BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: halleri_transcript_ahg.fa
32,672 sequences; 38,939,717 total letters
Query= AT1G14100.1
Length=1551
Score E
Sequences producing significant alignments: (Bits) Value
Ahg911202 jgi|Araly1|911202|Al_scaffold_0001_1456 1312 0.0
Ahg911203 jgi|Araly1|911203|Al_scaffold_0001_1457 989 0.0
Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189 928 0.0
Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402 706 0.0
Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2 691 0.0
> Ahg911202 jgi|Araly1|911202|Al_scaffold_0001_1456
Length=1032
Score = 1312 bits (710), Expect = 0.0
Identities = 920/1018 (90%), Gaps = 28/1018 (3%)
Strand=Plus/Plus
Query 54 ACTCTCATTCTTCAAT-ATTTTCAATTACCAGCTTC-TGGATGCTACAACCAACGGTTCA 111
||| ||| ||||| || || ||||| ||||||||| | ||||||||||||||||||||
Sbjct 36 ACTATCAATCTTC-ATCATCTTCAACCACCAGCTTCAT-AATGCTACAACCAACGGTTCA 93
Query 112 AAGGATTCCAGGAAATCAAAG-GATAAACTGTTAGGAGGGCT-TTTAACAGCTGATTTTG 169
| ||||||| |||| | || ||||||||||||||| |||| || || | || ||||
Sbjct 94 ACGGATTCC-CGAAAACCGAGAGATAAACTGTTAGGAAGGCTACTT-ACTGAAGAGTTTG 151
Query 170 ATGAAGATTCTTGCTTGAGTAGGTATGAGTCTTCCTTGTATCGCAAGCCTTCACCATACA 229
|||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||
Sbjct 152 ATGAAGATTCTTGCTTGAGTAGGTATCAGTCTTCCTTTTATCGCAAGCCTTCACCATACA 211
Query 230 AACCATCCAGATATCTCGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAGCGTTGCG 289
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 212 AACCATCCAGATATCTCGTCTCTAAGCTTAGAAGCTACGAGATGCTTCACAAGCGTTGCG 271
Query 290 GTCCAGGCACAGAAGCTTACAAGAAAGCAACGGAGATTCTTGGTCATGATGATGAGAATC 349
|||| |||||| ||||||||||||||||||| |||| |||| | | ||| | |||
Sbjct 272 GTCCTGGCACAAAAGCTTACAAGAAAGCAACAGAGAGTCTT-G----G-TGA--A-AATT 322
Query 350 ATTCAACCAAATCTGTTGGTGAATGCAGATACATTGTGTGGATTGCTGTTTATGGGCTAG 409
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 323 ATTCAAGCAAATCTGTTGGTGAATGCAGATACATTGTGTGGATTGCTGTTTATGGGCTAG 382
Query 410 GAAACAGAATACTTACTCTTGCTTCTCTGTTTCTCTATGCTCTCTTGACTGACAGAATCA 469
|||||||| ||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct 383 GAAACAGACTACTTACTCTTGCTTCTTTGTTTCTCTATGCTCTCTTAACTGACAGAATCA 442
Query 470 TGCTTGTTGACCAACGTACGGACAT-AAGTGACCTCTTCTGTGAGCCTTTTCCAGGTACT 528
|||||||||||||||| | |||||| ||| || ||||| |||||||||||||||||||||
Sbjct 443 TGCTTGTTGACCAACGCAAGGACATAAAG-GATCTCTTATGTGAGCCTTTTCCAGGTACT 501
Query 529 TCCTGGCTACTCCCTCTGGATTTTCCACTAACAGATCAATTAGATAGCTTCAACAAGGAA 588
|| ||||||||||||||||||||| ||||||||||||| |||||||||||| || ||||
Sbjct 502 TCTTGGCTACTCCCTCTGGATTTTACACTAACAGATCAGTTAGATAGCTTCGACCGGGAA 561
Query 589 TCTCCGCGCTGTTACGGAACAATGTTGAAGAATCATGCCATTAACTCAACTACAACAGAA 648
||||| || |||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 562 TCTCCTCGTTGTTACGGAACAATGTTGAAGAATCATGCCATTAACTCGACT---AC---- 614
Query 649 AGCATCATCCCCTCGTACCTCTGTCTTTATCTTATTCACGATTACGACGATTATGATAAG 708
| ||||||||||| |||||||||||||||||||||| |||||||| ||| ||||||||
Sbjct 615 A--ATCATCCCCTCATACCTCTGTCTTTATCTTATTCCCGATTACGTGGATCATGATAAG 672
Query 709 ATGTTCTTCTGTGAAAGTGACCAAATTCTCATCAGGCAAGTCCCTTGGTTGGTCTTCAAC 768
|||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||
