BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: halleri_transcript_ahg.fa 32,672 sequences; 38,939,717 total letters Query= AT1G14640.1 Length=2208 Score E Sequences producing significant alignments: (Bits) Value Ahg911261 jgi|Araly1|911261|Al_scaffold_0001_1515 3000 0.0 Ahg313937 jgi|Araly1|313937|fgenesh1_pm.C_scaffold_1002717 2316 0.0 Ahg922541 jgi|Araly1|922541|scaffold_103822.1 303 3e-81 > Ahg911261 jgi|Araly1|911261|Al_scaffold_0001_1515 Length=2337 Score = 3000 bits (1624), Expect = 0.0 Identities = 2047/2244 (91%), Gaps = 58/2244 (3%) Strand=Plus/Plus Query 1 ATGTTCAATTCGATGAAGATACTACCACTGGAGGCTCCTCCTGCTGACGGGAATTTAGGT 60 ||||||||||||||| ||||||| |||||||||||||||||||||||||| || ||||| Sbjct 1 ATGTTCAATTCGATGCAGATACTGCCACTGGAGGCTCCTCCTGCTGACGGTAACCTAGGT 60 Query 61 CCACTTCCTCCGTCGCAATTAACGGATGAAGAAATCAAAGAGAATGAGTTTCAAGGAGAG 120 |||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||| Sbjct 61 CCACTTCCTCCGTCGCAATTAACGGATGAAGAAATCAAAGAGAAAGAGTTGCAAACAGAG 120 Query 121 CAAAACAATTCAATTCAAACTCCCATAGCTGTGGCTACTCATACGAATCCAATCGGAATC 180 |||||| |||||||||| ||| |||||||||||||||||||||||| | ||||||||| Sbjct 121 AAAAACATTTCAATTCAAGCTCACATAGCTGTGGCTACTCATACGAAGACTATCGGAATC 180 Query 181 ATTTATCCACCTCCAGAGATCCGAAAAATCGTCGAGACAACGGCTCAATTTGTTTCGCAA 240 |||||||||||||| || ||| ||||||||||||||||||||||||| |||||||||||| Sbjct 181 ATTTATCCACCTCCTGATATCAGAAAAATCGTCGAGACAACGGCTCATTTTGTTTCGCAA 240 Query 241 AACGGTTTGGCGTTTGGAAACAAAGTTAAAACAGAGAAAGCCAATAATGCTAATTTCAGC 300 |||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||| | Sbjct 241 AACGGTTTAGAGTTTGAAAACAAAGTTAAAACAGAGAAAGCCAATAACCCTAATTTCAAC 300 Query 301 TTTTTGAAAAGTGATAATCCTTATCATGGCTTTTACCGGTACAAGGTCACTGAGTA-TAG 359 |||||||||||||||||||||||||||| |||||||| | ||||| || ||||||| | | Sbjct 301 TTTTTGAAAAGTGATAATCCTTATCATGCCTTTTACCAGCACAAGATCGCTGAGTACT-G 359 Query 360 TTG-TCATATTCGTGACGGAGCTCAAGGTACTGATGTAGATGATACAGAAGAT-CCCAA- 416 || ||| ||||| ||||||||||||||||||||| | ||||||||||||||| ||||| Sbjct 360 -TGCTCAGATTCGAGACGGAGCTCAAGGTACTGATTTTGATGATACAGAAGATCCCCAAC 418 Query 417 ---A--------C-T-TGATGATGAGTCTGATGCAAAACCTGACCTTCAGGCTCAATTTA 463 | | | || |||||||||| ||||||||||||||||||||| |||||||| Sbjct 419 TTGATCCTGCTGCTTCTGCTGATGAGTCTCATGCAAAACCTGACCTTCAGGATCAATTTA 478 Query 464 