTG 1320
Query 1391 ATGAGAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTG 1450
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1321 ATGATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTG 1380
Query 1451 AAGCTGCTGCAAACAATCTGAAGCGTCTTGCTGAAGAGTTTGGTCCTGAATGGGCAATGC 1510
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 AAGCTGCTGCAAACAATCTTAAGCGTCTTGCTGAAGAGTTTGGTCCTGAATGGGCAATGC 1440
Query 1511 AGCATATAGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGATGA 1570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1441 AGCATATAGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGATGA 1500
Query 1571 CGATTCTTCGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTTCCA 1630
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1501 CAATTCTTCGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTTCCA 1560
Query 1631 AACTCTTACCTGCGGTAATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTAACG 1690
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 1561 AACTCTTGCCTGCGGTGATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTAATG 1620
Query 1691 TGGCCAAAATGATGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACATGA 1750
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1621 TGGCCAAAATGATGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACATGA 1680
Query 1751 TACGGCCATGCTTGGTGGAGCTAAGTGAAGACCCAGATGTTGATGTTCGGTATTTCGCAA 1810
|||||||||||||||||||||||||||||||||| || ||||||||||| | ||||||||
Sbjct 1681 TACGGCCATGCTTGGTGGAGCTAAGTGAAGACCCGGACGTTGATGTTCGTTTTTTCGCAA 1740
Query 1811 ATCAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTaaaaaaa 1859
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1741 ATCAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTAAAAAAA 1789
> Ahg936261 jgi|Araly1|936261|scaffold_500452.1
Length=1808
Score = 2041 bits (1105), Expect = 0.0
Identities = 1569/1793 (88%), Gaps = 32/1793 (2%)
Strand=Plus/Plus
Query 81 TTTGGTGAGGATGTCTATGGTTGATGAGCCTTTATACCCGATTGCTGTGCTTATCGACGA 140
|||| ||| |||||||||| | |||||||| || || || || ||||||||||| |||||
Sbjct 15 TTTGTTGAAGATGTCTATGATCGATGAGCCGTTGTATCCAATCGCTGTGCTTATAGACGA 74
Query 141 GCTAAAAAACGATGATATTCAGCGTAGATTGAACTCTATTA-AACGGCTTTCTATC-ATT 198
| ||||||||||||||||||||| ||||||||||||||||| || | ||||||| | |||
Sbjct 75 GTTAAAAAACGATGATATTCAGCTTAGATTGAACTCTATTAGAA-GACTTTCTA-CAATT 132
Query 199 GCTCGTGCTCTTGGAGAGGAGAGGACAAGAAAAGAGTTGATTCCATTTCTTAGTGAGAAC 258
|||||||||||||| || ||| |||| || || ||||||||||| ||||||||||| |||
Sbjct 133 GCTCGTGCTCTTGGTGAAGAGCGGACTAGGAAGGAGTTGATTCCTTTTCTTAGTGAAAAC 192