Sbjct 673 ATGTTCTTCTGTGAAAAAGATCAACTTCTCATCAGGCAAGTCCCTTGGTTGGTCTTCAAC 732
Query 769 TCGAATCTTTACTTTATCCCATCTCTATGGTTGATCCCTTCTTTTCAGTCAGAATTAAGC 828
|| ||||||||||| || ||||||||||||||||||||| |||||| || |||||||||
Sbjct 733 TCAAATCTTTACTTCATTCCATCTCTATGGTTGATCCCTAGTTTTCAATCTGAATTAAGC 792
Query 829 AAGCTATTCCCACAGAAAGAAACCGTCTTTCACCATTTGGCTCGCTATCTTTTTCACCCG 888
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 793 AAGCTATTCCCACAGAAAGAAACCGTCTTTCACCATCTGGCTCGCTATCTTTTTCACCCG 852
Query 889 ACTAACCAAGTTTGGGGCATGATCACAAGATCCTATAATGGTTATTTATCAAGAGCTGAT 948
|||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||||||
Sbjct 853 ACTAACCATGTTTGGGGTATGATCACAAGATCCTACAATGCTTATTTATCAAGAGCTGAT 912
Query 949 GAGAGACTTGGGATTCAAGTACGAGTTTTTAGCAAGCCGGCTGGATATTTCCAACATGTC 1008
||||||||||| ||||||||| |||||||||||||||| ||||||||||||| ||||||
Sbjct 913 GAGAGACTTGGAATTCAAGTAAGAGTTTTTAGCAAGCCCGCTGGATATTTCCGGCATGTC 972
Query 1009 ATGGACCAGATCTTAGCCTGTACACAAAGAGAGAAACTATTACCTGAAGTGTTTGTCT 1066
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 973 ATGGACCAAATCTTAGCCTGTACACAAAGAGAGAAACTATTACCTGAAGTGTCTGTCT 1030
> Ahg911203 jgi|Araly1|911203|Al_scaffold_0001_1457
Length=1536
Score = 989 bits (535), Expect = 0.0
Identities = 1183/1483 (80%), Gaps = 96/1483 (6%)
Strand=Plus/Plus
Query 96 TACAACCAACGGTTCAAAGGATTCCAGGAA--ATCAAAG-GATAAACTGTTAGGAGGGCT 152
||| |||||||||| ||| ||| | ||| | ||||| || |||||| ||||||||||
Sbjct 96 TACGACCAACGGTTTAAACAATT-C-TGAACGA-CAAAGTGAGAAACTGCTAGGAGGGCT 152
Query 153 T-TT--AACAGCTGATTTTGATGAAG-ATTCTTGCTTGAGTAGGTATGAGTC-TTCCT-T 206
| || |||| || ||||||| || | |||||||| ||||||||||| || | || |
Sbjct 153 TCTTGCTACAG--GA-TTTGATG-AGAAATCTTGCTTAAGTAGGTATGA-TCAGT-CTAT 206
Query 207 GTATCGCAAGCCTTCACCATACAAACCATCCAGATATCTCGTCTCTAAGCTTAGAAGCTA 266
| | ||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct 207 G-A--GCAAGCCTTCACCATACAAACCATCTGGATATCTTGTCTCTAAGCTTAGAAGCTA 263
Query 267 TGAGATGCTTCACAAGCGTTGCGGTCCAGGCACAGAAGCTTACAAGAAAGCAACGGAG-A 325
||||||||||| ||||| |||||||| |||||| || ||||||||| ||| || || |
Sbjct 264 CGAGATGCTTCAAAAGCGATGCGGTCCTGGCACAAAACCTTACAAGAGAGCTACAAAGCA 323
Query 326 TTCTTGGTCATGATGATGAGAATCATTCAACCAA-ATCTGTTGGTGAATG-CAGATACAT 383
|||||||| | | | | ||| || || |||| || ||||| | | || |
Sbjct 324 -GCTTGGTCA-CA--A--CG-A--ATT-AA-GAAGCTCTGATGACGAATGTC-GGTATGT 371
Query 384 TGTGTGGATTG-CTGT-TTATGGGCTAGGAAACAGAATACTTACTCTTGCTTCTCTGT-T 440
|||||||| || || | || ||| || ||||||||||| ||| ||| || ||||||| |
Sbjct 372 TGTGTGGA-TGCCTATGTT-TGGTCTGGGAAACAGAATGCTTTCTC-TG-GTCTCTGTCT 427
Query 441 T-CTCTATGCTCTCTTGACTGACAGAATCATGCTTGTTGACCAAC-GTACGGACATAAGT 498
| ||||||||||||||||| || ||| |||||||||||||||||| | || || |||| |
Sbjct 428 TCCTCTATGCTCTCTTGACAGATAGAGTCATGCTTGTTGACCAACGGAAC-GATATAACT 486
Query 499 GACCTCTTCTGTGAGCCTTTTCCAGG-TACTTCCTGGCTACTCCCTCTGGATTTTCCACT 557
||||||||||| ||||| ||||| || | ||| ||| |||| ||||| |||| ||| |
Sbjct 487 GACCTCTTCTGCGAGCC-TTTCCCGGAAATTTCATGGTTACTTCCTCTACATTTCCCATT 545
Query 558 AACAGATCAATTAGATAGCTTCAACAAGGAATC-TCCGCGCTGTTACGGAACAATGTTGA 616
|| ||||| ||||| |||||||| |||| | | ||||||||||||| ||||||||||
Sbjct 546 GACTGATCAGCTAGATGGCTTCAACCGGGAA-CATTCGCGCTGTTACGGCACAATGTTGA 604