GGGCTCCTCGTAAGATTTTAGAAGCACCTGAACCTGAGAAGTATACTGTTAGACTTCCTG 523 ||| ||||||||||| ||||||||| ||||||||||| |||||||| |||||||||||| Sbjct 479 GGGTTCCTCGTAAGACTTTAGAAGCTCCTGAACCTGACAAGTATACAGTTAGACTTCCT- 537 Query 524 A-AGGGATCATGGAGGCTGAGCTTGATATTATTAAGCACACGGCGCAGTTTGTGGCGCGG 582 | |||||||||||||| |||||||||||||||||||| || |||||||||||||||||| Sbjct 538 ATAGGGATCATGGAGGAGGAGCTTGATATTATTAAGCATACAGCGCAGTTTGTGGCGCGG 597 Query 583 AATGGTCAATCGTTTTTAAGGGAATTGATGCGTAGAGAGGTGAATAATTCTCAGTTTCAG 642 ||||| |||| |||||||||| ||||||| |||||||| |||| ||| ||||||||||| Sbjct 598 AATGGGGAATCCTTTTTAAGGGGATTGATGAGTAGAGAGATGAACAATACTCAGTTTCAG 657 Query 643 TTTATGAAGCCAACACATAGTATGTTCACTTTTTTCACTTCTTTGGTTGATGCGTATTCT 702 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 658 TTTATGAAGCCAACACATAGTATGTTCACTTTTTTCACTTCTCTGGTTGATGCGTATTCA 717 Query 703 GAAGTATTGATGCCTCCCAGAGATTTGAAAGAAAAGCTGAGAAAGAGTGTTGCTGATTTG 762 ||||| || |||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct 718 GAAGTTTTAATGCCTCCCAGAGACTTGAAAGAAAAGCTGAGAAAGAGTGTGGCTGATTTG 777 Query 763 ACGACTGTTCTCGAGCGTTGTTTGAATCGGCTTGAGTGGGATCGTTTCCaggaggaggag 822 ||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||||| Sbjct 778 ACGACTGTTCTTGAGCGTTGTTTGAATCGGCTTGAATGGGATCGTTCCCAGGAGGAGGAG 837 Query 823 aagaacaaagaagaggatgagaaagagaaggagagagTGCAGATGG-TTATGATTGATTG 881 | ||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||| Sbjct 838 AGGAAGAAAGAAGAGGATGAGAAAGAGAAGGAGAGAGTGCATATGGCTT-TGATTGATTG 896 Query 882 GAAAGATTTTGCAGTTGTTGAGTCTATAGATTTTGCAGACGAGGAGGATAAAGATTTGCC 941 | | |||||||||||||||||||| |||||||||| ||||||||| ||| |||| |||| Sbjct 897 GCATGATTTTGCAGTTGTTGAGTCGATAGATTTTGTAGACGAGGAAGATGAAGAGATGCC 956 Query 942 AATGCCTATGACACTTGAGGAGGTTATTAGGAGGAGCAAAGTTTCAGCCATGGAAGAAGA 1001 ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct 957 AATGCCTATGACACTTGAGGAGGTTATAAGGAGGAGCAAAGTATCAGCCATGGAAGAAGA 1016 Query 1002 TGAAATTGTTGAGCCTGGAAAGGAAGTTGAGATGGATATGGATGAAGAAGAAGTTAAGCT 1061 |||||||||||||||||||||||| ||||| ||||| ||||||||||||||||||||||| Sbjct 1017 TGAAATTGTTGAGCCTGGAAAGGAGGTTGAAATGGAAATGGATGAAGAAGAAGTTAAGCT 1076 Query 1062 TGTTGCAGAAGGAATGAGAGCAGCGAACCTGGAAGAGTATGTTGGCTCTGTGGAGA-T-- 1118 |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| | Sbjct 1077 TGTTGCAGAAGGAATGAGAGCAGCAAACCTAGAAGAGTATGTTGGCTCTGTGGAGATTGA 