Query 259 AATGACGATGACGATGAGGTGCTT-TTGGCTATGGCGGAAGAGTTGGGGGGTTTTATT-C 316
||||||||||| ||||||||| || ||||| ||||| ||||| ||||| | ||||||| |
Sbjct 193 AATGACGATGATGATGAGGTG-TTGTTGGCAATGGCTGAAGAATTGGGTGTTTTTATTCC 251
Query 317 TGTATGTAGGAGGGGTTGAGTATGCATATGTTCTGCTTCCACCT-TTGGAGACTCTATCC 375
| ||||| || || |||||||||||| ||||| ||||||| || ||||| ||||| ||
Sbjct 252 T-TATGTTGGTGGTGTTGAGTATGCACATGTTTTGCTTCC-GCTGTTGGAAACTCTTTCG 309
Query 376 ACTGTTGAGGAAACTTGCGTGAGGGAGAAAGCTGTGGATTCACTTTGTAGAATTGGTGCT 435
| |||||| |||||||| ||||||||||||||||| || || ||||||||| ||||| ||
Sbjct 310 AGTGTTGAAGAAACTTGTGTGAGGGAGAAAGCTGTTGAGTCGCTTTGTAGAGTTGGTTCT 369
Query 436 CAGATGAGGGAGAGTGACTTGGTTGAGCATTTCACT-CC-TCTGGCTAAGCGACTTTCAG 493
||||||| |||||||||||||||||| ||||| | | || | | | |||||||||| | |
Sbjct 370 CAGATGAAGGAGAGTGACTTGGTTGATCATTTTA-TACCAT-TAGTTAAGCGACTTGCGG 427
Query 494 CTGGTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGATTTTCCATATTGCATACCCAA 553
||||||| ||||| ||||| ||||||||||| || ||| |||||||||||||||||||||
Sbjct 428 CTGGTGAGTGGTTTACAGCTAGAGTATCAGCTTGCGGGGTTTTCCATATTGCATACCCAA 487
Query 554 GTGCCCCAGATGTGCTAAAGACGGAGCTAAGATCAATATATGGTCAGCTTTGTCAAGATG 613
| || || ||| || | ||||| ||| ||||||| ||||| ||||| ||||| ||||
Sbjct 488 GCGCGCCGGATATGTTGAAGACTGAGTTAAGATCGTTATATACCCAGCTCTGTCAGGATG 547
Query 614 ACATGCCAATGGTGCGCAGAGCTGCAGCAACTAATTTGGGGAAGTTTGCTGCTACAATTG 673
| |||||||||||||| ||||||||||| || ||| ||||||| ||||||||||| ||||
Sbjct 548 ATATGCCAATGGTGCGGAGAGCTGCAGCTACCAATCTGGGGAAATTTGCTGCTACGATTG 607
Query 674 AATCAGCTCATTTGAAGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGATGATC 733
||||||| ||||||||||| |||||||||||||||||||| |||||||| ||||||||||
Sbjct 608 AATCAGCGCATTTGAAGACTGACATTATGTCCATGTTTGATGATCTTACTCAAGATGATC 667
Query 734 AAGATTCGGTTAGATTATTGGCTGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGGAGC 793
||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 668 AAGATTCTGTTAGATTATTGGCCGTTGAGGGTTGTGCTGCTCTTGGGAAATTGTTGGAGC 727
Query 794 CCCAGGACTGTGTTGC-ACACATTCTTCCTGTGATTGTCAATTTCTCGCAGGATAAGTCC 852
|||||||||||| | | |||||||||||| |||||||| ||||||||||||||||||||
Sbjct 728 CCCAGGACTGTG-TCCAACACATTCTTCCCGTGATTGTTAATTTCTCGCAGGATAAGTCT 786
Query 853 TGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGTAGGACCG 912
||||||||||| ||||||||||| ||||| ||||| || |||||||||||||| |||||
Sbjct 787 TGGCGTGTGCGCTATATGGTTGCGAATCAACTCTACGAGCTTTGTGAAGCTGTGGGACCT 846
Query 913 GAGCCAACTAGGACGGATCTGGTGCCTGCATATGCT-CGTCTACTTTGTGATAATGAGGC 971