Query 617 AGAATCATGCCATTAACTCAACTACAACAGAAAGCATCATCCCCTCGTACCTCTGTCTTT 676
||||||||||||||||||||||| ||| | | | | || | || | | | ||||
Sbjct 605 AGAATCATGCCATTAACTCAACT---ACA-ATA-C--CGTCACATC-T---T-TATCTTG 652
Query 677 ATCTTATT-CACGATTACGA-CGATTATGATAAGATGTTCTTCTGTGAAAG-TGACCAA- 732
|| || || || |||| | | ||| ||||||| | ||||||||||| ||| || |||
Sbjct 653 ATATT-TTCCATGATT-CCAGGGATCATGATAAAAAGTTCTTCTGTG-AAGAAGATCAAG 709
Query 733 ATTCTCATCAGGCAAGTCCCTTGGTTGGTCT-TCAACTCGAATCTTTACTTTATCCCATC 791
|| || || || ||||||||||| | || | |||| || || || |||||| | |||||
Sbjct 710 CTT-TCCTCGGGAAAGTCCCTTGGCTCGT-TGTCAAATCCAACCTGTACTTTGTTCCATC 767
Query 792 TCTATGGTTGATCCCTTCTTTTC-AGTCAGAATTAAGCAAGCTATTCCCACAGAAAGAAA 850
||||||| ||||||| ||| | | || || | | ||| |||||||||||||||||||
Sbjct 768 TCTATGGATGATCCCAAGTTTCCAAACCA-AACTCATCAAACTATTCCCACAGAAAGAAA 826
Query 851 CCGTCTTTCACCATTTGGCTCGCTATCTTTTTCACCCGACTAACCAAGTTTGGGGCATGA 910
|||||||||||||||||||||| ||||||||||||||||| |||||||||||||| |||
Sbjct 827 CCGTCTTTCACCATTTGGCTCGATATCTTTTTCACCCGACAAACCAAGTTTGGGGTATGG 886
Query 911 TCACAAGATCCTATAATGGTTATTTATCAAGAGCTGATGAGAGACTTGGGATTCAAGTAC 970
|||| ||||| || |||| ||| ||||||||||| || | |||||| |||||||||||||
Sbjct 887 TCACTAGATCATACAATGCTTACTTATCAAGAGCAGACGCGAGACTCGGGATTCAAGTAC 946
Query 971 GAGTTTTTAGCAAGCCGGCTGGATATTTCCAACATGTCATGGACCAGATCTTAGCCTGTA 1030
|||| |||||||| || ||||||||||||||||| || ||||||||||||||| ||||||
Sbjct 947 GAGTGTTTAGCAAACCCGCTGGATATTTCCAACACGTAATGGACCAGATCTTATCCTGTA 1006
Query 1031 CACAAAGAGAGAAACTATTACCTGAAGTGTTTGTCTTA-GAAACACAAGTCACTAACACA 1089
|||||||||||||||| || |||||| || | | ||| ||||||||||||| |||
Sbjct 1007 CACAAAGAGAGAAACTGTTGCCTGAACTGGCCA-CACAAGAATCACAAGTCACTAATACA 1065
Query 1090 TCAAGAAGCTCGAAACTTAAAGCTGTTCTTG-TCACTTCTCTTTACCCAGAGTACTCGGA 1148
||||||||||| |||||||||||||| |||| |||| ||||| | ||||||||||| ||
Sbjct 1066 TCAAGAAGCTCAAAACTTAAAGCTGT-CTTGGTCACATCTCTGCATCCAGAGTACTCTGA 1124
Query 1149 G-ATTCTAAGGCAA-ATG-TATTGGAAAGGCCCGAGTTCAACAGGAGAGATAATACAAAT 1205
|| |||| | || ||| | |||||| | || |||||||||||||| ||||| || |
Sbjct 1125 TCAT-CTAAAG-AACATGCTTTTGGAACGACCA-AGTTCAACAGGAGAAATAATTGAAGT 1181
Query 1206 TTACCAACCAAGTCAAGAAATATAT-CAGCAAACAGACAATAAGCTTCATGACCAAAAGG 1264
||| || |||||| ||||| | || |||||||||||||| |||||||| ||||||||||
Sbjct 1182 TTATCAGCCAAGTGGAGAAA-AGATTCAGCAAACAGACAAGAAGCTTCACGACCAAAAGG 1240
Query 1265 CACTCGCTGAGATATATCTCTTAAGTTTAACGGATTA-CATTGTCACGAGCGACTCG-TC 1322
|||| || ||||| || ||| |||| |||| ||| | | |||| || ||| || | ||
Sbjct 1241 CACTAGCCGAGATCTACCTCCTAAGCCTAACCGATGAAC-TTGTGACAAGC-ACGAGGTC 1298
Query 1323 TACGTTCGGATACGTTGCTCAAGGTCTTGGAGGATTAAAGCCATGGATACTCTACAAGCC 1382
||| || ||||| || ||||||||||| ||||| ||||||||||||||||||||| ||||
Sbjct 1299 TACCTTTGGATATGTAGCTCAAGGTCTAGGAGGGTTAAAGCCATGGATACTCTACGAGCC 1358
Query 1383 AAAGAACCACACAGCTCCTGAGCCACCATGTGTTC-GTGCCGTGTCAATGGAGCCATGTT 1441
|| | || | | | |||| | |||||||||||| | ||| |||| |||||||| ||||
Sbjct 1359 AAGGGACAAGAAAACTCCAAACCCACCATGTGTTAAG-GCCATGTCGATGGAGCCTTGTT 1417
Query 1442 TCCTTAGAGCTCCACTCTATGGTTGTCAAGCTAAGA-AAGTGAACATCACCCCTTTTGTT 1500
| |||||||| || ||| |||||||||| ||||||| || | || ||||| |||||||||
Sbjct 1418 TTCTTAGAGCACCGCTCCATGGTTGTCAGGCTAAGACAA-TCAAAATCACTCCTTTTGTT 1476