1136 Query 1119 ---TG-A-A----GAAGAAGCACCAATGAGAATTGTTAAGAACTGGAAGAGGCCTGAAGA 1169 || | | ||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 1137 AAATGTACACTGTGAAGAAGCACCAATGAGAATTGTTAAGAACTGGAAGAGGCCAGAAGA 1196 Query 1170 TAGGTTTCTGACAGAGAGAGATTCGAGTAAAGTTGTTATATCACGGATTACTGGTGAGCT 1229 |||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 1197 TAGGTTTCTGACAGAGAGAGATTCGAGTAAAGTTGTTATATCACCAATCACTGGTGAGCT 1256 Query 1230 GATTCCCATTACCGAGATGTCTGAGCACATGAGGATTTCTCTTATTGATCCTAAGTTTAA 1289 ||||||||||| |||||||||||||||||| ||||||| ||||| ||||||||||| || Sbjct 1257 CATTCCCATTACAGAGATGTCTGAGCACATGCGGATTTCACTTATCGATCCTAAGTTCAA 1316 Query 1290 AGAACAGAAGGATCGGATGTTTGCTAAGATTCGTGAGACAACTCTCGCACAAGATGATGA 1349 ||| ||||| ||||||||||||||||||||||||||||| || || |||||||||||||| Sbjct 1317 AGAGCAGAAAGATCGGATGTTTGCTAAGATTCGTGAGACCACACTTGCACAAGATGATGA 1376 Query 1350 GATTGCTAAAAACATTGTCGGGTTGGCCCGCCTCCGTCCTGATATCTTTGGAACAACAGA 1409 ||||||||||||||| |||||||||||||| || ||||||||||||||||||||||| || Sbjct 1377 GATTGCTAAAAACATAGTCGGGTTGGCCCGTCTGCGTCCTGATATCTTTGGAACAACGGA 1436 Query 1410 AGAAGAAGTTTCAAATGCTGTAAAAGCAGATATTGAGAAAAAAGATGAGCAACCGAAACA 1469 ||||||||| |||||||||||||||||||| |||||||| |||||||||||||| ||||| Sbjct 1437 AGAAGAAGTCTCAAATGCTGTAAAAGCAGAGATTGAGAAGAAAGATGAGCAACCAAAACA 1496 Query 1470 AGTAATATGGGATGGTCACACTGGAAGTATTGGTCGCACAGCAAACCAAGCCTTGACTCA 1529 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1497 AGTAATATGGGATGGTCACACTGGAAGTATTGGTCGCACAGCAAACCAAGCCTTGACTCA 1556 Query 1530 GAACTCCAATGGAGAGCAAGGCGATGGCGTTTATGGTGATCCCAATAGCTTCCCTGGTCC 1589 |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1557 GAACTCAAATGGAGAGCAAGGCGATGGAGTTTATGGTGATCCCAATAGCTTCCCTGGTCC 1616 Query 1590 AGCTGCTTTTCCTCCTCCTCGACCAGGTGTCCCAACTGTCCGGCCACTGCCACCACCTCA 1649 ||| ||| |||||||||||||||||||||||||||| ||||||||| |||||||||||| Sbjct 1617 AGCCGCTCTTCCTCCTCCTCGACCAGGTGTCCCAACAGTCCGGCCATTGCCACCACCTCC 1676 Query 1650 AAATCTCGCCTTGAACCTTCCTCGTCCTCCTCCTTCTGTTCAGTACCCTGGTGCACCAAG 1709 ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| Sbjct 1677 TAATCTCGCCTTGAACCTCCCTCGTCCTCCTCCTTCTGTTCAGTACCTTGGTGCACCAAG 1736 Query 1710 GCCATTAGGTGTTCCAATGATGCAGCCCATGTATCAACAACACCAGCTCTCTATGTCTGG 1769 ||||||||||| ||| ||||| |||||||||||||||||||| |||||||| ||| |||| Sbjct 