|| | ||||||||||| |||||||||||||||| | ||||||||| |||||||||||||
Sbjct 847 GAATCTACTAGGACGGAGCTGGTGCCTGCATATG-TGCGTCTACTTCGTGATAATGAGGC 905
Query 972 AGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTCGCATTTTAAACCCTGA 1031
||||| || ||||||||||| ||||||||||| ||||||||||| ||| ||||||||||
Sbjct 906 TGAAGTACGCATAGCAGCTGCAGGAAAAGTTACAAAGTTTTGTCGGATTCTAAACCCTGA 965
Query 1032 ACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGACTCTTCTCAGCA 1091
| | ||||||||||||||||| |||||||| ||||| ||||||| ||||||||||||||
Sbjct 966 AATTGCTATCCAGCACATTCTCCCCTGTGTGAAGGAGCTATCATCGGACTCTTCTCAGCA 1025
Query 1092 CGTCAGATCTGCATTGGCATCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATGC 1151
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1026 TGTCAGATCTGCATTGGCCTCAGTTATAATGGGAATGGCTCCAGTCTTGGGTAAGGATGC 1085
Query 1152 AACAATTGAGCATCTTCTTCCAATCTTTCTTTCTCTATTGAAAGACGAATTTCCTGATGT 1211
||||||||||||||| ||||||||||||||||||||||||||||| || || || |||||
Sbjct 1086 AACAATTGAGCATCTCCTTCCAATCTTTCTTTCTCTATTGAAAGATGAGTTCCCGGATGT 1145
Query 1212 ACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTTATTGGGATTGATCTACT 1271
|||||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct 1146 ACGCTTGAACATTATCAGCAAACTCGACCAAGTGAATCAGGTTATTGGGATTGATCTACT 1205
Query 1272 ATCACAATCGTTACTGCCAGCCATTGTAGAACTTGCTGAAGACAGGCACTGGAGAGTACG 1331
||||||||| || ||||||| |||||||||||||||||||| || |||||||||||| |
Sbjct 1206 ATCACAATCCTTGTTGCCAGCTATTGTAGAACTTGCTGAAGATAGACACTGGAGAGTAAG 1265
Query 1332 TCTGGCTATAATCGAGTATATTCCCTTG-TTGGCCAGTCAATTAGGTGTAGGCTTCTTTG 1390
|| |||||||| |||||||| ||||| ||||| ||||| |||||||| ||||||||||
Sbjct 1266 ACTTGCTATAATTGAGTATAT-CCCTTTATTGGCAAGTCAGTTAGGTGTTGGCTTCTTTG 1324
Query 1391 ATGAGAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGTG 1450
| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1325 ACGATAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGACAAGGTTCACTCAATCCGC- 1383
Query 1451 AA-GCTGCTGCAAACAATCTGAAGCGTCTTGCTGA-AGAGTTTGGTCCTGAATGGGCAAT 1508
|| |||||||| |||||||| ||||| |||||||| | | ||||||||||||||||| ||
Sbjct 1384 AATGCTGCTGCTAACAATCTCAAGCGGCTTGCTGAGAAA-TTTGGTCCTGAATGGGCTAT 1442
Query 1509 GCAGCATATAGTTCCTCAGGTTCTAGAGATGATTAACAACCCACACTATCTATATCGGAT 1568
||| |||||||||||||||||||| ||||||||||||||||| |||||||| || || ||
Sbjct 1443 GCAACATATAGTTCCTCAGGTTCTTGAGATGATTAACAACCCTCACTATCTCTACCGAAT 1502
Query 1569 GACGATTCTT-CGTGCAGTATCGCTTCTCGCTCCAGTAATGGGATCCGAGATCACATGTT 1627
||| ||| || || || || || ||||| || ||||||||||| || || |||||||| |