Query 1501 ATGTATTGTGAGGATCGGATCAC-GGGTCTTAAGCTAGTTGAT 1542
| || |||||||||| ||| || ||| |||||||||||||||
Sbjct 1477 AGGTTTTGTGAGGATTGGAAAACAGGG-CTTAAGCTAGTTGAT 1518
> Ahg312409 jgi|Araly1|312409|fgenesh1_pm.C_scaffold_1001189
Length=3378
Score = 928 bits (502), Expect = 0.0
Identities = 1113/1395 (80%), Gaps = 93/1395 (7%)
Strand=Plus/Plus
Query 95 CTACAACCAACGGTTCAAAGGATTCCAGGAA-ATCAAAGGATAAACTGTTAGGAGGGCTT 153
|||||||||||| |||||| || || | || | | | |||||||||| | |||||||||
Sbjct 1916 CTACAACCAACGTTTCAAACGAAACC-GAAACACCGAGGGATAAACTGATCGGAGGGCTT 1974
Query 154 TTAACAGCTGATTTTGATGAAGATTCTTGCTTGAGTAGGTAT--G-AGTCTTCCTTGTAT 210
|||| || ||||| ||||||| ||||||||||||||||||| | | |||| ||||||
Sbjct 1975 CTAACCGCGGATTTCGATGAAGGTTCTTGCTTGAGTAGGTATCAGCAATCTTTGTTGTAT 2034
Query 211 CGCAAGCCTTCACCATACAAACCATCCAG-ATATCTCGTCTCTAAGCTTAGAAGCTATGA 269
|||||| ||||||| ||||| || | | | ||| || |||||||||||||||||||||||
Sbjct 2035 CGCAAGGCTTCACCGTACAAGCC-TTCTGAATACCTTGTCTCTAAGCTTAGAAGCTATGA 2093
Query 270 GATGCTTCACAAGCGTTGCGGTCCAGGCACAGAAGCTTACAAGAAAGCAACGGAGATTCT 329
|| ||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||
Sbjct 2094 GAAGCTTCACAAGCGTTGCGGTCCAGGCACGGATGCTTACAAGAAAGCAACAGAGATTCT 2153
Query 330 TGGTCATGATGATGAGAATCATT-CAACCAAATCTGTTGGTGAATGCAGATACATTGTGT 388
||||||||||||||||||| || ||| ||||||||||||||||||||||||||||||||
Sbjct 2154 TGGTCATGATGATGAGAATT-TTGCAAGCAAATCTGTTGGTGAATGCAGATACATTGTGT 2212
Query 389 GGATTGCTGTTTATGGGCTAGGAAACAGAATACTTACTCTTGCTTCTCTGT-TTC-TCTA 446
|| |||| ||||| ||||||||||||||||| ||||||||| | |||||| ||| ||||
Sbjct 2213 GGGTTGCGGTTTACGGGCTAGGAAACAGAATCCTTACTCTTTC--CTCTGTCTTCCTCTA 2270
Query 447 TGCTCTCTTGACTGACAGAATCATGCTTGTTGACCAACGTACGGACATAAGTGACCTCTT 506
||||||||||| || ||| || | |||||||| ||| ||| || |||||||| |||||
Sbjct 2271 CGCTCTCTTGACAGAGAGAGTCGTTCTTGTTGATCAAAGTAAAGATATAAGTGATCTCTT 2330
Query 507 CTGTGAGCCTTTTCCAGGTACTTCCTGGCTACTCCCTCTGGATTTTCCACTAAC-AGATC 565
||| ||||| |||||||||||||| ||| |||| ||||| || || ||| | | | | |
Sbjct 2331 CTGCGAGCCGTTTCCAGGTACTTCATGGTTACTTCCTCTTGAATTCCCATTGATGAAA-C 2389
Query 566 A-ATTAGATAGCTTCAACAAGGAAT-CTCCGCGCTGTTACGGAACAATGTTGAAGAATCA 623
| ||| ||| | | |||| ||| || ||| || |||||||||||||||||||| |||||
Sbjct 2390 AGATT-GATGGATACAACCAGGGATACTCT-CGTTGTTACGGAACAATGTTGAACAATCA 2447
Query 624 TGCCATTAACTCAACTACAACAGAAAGCATCATCCCCTCGTACCTCTGTCTTTATCTTAT 683
||||| ||||| ||| || || || | || | |||| |||| || || |
Sbjct 2448 AGCCATCAACTCCACTTTAA---------TC--CCTC-CGCATCTCTATCTTCATATTCT 2495
Query 684 TCACGATTACGACG-ATTATGATAAGATGTTCTTCTGTGAAA-GTGACCAAA-TTCTCA- 739
||| |||| | | | || ||||||||||||||||||| ||| | || || || | |
Sbjct 2496 TCATGATT-CAAGGGATAATGATAAGATGTTCTTCTGCCAAAAG-GATCAGTCTT-T-AG 2551
Query 740 TCAGGCAA-GTCCCTTGGTTGGTCT-TCAACTCGAATCTTTACTTTATCCCATCTCTATG 797
|| | ||| |||||||||||| | | |||| | ||| | |||||| | |||||||||||
Sbjct 2552 TC-GACAAAGTCCCTTGGTTGAT-TGTCAAAGCCAATGTCTACTTTGTTCCATCTCTATG 2609
Query 798 GTTGA-TCCCTTCTTTTCAGTCAGAATTAA-GCAAGCTATTCCCACAGAAAGAAACCGTC 855
||||| ||| |||| || | ||| ||| | ||||||||||| ||||||||| | |||
Sbjct 2610 GTTGAATCCAA-CTTTCCAAACCGAACTAATG-AAGCTATTCCCGCAGAAAGAAGCTGTC 2667
Query 856 TTTCACCAT-TTGGCTCG-CTATCTTTTTCACCCGACTAACCAAGTTTGGGGCAT-GATC 912