1737 GCCATTAGGTGATCCGATGATTCAGCCCATGTATCAACAACATCAGCTCTCGATGCCTGG 1796 Query 1770 GCCACATGGACATCCTTCAATGATGATG-AGTCGACCACCACAAATGCAACCTGTTATGC 1828 |||||||||||| ||||| ||||||||| | || ||||||||||||||| |||||||||| Sbjct 1797 GCCACATGGACACCCTTCGATGATGATGCA-TCCACCACCACAAATGCAGCCTGTTATGC 1855 Query 1829 GTGTGCCGCCTCCACCGGGATCTCAGTTTTCTCATATGCAAGTTCCTCAACCTTATGGTC 1888 ||||||| |||||||||||||||||||| || | | |||||||||||| Sbjct 1856 ATGTGCCGTCTCCACCGGGATCTCAGTTT--------GC---T-C---AACCTTATGGTC 1900 Query 1889 AGCTTCCACCGCTTTCGATGGGGATGATGCA-----ACC-ACCACCTATGGCTGAGATGC 1942 |||||||||||| |||||||||||||||||| ||| |||||||||| |||| |||| Sbjct 1901 AGCTTCCACCGCATTCGATGGGGATGATGCACGTGCACCCACCACCTATGCCTGAAATGC 1960 Query 1943 CTCCTCCTCCACCACCCGGGGAGGCACCACCGCCTCTTCCTGAGGAGCCAGAGCCAAAAA 2002 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 1961 CTCCTCCACCACCACCCGGGGAGGCACCACCGCCTCTTCCTGAGGAGCCAGAGCCAAAGA 2020 Query 2003 GACAGAAGCTCGATGAGTCAGCCCTTGTTCCAGAAGACCAGTTTCTTGCTCAGCATCCGG 2062 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2021 GACAAAAGTTCGTTGAGTCAGCCCTTGTTCCAGAAGACCAGTTTCTTGCTCAGTATCCGG 2080 Query 2063 GTCCGGCTACAATCAGGGTTTCTAAGCCAAACGAGAATGATGGACAAGTCATGGAGATCA 2122 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2081 GTCCGGCTACAATCAGGGTTTCTAAGCCAAACGAGAATGATGGACAAGTCATGGAGATCA 2140 Query 2123 CAGTGCAGTCGTTATCCGAAAACGTGGGAAGTTTGAAGGAGAAAATAGCTGGGGAAATGC 2182 |||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||| Sbjct 2141 CAGTGCAGTCGTTATCCGAAAATGTGGGAAGTTTGAAGGAGAAAATAGCTGGAGAGATGC 2200 Query 2183 AAATTCCAGCAAACAAACAGAAGT 2206 |||||||||||||||||||||||| Sbjct 2201 AAATTCCAGCAAACAAACAGAAGT 2224 > Ahg313937 jgi|Araly1|313937|fgenesh1_pm.C_scaffold_1002717 Length=2337 Score = 2316 bits (1254), Expect = 0.0 Identities = 1926/2244 (86%), Gaps = 71/2244 (3%) Strand=Plus/Plus Query 10 TCGATGAAGATACTACCACTGGAGGCTCCTCCTGCTGACGGGAATTTAGGTCCACTTCCT 69 |||||| ||||||| |||||||||||||||||| | |||||||| ||||||||||||||| Sbjct 10 TCGATGCAGATACTGCCACTGGAGGCTCCTCCTACCGACGGGAAGTTAGGTCCACTTCCT 69 Query 70 CCGTCGCAATTAACGGATGAAGAAATCAAAGAGAAT-GAGTTTCAAGGAGAGCAAAACAA 128 |||||||||||||| ||| | ||| || ||||| || ||||| |||| |||||||||||| Sbjct 70 CCGTCGCAATTAACTGATCAGGAAGTCGAAGAG-ATGGAGTTGCAAGCAGAGCAAAACAA 128 Query 129 