Sbjct 1503 GACCATT-TTACGCGCGGTTTCTCTTCTTGCACCAGTAATGGGCTCAGAAATCACATGCT 1561
Query 1628 CCAAACTCTTACCTGCGGTAATAACTGCATCTAAAGACAGAGTTCCAAACATCAAATTTA 1687
| || ||||| |||| ||||| ||||||||||||||||||||||||||||||||||| |
Sbjct 1562 CTAAGCTCTTGCCTGTAGTAATGACTGCATCTAAAGACAGAGTTCCAAACATCAAATTCA 1621
Query 1688 ACGTGGCCAAAATGATGCAATCTCTCATTCCGATAGTCGACCAAGCGGTTGTGGAGAACA 1747
|||| || ||| || | ||||| |||||||| |||||||| ||| |||||||||| || |
Sbjct 1622 ACGTAGCGAAAGTGCTTCAATCCCTCATTCCAATAGTCGATCAATCGGTTGTGGAAAAGA 1681
Query 1748 TGATACGGCCATG--CTTGGTGGAGCTAAGTGAAGACCCAGATGTTGATGTTC-GGTATT 1804
||| || || || |||| |||||||||| || || ||||| |||||||| | ||| ||
Sbjct 1682 CGATTCGTCC-TGGGCTTG-TGGAGCTAAGCGAGGATCCAGACGTTGATGT-CAGGTTTT 1738
Query 1805 TCGCAAATCAAGCTCTCCAATCTATTGACAATGTGATGATGTCTAGCTaaaaa 1857
||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1739 TCGCAAACCAAGCTCTTCAATCTATTGACAATGTGATGATGTCTAGCTAAAAA 1791
> Ahg472822 jgi|Araly1|472822|fgenesh2_kg.1__2776__AT1G25490.1
Length=2108
Score = 1136 bits (615), Expect = 0.0
Identities = 1404/1775 (79%), Gaps = 94/1775 (5%)
Strand=Plus/Plus
Query 90 GATGTCTATGGTTGATGAGCC-TT-TATACCCGATTGCTGTGCTTATCGACGAGCTAAAA 147
|||| ||||||| ||||| || || ||| ||| ||||||||||| || || ||||| ||
Sbjct 132 GATGGCTATGGTAGATGAACCGTTGTAT-CCC-ATTGCTGTGCTCATAGATGAGCTTAAG 189
Query 148 AACGATGATATTCAGCGTAGATTGAACTCTATTAAACGGCTT-TCTATC-ATTGCTCGTG 205
|| ||||||||||||| | | |||||||| || | |||| |||| | || |||||||
Sbjct 190 AATGATGATATTCAGCTTCGTTTGAACTCGATCCGTC-GCTTATCTA-CTATAGCTCGTG 247
Query 206 CTCTTGGAGAGGAGA-GGACAAGAAAAGAGTTGATTCCATTTCTT-AGTGAGAACAATGA 263
| ||||| ||||| | | ||||| || || || | ||| ||| || |||||||| | |||
Sbjct 248 CCCTTGGTGAGGA-ACGCACAAGGAAGGAATT-AATCCCTTTTTTGAGTGAGAATAGTGA 305
Query 264 CGATGACGATGAGGTGCT-TTTGGCTATGGCGGAAGAGTTGGGGGGTTTTATTCTGTATG 322
|||||||| |||||||| || || ||||| || || ||||| | |||||||| || ||
Sbjct 306 TGATGACGACGAGGTGCTGCTT-GCAATGGCTGAGGAATTGGGAGTTTTTATTCCGTTTG 364
Query 323 TAGGAGGGGTTGAGTATGCATATGTTCTGCTTCCACCTTTGGAGA-CTCTATCCACTGTT 381
| ||||| |||||||||| ||||||| ||||| |||||||| | |||| | ||||||
Sbjct 365 TCGGAGGAATTGAGTATGCGCATGTTCTTCTTCCTCCTTTGGA-ATCTCTCTGTACTGTT 423
Query 382 GAGGAAACTTGCGTGAGGGAGAAAGCTGTGGATTCACTTTGT-AGAATTGG-TGCTCAGA 439
|| || || || ||||| || ||||||||||| || |||||| || || || | |||| |
Sbjct 424 GAAGAGACCTGTGTGAGAGAAAAAGCTGTGGAGTCGCTTTGTAAG-ATCGGAT-CTCAAA 481
Query 440 TGAGGGAGAGTGA-CTTGGTTG-AGCATTTCACTCCTCTGGCT-AAGCGACTTTCAGCTG 496
||| |||| ||| ||| |||| | | ||| | ||||| | | ||| |||| ||||||
Sbjct 482 TGAAAGAGAATGATCTT-GTTGAATCCTTTGTC-CCTCTTG-TGAAGAGACTAGCAGCTG 538