||||||||| ||| |||| | |||||||||| ||||| || ||||||||||| || ||||
Sbjct 2668 TTTCACCATCTTG-CTCGGC-ATCTTTTTCATCCGACGAATCAAGTTTGGGG-ATTGATC 2724
Query 913 ACAAGATCCTATAATGGTTATTTATCAAGAGCTGATGAGA-GACTTGGGATTCA-AGTAC 970
||||||||||| |||| || ||||||||||| || |||| | ||||| ||||| | |||
Sbjct 2725 ACAAGATCCTACAATGCCTACTTATCAAGAGCAGACGAGACG-CTTGGTATTCAGA-TAC 2782
Query 971 GAGTTTTT-AGCAAGCCG-GCTGGATATTTCCAACATGTCATGGACCAGATCTTAGCCTG 1028
| | | || ||||| | | ||||||||||| || ||||| ||||| ||| || |||| ||
Sbjct 2783 G-GATATTCAGCAATC-GAGCTGGATATTTTCAGCATGTAATGGATCAGGTCGTAGCTTG 2840
Query 1029 TACACAAAGAGAGAAACTATTACCTGAAGT-GTTTGTCTTA-GAA-A--CACAAGTCACT 1083
|||| ||||||||| || || |||||| | | | | | ||| | || |||||| |
Sbjct 2841 CACACGAAGAGAGAACCTTTTGCCTGAACCAGCT-G-CACAAGAAGAATCAAAAGTCAAT 2898
Query 1084 AACACATCAAGAAGCTC-GAAACTTAAAGCTGTTCTTGTCACTTCTCTT-TACCCAGAGT 1141
| | ||||||||| | ||| |||||||||||||||||||| ||| || || |||||||
Sbjct 2899 AT-A--TCAAGAAGC-CAGAAGCTTAAAGCTGTTCTTGTCACATCT-TTGTATCCAGAGT 2953
Query 1142 ACTCGGAGATTCT-AAGGCAA-ATGTATTGGAAAGGCCCGAGTTCAACAGGAGAGATAAT 1199
|||| || | || || | || ||||||||| || | ||||| |||||||| ||||| ||
Sbjct 2954 ACTCTGAAAC-CTTAAAG-AACATGTATTGGGAACGACCGAGCTCAACAGGGGAGATCAT 3011
Query 1200 ACAAATTTACCAACCAAGTCAAGAAATA-TATCAGCAAACAGACAATAAGCTTCATGACC 1258
|| ||||||| |||||| ||||| | ||| ||||||||||| |||||||| ||||
Sbjct 3012 TGAAGTTTACCAGCCAAGTGGAGAAAGGGT-TCAACAAACAGACAAGAAGCTTCACGACC 3070
Query 1259 AAAAGGCACTCGCTGAGATATATCT-CTTAAGTTTAACGGATTACATTGTCACGAGCGAC 1317
||||||||||||| ||||| ||||| || |||| |||| ||| |||||||||| |||| |
Sbjct 3071 AAAAGGCACTCGCCGAGATGTATCTTCT-AAGTCTAACTGATAACATTGTCACAAGCG-C 3128
Query 1318 TCG-TCTACGTTCGGATACGTTGCTCA-AGGTCTTGGAGGATTAAAGCCATGGATACTCT 1375
| ||||| || ||||| |||||||| || |||||||||||||||||||||| ||||||
Sbjct 3129 AAGGTCTACATTTGGATATGTTGCTCATAG-TCTTGGAGGATTAAAGCCATGGTTACTCT 3187
Query 1376 A-CAAGCCAA-AGAACCACACAGCTCCTGAGCCACCATGTGTTCG-TGCCGTGTCAATGG 1432
| || ||||| || || ||||||||||| ||||| ||| |||| | || ||||||||
Sbjct 3188 ATCA-GCCAACAGGTCCT-ACAGCTCCTGATCCACCGTGTATTCGAT-CCACGTCAATGG 3244
Query 1433 AGCCATGTTTCCTTA 1447
| || ||| |||||
Sbjct 3245 ACCCTTGTCACCTTA 3259
> Ahg906274 jgi|Araly1|906274|Al_scaffold_0003_3402
Length=1605
Score = 706 bits (382), Expect = 0.0
Identities = 1071/1390 (77%), Gaps = 102/1390 (7%)
Strand=Plus/Plus
Query 132 GGATAAACTGT-TAGGAGGGCTTTTAACAGCTGATTTTGATGAA-GATTCTTGCTTGAGT 189
||||||||| | |||||||||||||||| || ||||| |||||| || ||||||||||||
Sbjct 177 GGATAAACT-TATAGGAGGGCTTTTAACTGCGGATTTCGATGAAGGA-TCTTGCTTGAGT 234
Query 190 AGG--T-ATGAGTCTTCCTTGTATCGCAAGCCTTCACCATACAAACCATCCAG-ATATCT 245
||| | || | ||| |||||| ||||||||||| ||||| || || | | | ||||||
Sbjct 235 AGGTATCATAAAACTTTCTTGTACCGCAAGCCTTCCCCATATAAGCC-TTCTGAATATCT 293
Query 246 CGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAGCGTTGCGGTCCAGGCACAGAAGC 305
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||| ||||
Sbjct 294 CGTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAACGTTGCGGTCCAGATACAAAAGC 353
Query 306 TTACAA-GAAAGCAACGGAGATTCTTGGTCATGATGATGAGAATCATTCAACCAAATCTG 364
|||||| ||| ||||| |||| ||| ||| | |||||| || || ||| | || |
Sbjct 354 TTACAAAGAA-GCAACAGAGAAACTTAGTC--GC-GATGAGTATTATGCAAGCGAAGCAA 409