TTCAATTCAAACTCCCATAGCTGTGGCTACTCATACGAA-TCCAATCGGAATCATTTATC 187 ||||| |||| |||| ||||| || ||||| || || | || ||||| ||| ||| Sbjct 129 TTCAAATCAAGCTCCGGCGGCTGTTGCGACTCACAC-AAGGACTATTGGAATTATTCATC 187 Query 188 CACCTCCAGAGATCCGAAAAATCGTCGAGACAACGGCTCAATTTGTTTCGC-AAAACGGT 246 |||||||||| ||| ||| || || |||| ||||||||| |||||||| | ||||||| Sbjct 188 CACCTCCAGATATCAGAACTATTGTTGAGAAAACGGCTCAGTTTGTTTC-CAAAAACGGG 246 Query 247 TTGGCGTTTGGAAACA-AAG-TTAAAACAGAG-AAAGCCAATAATGCTAATTTCAGCTTT 303 |||| |||| |||| | | | || | || || | || ||||| || |||| |||| Sbjct 247 TTGGAGTTT-GAAA-AGAGGATT-ATTGTTAGTAATGAAAAGAATGCCAAGTTCAACTTT 303 Query 304 TTGAAAAG-TGATAATCCTTATCATGGCTTTTACCGGTACAAGGTCACTGAGTATAGTTG 362 ||||| || | | |||||||||||| |||||||| | ||||| ||||||| || | || Sbjct 304 TTGAAGAGCTCA-GATCCTTATCATGCCTTTTACCAGCACAAGCTCACTGAATACCG-TG 361 Query 363 -TCA-TATTCGTGACGGAGCTCA-A-GGTACTGAT-GT--AGATGATACAGAAGATCCCA 415 ||| | | ||| || ||| | ||||| ||| | | |||||| | | | | Sbjct 362 CTCAGGGTAC-TGA-TGA-TTCAGATGGTACAGATCTTCAACTTGATACTGCTGCT-GCT 417 Query 416 AACTTGATG-ATGAGTC---TGATGCAAAACCTGACCTTCAGGCTCAATTTAGGGCTCCT 471 | ||| | |||| | ||||||| |||| || ||||||||||| |||||| |||| Sbjct 418 GA--TGA-GTCTGAGGCAGGTGATGCACAACCCGATCTTCAGGCTCAGTTTAGGATTCCT 474 Query 472 CGTAAGATTTTAGAAGCACCTGAACCTGAGAAGTATACTGTTAGACTTCCTGAAGGGATC 531 | |||| | ||||| | || || |||||||||||||| ||||||||||||||||||||| Sbjct 475 CCTAAGCCTCTAGAACCTCCGGAGCCTGAGAAGTATACAGTTAGACTTCCTGAAGGGATC 534 Query 532 ATGGAG-GCTGAGCTTGATATTATTAAGCACACGGCGCAGTTTGTGGCGCGGAATGGTCA 590 | || | | ||||||||||||||||||| || || ||||||||||| |||||||| | Sbjct 535 ACGG-GCGAGGAGCTTGATATTATTAAGCTTACAGCACAGTTTGTGGCACGGAATGGGAA 593 Query 591 ATCGTTTTTAA-GGGAATTGATGCGTAGAGAGGTGAATAATTCTCAGTTTCAGTTTATGA 649 ||||||||||| ||| ||||| | ||||||| | || ||| |||||||||||||||||| Sbjct 594 ATCGTTTTTAACGGG-ATTGACGAGTAGAGAAATCAACAATCCTCAGTTTCAGTTTATGA 652 Query 650 AGCCAACACATAGTATGTTCACTTTTTTCACTTCTTTGGTTGATGCGTATTCTGAAGTAT 709 ||||||||||||| |||||||||||||| |||||| |||||||||||||||| ||||| | Sbjct 653 AGCCAACACATAGCATGTTCACTTTTTTTACTTCTCTGGTTGATGCGTATTCAGAAGTTT 712 Query 710 TGATGCCTCCCAGAGATTTGAAAGAAAAGCTGAGAAAGAGTGTTGCTGATTTGACGACTG 769 | |||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 713 TAATGCCTCCCAAAGATTTGAAAGAAAAGCTGAGAAAGAGTGTTGCTGATTTGACTACTG 