Query 497 GTGAATGGTTCACAGCCAGAGTATCAGCATGTGGGAT-TTTCCATATTGCATACCCAA-G 554
|||||||||| |||| ||||| || |||||||| || ||| ||| ||||||| |||| |
Sbjct 539 GTGAATGGTTTGCAGCAAGAGTTTCTGCATGTGGTATATTT-CATGTTGCATA-CCAAGG 596
Query 555 -TGCCCCAGATGTGCTAAAGACGGAGCTAAGATC-AATATATGGTCAGCTT-TGTCAAGA 611
|| | | |||||||| ||||| ||| || | | | | ||| | ||| || || |||||
Sbjct 597 TTG-CACTGATGTGCTGAAGACAGAGTTACGGGCTACT-TATAGCCAG-TTGTGCCAAGA 653
Query 612 TGACATGCCAATGGTGCGCAGAGCTGCAGCAACTAATTTGGGGAAGTTTGCTGCTACAAT 671
||| ||||| |||||||| |||||||| ||| |||| ||||||| |||||| | || |
Sbjct 654 TGATATGCCTATGGTGCGAAGAGCTGCTGCATCTAACCTGGGGAAATTTGCTACAACTGT 713
Query 672 TGAATC-AGCTCATTTGA-AGACAGACATTATGTCCATGTTTGAGGATCTTACGCAAGAT 729
|| || | || ||||| | | || || ||| | ||||| || |||||||| |||||
Sbjct 714 CGAGTCTACCT-TTTTGATTG-CTGAGATCATGACTATGTTCGATGATCTTACTAAAGAT 771
Query 730 GATCAAGATTCGGTTAGA-TTATTGGCTGTTG-AGGGTTGTGCTGCTCTTGGGAAA-TTG 786
|| |||||||| || ||| || |||||||| | |||| ||||| |||||| ||||| |||
Sbjct 772 GACCAAGATTCTGTGAGACTT-TTGGCTGTGGAAGGG-TGTGCAGCTCTT-GGAAAGTTG 828
Query 787 TTGGAGCCCCAGGACTGTGTTGCACACATTCTT-CCTGTGATTGTCAATTTCTCGCAGGA 845
|||| || ||||| |||||||||| |||| || ||||| ||||| |||||||| |||||
Sbjct 829 CTGGAACCTCAGGATTGTGTTGCACGCATT-TTACCTGTTATTGTTAATTTCTCTCAGGA 887
Query 846 TAAGTCCTGGCGTGTGCGTTATATGGTTGCAAATCAGCTCTATGAACTTTGTGAAGCTGT 905
||| || ||| | ||||| || |||||||| |||||||| |||||||||||||| || ||
Sbjct 888 TAAATCTTGGAGGGTGCGCTACATGGTTGCTAATCAGCTATATGAACTTTGTGAGGCAGT 947
Query 906 AGGACCGGA--GCCAACTAGGACGGATCTGGTGCCTGCATATGCT-CG-TCTACTTTGTG 961
|| || || | | || ||||||||| |||| || ||||||| | | | | || | |
Sbjct 948 GGGTCCTGATTG-C-ACGAGGACGGATTTGGTTCCAGCATATG-TGAGAT-TGCTAAGGG 1003
Query 962 ATAATGAGGCAGAAGTTCGGATAGCAGCTGCTGGAAAAGTTACCAAGTTTTGTC-GCATT 1020
| |||||||| ||||| || |||||||| || |||||||| |||||||| |||| || ||
Sbjct 1004 ACAATGAGGCTGAAGTGCGAATAGCAGCAGCGGGAAAAGTGACCAAGTTCTGTCGGC-TT 1062
Query 1021 TTAAACCCTGAACTCGCTATCCAGCACATTCTTCCCTGTGTAAAGGAATTATCATCAGAC 1080
|| || || || || || || |||||||| ||||| ||||| |||||||||||||| ||
Sbjct 1063 TTGAATCCAGAGCTTGCGATTCAGCACATCCTTCCTTGTGTGAAGGAATTATCATCTGAT 1122
Query 1081 TCTTCTCAGCACGTCAGATCTGCAT-TGGCATCAGTTATAATGGGAATGGCTCC-AGT-C 1137
|||||||| || ||| | ||||| | | || ||||| ||||||||||||||||| | | |
Sbjct 1123 TCTTCTCAACATGTCCGCTCTGC-TCTAGCTTCAGTAATAATGGGAATGGCTCCTA-TCC 1180
Query 1138 TTGGGTAAGGA-TGCAACAATTGAGCATCTTCTT-CCAATCTTTCTTTCTCTAT-TGAAA 1194
||||| ||||| | |||| |||||||||| | || ||||| |||||||| || | |||||