Query 365 TTGGTGAATGCAGATACATTGTGTGGATTGCTGTTTATGGGCTAGGAAACAGAATACTTA 424
||||||||| ||||||||||||||| | || | ||| ||||| ||||| ||| ||||||
Sbjct 410 ATGGTGAATGTAGATACATTGTGTGGGTCGCAGGTTACGGGCTTGGAAATAGATTACTTA 469
Query 425 CTCTTGCTTCTCTGTTTCTCTATGCTCTCTTGACTGACAGAATCATGCTTGTTGACCAAC 484
||||||||||| |||| ||||| ||||||||||| || |||||||| ||||||||| |||
Sbjct 470 CTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACCGAGAGAATCATTCTTGTTGAC-AAC 528
Query 485 -GTACGGACATAAGTGACCTCTTCTGTGAGCCTTTTCCAGGTACTTCCTGGCTACTCCCT 543
| | ||| | ||||| ||||| || ||||| || ||||||||||| ||| | || |||
Sbjct 529 CGCAAGGATGTTAGTGATCTCTTATGCGAGCCATTCCCAGGTACTTCATGGTTGCTTCCT 588
Query 544 CTGGATTTTCCACTAACAGA-TCA-A-TTA-GATAG---CTTCAACAAGGAAT-CTCCGC 595
|| || |||||| | || | | | ||| | | | || ||| ||||||| | || |
Sbjct 589 CTTGACTTTCCAATGTT-GAATTATACTTATGCTTGGGGCTACAATAAGGAATAC-CCTC 646
Query 596 GCTGTTACGGAACAATGTTG-AAGAATCATGCCATTAACTCAACTACAA-CAGAAAGCAT 653
| ||||| ||||||||| | || |||||| |||| ||||| ||| ||| | ||
Sbjct 647 GTTGTTATGGAACAATGGAGGAA-AATCATTCCATCAACTCGACTTCAATCCC---GCCC 702
Query 654 CATCCCCTCGTACCTCTGTCTTTATCTTATTCACGATTACGACG-ATTA-TGATAAGATG 711
|||| | ||| | | | | | || || |||| | | | || | ||||||| ||
Sbjct 703 CATC---TA-TACAT--G-CATAACCTC---CATGATT-CAAGGGAT-AGTGATAAGTTG 750
Query 712 TTCTTCTGTGAAA-GTGACCAAA-TTCTCATCAGGCAA-GTCCCTTGGTTGGTC-TTCAA 767
||| |||| ||| | || |||| || | ||| | ||| |||||||||||| | |||||
Sbjct 751 TTCATCTGCCAAAAG-GATCAAAGTT-TGATC-GACAAAGTCCCTTGGTTGATTGTTCAA 807
Query 768 -CTCGAATCTTTACTTTATCCCATCTCTATGGTTGA-TCCCTTCTTTTCAGTCAGAATTA 825
| | ||| |||||||| | |||||| ||||||| | ||| ||| || | ||| ||
Sbjct 808 GC-C-AATGTTTACTTTGTTCCATCTTTATGGTTCAATCCAAA-TTTCCAAACCGAACTA 864
Query 826 AGC-AAGCTATTCCCACAGAAAGAAACCGTCTTTCACCATTTGGCTCGCTATCTTTTTCA 884
| ||||| || || |||||||| ||||||||||||||||||||||| |||||||||||
Sbjct 865 -GTTAAGCTGTTTCCGCAGAAAGACACCGTCTTTCACCATTTGGCTCGGTATCTTTTTCA 923
Query 885 CCCGACTAACCAAGTTTGGGGCATGATCAC-AAGATCCTATAATGGTTATTTATC-AAGA 942
||||| || |||||||||| ||| |||| ||| | ||| ||| | ||||||| || |
Sbjct 924 TCCGACAAATCAAGTTTGGGATATGGTCACTAAG-TACTACGATGCTCATTTATCCAA-A 981
Query 943 GCTGATGAGAGACTTGGGATTCAAGTACGAGTTTTTAGCAAGCCGGCTGGATATTTCCAA 1002
|| || |||||||||||||||||| |||| |||||| |||| || |||||| |||||||
Sbjct 982 GCAGACGAGAGACTTGGGATTCAAATACGGGTTTTTGGCAAACCTTCTGGATTTTTCCAA 1041
Query 1003 CATGTCATGGACCA-GATCTTAGCCTGTACACAAAGAGAGAAACTATTACCTGAAGTGTT 1061
|||||||||||||| | || |||| ||||||||||| |||||||| || |||||| | ||
Sbjct 1042 CATGTCATGGACCAAG-TCGTAGCATGTACACAAAGGGAGAAACTGTTGCCTGAA-T-TT 1098
Query 1062 TG-T-CTTA-GAA-AC--ACAAGTCACTAACACATC-AAGAAGCTCGAAACTTAAAGCTG 1114
| | | | ||| | | |||||| | || ||| || || | |||||||||||||||
Sbjct 1099 -GCTACACAAGAAGAATTAAAAGTCA--A-CATATCGAA-AACCCCGAAACTTAAAGCTG 1153
Query 1115 TTCTTGTCACTTCTCTTTACCCAGAGTACTC-GG-AGATTCTAAGGCAA-ATGTATTGGA 1171
||||||| | ||||| || ||||||||||| || | | | ||| | || |||| || ||
Sbjct 1154 TTCTTGTGGCATCTCTCTATCCAGAGTACTCTGGCA-ACT-TAACG-AACATGTTTTCGA 1210
Query 1172 AAG-GCCCGAGTTCAACAGGAGAGATAATACAAATTTACCAACCAAGTCAAGAAATA-TA 1229
| | | || |||||||||||||| || | || |||| || |||||| ||||| | |