772 Query 770 TTCTCGAGCGTTGTTTGAATCGGCTTGAGTGGGATCGTTTC-Caggaggaggagaagaac 828 |||| |||||||||||| |||| ||||| |||||||| ||| |||||| || ||||||| Sbjct 773 TTCTTGAGCGTTGTTTGCATCGTCTTGAATGGGATCG-TTCTCAGGAGCAGCAGAAGAAG 831 Query 829 aaagaagaggatgagaaagagaaggagagagTGCAGATGGTTATGATTGATTGGAAAGAT 888 ||||||||||||||||||||| |||| |||||||||||| ||||||||||||| | ||| Sbjct 832 AAAGAAGAGGATGAGAAAGAGCTGGAGCGAGTGCAGATGGCTATGATTGATTGGCATGAT 891 Query 889 TTTGCAGTTGTTGAGTCTATAGATTTTGCAGACGAGGAGGATAAAGATTTGCCAATGCCT 948 |||| || |||||||| ||||||||||| |||||||| ||| |||| || ||| |||| Sbjct 892 TTTGTGGTGGTTGAGTCGATAGATTTTGCGGACGAGGAAGATGAAGAGTTACCACCGCCT 951 Query 949 ATGACACTTGAGGAGGTTATTAGGAGGAGCAAAGTTTCAGCCATGGAAGAAGATGAAATT 1008 ||||||||||| |||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct 952 ATGACACTTGACGAGGTTATAAGGAGGAGCAAAGCATCAGCCATGGAAGAAGATGAAATT 1011 Query 1009 GTTGAGCCTGGAAAGGAAGTTGAGATGGATATGGATGAAGAAGAAGTTAAGCTTGTTGCA 1068 ||||||||||||||||| || || ||||| ||||| |||||||||||||||||||| ||| Sbjct 1012 GTTGAGCCTGGAAAGGAGGTCGAAATGGAAATGGACGAAGAAGAAGTTAAGCTTGTCGCA 1071 Query 1069 GAAGGAATGAGAGCAGCGAACCTGGAAGAGTATGTT-GGCTCTG----TGGAGATTGAAG 1123 ||||||||||||||||| ||||| |||||| ||||| | | || || | | ||| | Sbjct 1072 GAAGGAATGAGAGCAGCAAACCTAGAAGAGAATGTTAAGAT-TGAAAATGTACA-TGATG 1129 Query 1124 AAGAAGCACCAATGAGAATTGTTAAGAACTGGAAGAGGCCTGAAGATAGGTTTCTGACAG 1183 |||||||||| ||||||||||||||||||||||||||||| ||||| ||| | | |||| Sbjct 1130 AAGAAGCACCTATGAGAATTGTTAAGAACTGGAAGAGGCCAGAAGACAGGATCCCAACAG 1189 Query 1184 AGAGAGATTCGAGTAAAGTTGTTATATCACGGATTACTGGTGAGCTGATTCCCATTACCG 1243 |||||||| | | |||||||||| |||||| |||||||| |||||||||||||| | || Sbjct 1190 AGAGAGATCCAACTAAAGTTGTTGTATCACCAATTACTGGCGAGCTGATTCCCATCAACG 1249 Query 1244 AGATGTCTGAGCACATGAGGATTTCTCTTATTGATCCTAAGTTTAAAGAACAGAAGGATC 1303 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1250 AGATGTCTGAGCACATGAGGATTTCTCTTATTGATCCTAAGTTCAAAGAACAGAAGGATC 1309 Query 1304 GGATGTTTGCTAAGATTCGTGAGACAACTCTCGCACAAGATGATGAGATTGCTAAAAACA 1363 |||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||| Sbjct 1310 GGATGTTTGCTAAGATTCGTGAAACCACTCTTGCACAAGATGATGAGATTGCTAAAAACA 1369 Query 1364 TTGTCGGGTTGGCCCGCCTCCGTCCTGATATCTTTGGAACAACAGAAGAAGAAGTTTCAA 1423 | ||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||| Sbjct 