Sbjct 1181 TTGGG-AAGGACT-CAACCATTGAGCATC-TGTTACCAATTTTTCTTTCCCT-TCTGAAA 1236
Query 1195 GACGAATTTCCTGATGTACGCTTAAACATTATCAGCAAACTTGACCAAGTGAACCAGGTT 1254
|| |||||||||||||| ||| | ||||| || ||||| || || ||||| |||||||||
Sbjct 1237 GATGAATTTCCTGATGTGCGCCTCAACATCATAAGCAAGCTAGATCAAGTCAACCAGGTT 1296
Query 1255 ATTGGGATTGATCTACTATCACAATCGTTACTGCCAGCCATTGTAGAACTTGCTGAAGA- 1313
||||| ||||||||||| || ||||| || | || ||||||||||| |||||||| ||
Sbjct 1297 ATTGGAATTGATCTACTGTCTCAATCCTTGTTACCGGCCATTGTAGAGCTTGCTGAGGAT 1356
Query 1314 CAGGCACTGGAGAGTACGTCTGGCTATAATCGAGTATATTCCCT-TGTTGGCCAGTCAAT 1372
| ||||||||||||| || || || ||||| |||||| || ||| |||||||||| || |
Sbjct 1357 C-GGCACTGGAGAGTCCGACTTGCGATAATAGAGTATGTT-CCTCTGTTGGCCAGCCAGT 1414
Query 1373 TAGGTGTAGGCTTCTTT-GATGAGAAGCTTGGTGCTCTTTGCATGCAATGGTTACAAGAC 1431
||||| |||| || ||| ||||| |||||||| || ||||||||||||||| | ||||||
Sbjct 1415 TAGGTATAGGATT-TTTCGATGACAAGCTTGGAGCCCTTTGCATGCAATGGCTGCAAGAC 1473
Query 1432 AAGGTTC-ACTCAATCCGTGAAGCTGCTGCAAACAATCTGAAGCGTCTTGCTGAAGAGTT 1490
|||| || |||| |||||||||||||| |||||||| || ||||| ||||| || |||||
Sbjct 1474 AAGG-TCTACTCTATCCGTGAAGCTGCAGCAAACAACCTAAAGCGCCTTGCAGAGGAGTT 1532
Query 1491 TGGTCCTGAATGGGCAATGCAGCA-TATAGTTCCTCAGGT-TCTAGAGATGATTAACAAC 1548
|||||||||||||||||||||||| | ||||||| ||||| | | || ||| | |||||
Sbjct 1533 TGGTCCTGAATGGGCAATGCAGCACT-TAGTTCCCCAGGTAT-TGGACATGGTCAACAAT 1590
Query 1549 CCACACTATCTATATCGGATGACGATTCTTCGTGCAGTATCGCTTC-TCGCTCCAGTAAT 1607
|||||||| ||| || |||||| | |||| |||||| |||| || | | ||||| |||||
Sbjct 1591 CCACACTACCTACATAGGATGATGGTTCTACGTGCAATATCTCT-CATGGCTCCTGTAAT 1649
Query 1608 GGGATCCGAGATCACATGTTCCAAACT-CTTACCTGCGGTAAT--AACTGCATCTAAAGA 1664
|||||| || |||||||| || || | ||| |||| ||| | || ||||| |||||
Sbjct 1650 GGGATCAGAAATCACATGCTCTAAGTTTCTT-CCTGTGGTCGTTGAA--GCATCGAAAGA 1706
Query 1665 CAGAGTTCCAAACATCAAATTTAACGTGGCCAAAA-TGATGCAATCTCTCATTCCGATAG 1723
|||||||||||||||||| || || || || |||| | ||||||| ||||| || ||||
Sbjct 1707 CAGAGTTCCAAACATCAAGTTCAATGTTGC-AAAACTTCTGCAATCCCTCATCCCCATAG 1765
Query 1724 TCGACCAAGCGGTTGTGGAGAACATGATACGGCCA-TGCTTGGTGGAGCTAAGTGAAGAC 1782
|||||||| | || ||||| || | || || | | || ||||| || || || ||||||
Sbjct 1766 TCGACCAATCAGTGGTGGACAAAACAATCCGTC-AGTGTTTGGTAGACCTTAGCGAAGAC 1824
Query 1783 CCAGATGTTGATGTTCGGTATTTCGCAAATCAAGC 1817
|| |||||||||||||| ||||| ||||| |||||
Sbjct 1825 CCTGATGTTGATGTTCGCTATTTTGCAAACCAAGC 1859
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 77856460780
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5