Sbjct 1211 A-GCGACCAAGTTCAACAGGAGAAATTGTTGAAGTTTATCAGCCAAGTGGAGAAAGAGT- 1268
Query 1230 TCAGCAAACAGACAATAAGCTTCATGACCAAAAGGCACTCGCTGAGATATATCTCTTAAG 1289
||||||||||||||| ||| | |||||||||||||| || ||||| || ||||| || ||
Sbjct 1269 TCAGCAAACAGACAAGAAGATACATGACCAAAAGGCGCTTGCTGAAATGTATCTTTTGAG 1328
Query 1290 TTTAACGGATTACATTGTCACGAGCGACTCG-TCTACGTTCGGATACGTTGCTCA-AGGT 1347
||||| ||| |||||||||| |||| | | ||||| || ||||| ||| || | || |
Sbjct 1329 CTTAACCGATAACATTGTCACAAGCG-CAAGGTCTACATTTGGATATGTTTCTTATAG-T 1386
Query 1348 CTTGGAGGATTAAAGCCATGGATACTCTA-CAAGCCAA-AGAACCACACAGCTCCTGAGC 1405
||||||||| ||| ||||||| |||| || || ||||| | || |||| ||||| | |
Sbjct 1387 CTTGGAGGACTAAGGCCATGGTTACTTTATCA-GCCAACA-AATTTCACAACTCCTAATC 1444
Query 1406 CACCATGTGTTCG-TGCCGTGTCAATGGAGCCATGTTTCCTTAGAGCTCCA-CTCTATGG 1463
| || |||||||| | || ||| ||||||||||||| ||||| |||| ||| ||||
Sbjct 1445 CGCCGTGTGTTCGAT-CCAAGTCGATGGAGCCATGTTACCTTACTCCTCCGTCTC-ATGG 1502
Query 1464 TTGTCAAGCT 1473
||| |||||
Sbjct 1503 ATGTGAAGCT 1512
> Ahg480406 jgi|Araly1|480406|fgenesh2_kg.3__3107__AT2G15390.2
Length=1783
Score = 691 bits (374), Expect = 0.0
Identities = 1066/1385 (77%), Gaps = 107/1385 (8%)
Strand=Plus/Plus
Query 132 GGATAAACTGTTAGGAGGGCTTTTAACAGCTGATTTTGATGAA-GATTCTTGCTTGAGTA 190
|||||||||| |||||||||||||||| || ||||| |||||| || |||||||||||||
Sbjct 287 GGATAAACTGATAGGAGGGCTTTTAACCGCGGATTTCGATGAAGGA-TCTTGCTTGAGTA 345
Query 191 GG--T-ATGAGTCTTCCTTGTATCGCAAGCCTTCACCATACAAACCATCCAG-ATATCTC 246
|| | || | || |||||| ||||||||||| |||||||| || ||| | |||||||
Sbjct 346 GGTATCATAAAAATTTCTTGTACCGCAAGCCTTCGCCATACAAGCCTTCC-GAATATCTC 404
Query 247 GTCTCTAAGCTTAGAAGCTATGAGATGCTTCACAAGCGTTGCGGTCCAGGCACAGAA-GC 305
||||||||||||||||||||||||||| ||||||| |||||||||||||| ||| || ||
Sbjct 405 GTCTCTAAGCTTAGAAGCTATGAGATGATTCACAAACGTTGCGGTCCAGGGACA-AATGC 463
Query 306 TTACAAGAAAGCAACGGAG-ATTCTTGGTCATGATGATGAGA--ATCATTCAACCAAATC 362
||||||||||||||| || || ||| |||||||||| || | || || ||| || |||
Sbjct 464 TTACAAGAAAGCAACAAAGCAT-CTTAGTCATGATGA-GA-ATTATAATGCAAGCAGATC 520
Query 363 TGTTGGTGAATGCAGATACATTGTGTGGATTGCTGTTTATGGGCTAGGAAACAGAATACT 422
| |||||||||| |||| |||||||| | || | ||| ||||| |||||| || ||||
Sbjct 521 AGATGGTGAATGCCGATATGTTGTGTGGCTCGCGGATTACGGGCTTGGAAACCGACTACT 580
Query 423 TACTCTTGCTTCTCTGTTTCTCTATGCTCTCTTGACTGACAGAATCATGCTTGTTGACCA 482
|||||||||||| |||| ||||| |||||||||||||| |||||||| ||||||||| |
Sbjct 581 CACTCTTGCTTCTGTGTTCCTCTACGCTCTCTTGACTGATAGAATCATTCTTGTTGAC-A 639
Query 483 AC-GTACGGACATAAGTGACCTCTTCTGTGAGCCTTTTCCAGGTACTTCCTGGCTACTCC 541
|| | | ||| || |||| ||||| || ||||| |||||||||||||| ||| | || |
Sbjct 640 ACCGGAAGGATATTGGTGATCTCTTATGCGAGCCATTTCCAGGTACTTCATGGTTGCTTC 699
Query 542 CTCTGGATTTTCCACTAACAGATCAAT-TAGATA-GCTT-CAACAAGGAAT-CTCCGCGC 597
|||| || |||||| | | || ||| || || | | ||||||||||| | || ||
Sbjct 700 CTCTTGACTTTCCATTGAT-GA--AATATACTTATGGATACAACAAGGAATAC-CCTCGT 755
Query 598 TGTTACGGAACAATGTTG-AAGAATCATGCCATTAACTCAACTACAA-CAGAAAGCATCA 655
||||| ||||||||| | || |||||| |||| ||||| ||| ||| | | | |||
Sbjct 756 TGTTATGGAACAATGGAGGAA-AATCATTCCATCAACTCGACTTCAATCCCAC--C-TCA 811
Query 656 TCCCCTCGTACCTCTGTCTTTATCTTATTCACGATTACGACG-ATTA-TGATAAGATGTT 713
|| | || ||| | | | || || |||| | | | || | ||||||||||||