1370 TAGTCGGGTTGGCCCGCCTGCGTCCGGATATCTTTGGAACAACAGAAGAAGAAGTCTCAA 1429 Query 1424 ATGCTGTAAAAGCAGATATTGAG-A-AA-AAAGATGAGCAACCGAAACAAGTAATATGGG 1480 |||||||||||||||| |||||| | || ||||||||||| || || ||||| ||||||| Sbjct 1430 ATGCTGTAAAAGCAGAGATTGAGAAGAAGAAAGATGAGCAGCCCAAGCAAGTGATATGGG 1489 Query 1481 ATGGTCACACT-GGAAGTATTGGTCGCACAGCAAACCAAGCCTTGACTCAGAACTCCAAT 1539 ||||||||| | |||||||||||||||||||||||||||||||||||||||||| | ||| Sbjct 1490 ATGGTCACA-TAGGAAGTATTGGTCGCACAGCAAACCAAGCCTTGACTCAGAACGCTAAT 1548 Query 1540 -G-GA-GAGCAAGGCGATGGCGTTTATGGTGATCCCAATAGCTTCCCTGGTCCAGCTGCT 1596 | || |||||||| ||||||||||| || |||||||||||||||||||||||||||||| Sbjct 1549 GGAGAGGAGCAAGGTGATGGCGTTTACGGAGATCCCAATAGCTTCCCTGGTCCAGCTGCT 1608 Query 1597 TTTCCTCCTCCTCGACCAGGTGTCCCAACT-GTCCGGCCACTGCCACCACCTCAAAATCT 1655 ||||||||||||||||||||||||||| | ||||| ||| | ||||| |||| ||||| Sbjct 1609 CTTCCTCCTCCTCGACCAGGTGTCCCAA-TAGTCCGACCATTACCACCCCCTCCTAATCT 1667 Query 1656 CGCCTTGAACCTTCCTCGTCCTCCTCCTTCTGTTCAGTACCCTGGTGCACCAAGGCCATT 1715 |||| ||||||| ||||||||||| ||||||| ||||||||| ||||||||||||||||| Sbjct 1668 CGCCCTGAACCTCCCTCGTCCTCCCCCTTCTGCTCAGTACCCCGGTGCACCAAGGCCATT 1727 Query 1716 AGGTGTTCCAATGATGCAGCCCATGTATCAACAACACCAGCTCTCTATGTCTGGGCCA-C 1774 ||||||||| |||||||| || ||| |||||||||||||| |||| ||| | |||||| | Sbjct 1728 AGGTGTTCCGATGATGCAACCTATGCATCAACAACACCAGTTCTCGATGCCGGGGCCACC 1787 Query 1775 ATGGACATCCTTCA-ATGATGATGAGTCGACCACCACA-A--AT-GCA-A-CCTGTTATG 1827 | ||||| || || |||||||||| ||||||||||| | || ||| | |||| |||| Sbjct 1788 A-GGACAGCC-GCAGATGATGATGAACCGACCACCACAGATGATGGCACAGCCTGGTATG 1845 Query 1828 CGTGTGCCGCCTCCACCGGGATCTCAGTTTTCTCATATGCAAGTTCCTCA-ACCTTATGG 1886 | |||||| ||||||||||||||||||||| ||| ||||||| ||||| | ||||||||| Sbjct 1846 CATGTGCCACCTCCACCGGGATCTCAGTTTGCTCCTATGCAAATTCCT-AGACCTTATGG 1904 Query 1887 TCAGCTTCCACCGCT-TTCGATGGGGATGATGCAACCACCACCTATGGCTGAGATGCCTC 1945 ||||||||||||| | | | ||||||||||||||||||||||||||| ||| |||| ||| Sbjct 1905 TCAGCTTCCACCG-TCTGCAATGGGGATGATGCAACCACCACCTATGCCTGGGATGGCTC 1963 Query 1946 CTCCTCCACCACCCGGGGAGGCACCACCGCCTCTTCCTGAGGAGCCAGAGCCAAAAAGAC 2005 |||||||||| | | |||||||||||| |||||||||||||| ||||||||||| |||| Sbjct 1964 CTCCTCCACCTCATGAGGAGGCACCACCTCCTCTTCCTGAGGAACCAGAGCCAAAGAGAC 2023 Query 2006 