Sbjct 812 TC---TA-TA--TCTA-CATAACCTC---CATGATT-CAAGGGAT-AGTGATAAGATGTT 859
Query 714 CTTCTGTGAAA-GTGACCAAA-TTCTCATCAGGCAA-GTCCCTTGGTTGGTCTTCA-A-C 768
|||||| ||| | || |||| || | || | ||| |||||||||||| | || | | |
Sbjct 860 CTTCTGCCAAAAG-GATCAAAGTT-TGATT-GACAAAGTCCCTTGGTTGATTTTTAGAGC 916
Query 769 TCGAATCTTTACTTTATCCCATCTCTATGGTTGA-TCCCTTCTTTTCA-GTCAGAATTAA 826
| ||| |||||||| | |||||| ||||||| | ||| | || || | | ||| |||
Sbjct 917 -C-AATGTTTACTTTGTTCCATCTTTATGGTTTAATCCAA-CATTCCAAGCC-GAACTAA 972
Query 827 GC-AAGCTATTCCCACAGAAAGAAACCGTCTTTCACCATTTGGCTCGCTATCTTTTTCAC 885
| ||||| || || ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 973 -CTAAGCTGTTTCCGCAGAAAGAAACCGTCTTTCACCACTTGGCTCGGTATCTTTTTCAC 1031
Query 886 CCGACTAACCAAGTTTGGGGCAT-GATCAC-AAGATCCTATAATGGTTATTTATC-AAGA 942
|| | || |||||||||| || | |||| ||| | |||| ||| | | ||||| || |
Sbjct 1032 CCCAAAAATCAAGTTTGGGATATCG-TCACTAAG-TACTATCATGATCACTTATCCAA-A 1088
Query 943 GCTGATGAGAGACTTGGGATTCAAGTACGAGTTTTTAGCAAGCC-GGCTGGATATTTCCA 1001
|| || |||||||| ||||||||| | ||||| ||| || | | || |||||| | |||
Sbjct 1089 GCAGAGGAGAGACTCGGGATTCAAATTCGAGTCTTTCGCGATCAAGG-TGGATACTACCA 1147
Query 1002 ACATGTCATGGACCA-GATCTTAGCCTGTACACAAAGAGAGAAACTATTACCTGAAGTGT 1060
||| ||||||||||| | || || | || ||||||||||||||||| || |||||| |||
Sbjct 1148 ACACGTCATGGACCAAG-TCATATCATGCACACAAAGAGAGAAACTTTTGCCTGAATTGT 1206
Query 1061 TTGTCTTA-GAA-A--CACAAGTCACTAACACATC-AAGA-AGCTCGAAACTTAAAGCTG 1114
| | | ||| | || |||||| | || ||| || | | | | |||||||||||||
Sbjct 1207 CTA-CACAAGAAGAATCAAAAGTCA--A-CATATCGAACACA-C-CAAAACTTAAAGCTG 1260
Query 1115 TTCTTGTCACTTCTCTT-TAC-CCAGAGTACTCGGAGATTCTA-AGGCAA-ATGTATTGG 1170
|||||||||||||| || | | || |||||||| | | ||| || || |||| ||
Sbjct 1261 TTCTTGTCACTTCT-TTGT-CTCCTGAGTACTCTAAAAAACTAGAG--AACATGTTTTC- 1315
Query 1171 AAAG-GCCCGAGTTCAACAGGAGAGATAATACAAATTTACCAACCAAGTCAAGAAATATA 1229
| || | | | || ||||||||||| || || |||| || |||||| ||||| ||
Sbjct 1316 AGAGCGATCAAATTTGACAGGAGAGATTATTGAAGTTTATCAGCCAAGTGGAGAAAGGTA 1375
Query 1230 TCAGCAAACAGACAATAAGCTTCATGACCAAAAGGCACTCGCTGAGATATATCTCTTAAG 1289
||| ||||||||||| |||| || ||||||||||| || |||||||| ||||| || ||
Sbjct 1376 TCAACAAACAGACAAGAAGCAACACGACCAAAAGGCGCTTGCTGAGATGTATCTTTTGAG 1435
Query 1290 TTTAACGGATTACATTGTCACGAGCGACTCG-TCTACGTTCGGATACGTTGCTCA-AGGT 1347
||||| ||| ||||||| || ||| | | ||||| || ||||| |||||| | || |
Sbjct 1436 CTTAACCGATAACATTGTTACAAGCT-CAAGGTCTACATTTGGATATGTTGCTTATAG-T 1493
Query 1348 CTTGGAGGATTAAAGCCATGGATACTCTA-CAAGCCAAA-GAAC-CACACAGCTCCTGAG 1404
||||||| ||||||||||||| |||| || | |||||| || | || | |||||||||
Sbjct 1494 CTTGGAGCATTAAAGCCATGGTTACTTTATCT-GCCAAATGATCTCA-A-AGCTCCTGAT 1550
Query 1405 CCACCATGTGTTCG-TGCCGTGTCAATGGAGCCATGTTTCCTTAGAGCTCC-ACTCTATG 1462
|| || |||||||| | || ||| |||||||| |||||||||| |||| |||| |||
Sbjct 1551 CCGCCGTGTGTTCGAT-CCACGTCGATGGAGCCTTGTTTCCTTACTCCTCCGACTC-ATG 1608
Query 1463 GTTGT 1467
| |||
Sbjct 1609 GATGT 1613
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 58087623625
Database: halleri_transcript_ahg.fa
Posted date: Sep 25, 2014 2:02 AM
Number of letters in database: 38,939,717
Number of sequences in database: 32,672
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5