AGAAGCTCGATGAGTCAGCCCTTGTTCCAGAAGACCAGTTTCTTGCTCAGCATCCGGGTC 2065 | ||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2024 AAAAGTTCGACGAGTCAGCCCTTGTTCCAGAAGACCAGTTTCTTGCTCAGCATCCGGGTC 2083 Query 2066 CGGCTACAATCAGGGTTTCTAAGCCAAACGAGAATGATGGACAAGTCATGGAGATCACAG 2125 ||||||||||||||||||||| |||||||| | ||||||| |||||||| |||||||||| Sbjct 2084 CGGCTACAATCAGGGTTTCTATGCCAAACGTGGATGATGGGCAAGTCATTGAGATCACAG 2143 Query 2126 TGCAGTCGTTATCCGAAAACGTGGGAAGTTTGAAGGAGAAAATAGCTGGGGAAATGCAAA 2185 ||||||| |||||||||||||||||||||||||||||||||||||||||||| || |||| Sbjct 2144 TGCAGTCATTATCCGAAAACGTGGGAAGTTTGAAGGAGAAAATAGCTGGGGAGATACAAA 2203 Query 2186 TTCCAGCAAACAAACAGAAG-TAA 2208 |||||||||||||||||||| ||| Sbjct 2204 TTCCAGCAAACAAACAGAAGATAA 2227 > Ahg922541 jgi|Araly1|922541|scaffold_103822.1 Length=431 Score = 303 bits (164), Expect = 3e-81 Identities = 263/308 (85%), Gaps = 18/308 (6%) Strand=Plus/Plus Query 1899 GCTTTCGATGGGGATGATGCAACCACCACCTATGGCTGAGATGCCTCCTCCTCCACCACC 1958 |||||| |||||||||||| | |||||| ||||| |||| ||||||||||| |||||||| Sbjct 18 GCTTTCAATGGGGATGATGGACCCACCATCTATGCCTGAAATGCCTCCTCCACCACCACC 77 Query 1959 CGGGGAGGCACCACCGCCTCTTCCTGAGGAGCCAGAGCCAAAAAGACAGAAGCTCGATGA 2018 |||||||||||||||||||| |||||||||||||||||||| ||||| ||| | ||||| Sbjct 78 CGGGGAGGCACCACCGCCTCAACCTGAGGAGCCAGAGCCAAAGAGACAAAAGTTAGATGA 137 Query 2019 GTCAGCCCTTGTTCCAGAAGACCAGTTTCTTGCTCAGCATCCGGGTCCGGCTACAATCAG 2078 |||||| ||||||||||||||||| |||||| |||| ||||||| | ||| | | Sbjct 138 GTCAGCACTTGTTCCAGAAGACCAATTTCTTTCTCAACATCCGG-T-----TAC--T-A- 187 Query 2079 GGTTTCTAAGCCAAACGAGAATGATGGACAAGTCATGGAGATCACAGTGCAGTCGTTATC 2138 | |||||||| | |||||||||| | ||| ||||||| ||||||| ||||||| Sbjct 188 -------A-GCCAAACGTGGATGATGGACATGACATTGAGATCATAGTGCAGCCGTTATC 239 Query 2139 CGAAAACGTGGGAAGTTTGAAGGAGAAAATAGCTGGGGAAATGCAAATTCCAGCAAACAA 2198 ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| Sbjct 240 TGAAAACGTGGGAAGTTTGAAGGAGAAAATAGTTGGGGAGATGCAAATTCCAGCAAACAA 299 Query 2199 ACAGAAGT 2206 |||||||| Sbjct 300 ACAGAAGT 307 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 83112914590 Database: halleri_transcript_ahg.fa Posted date: Sep 25, 2014 2:02 AM Number of letters in database: 38,939,717 Number of sequences in database: 32,672 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5